View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17202_high_48 (Length: 209)
Name: NF17202_high_48
Description: NF17202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17202_high_48 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 24914062 - 24914256
Alignment:
| Q |
14 |
aatatagatataagattgaaaaccagtaatagaacattgattatgacataacaaaggagattatttttatgtacaataggtttaacaaaatcagttcaga |
113 |
Q |
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| T |
24914062 |
aatatagatataagattgaaaaccagtaatagaacattgattatgacataacaaaggagattattttcatgtacaataggtttaactaaatcagttcaga |
24914161 |
T |
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| Q |
114 |
tcaaaaacagcaagatttacctttgttgaattaaaagtctcaatagaagcaagatttccatcgatgaaactcaagagatgtttgttatgctccaat |
209 |
Q |
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| T |
24914162 |
tc-aaaacagcaagatttaccttcgttgaattaaaagtctcaatagaagcaagatttccatcgattaaacttaagagctgtttgttgtgctccaat |
24914256 |
T |
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