View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17203_high_45 (Length: 389)

Name: NF17203_high_45
Description: NF17203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17203_high_45
NF17203_high_45
[»] chr7 (72 HSPs)
chr7 (108-363)||(39117378-39117632)
chr7 (108-335)||(32345752-32345979)
chr7 (108-331)||(36446991-36447214)
chr7 (108-335)||(19906424-19906649)
chr7 (164-335)||(6521883-6522054)
chr7 (118-334)||(26963499-26963715)
chr7 (118-336)||(31416667-31416885)
chr7 (118-334)||(10684748-10684964)
chr7 (118-335)||(42043903-42044113)
chr7 (108-338)||(36836069-36836310)
chr7 (108-334)||(42259468-42259691)
chr7 (108-288)||(30514983-30515163)
chr7 (108-260)||(1103494-1103644)
chr7 (250-338)||(35777969-35778057)
chr7 (250-334)||(44453283-44453367)
chr7 (108-331)||(17869247-17869468)
chr7 (250-331)||(48684873-48684954)
chr7 (108-335)||(40298857-40299073)
chr7 (250-332)||(29530854-29530936)
chr7 (108-238)||(34002148-34002276)
chr7 (174-335)||(42121618-42121777)
chr7 (250-335)||(1742141-1742226)
chr7 (253-334)||(16564720-16564801)
chr7 (253-334)||(16600861-16600942)
chr7 (250-335)||(37815874-37815959)
chr7 (230-338)||(19276531-19276638)
chr7 (251-335)||(45933505-45933589)
chr7 (250-335)||(23935571-23935656)
chr7 (250-334)||(7795160-7795244)
chr7 (250-334)||(23155379-23155463)
chr7 (250-334)||(27935917-27936001)
chr7 (250-330)||(42879855-42879935)
chr7 (164-263)||(34733377-34733472)
chr7 (164-332)||(48838601-48838772)
chr7 (174-238)||(22627369-22627431)
chr7 (118-255)||(41905933-41906067)
chr7 (250-338)||(10599513-10599601)
chr7 (246-334)||(27947418-27947506)
chr7 (108-224)||(5723013-5723126)
chr7 (252-334)||(8334211-8334293)
chr7 (250-324)||(24680278-24680352)
chr7 (175-281)||(29001536-29001642)
chr7 (250-331)||(13405047-13405128)
chr7 (243-338)||(36915512-36915607)
chr7 (108-238)||(3680938-3681066)
chr7 (174-334)||(33056203-33056362)
chr7 (108-215)||(26527435-26527540)
chr7 (250-331)||(22298146-22298232)
chr7 (253-334)||(31418430-31418511)
chr7 (152-224)||(33845439-33845509)
chr7 (108-224)||(30833123-30833237)
chr7 (188-243)||(19277055-19277110)
chr7 (108-215)||(19920310-19920415)
chr7 (190-341)||(32275285-32275436)
chr7 (164-311)||(47272217-47272362)
chr7 (108-199)||(19288400-19288491)
chr7 (14-56)||(39117671-39117713)
chr7 (186-255)||(28044139-28044208)
chr7 (250-326)||(41137878-41137954)
chr7 (250-334)||(45948547-45948631)
chr7 (162-224)||(18733519-18733579)
chr7 (277-334)||(5723163-5723220)
chr7 (190-255)||(18886735-18886800)
chr7 (251-308)||(36808085-36808142)
chr7 (193-262)||(40207381-40207450)
chr7 (186-235)||(42010593-42010642)
chr7 (305-335)||(716023-716053)
chr7 (305-335)||(43813507-43813537)
chr7 (305-338)||(8603931-8603964)
chr7 (305-334)||(18733415-18733444)
chr7 (289-334)||(40207306-40207351)
chr7 (289-334)||(40339647-40339692)
[»] chr3 (94 HSPs)
chr3 (108-334)||(54933122-54933348)
chr3 (108-335)||(54261425-54261652)
chr3 (108-338)||(25722374-25722604)
chr3 (149-341)||(2988520-2988712)
chr3 (149-341)||(43687793-43687985)
chr3 (108-335)||(20512412-20512640)
chr3 (108-331)||(36541501-36541724)
chr3 (108-326)||(32303830-32304048)
chr3 (110-343)||(53560677-53560909)
chr3 (108-335)||(43169344-43169571)
chr3 (149-332)||(51381773-51381958)
chr3 (108-334)||(44645348-44645575)
chr3 (108-336)||(42006977-42007204)
chr3 (108-320)||(83306-83515)
chr3 (117-331)||(647514-647726)
chr3 (108-338)||(49470799-49471012)
chr3 (174-330)||(27483116-27483270)
chr3 (250-331)||(33193950-33194031)
chr3 (250-335)||(47895259-47895344)
chr3 (197-338)||(52201839-52201980)
chr3 (250-330)||(45213642-45213722)
chr3 (250-335)||(51398160-51398245)
chr3 (186-334)||(2567931-2568079)
chr3 (250-334)||(41850531-41850615)
chr3 (188-335)||(44648328-44648476)
chr3 (177-335)||(2662412-2662568)
chr3 (108-255)||(37225593-37225738)
chr3 (108-263)||(38457470-38457623)
chr3 (174-334)||(25061771-25061927)
chr3 (108-261)||(46363002-46363154)
chr3 (250-331)||(3152726-3152807)
chr3 (250-335)||(30431270-30431354)
chr3 (251-335)||(31853477-31853561)
chr3 (250-338)||(38363941-38364029)
chr3 (118-333)||(43580495-43580712)
chr3 (250-335)||(2458158-2458243)
chr3 (250-335)||(23525231-23525316)
chr3 (250-335)||(53200596-53200681)
chr3 (118-334)||(44854335-44854547)
chr3 (209-331)||(10351935-10352057)
chr3 (152-224)||(4391958-4392028)
chr3 (186-335)||(31290892-31291040)
chr3 (250-335)||(35557668-35557753)
chr3 (250-335)||(41287411-41287496)
chr3 (118-230)||(27027753-27027863)
chr3 (250-334)||(47138115-47138199)
chr3 (162-224)||(3000817-3000877)
chr3 (166-262)||(27039395-27039490)
chr3 (110-224)||(35099395-35099507)
chr3 (250-332)||(39359070-39359152)
chr3 (250-334)||(45566949-45567030)
chr3 (174-238)||(1340944-1341006)
chr3 (186-263)||(35239447-35239524)
chr3 (250-331)||(36729691-36729772)
chr3 (174-335)||(40048952-40049109)
chr3 (250-338)||(44676371-44676459)
chr3 (250-330)||(45391878-45391958)
chr3 (174-255)||(26965506-26965585)
chr3 (174-235)||(36771594-36771653)
chr3 (202-327)||(38165587-38165712)
chr3 (266-331)||(51482102-51482167)
chr3 (250-333)||(38016524-38016607)
chr3 (110-226)||(50420271-50420384)
chr3 (164-224)||(15514754-15514812)
chr3 (250-303)||(30426270-30426323)
chr3 (151-234)||(5244638-5244719)
chr3 (250-334)||(36460955-36461039)
chr3 (108-235)||(22730935-22731067)
chr3 (174-255)||(34059943-34060020)
chr3 (174-224)||(43599859-43599907)
chr3 (186-224)||(16240662-16240700)
chr3 (188-334)||(42740311-42740456)
chr3 (186-255)||(790158-790227)
chr3 (243-335)||(6937836-6937926)
chr3 (251-332)||(11393696-11393777)
chr3 (186-255)||(19552617-19552686)
chr3 (278-335)||(38277930-38277987)
chr3 (246-335)||(42857009-42857098)
chr3 (277-330)||(42940155-42940208)
chr3 (188-220)||(41287166-41287198)
chr3 (118-238)||(43600206-43600323)
chr3 (307-338)||(50038333-50038364)
chr3 (261-344)||(50088222-50088305)
chr3 (305-335)||(2662639-2662669)
chr3 (188-334)||(4476281-4476425)
chr3 (186-224)||(22414840-22414878)
chr3 (200-334)||(43736790-43736922)
chr3 (305-338)||(30186380-30186413)
chr3 (108-141)||(34059886-34059919)
chr3 (108-141)||(52202401-52202434)
chr3 (186-238)||(53716091-53716141)
chr3 (246-334)||(16240713-16240801)
chr3 (305-345)||(19115338-19115378)
chr3 (250-286)||(36381336-36381372)
[»] chr4 (88 HSPs)
chr4 (108-334)||(24259617-24259843)
chr4 (108-335)||(34124301-34124528)
chr4 (108-338)||(17499633-17499863)
chr4 (119-334)||(45889580-45889795)
chr4 (108-335)||(47321150-47321378)
chr4 (108-335)||(31941564-31941788)
chr4 (118-334)||(28116261-28116477)
chr4 (108-334)||(19282330-19282556)
chr4 (108-334)||(55126503-55126729)
chr4 (108-352)||(4408080-4408324)
chr4 (108-335)||(51434176-51434403)
chr4 (185-341)||(54233899-54234055)
chr4 (108-334)||(6462015-6462246)
chr4 (121-330)||(30022087-30022293)
chr4 (153-334)||(34096067-34096246)
chr4 (181-326)||(34534021-34534166)
chr4 (250-335)||(1819712-1819797)
chr4 (250-335)||(18430139-18430224)
chr4 (250-335)||(40345269-40345354)
chr4 (250-335)||(52957712-52957797)
chr4 (250-335)||(37654560-37654645)
chr4 (250-334)||(2728321-2728405)
chr4 (118-262)||(19849100-19849242)
chr4 (174-324)||(34360077-34360225)
chr4 (250-335)||(24941030-24941115)
chr4 (250-331)||(27653824-27653905)
chr4 (250-335)||(38991685-38991770)
chr4 (250-335)||(42605722-42605807)
chr4 (250-334)||(2493252-2493336)
chr4 (250-334)||(29519448-29519532)
chr4 (250-334)||(53814420-53814504)
chr4 (119-334)||(22212358-22212571)
chr4 (184-287)||(55548187-55548290)
chr4 (152-332)||(42672439-42672617)
chr4 (117-331)||(36805376-36805580)
chr4 (246-330)||(49089609-49089693)
chr4 (251-335)||(50623235-50623319)
chr4 (108-224)||(30492734-30492849)
chr4 (108-263)||(37445666-37445819)
chr4 (108-263)||(45520451-45520603)
chr4 (262-335)||(34316382-34316455)
chr4 (250-335)||(49080399-49080484)
chr4 (250-335)||(52847976-52848061)
chr4 (108-224)||(31987310-31987424)
chr4 (251-335)||(39984968-39985052)
chr4 (118-255)||(44855258-44855395)
chr4 (251-326)||(28734749-28734824)
chr4 (175-335)||(56556200-56556355)
chr4 (161-230)||(29289917-29289984)
chr4 (250-335)||(19878798-19878883)
chr4 (118-237)||(35928507-35928622)
chr4 (175-338)||(32140904-32141065)
chr4 (250-334)||(40010795-40010879)
chr4 (250-330)||(44571792-44571872)
chr4 (250-338)||(45043507-45043595)
chr4 (250-334)||(56373498-56373582)
chr4 (250-312)||(29370753-29370815)
chr4 (186-263)||(15501147-15501224)
chr4 (250-319)||(20448189-20448258)
chr4 (153-263)||(38761819-38761925)
chr4 (186-263)||(39671099-39671176)
chr4 (118-238)||(6510134-6510252)
chr4 (186-238)||(21045215-21045267)
chr4 (186-262)||(52732673-52732749)
chr4 (251-334)||(54042105-54042189)
chr4 (250-335)||(41920231-41920316)
chr4 (186-255)||(51930658-51930727)
chr4 (186-238)||(43421142-43421194)
chr4 (153-224)||(54092009-54092078)
chr4 (186-224)||(11835187-11835225)
chr4 (175-255)||(31817200-31817279)
chr4 (188-226)||(50072341-50072379)
chr4 (174-238)||(54512095-54512157)
chr4 (309-341)||(24259560-24259592)
chr4 (251-334)||(19930865-19930947)
chr4 (244-335)||(29840195-29840286)
chr4 (279-334)||(32140798-32140853)
chr4 (163-221)||(45049770-45049826)
chr4 (108-215)||(45903446-45903551)
chr4 (152-194)||(29840126-29840168)
chr4 (186-224)||(38692472-38692510)
chr4 (250-300)||(52253998-52254048)
chr4 (108-141)||(39671194-39671227)
chr4 (309-338)||(51434426-51434455)
chr4 (269-334)||(54092114-54092179)
chr4 (164-215)||(3093411-3093460)
chr4 (279-335)||(30492895-30492951)
chr4 (262-334)||(40837292-40837362)
[»] chr5 (67 HSPs)
chr5 (108-334)||(42329463-42329689)
chr5 (108-335)||(29653430-29653657)
chr5 (153-334)||(27652238-27652419)
chr5 (108-341)||(4833548-4833776)
chr5 (108-335)||(33822419-33822646)
chr5 (108-326)||(793531-793749)
chr5 (168-335)||(36296050-36296217)
chr5 (118-331)||(33584897-33585108)
chr5 (108-331)||(36660437-36660656)
chr5 (162-330)||(32962931-32963098)
chr5 (149-335)||(29044770-29044950)
chr5 (108-335)||(34171174-34171391)
chr5 (108-335)||(166567-166792)
chr5 (149-331)||(4751452-4751632)
chr5 (188-335)||(43257779-43257925)
chr5 (250-335)||(26660904-26660989)
chr5 (250-335)||(26932497-26932582)
chr5 (149-331)||(4742188-4742368)
chr5 (250-332)||(42661861-42661943)
chr5 (250-335)||(34972568-34972653)
chr5 (250-335)||(42103981-42104066)
chr5 (118-335)||(36783375-36783590)
chr5 (250-335)||(39566333-39566418)
chr5 (250-334)||(2729705-2729789)
chr5 (250-330)||(42977996-42978076)
chr5 (250-332)||(39730096-39730178)
chr5 (250-335)||(8336325-8336410)
chr5 (108-334)||(39059816-39060034)
chr5 (174-338)||(12167525-12167688)
chr5 (250-334)||(21375569-21375653)
chr5 (250-334)||(39504875-39504959)
chr5 (251-334)||(6519128-6519211)
chr5 (250-338)||(3305923-3306012)
chr5 (251-323)||(14620424-14620496)
chr5 (108-335)||(15400181-15400407)
chr5 (108-224)||(38982174-38982288)
chr5 (108-214)||(13066723-13066827)
chr5 (261-335)||(27600555-27600629)
chr5 (212-326)||(34919847-34919961)
chr5 (260-329)||(34445952-34446021)
chr5 (250-326)||(14006042-14006118)
chr5 (243-335)||(15567056-15567148)
chr5 (108-224)||(27810356-27810470)
chr5 (108-238)||(31557356-31557478)
chr5 (118-229)||(28640102-28640211)
chr5 (193-335)||(14979969-14980111)
chr5 (275-335)||(21319246-21319306)
chr5 (186-238)||(31889805-31889857)
chr5 (118-213)||(4371383-4371476)
chr5 (108-214)||(12992074-12992176)
chr5 (163-224)||(32690760-32690819)
chr5 (164-221)||(1513043-1513100)
chr5 (198-335)||(4967409-4967546)
chr5 (250-335)||(29807232-29807317)
chr5 (250-335)||(39335121-39335206)
chr5 (279-335)||(24436458-24436514)
chr5 (188-334)||(33693819-33693964)
chr5 (186-334)||(8960954-8961101)
chr5 (174-351)||(16886152-16886320)
chr5 (188-235)||(4011678-4011725)
chr5 (284-335)||(7145032-7145083)
chr5 (262-336)||(13761880-13761954)
chr5 (277-335)||(21375487-21375545)
chr5 (266-331)||(34208852-34208918)
chr5 (307-335)||(7316988-7317016)
chr5 (307-335)||(15566458-15566486)
chr5 (305-341)||(36164843-36164879)
[»] chr1 (85 HSPs)
chr1 (118-332)||(44582699-44582913)
chr1 (108-335)||(254829-255057)
chr1 (108-334)||(28200141-28200368)
chr1 (108-344)||(26252127-26252363)
chr1 (108-335)||(2459017-2459240)
chr1 (110-334)||(5854143-5854367)
chr1 (110-335)||(42650167-42650391)
chr1 (108-333)||(22664948-22665169)
chr1 (175-332)||(50591239-50591396)
chr1 (186-330)||(49894867-49895011)
chr1 (149-326)||(672209-672383)
chr1 (108-335)||(11134378-11134604)
chr1 (172-334)||(9552276-9552436)
chr1 (118-331)||(28751330-28751541)
chr1 (108-320)||(44024554-44024766)
chr1 (112-293)||(17806335-17806514)
chr1 (108-334)||(5317496-5317720)
chr1 (175-326)||(9333160-9333305)
chr1 (175-326)||(9356933-9357078)
chr1 (118-333)||(17919741-17919953)
chr1 (108-326)||(12002255-12002471)
chr1 (175-332)||(24040945-24041100)
chr1 (186-331)||(84440-84585)
chr1 (108-255)||(11650067-11650212)
chr1 (181-325)||(37437331-37437476)
chr1 (250-335)||(49468627-49468712)
chr1 (119-236)||(2245806-2245923)
chr1 (250-338)||(32806851-32806939)
chr1 (161-335)||(50349775-50349953)
chr1 (250-334)||(5463725-5463809)
chr1 (175-254)||(38132189-38132268)
chr1 (186-341)||(43755113-43755267)
chr1 (250-334)||(10842930-10843014)
chr1 (250-338)||(31491683-31491771)
chr1 (250-334)||(35847853-35847937)
chr1 (250-334)||(44108751-44108835)
chr1 (250-341)||(1740550-1740641)
chr1 (250-332)||(15573763-15573845)
chr1 (246-335)||(38530755-38530844)
chr1 (190-335)||(48259781-48259926)
chr1 (250-334)||(49426336-49426420)
chr1 (250-332)||(25151960-25152042)
chr1 (108-334)||(40719024-40719248)
chr1 (108-238)||(52403485-52403613)
chr1 (250-335)||(9915594-9915679)
chr1 (174-334)||(30006205-30006363)
chr1 (250-335)||(48009160-48009245)
chr1 (108-224)||(45377179-45377293)
chr1 (198-334)||(45749418-45749554)
chr1 (186-335)||(48319923-48320067)
chr1 (108-239)||(15698765-15698894)
chr1 (153-238)||(1428920-1429003)
chr1 (250-332)||(15823184-15823266)
chr1 (250-332)||(43358133-43358215)
chr1 (246-335)||(6377204-6377293)
chr1 (246-287)||(24611483-24611524)
chr1 (108-215)||(50158345-50158450)
chr1 (250-334)||(52125053-52125137)
chr1 (243-330)||(40717283-40717370)
chr1 (276-334)||(12851907-12851965)
chr1 (149-238)||(43929735-43929821)
chr1 (166-326)||(6332234-6332392)
chr1 (186-263)||(43105592-43105669)
chr1 (266-335)||(48025170-48025239)
chr1 (186-238)||(1430552-1430604)
chr1 (188-224)||(10690984-10691020)
chr1 (276-335)||(13408252-13408311)
chr1 (250-329)||(50094380-50094459)
chr1 (277-335)||(4471325-4471383)
chr1 (251-300)||(43759483-43759532)
chr1 (250-335)||(46046123-46046208)
chr1 (279-335)||(33087506-33087562)
chr1 (250-293)||(7213997-7214040)
chr1 (284-331)||(17805766-17805813)
chr1 (307-341)||(14373576-14373610)
chr1 (289-331)||(30686823-30686865)
chr1 (307-337)||(38646135-38646165)
chr1 (250-340)||(46286729-46286819)
chr1 (277-334)||(11066199-11066256)
chr1 (265-334)||(34110692-34110761)
chr1 (108-224)||(12851750-12851864)
chr1 (283-331)||(15646995-15647043)
chr1 (307-335)||(17919985-17920013)
chr1 (250-286)||(31798740-31798776)
chr1 (307-335)||(44024505-44024533)
[»] chr2 (60 HSPs)
chr2 (108-341)||(775796-776028)
chr2 (149-335)||(25332620-25332806)
chr2 (108-335)||(43388575-43388800)
chr2 (108-332)||(33093377-33093600)
chr2 (118-338)||(4566036-4566256)
chr2 (108-338)||(2459782-2460012)
chr2 (175-332)||(14698064-14698221)
chr2 (108-327)||(39866596-39866816)
chr2 (118-332)||(10580777-10580991)
chr2 (118-274)||(41984437-41984594)
chr2 (108-334)||(7743410-7743634)
chr2 (186-334)||(34225835-34225983)
chr2 (251-335)||(16807435-16807519)
chr2 (251-335)||(16846716-16846800)
chr2 (122-335)||(36360293-36360502)
chr2 (250-344)||(12342243-12342337)
chr2 (250-335)||(4133172-4133257)
chr2 (108-335)||(40987200-40987414)
chr2 (250-326)||(38926756-38926832)
chr2 (250-335)||(42743178-42743261)
chr2 (250-335)||(441149-441234)
chr2 (250-331)||(29396602-29396683)
chr2 (250-331)||(29808963-29809044)
chr2 (250-335)||(36106321-36106406)
chr2 (250-334)||(25383404-25383488)
chr2 (123-260)||(37106886-37107023)
chr2 (250-334)||(42753897-42753981)
chr2 (108-255)||(4840725-4840870)
chr2 (250-343)||(18717226-18717319)
chr2 (250-335)||(32227929-32228014)
chr2 (250-334)||(8774202-8774286)
chr2 (250-334)||(8789349-8789433)
chr2 (186-338)||(14378163-14378315)
chr2 (118-334)||(24775208-24775422)
chr2 (243-335)||(38809841-38809933)
chr2 (118-255)||(43460792-43460927)
chr2 (108-255)||(1298778-1298923)
chr2 (250-335)||(12393837-12393922)
chr2 (250-335)||(30855255-30855340)
chr2 (246-335)||(13562140-13562228)
chr2 (164-256)||(16316774-16316864)
chr2 (108-224)||(1360186-1360300)
chr2 (175-238)||(4766227-4766288)
chr2 (108-224)||(4536583-4536694)
chr2 (174-238)||(40410518-40410580)
chr2 (186-334)||(4766136-4766279)
chr2 (174-337)||(29795115-29795276)
chr2 (276-334)||(45081825-45081883)
chr2 (166-263)||(11171808-11171905)
chr2 (174-263)||(1381816-1381901)
chr2 (251-286)||(6220371-6220406)
chr2 (188-235)||(42969977-42970024)
chr2 (149-263)||(43344213-43344325)
chr2 (251-281)||(19636659-19636689)
chr2 (251-281)||(19835252-19835282)
chr2 (265-334)||(42005055-42005124)
chr2 (283-335)||(44228648-44228701)
chr2 (186-238)||(45147991-45148044)
chr2 (251-287)||(34546114-34546150)
chr2 (307-335)||(37724207-37724235)
[»] scaffold0047 (1 HSPs)
scaffold0047 (108-334)||(70372-70598)
[»] chr8 (55 HSPs)
chr8 (108-332)||(34461503-34461728)
chr8 (175-332)||(8471333-8471490)
chr8 (108-330)||(14541669-14541889)
chr8 (108-330)||(18673022-18673243)
chr8 (108-335)||(34168130-34168349)
chr8 (151-334)||(27416551-27416736)
chr8 (108-310)||(13108997-13109198)
chr8 (108-335)||(9022404-9022630)
chr8 (250-334)||(4760478-4760562)
chr8 (166-330)||(32271575-32271738)
chr8 (165-334)||(32326644-32326811)
chr8 (108-238)||(7612507-7612635)
chr8 (108-286)||(35052480-35052657)
chr8 (108-334)||(8382406-8382621)
chr8 (108-331)||(22601145-22601365)
chr8 (189-335)||(38328973-38329118)
chr8 (250-335)||(39463407-39463492)
chr8 (108-260)||(11257551-11257699)
chr8 (118-224)||(3095533-3095637)
chr8 (108-238)||(27109836-27109964)
chr8 (250-335)||(9880419-9880504)
chr8 (108-335)||(36915376-36915599)
chr8 (250-326)||(31899175-31899251)
chr8 (120-224)||(32661326-32661428)
chr8 (250-334)||(40228724-40228808)
chr8 (250-338)||(43084542-43084630)
chr8 (250-334)||(43448866-43448950)
chr8 (246-327)||(31693545-31693626)
chr8 (250-331)||(39698588-39698669)
chr8 (243-335)||(11168826-11168918)
chr8 (186-335)||(6839292-6839441)
chr8 (118-263)||(30788954-30789097)
chr8 (188-323)||(45187226-45187361)
chr8 (252-326)||(4989630-4989704)
chr8 (186-238)||(7129362-7129414)
chr8 (186-238)||(11336048-11336100)
chr8 (250-341)||(29025661-29025752)
chr8 (149-238)||(5044242-5044329)
chr8 (250-337)||(7839608-7839692)
chr8 (250-335)||(9304552-9304637)
chr8 (250-335)||(17921107-17921192)
chr8 (164-224)||(43938186-43938244)
chr8 (186-330)||(39970410-39970545)
chr8 (250-302)||(44713684-44713736)
chr8 (108-235)||(5588485-5588617)
chr8 (186-221)||(26439051-26439086)
chr8 (186-224)||(16209026-16209064)
chr8 (188-334)||(41414920-41415065)
chr8 (186-236)||(41790158-41790208)
chr8 (289-334)||(4530055-4530100)
chr8 (194-238)||(1774086-1774130)
chr8 (279-335)||(8106806-8106862)
chr8 (175-262)||(18666536-18666621)
chr8 (168-224)||(37185680-37185734)
chr8 (186-222)||(156314-156350)
[»] chr6 (35 HSPs)
chr6 (118-335)||(17345056-17345269)
chr6 (108-330)||(34576553-34576771)
chr6 (108-323)||(26189517-26189733)
chr6 (108-334)||(25932637-25932864)
chr6 (118-326)||(12828608-12828814)
chr6 (108-303)||(6140609-6140803)
chr6 (206-329)||(6992508-6992631)
chr6 (108-303)||(6143093-6143288)
chr6 (250-335)||(10520308-10520393)
chr6 (250-338)||(1135075-1135163)
chr6 (108-263)||(29927216-29927370)
chr6 (108-335)||(31275559-31275785)
chr6 (108-238)||(29915550-29915679)
chr6 (250-335)||(23259243-23259328)
chr6 (108-215)||(32258731-32258838)
chr6 (250-332)||(19675128-19675210)
chr6 (108-341)||(26669010-26669241)
chr6 (108-263)||(4123846-4123998)
chr6 (251-334)||(24163632-24163716)
chr6 (166-254)||(10494760-10494847)
chr6 (118-238)||(23936599-23936715)
chr6 (264-334)||(29713325-29713395)
chr6 (108-235)||(34439427-34439556)
chr6 (162-224)||(8052407-8052467)
chr6 (118-221)||(30627110-30627211)
chr6 (271-332)||(234196-234257)
chr6 (118-224)||(11785132-11785235)
chr6 (250-334)||(24555845-24555930)
chr6 (260-334)||(34513577-34513651)
chr6 (174-238)||(1924689-1924751)
chr6 (279-335)||(30627260-30627316)
chr6 (108-184)||(4132042-4132118)
chr6 (149-215)||(19689874-19689938)
chr6 (108-141)||(1924774-1924807)
chr6 (246-287)||(10540442-10540483)
[»] scaffold0003 (1 HSPs)
scaffold0003 (108-326)||(321735-321953)
[»] scaffold0072 (1 HSPs)
scaffold0072 (186-335)||(12000-12148)
[»] scaffold0078 (1 HSPs)
scaffold0078 (253-338)||(1363-1448)
[»] scaffold0048 (1 HSPs)
scaffold0048 (250-326)||(62783-62859)
[»] scaffold0758 (1 HSPs)
scaffold0758 (254-334)||(6246-6326)
[»] scaffold0110 (1 HSPs)
scaffold0110 (250-334)||(24659-24743)
[»] scaffold0015 (1 HSPs)
scaffold0015 (250-335)||(20999-21084)
[»] scaffold0238 (1 HSPs)
scaffold0238 (118-262)||(16031-16172)
[»] scaffold0519 (1 HSPs)
scaffold0519 (149-221)||(7732-7802)
[»] scaffold0119 (1 HSPs)
scaffold0119 (108-341)||(1552-1783)
[»] scaffold0886 (1 HSPs)
scaffold0886 (149-263)||(4098-4211)
[»] scaffold0194 (1 HSPs)
scaffold0194 (108-215)||(8167-8274)
[»] scaffold0007 (2 HSPs)
scaffold0007 (153-224)||(158154-158223)
scaffold0007 (276-334)||(158265-158322)
[»] scaffold0060 (1 HSPs)
scaffold0060 (279-342)||(31722-31785)
[»] scaffold0189 (1 HSPs)
scaffold0189 (118-224)||(13088-13192)
[»] scaffold0009 (1 HSPs)
scaffold0009 (277-330)||(62993-63046)
[»] scaffold2107 (1 HSPs)
scaffold2107 (250-298)||(339-387)
[»] scaffold0565 (1 HSPs)
scaffold0565 (283-335)||(9578-9630)


Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 108 - 363
Target Start/End: Complemental strand, 39117632 - 39117378
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||    
T  39117632 tgaatgtcgttttacattttcaatacaactttaattattttcttccaacattaccctcaatgaatactccaa-ttttctctctcacacaattttcaatgc 39117534  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39117533 aactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattccattctttaatctgtgtgcaagtgg 39117434  T
Q  308 ctaaagcgacactcattttaaaacggagagaataaaaggtaaaacaagaagtaaaa 363  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  39117433 ataaagcgacactcattttaaaacggagggaataaaaggtaaaacaagaaggaaaa 39117378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 32345979 - 32345752
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| |||||||||||||| |||||||||       |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  32345979 tgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatac 32345880  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||| |||    
T  32345879 aactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattgg 32345780  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||| ||||||||    
T  32345779 ctaaagcgacactcattttgaaacggag 32345752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 108 - 331
Target Start/End: Complemental strand, 36447214 - 36446991
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| ||||||||||||||||||| |||||       |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  36447214 tgaatgtcattttacattttcaatacaattttaatttttctcttccaactttatcctcattaaatactccaacttttctctctcacacaattttcaatgc 36447115  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||| |||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| ||     
T  36447114 aactttaagcttgtcttattcttataaagtaatgttattttagtaaaattgctatgacatttgactactttattccattcattaatttgtgtgcaattgt 36447015  T
Q  308 ctaaagcgacactcattttaaaac 331  Q
    ||||||| ||||||||||||||||    
T  36447014 ctaaagcaacactcattttaaaac 36446991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 19906424 - 19906649
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||| |||||||||||| |       |||||||| ||| |||||||||||| ||||||||||||||||||||  |||||||||||    
T  19906424 tgaatgtcgctttacatttccaatacaacttttatttttttcttccaactttaccctcaataaatattccaacttttctctctcaca--attttcaatgc 19906521  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||  ||||||| |||    
T  19906522 aactttaagtttgtcttgttcctataaagtaaggttattttagtaaaattgctatgacatttgactattttattccattccttaatccatgtgcaattgg 19906621  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||| ||||||||    
T  19906622 ctaaagcgacactcattttgaaacggag 19906649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 164 - 335
Target Start/End: Original strand, 6521883 - 6522054
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    ||||||||||||| || ||  ||||||||||||||||||||| ||| |||||||||||||| || |||||||||| ||||||||||||| ||||||||||    
T  6521883 tcaataaatactcaaatttccctctctcacacaattttcaatacaattttaagtttgtctttttcttataaagtaaggttattttagtataattgttatg 6521982  T
Q  264 acatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  6521983 acatttgactactttatttcattccttaatttgtgtgcaattggctaaagcgacactcattttaaaacggag 6522054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 118 - 334
Target Start/End: Original strand, 26963499 - 26963715
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| |||| |||||||||       |||||||| ||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26963499 tttacatttccaatgcaactttaatttttttcttccaactttaccctcaatgaatactccaacttttctctctcacataattttcaatgcaactttaagt 26963598  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||  ||||| |||||| || ||| |||||| ||    
T  26963599 ttgtctttttcttataaagtaaggttattttagtaaaattgttatgacatttgactattttattccatttcttaatttgtgtgtaaatggttaaagcaac 26963698  T
Q  318 actcattttaaaacgga 334  Q
    ||||||||| |||||||    
T  26963699 actcattttgaaacgga 26963715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 118 - 336
Target Start/End: Complemental strand, 31416885 - 31416667
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||||||||||||||||||       |||||||| ||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |    
T  31416885 tttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatacttcaatttttctctctcacacaattttcaatgcaactttaaat 31416786  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| || ||||||| || | ||||||||||||||||||| |||||||||| ||||||||||||||| |||||  |||||||| | ||||||| |||    
T  31416785 ttgtcttgttcttataaaataagattattttagtaaaattgttttgacatttgattactttatttcattccttaattcgtgtgcaattagctaaagtgac 31416686  T
Q  318 actcattttaaaacggaga 336  Q
    | |||||||||||| ||||    
T  31416685 aatcattttaaaacagaga 31416667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 118 - 334
Target Start/End: Complemental strand, 10684964 - 10684748
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||||||| |||||||||       |||||||| ||| ||| |||||||| |  |||||||||||||||||||||||||||| |||||||||||    
T  10684964 tttacattttcaatgcaactttaatttttttcttccaactttacccttaataaatattaaaacttttctctctcacacaattttcaattcaactttaagt 10684865  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||| |||| |||| ||||||| |||| ||||| | |||| || ||  |||| ||||    
T  10684864 ttgtctttttcttataaagtaaggttattttagtaaaattgttatgatatttaactattttattttattccttaatatatgtgtaattgattaaaacgac 10684765  T
Q  318 actcattttaaaacgga 334  Q
    ||| ||||| |||||||    
T  10684764 acttattttgaaacgga 10684748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 118 - 335
Target Start/End: Complemental strand, 42044113 - 42043903
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||||||||||||||||||       |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42044113 tttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaaga 42044014  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    |||       | ||||||||  |||||||||||||||||| || |||||||| |||||||||||| ||   |||||| |||||||| ||||||||  |||    
T  42044013 ttg-------tatataaagttaggttattttagtaaaattattttgacatttaactactttattttatctcttaatccgtgtgcaattggctaaaatgac 42043921  T
Q  318 actcattttaaaacggag 335  Q
     |||||||| ||||||||    
T  42043920 gctcattttgaaacggag 42043903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 108 - 338
Target Start/End: Original strand, 36836069 - 36836310
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||||||||||||||||||       |||||||| ||| ||||| |||| ||||||| |||||||||||||| ||||||||||||    
T  36836069 tgaatgtcgctttacattttcaatacaactttaatttttttcttccaacttta-cctcagtaaacactccaatttttctctctcacataattttcaatgc 36836167  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttga------------ctactttatttcattctttaatct 295  Q
    |||||||| |||||||| ||| |||||||||  |||||||||||||||||| |||||| |||||            | |||||||||||||| ||||||     
T  36836168 aactttaaatttgtcttgtttctataaagtaatgttattttagtaaaattgatatgacgtttgagtaaagtgtgtgcaactttatttcattccttaatcc 36836267  T
Q  296 gtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    |||| ||| |||||||| ||||||| ||||| |||||||||||    
T  36836268 gtgtacaattggctaaaacgacactgattttgaaacggagaga 36836310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 42259691 - 42259468
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||  |||||| ||||||||||||||||||       |||||||| ||| ||||||||||||||| ||||||| ||||  ||| ||||||||||||    
T  42259691 tgaatgttattttacgttttcaatacaactttaatttttt-cttccaactttaccctcaataaatactcaaacttttgtctc--acataattttcaatgc 42259595  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||| ||||||| || |||||||||| ||  |||||||||||| ||||||| |   | | ||  | |||||||||||||||| |||||||| |||    
T  42259594 aactttaagcttgtctttttcttataaagtaagggcattttagtaaaagtgttatgtctaataattatctcatttcattctttaatccgtgtgcaattgg 42259495  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
    ||| ||||||||||||||| |||||||    
T  42259494 ctagagcgacactcattttgaaacgga 42259468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 288
Target Start/End: Original strand, 30514983 - 30515163
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| | ||||||||||||||||||||| ||||||| |||||||| ||| |    
T  30514983 tgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttttctctcagacaattttaaatac 30515082  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattct 288  Q
    |||||||| ||||||||||| ||| |||||| |||||||||| |||||||  ||| ||||| ||||| |||||||| ||||    
T  30515083 aactttaaatttgtcttattcttaaaaagtaaggttattttaataaaattactataacattcgactattttatttccttct 30515163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 1103494 - 1103644
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||| ||||||||||||||       |||||||| ||| |||||||||||||| |||||||||||  |||||||||||||||||     
T  1103494 tgaatgtcattttacatttccaatacaactttaattgttttcttccaactttaccctcaataaatacttcaacttttctc--tcacacaattttcaatgt 1103591  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgtt 260  Q
    |||||||| ||||| || ||||||||||||| || || |||||||||| ||||    
T  1103592 aactttaaatttgttttttttttataaagtaagggtagtttagtaaaaatgtt 1103644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 35777969 - 35778057
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||| |||||||||||||||||||||    
T  35777969 gtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgcaattagctaaagcgatactcattttaaaacggagaga 35778057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 44453283 - 44453367
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  44453283 gtaaaattgttatgacatttgactactttattccattctttaatctgtatgcaattggctaaaacgacactcattttaaaacgga 44453367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 331
Target Start/End: Original strand, 17869247 - 17869468
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||| |||| |||||||||       |||||||| ||| ||||||||||||||| | ||||||||  ||||||||||||||||||    
T  17869247 tgaatgtcattttacatttccaatgcaactttaattttttccttccaactttatcctcaataaatactcaatcttttctc--tcacacaattttcaatgc 17869344  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||| || || ||||||||||  |  | |||| ||||| ||||||| |   ||| || || ||||||||| ||||||||||||||| ||     
T  17869345 aactttaagtttgtatttttcttataaagtaaagacaatttaataaaagtgttatgtctaatgattatttcatttcattccttaatctgtgtgcaattga 17869444  T
Q  308 ctaaagcgacactcattttaaaac 331  Q
    ||||| | ||| ||||||| ||||    
T  17869445 ctaaaacaacattcattttgaaac 17869468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 48684873 - 48684954
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||    
T  48684873 gtaaaattgttatgacatttgactactttatttcattccttaatctgtgtgcaattgattaaagcgacactcattttaaaac 48684954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 40298857 - 40299073
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       || ||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||     
T  40298857 tgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactccaacttttctc--tcacacaattttcaatgt 40298954  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || ||         ||  | |||||||||| ||||||| |   | | || || ||||||||| ||||| ||||||||| |||    
T  40298955 aactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttatgtccaattattatttcatttcattccttaatttgtgtgcaattgg 40299045  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||| ||||||||||||| ||||||||    
T  40299046 ctaaaacgacactcattttgaaacggag 40299073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 29530936 - 29530854
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  29530936 gtaaaattgctatgacatttgactactttattttattccttaatctgtgtgcaattggctaaatcgacactcattttaaaacg 29530854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 34002276 - 34002148
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| |||||||| |||||       |||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  34002276 tgaatgtcactttacatttccaatacaagtttaattttattcttccaactttaccctcaataaatactccaacttttctctc--acacaattttcaatgc 34002179  T
Q  208 aactttaagtttgtcttatttttataaagta 238  Q
    |||||||| |||||||| || ||||||||||    
T  34002178 aactttaattttgtctttttcttataaagta 34002148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 335
Target Start/End: Original strand, 42121618 - 42121777
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    ||||||||||||||||  | |||||||||||||||||||||||| | |||| || | |||||||| ||| | |||||||||| || |||| |   ||| |    
T  42121618 ctccaacttttctctc--aaacaattttcaatgcaactttaagtgtatctttttctaataaagtaaggtcagtttagtaaaagtgatatgtctaatgatt 42121715  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    | || ||||||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  42121716 atttgatttcattccttaatctgtgtgcaattggctaaagcgacactcattttgaaatggag 42121777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 1742141 - 1742226
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  1742141 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggag 1742226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 16564801 - 16564720
Alignment:
Q  253 aaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  16564801 aaattgctatgacatttgactactttatttcattccttaatctgtatgcaattggttaaagcgacactcattttaaaacgga 16564720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 16600861 - 16600942
Alignment:
Q  253 aaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  16600861 aaattgctatgacatttgactactttatttcattccttaatctgtatgcaattggttaaagcgacactcattttaaaacgga 16600942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 37815874 - 37815959
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  37815874 gtaaaattgctatgacatttgactattttattccattctttaatatgtgtgcaattggctaaaacgacactcattttaaaacggag 37815959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 230 - 338
Target Start/End: Complemental strand, 19276638 - 19276531
Alignment:
Q  230 tataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaa 329  Q
    ||||||||| |||||||| |||||| ||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| ||||| ||    
T  19276638 tataaagtaaggttatttaagtaaa-ttgctataacatttgactactttacttcattccttaatctgtgtgcaattggctaaagcgacactgattttgaa 19276540  T
Q  330 acggagaga 338  Q
    | |||||||    
T  19276539 atggagaga 19276531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 45933589 - 45933505
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||| ||||| ||||||||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45933589 taaaattgctatgatatttgactattttattcaattccttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 45933505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 23935571 - 23935656
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| || || ||| ||| |||||||||||||||||||||||||||    
T  23935571 gtaaaattgctatgacatttgactactttattccattctttaatgtgggtacaattgggtaaagcgacactcattttaaaacggag 23935656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 7795244 - 7795160
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||    
T  7795244 gtaaaattgctatgacattttactactttatttcattccttaatttgtgtacaattggctaaagcgacactcattttgaaacgga 7795160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 23155463 - 23155379
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||| |||||||||||  |||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  23155463 gtaaaattgctatgacatttaactactttattcaattctttaatctgtatgcaattggctaaagcgatactcattttaaaacgga 23155379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 27935917 - 27936001
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||| |||||||||||||||  |||| ||||||||||||||  |||||||||||||||||||||| |||||||    
T  27935917 gtaaaattgttatgacttttgactactttattcaattccttaatctgtgtgcagttggctaaagcgacactcattttgaaacgga 27936001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 42879935 - 42879855
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||||||| ||||||||||| |||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  42879935 gtaaaattgctatgacatttgcctactttattccattccttactctgtgtgcaattggctaaagcgacactcattttaaaa 42879855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 34733377 - 34733472
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||||||||||| |||||||||    ||||||||||||||||||||||||||||||| || |||||||||| || || |||||||||| |||||||    
T  34733377 tcaataaatactccaatttttctctc----acaattttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttatg 34733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 332
Target Start/End: Complemental strand, 48838772 - 48838601
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtc-----ttatttttataaagtacggttattttagtaaaattg 258  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||||     |||||||||||||||| ||| | ||||||| || ||    
T  48838772 tcaataaatactcaaacttttctctc--acacaattttcaatgcaactttaaatttgtctttttttatttttataaagtaaggtcagtttagtataaatg 48838675  T
Q  259 ttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||| |   ||| || || |||| |||| ||||| ||||||||| ||| |||| | ||||| |||||||||||    
T  48838674 ttatgtctaatgattatttcattttattccttaatttgtgtgcaattggttaaaacaacacttattttaaaacg 48838601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 22627431 - 22627369
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  22627431 ctccaacttttctctc--acacaattttcaatgcaactttaagtttgtcttatttttataaagta 22627369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 41906067 - 41905933
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||  |||||||||||||       |||||||| ||| |||||||||||||||||||||||||||   |||||||||||||||||||||||| |    
T  41906067 tttacatttctaatacaactttaagttttctcttccaacttta-cctcaataaatactccaacttttctctt--acacaattttcaatgcaactttaatt 41905971  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    ||||||| || |||||||||| ||  | ||||||||||    
T  41905970 ttgtctttttcttataaagtaagggcagtttagtaaaa 41905933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 10599513 - 10599601
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| | ||||||| ||  |||| |||||||||||||||||||||||||    
T  10599513 gtaaaattgctatgacatttgactactttattccattccttaatatatgtgcaattgattaaaacgacactcattttaaaacggagaga 10599601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 334
Target Start/End: Complemental strand, 27947506 - 27947418
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||| ||||||||||||||||||||||  |||| ||||| ||||||||| ||| ||||| |||||||||||| |||||||    
T  27947506 tttagtaaaattgctatgacatttgactactttattcaattcattaatatgtgtgcaattggttaaagtgacactcattttgaaacgga 27947418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 5723013 - 5723126
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       || | ||| ||| ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  5723013 tgaatgtcactttacattttcaatacaactttaatttttt-ctcctaactttaccctcaataaatactcaaacttttctc--tcacacaattttcaatgc 5723109  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||||||||||||    
T  5723110 aactttaagtttgtctt 5723126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 8334293 - 8334211
Alignment:
Q  252 aaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||| |||| ||| |||||| || |||||||||||    
T  8334293 aaaattgttatgacatttgactactttattacatttcttaatctgtgtgcaattggcgaaaacgacacacaatttaaaacgga 8334211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 24680278 - 24680352
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatt 324  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||||| | |||||| |||||||||||    
T  24680278 gtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattagctaaaacgacactcatt 24680352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 29001642 - 29001536
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| || ||  |||||| || | |||||||| |||||||  ||||| |||| ||||    
T  29001642 tccaacttttatttctcacacaattttcaatgcaactttaagtttgttttgttcctataaaataagattattttattaaaatttctatgatatttaacta 29001543  T
Q  275 ctttatt 281  Q
    |||||||    
T  29001542 ctttatt 29001536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 13405128 - 13405047
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||||| || ||||||||||||||||||||||||  ||||| ||||||||| ||| |||| ||||||||||||||||||    
T  13405128 gtaaaattgctacgacatttgactactttatttcatttcttaatatgtgtgcaattggttaaaacgacactcattttaaaac 13405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 36915512 - 36915607
Alignment:
Q  243 tattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||| |||||||||| ||||| |||||||||  | ||| ||||| ||||||| |||| || |||||||| |||||||||||||||||||||||||    
T  36915512 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctatgtgaaaatggctaaaacgacactcattttaaaacggagaga 36915607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 3681066 - 3680938
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| | | ||||||||| | ||||||||||||  ||| |||||| |||||    
T  3681066 tgaatgtcactttacattttcaatacaactttaattttgttcttccaactttaccattaataaatacactaacttttctctc--acagaattttaaatgc 3680969  T
Q  208 aactttaagtttgtcttatttttataaagta 238  Q
    |||||||| |||||||| || ||||||||||    
T  3680968 aactttaaatttgtctttttcttataaagta 3680938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 334
Target Start/End: Complemental strand, 33056362 - 33056203
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttattttta-taaagtacggttattttagtaaaattgttatgacatttgac 272  Q
    ||||||||||||||||  |||||||||||||||||  ||||| |||||||| || ||| ||||||| ||  | |||||||||| |||||||     |||     
T  33056362 ctccaacttttctctc--acacaattttcaatgcagttttaaatttgtctttttcttaataaagtaagggcagtttagtaaaagtgttatgtttaatgat 33056265  T
Q  273 tactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    || || ||||||||| ||||||| ||||||| || ||||| ||||||||||||| |||||||    
T  33056264 tatttcatttcattccttaatctatgtgcaattgactaaaacgacactcattttgaaacgga 33056203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 26527540 - 26527435
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||  |||||||||||||||||||||||||       |||| ||| ||||||||||||||||||||||||||||| |   | | ||||||||||||    
T  26527540 tgaatgttattttacattttcaatacaactttaatttttttcttctaactttaacctcaataaatactccaacttttctgtt--aaataattttcaatgc 26527443  T
Q  208 aactttaa 215  Q
    ||||||||    
T  26527442 aactttaa 26527435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 22298146 - 22298232
Alignment:
Q  250 gtaaaattgttatgacatttgactactttattt-----cattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||||| |||||||||||||||||||| ||     ||||| ||||||||||||||| |||||||| ||||||||||||| ||||    
T  22298146 gtaaaattgctatgacatttgactactttactttattccattccttaatctgtgtgcaattggctaaaacgacactcattttgaaac 22298232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 31418511 - 31418430
Alignment:
Q  253 aaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| |||||||||||||||||||||| ||||  ||||| | ||||||| ||  |||||||||||| |||||||||||||    
T  31418511 aaattgctatgacatttgactactttattccatttcttaatatatgtgcaattgattaaagcgacacttattttaaaacgga 31418430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 33845509 - 33845439
Alignment:
Q  152 ccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    ||||| ||| ||||||||| ||||||||||||| |||| ||||  ||||||||||||||||||||||||||||    
T  33845509 ccaactttaccctcaataattactccaacttttttctcgcaca--attttcaatgcaactttaagtttgtctt 33845439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 30833237 - 30833123
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||| || ||||||||||||||||||||||| |       ||| |||| ||| | ||||||||||||||||||||| ||||  |||||||||||| ||     
T  30833237 tgaatatcattttacattttcaatacaacttttatttttttctttcaactttaccttcaataaatactccaacttttttctc--acacaattttcagtgt 30833140  T
Q  208 aactttaagtttgtctt 224  Q
    |||| ||||||||||||    
T  30833139 aactctaagtttgtctt 30833123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 19277110 - 19277055
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggtt 243  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||    
T  19277110 tctcacacaattttcaatgcaactttaagtttgtcttgttcatataaagtaaggtt 19277055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 19920415 - 19920310
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       ||  |||| ||| ||||||||||||||| |||||||||||| ||||  |||||||||||    
T  19920415 tgaatgtcactttacatttccaatacaactttaatttttttctctcaactttaccctcaataaatactcaaacttttctctcgcaca--attttcaatgc 19920318  T
Q  208 aactttaa 215  Q
    ||||||||    
T  19920317 aactttaa 19920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 341
Target Start/End: Original strand, 32275285 - 32275436
Alignment:
Q  190 tcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctt 289  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||  |  | ||||||||||  || |||     ||| || || ||||||||  |    
T  32275285 tcacacaattttcaatgcaactttaagtttgattttttcttataaagtaaaggcagtttagtaaaaacgtcatgtttaatgattatttcatttcatttct 32275384  T
Q  290 taatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaata 341  Q
    |||| ||||||||| ||| |||| |||| ||||||||||||||||| |||||    
T  32275385 taatatgtgtgcaattggttaaaacgacgctcattttaaaacggagggaata 32275436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 47272217 - 47272362
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||||||| |||||||| || ||||||||||||||||||||| |||| ||||||||| ||  ||||||  | ||  | ||||||||||||||||||    
T  47272217 tcaataaatacttcaactttt-tc-ctcacacaattttcaatgcaattttatgtttgtctttttcatataaaacaagggcagtttagtaaaattgttatg 47272314  T
Q  264 acatttgactactttatttcattctttaatctgtgtgcaagtggctaa 311  Q
         ||  || |  ||||||||||||||||||||||||| |||||||    
T  47272315 tttaatggttattccatttcattctttaatctgtgtgcaattggctaa 47272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 19288491 - 19288400
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaatt 199  Q
    ||||||||  |||||||||  |||||||||||||       |||| ||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  19288491 tgaatgtcactttacatttctaatacaactttaatttttttcttctaactttaccctcaataaattctccaacttttctctctcacacaatt 19288400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 39117713 - 39117671
Alignment:
Q  14 gaagcccaaaaacatgatctgctcgaaggtactcccttcgttt 56  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  39117713 gaagcccaaaaacatgatctgctcgaagatactcccttcgttt 39117671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 28044208 - 28044139
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    |||||||||||||||||||| ||||||||| |||||||| || |||||||||| ||  | ||||||||||    
T  28044208 tctctcacacaattttcaatacaactttaattttgtctttttcttataaagtaagggcagtttagtaaaa 28044139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 41137878 - 41137954
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    ||||||||| |||||||||||||||||||||| |||| |||||| | ||||||| |  |||||  ||||||||||||    
T  41137878 gtaaaattgctatgacatttgactactttattccattttttaatatatgtgcaattcactaaaatgacactcatttt 41137954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 45948631 - 45948547
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| ||||||||||||||||||||||  |||   |||| ||||||  | || ||||| |||||||||||||||||||||    
T  45948631 gtaaaattgctatgacatttgactactttattctatttcgtaatatgtgtgtgattgactaaaacgacactcattttaaaacgga 45948547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 18733519 - 18733579
Alignment:
Q  162 cctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||||||||||||||||| |||| ||||  |||||| ||||||||||||||||| ||||||||    
T  18733519 cctcaataaatactccaatttttttctc--acacaactttcaatgcaactttaaatttgtctt 18733579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 5723163 - 5723220
Alignment:
Q  277 ttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| |||| ||||| ||||||||| || ||||| |||||||||||||||||||||    
T  5723163 ttattttattccttaatttgtgtgcaattgactaaaacgacactcattttaaaacgga 5723220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 18886735 - 18886800
Alignment:
Q  190 tcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    |||||||||||||||||||||||||| |||||||| |  |||||||||| ||  | ||||||||||    
T  18886735 tcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaa 18886800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 36808085 - 36808142
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggc 308  Q
    |||||||| ||||||||||||||||||||||  |||||||||| ||| ||||| ||||    
T  36808085 taaaattgctatgacatttgactactttattatattctttaatatgtatgcaattggc 36808142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 40207450 - 40207381
Alignment:
Q  193 cacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttat 262  Q
    ||||||||||||||||| |||||||||||| | || |||||||||| ||  | |||||||||| ||||||    
T  40207450 cacaattttcaatgcaattttaagtttgtcattttcttataaagtaagggcagtttagtaaaagtgttat 40207381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 42010642 - 42010593
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaa 235  Q
    ||||||| ||||||||||||| ||||||||||||||||| || |||||||    
T  42010642 tctctcatacaattttcaatgtaactttaagtttgtctttttcttataaa 42010593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 335
Target Start/End: Original strand, 716023 - 716053
Alignment:
Q  305 tggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||    
T  716023 tggctaaagcgacactcattttaaaacggag 716053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 335
Target Start/End: Original strand, 43813507 - 43813537
Alignment:
Q  305 tggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||    
T  43813507 tggctaaagcgacactcattttaaaacggag 43813537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 338
Target Start/End: Complemental strand, 8603964 - 8603931
Alignment:
Q  305 tggctaaagcgacactcattttaaaacggagaga 338  Q
    |||||||| |||||||||||||||||||||||||    
T  8603964 tggctaaaacgacactcattttaaaacggagaga 8603931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 334
Target Start/End: Complemental strand, 18733444 - 18733415
Alignment:
Q  305 tggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||||||||||||||    
T  18733444 tggctaaagcgacactcattttaaaacgga 18733415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 40207351 - 40207306
Alignment:
Q  289 ttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||| ||||||||| |||||||||| ||||||||||| |||||||    
T  40207351 ttaatatgtgtgcaattggctaaagcaacactcattttgaaacgga 40207306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 40339647 - 40339692
Alignment:
Q  289 ttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||| |||||||| ||||||  |||||||||||||    
T  40339647 ttaatctgtgtgcaattggctaaaacgacacatattttaaaacgga 40339692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 3e-79; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 54933348 - 54933122
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| |||| |||||||||       |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54933348 tgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatgc 54933249  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||    
T  54933248 aactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattgg 54933149  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||||||||||    
T  54933148 ctaaagcgacactcattttaaaacgga 54933122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 54261425 - 54261652
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||| |||| |||||||||||||| |||||||||       |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| |    
T  54261425 tgaacgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctctcacacaattttcaatac 54261524  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||  |||||||||||| || |||    
T  54261525 aactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgtaattgg 54261624  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||| ||||||||    
T  54261625 ctaaagcgacactcattttgaaacggag 54261652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 108 - 338
Target Start/End: Complemental strand, 25722604 - 25722374
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       ||||  || ||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  25722604 tgaatgtcactttacattttcaatacaactttaatttttttcttcatactttaccctaaataaatactccaacttttctctctcacacaattttcaatgc 25722505  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| |||    
T  25722504 aactttaagtttgtcttattcttgtaaagtaaggttattttagtaaaattgttatgacatttgactactttattccatttcttaatctgtgtgcaattgg 25722405  T
Q  308 ctaaagcgacactcattttaaaacggagaga 338  Q
    ||||| ||| ||| ||||| |||| ||||||    
T  25722404 ctaaatcgatacttattttgaaacagagaga 25722374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 149 - 341
Target Start/End: Complemental strand, 2988712 - 2988520
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  2988712 cttccaactttaccctcaataaatactcaaacttttctctctcgcacaattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttatttt 2988613  T
Q  249 agtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaata 341  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||||||||||||||| |||||||| |||||    
T  2988612 agtaaaattgctatgacatttgactactttattccattccttaatccatgtgcaattggctaaagcgacactcattttgaaacggagggaata 2988520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 149 - 341
Target Start/End: Complemental strand, 43687985 - 43687793
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||||||||| |||||||||    
T  43687985 cttccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatgaaactttaaatttgtcttgttcttataaagtaaggttatttt 43687886  T
Q  249 agtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaata 341  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| || ||||| ||||||| ||||| |||||||| |||||    
T  43687885 agtaaaattgttatgacatttgactactttattccattcattaatccgtgtgcaattgactaaaacgacacttattttgaaacggagggaata 43687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 20512640 - 20512412
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||| |||||||||||||| |||||||||        |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||     
T  20512640 tgaatgtcgctttacattttcaatgcaactttaaatttttttcttccaactttaccttcaataaatactccaacttttctctctcacacaattttcaata 20512541  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    ||||||||||||||| || || |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||  |||  ||||||||||||||| ||    
T  20512540 caactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaatttcttaatctgtgtgcaattg 20512441  T
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
     ||||||||||||||||||||||||||||    
T  20512440 actaaagcgacactcattttaaaacggag 20512412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 108 - 331
Target Start/End: Original strand, 36541501 - 36541724
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||||||||||||||||||||||||||||        |||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||    
T  36541501 tgaatgtcgttttacattttcaatacaactttactttatttcttccaactttaccctcaataaatattccaacttttctctctcacacaattttcgatgc 36541600  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| ||  ||||||| | ||| ||||||||||||||| ||| ||||||||||| |||||||||||| ||||| | |||| || |||    
T  36541601 aactttaagtttgtcttgttcctataaagcaaggtaattttagtaaaattgctataacatttgactattttatttcattccttaatatatgtgtaattgg 36541700  T
Q  308 ctaaagcgacactcattttaaaac 331  Q
     |||||||||||||||||||||||    
T  36541701 ttaaagcgacactcattttaaaac 36541724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 108 - 326
Target Start/End: Complemental strand, 32304048 - 32303830
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||| |    
T  32304048 tgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcttacacaattttcaatac 32303949  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    | ||||||||||| ||| || |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| | | | |    
T  32303948 agctttaagtttgcctttttcttataaagtaaggttattttagtaaaattgctatgacatttgactactttatttcattccttaatctgtgtacgattag 32303849  T
Q  308 ctaaagcgacactcatttt 326  Q
     |||| |||||||||||||    
T  32303848 ttaaaacgacactcatttt 32303830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 110 - 343
Target Start/End: Original strand, 53560677 - 53560909
Alignment:
Q  110 aatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaa 209  Q
    ||||||||||||||||| |||| |||||||||       |||||||| ||| |||| ||||| |||| ||||||||||||||||| ||||||||||||||    
T  53560677 aatgtcgttttacatttacaatgcaactttaatttttt-cttccaactttatcctcgataaaaactcaaacttttctctctcacataattttcaatgcaa 53560775  T
Q  210 ctttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggct 309  Q
    ||||||| ||||||| || |||||||||| |||||||||||||||||| ||||||||||| |||||||||||| |||| ||||| ||| || || |||||    
T  53560776 ctttaagattgtctttttcttataaagtaaggttattttagtaaaattattatgacatttaactactttattttattccttaatatgtatgtaattggct 53560875  T
Q  310 aaagcgacactcattttaaaacggagagaataaa 343  Q
    ||| ||||||| ||||||||||||||||| ||||    
T  53560876 aaaacgacacttattttaaaacggagagagtaaa 53560909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 43169344 - 43169571
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||| ||||||||||||||       |||| ||| ||| | ||||||||||||| ||||||| |||||||||||||||||||| |    
T  43169344 tgaatgtcattttacatttccaatacaactttaatttttttcttctaactttaccttcaataaatactcaaacttttatctctcacacaattttcaatac 43169443  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||| |||| || ||     
T  43169444 aactttaagtttgtcttattcttataaagtaaggttattttagtaaaactgcaatgacatttgactactttatttcattccttaatctttgtgtaattga 43169543  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||| ||||||| ||||| ||| ||||    
T  43169544 ctaaaacgacactaattttgaaatggag 43169571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 149 - 332
Target Start/End: Original strand, 51381773 - 51381958
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctc--tctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatt 246  Q
    |||| ||| ||| |||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  51381773 cttctaactttaccctcgataaatactccaatttttctctctctcacacaattttcaatgcaactttaagtttgtctttttattataaagtaaggttatt 51381872  T
Q  247 ttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||| || ||||| ||||||||| |||||||||||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  51381873 ttagtaaaactgctatgatatttgactattttatttcattccttaatctgtgtgcaattgactaaagcgacactcattttgaaacg 51381958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 44645348 - 44645575
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||| | || |||||||||       |||||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  44645348 tgaatgtcgctttacatttcccatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcttacataattttcaatgc 44645447  T
Q  208 aactttaagtttgtcttatttttataaagtacgg-ttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    |||||||||||| |||| ||  ||||||||| || ||||||||| ||||||| ||||| |||||||||||||||||||||||||||| |||||| || |     
T  44645448 aactttaagtttatctttttcatataaagtaaggtttattttagcaaaattgctatgatatttgactactttatttcattctttaatatgtgtgtaatta 44645547  T
Q  307 gctaaagcgacactcattttaaaacgga 334  Q
    |||||| ||||| | ||||| |||||||    
T  44645548 gctaaaacgacatttattttgaaacgga 44645575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 108 - 336
Target Start/End: Complemental strand, 42007204 - 42006977
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||||||||||||||||||||||| |||||        ||  ||| ||| ||| ||||||||||| ||||||| ||| ||| ||||||||||||||    
T  42007204 tgaatgtcgttttacattttcaatacaattttaaattttttttta-aactttatccttaataaatactcaaacttttttctttcatacaattttcaatgc 42007106  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || ||||||| || ||||||||||| ||||||| |||||||| |||||| ||||||  |||||||||||  | ||||| |||    
T  42007105 aactttaagtttgtcttgttcttataaaataaggttattttagaaaaattgctatgacatctgactattttattctattctttaatccatatgcaattgg 42007006  T
Q  308 ctaaagcgacactcattttaaaacggaga 336  Q
    ||||| ||||||||||||||||| |||||    
T  42007005 ctaaatcgacactcattttaaaatggaga 42006977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 320
Target Start/End: Original strand, 83306 - 83515
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||||||||||||||||||       |||||||| ||| ||||| ||||||||| ||||||||||||  || |||||||||||||    
T  83306 tgaatgtcattttacattttcaatacaactttaatttttt-cttccaactttaccctcattaaatactctaacttttctctc--acgcaattttcaatgc 83402  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| || || |||||||||| |||| || |   ||| || || ||||||||| ||||| ||||||||| |||    
T  83403 aactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttgtgtctaatgattaattcatttcattccttaatttgtgtgcaattgg 83502  T
Q  308 ctaaagcgacact 320  Q
    ||||| |||||||    
T  83503 ctaaaacgacact 83515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 117 - 331
Target Start/End: Complemental strand, 647726 - 647514
Alignment:
Q  117 ttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaag 216  Q
    |||||||||||||||||||||||||       |||||||| ||| ||||||||||||||| |||||||||||   ||| |||||||||||||||||||||    
T  647726 ttttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctt--acagaattttcaatgcaactttaag 647629  T
Q  217 tttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcga 316  Q
    |||||||| || |||||||||| ||  | |||||||||| ||||||  |   ||| || || ||||||||  ||||||||||||||| ||| |||| |||    
T  647628 tttgtctttttcttataaagtaagggcagtttagtaaaactgttatatctaatgattatttcatttcatttcttaatctgtgtgcaattgggtaaaacga 647529  T
Q  317 cactcattttaaaac 331  Q
    |||| ||||| ||||    
T  647528 cacttattttgaaac 647514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 108 - 338
Target Start/End: Original strand, 49470799 - 49471012
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||||||||||||||||||||||||||||       | |||||  ||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  49470799 tgaatgtcgttttacattttcaatacaactttaatttttttcatccaaatttagccacaataaatactccaacttttctctcttacacaattttcaatgc 49470898  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    | |||||||||||||||||| ||    ||||             ||||||| ||||||||||||||| ||||||  |||||||||| ||||||||| |      
T  49470899 agctttaagtttgtcttattctt----agta-------------aaaattgctatgacatttgactattttattcaattctttaatttgtgtgcaattat 49470981  T
Q  308 ctaaagcgacactcattttaaaacggagaga 338  Q
     |||| ||| |||||||||||||||||||||    
T  49470982 ttaaaacgatactcattttaaaacggagaga 49471012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 330
Target Start/End: Complemental strand, 27483270 - 27483116
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||| || |||||||||| ||  | |||||||||| ||||||| |   ||| |    
T  27483270 ctccaacttttctctc--acataattttcaatgcaactttaagtttgtctttttcttataaagtaagggaaatttagtaaaagtgttatgtctaatgatt 27483173  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    | || ||||||||| ||||| |||||||||  |||||||||||||||||||||||||    
T  27483172 atttcatttcattccttaatttgtgtgcaatgggctaaagcgacactcattttaaaa 27483116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 33194031 - 33193950
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||||    
T  33194031 gtaaaattgttatgacatttgactactttatttcattccttaatctgtgtgcaattgactaaagcgacactcattttgaaac 33193950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 47895344 - 47895259
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  47895344 gtaaaattgctatgacatatgactactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggag 47895259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 338
Target Start/End: Complemental strand, 52201980 - 52201839
Alignment:
Q  197 attttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctg 296  Q
    ||||||||| |||| ||||||||||||| ||  | ||||||| |||||||||||||||||| ||||||||||| |||| ||||||  |||| |||||| |    
T  52201980 attttcaatacaacattaagtttgtcttgttcctttaaagtaaggttattttagtaaaattattatgacatttaactattttattctattccttaatccg 52201881  T
Q  297 tgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||| || ||||| |||||| |||||||||| |||||||    
T  52201880 tgtgcaattgactaaaacgacacgcattttaaaatggagaga 52201839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 45213722 - 45213642
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  45213722 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaa 45213642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 51398160 - 51398245
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  51398160 gtaaaattgttataacatttgattactttatttcatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggag 51398245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 334
Target Start/End: Complemental strand, 2568079 - 2567931
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||| ||  ||||| |||||| ||||||  |   ||| || || |||  ||    
T  2568079 tctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaaggacatttttgtaaaagtgttatatctaatgattatttcattcaat 2567980  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    || ||||||| ||||||| |||||||| ||||| |||||||||||||||    
T  2567979 tccttaatctatgtgcaattggctaaaacgacattcattttaaaacgga 2567931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 41850531 - 41850615
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||| |||||||||| |||||||    
T  41850531 gtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgcaattagctaaagcgccactcattttgaaacgga 41850615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 188 - 335
Target Start/End: Complemental strand, 44648476 - 44648328
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttattttt-ataaagtacggttattttagtaaaattgttatgacatttgactactttatttcatt 286  Q
    |||||||||||||||||| |||||||||||||||||| ||| | ||||||||  |  | |||||||||| ||||||| |   ||| || || ||||||||    
T  44648476 tctcacacaattttcaattcaactttaagtttgtcttttttctcataaagtaaaggcagtttagtaaaagtgttatgtctaatgattatttcatttcatt 44648377  T
Q  287 ctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    | ||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  44648376 ccttaatctgtgtgcaattggctaaaacgacactcattttgaaacggag 44648328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 335
Target Start/End: Complemental strand, 2662568 - 2662412
Alignment:
Q  177 caacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactact 276  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||| || ||||||| || ||  | |||||||||| ||||||| |   ||| || |    
T  2662568 caacttttttctctcacacaattttcaatgcaactttaaatttgtctttttcttataaaataagggcaatttagtaaaagtgttatgtctaatgattatt 2662469  T
Q  277 ttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    | |||| |||||||||||  |||||||  || |||||||||||||||||||||| ||||    
T  2662468 tcatttgattctttaatc--tgtgcaatgggttaaagcgacactcattttaaaatggag 2662412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 255
Target Start/End: Complemental strand, 37225738 - 37225593
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| ||||||||||||| | ||||||||||||  ||||||||||||||||    
T  37225738 tgaatgtcactttacatttccaatacaactttaattcttttcttccaactttaccctcaataaatacgctaacttttctctc--acacaattttcaatgc 37225641  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    |||||||| |||||||| || |||||||||| ||  | ||||||||||    
T  37225640 aactttaattttgtctttttcttataaagtaaggacagtttagtaaaa 37225593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 38457470 - 38457623
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||| || |||||||||||||||||||||||||       | |||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  38457470 tgaatatcattttacattttcaatacaactttaatttttttcatccaactttaccctcaataaatactccaacttttctc--tcacacaattttcaatgc 38457567  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    || ||||||||| |||| || | ||||||||  |  | |||||||||| |||||||    
T  38457568 aattttaagtttatctttttctaataaagtaatggcagtttagtaaaagtgttatg 38457623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 174 - 334
Target Start/End: Original strand, 25061771 - 25061927
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    ||||||||||||||||  | |||||||||||||||||||||||||||  || || |||||||||| || || |||||||||| ||||||| |   ||| |    
T  25061771 ctccaacttttctctc--atacaattttcaatgcaactttaagtttg--tttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgatt 25061866  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    | || ||||||||| ||||| |||||||||  ||||||| ||||||||||||| |||||||    
T  25061867 atttcatttcattccttaatatgtgtgcaatcggctaaaacgacactcatttttaaacgga 25061927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 108 - 261
Target Start/End: Complemental strand, 46363154 - 46363002
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||||||||||||||||||        |||||||| ||| ||||||||||||||||||||||||||||  ||||||||| |||||    
T  46363154 tgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctc--acacaatttacaatg 46363057  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgtta 261  Q
    ||||||||| ||||| || || |||||||||| ||  | |||||||||| |||||    
T  46363056 caactttaaatttgtatttttcttataaagtaaggacagtttagtaaaaatgtta 46363002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 3152807 - 3152726
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||| |||| ||||||||||||||||||    
T  3152807 gtaaaattgttatgacatctgactactttatttcattccttaatatgtgtgcaattggttaaaacgacactcattttaaaac 3152726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 30431270 - 30431354
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||||  |||||||||||||||||||||    
T  30431270 gtaaaattgttatgacatttgactactttatttcattccttaatctatgtgcaact-gctaaaatgacactcattttaaaacggag 30431354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 31853561 - 31853477
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||| ||| |||||||||| ||||||||||| ||||    
T  31853561 taaaattgttatgacatttgactattttatttcattctttaatctaagtgcaattggttaaagcgacattcattttaaaatggag 31853477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 38363941 - 38364029
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||| |||||||||||||| ||||||| ||||  ||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  38363941 gtaaaattgctatgacatttgactgctttattccattggttaatctgtatgcaattggctaaaacgacactcattttaaaacggagaga 38364029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 333
Target Start/End: Original strand, 43580495 - 43580712
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaag 216  Q
    ||||||||||||||||||||||||        |||||||| ||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||     
T  43580495 tttacattttcaatacaactttaattttttttcttccaactttacccttaataaatactccaactttttt-tctcacacaattttcaatgcaactttaaa 43580593  T
Q  217 tttgtcttatt--tttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagc 314  Q
    |||||||| ||  | ||||||  | ||  | |||||||||| ||||||      ||| || || |||  |||| ||||||||||||||| ||||||||||    
T  43580594 tttgtctttttcatatataaaacaagggcagtttagtaaaaatgttatatgtaatgattatttcattctattccttaatctgtgtgcaattggctaaagc 43580693  T
Q  315 gacactcattttaaaacgg 333  Q
    | | |||||||||||||||    
T  43580694 gtcgctcattttaaaacgg 43580712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 2458158 - 2458243
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||| |||||||||||| ||||||||    
T  2458158 gtaaaattgctatgacattttactactttattgcattccttaatatgtgtgcaattggctaaagtgacactcattttgaaacggag 2458243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 23525316 - 23525231
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||| | ||| ||||| ||||||||| |||||||| |||||||||| || ||||||||    
T  23525316 gtaaaattgttatgacatttgactactttattcccttccttaatatgtgtgcaattggctaaaacgacactcatattgaaacggag 23525231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 53200681 - 53200596
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||| || || |||||| | |||||||||| ||||||||    
T  53200681 gtaaaattgctatgacatttgactactttatttcattctttaatctttgtgtaattgactaaagtggcactcattttgaaacggag 53200596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 334
Target Start/End: Original strand, 44854335 - 44854547
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||||||||||| |||||       |||||||  ||| ||||||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  44854335 tttacattttcaatacaattttaacttttt-cttccaattttaccctcaataaatactccaacttttctctcagt-acaattttcaatgcaactttaagt 44854432  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    |||| || || |||||||||| ||  | |||||||||| |||  || |   ||| || || |||  |||| ||||||| ||||||| |||||||| ||||    
T  44854433 ttgtatttttcttataaagtaagggcagtttagtaaaagtgt--tgtctaatgattatttcattcaattcattaatctatgtgcaattggctaaaacgac 44854530  T
Q  318 actcattttaaaacgga 334  Q
    | ||||||| |||||||    
T  44854531 aatcattttgaaacgga 44854547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 10352057 - 10351935
Alignment:
Q  209 actttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggc 308  Q
    ||||||| ||||||||||| ||||||| || | ||||| |||| |||||| ||||| |||||| |||||||||| |||  ||||||||| | ||| || |    
T  10352057 actttaaatttgtcttattcttataaaataagattattgtagtgaaattgctatgatatttgattactttatttaatttcttaatctgtatacaattgac 10351958  T
Q  309 taaagcgacactcattttaaaac 331  Q
    ||||||||| |||||||||||||    
T  10351957 taaagcgacgctcattttaaaac 10351935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 4391958 - 4392028
Alignment:
Q  152 ccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  4391958 ccaactttaccctcaataaatactccaacttttctctcgcaca--attttcaatgcaactttaagtttgtctt 4392028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 335
Target Start/End: Complemental strand, 31291040 - 31290892
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    |||||||||||||||||| ||||||||||||||| |||| || | ||||| ||  |  | |||||||||| ||||||| |   | | || || |||||||    
T  31291040 tctctcacacaattttcattgcaactttaagttt-tctttttctaataaaataaaggcagtttagtaaaagtgttatgtctaataattatttcatttcat 31290942  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    || |||||||||||| || |||||||| ||||||||||||||||||||||    
T  31290941 tccttaatctgtgtgtaattggctaaaacgacactcattttaaaacggag 31290892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 35557753 - 35557668
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||| |||||||||| |||| ||||||||||||||| |||||||| ||||| | ||||| ||||||||    
T  35557753 gtaaaattgctatgacatttgattactttatttaattcattaatctgtgtgcaaatggctaaaacgacatttattttgaaacggag 35557668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 41287496 - 41287411
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||| ||||||| ||| || ||||| |||||| || |||||||||||||||||||||| ||||||||    
T  41287496 gtaaaattgctatgacatttgaccactttatctcaatccttaatatgtgtgtaattggctaaagcgacactcattttgaaacggag 41287411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 27027753 - 27027863
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| |||||||| |||||       |||| ||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |    
T  27027753 tttacatttccaatacaaatttaatttttttcttcaaactttatccttaataaatactccaacttttctc--tcacacaattttcaatgcaactttaaat 27027850  T
Q  218 ttgtcttattttt 230  Q
    ||||||| |||||    
T  27027851 ttgtctttttttt 27027863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 47138115 - 47138199
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| ||||||||||||||||||||||  ||| |||||| ||||||||| || |||||| |||||||||||| |||||||    
T  47138115 gtaaaattgctatgacatttgactactttattcaattatttaatatgtgtgcaattgactaaagtgacactcattttgaaacgga 47138199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 3000817 - 3000877
Alignment:
Q  162 cctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  3000817 cctcaataaatactccaacttttctc--tcacacaattttcaatgcaactttaaatttgtctt 3000877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 27039395 - 27039490
Alignment:
Q  166 aataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtc-ttatttttataaagtacggttattttagtaaaattgttat 262  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||| || ||||||||||||| ||  | |||||||||| ||||||    
T  27039395 aataaatactccaactttcctct--cacacaattttcaatgcaactttaaatttgtctttttttttataaagtaaggacactttagtaaaagtgttat 27039490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 35099507 - 35099395
Alignment:
Q  110 aatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaa 209  Q
    |||||| |||||||||| ||||||||||||||       || ||||| ||| ||| ||||||||||| |||||||||||| ||||  |||||||||||||    
T  35099507 aatgtcattttacatttccaatacaactttaatttttttctcccaactttacccttaataaatactcaaacttttctctcgcaca--attttcaatgcaa 35099410  T
Q  210 ctttaagtttgtctt 224  Q
     ||||||||||||||    
T  35099409 ttttaagtttgtctt 35099395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 39359070 - 39359152
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | | | ||| || ||||| ||||||||||||| |||||    
T  39359070 gtaaaattgttatgacatttgactactttatttcattccttaatttatatacaattgactaaaacgacactcattttgaaacg 39359152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 45566949 - 45567030
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||||||||||||||| ||||   |||||| ||||||| ||||||||  ||||||||||||||||||||    
T  45566949 gtaaaattgctatgacatttgactactttattacatt---taatctatgtgcaattggctaaaatgacactcattttaaaacgga 45567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 1341006 - 1340944
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| || ||||||||||    
T  1341006 ctccaacttttctctc--acacaattttcaatgcaactttaagtttgtctttttcttataaagta 1340944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 35239447 - 35239524
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||||||||||||| |||||||||||||||||||| || |||||||||| ||  | |||||||||| |||||||    
T  35239447 tctctcacacaattttcactgcaactttaagtttgtctttttcttataaagtaaggacagtttagtaaaaatgttatg 35239524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 36729772 - 36729691
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||||||||||| |||||||||||||||| ||||  ||||| ||||||||| |||||||| |||| |||||||| ||||    
T  36729772 gtaaaattgttatgatatttgactactttattccattacttaatatgtgtgcaattggctaaaacgacgctcattttgaaac 36729691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 335
Target Start/End: Original strand, 40048952 - 40049109
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    ||||||||||||||||    | |||||||||||||||||||| |||||||| || ||||||||||  |  | |||| ||||| ||||||| |   ||| |    
T  40048952 ctccaacttttctctc----ataattttcaatgcaactttaaatttgtctttttcttataaagtaaaggcaatttaataaaagtgttatgtctaatgatt 40049047  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    | || ||| ||||| |||||  |||||||| | |||||||||||||| ||||||||||||||    
T  40049048 atttcattccattccttaattcgtgtgcaaatagctaaagcgacactaattttaaaacggag 40049109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 44676371 - 44676459
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||| |||||||||| |||||||||||  |||| ||||| |||||| || |||||||| | ||||||||||| |||||||||||    
T  44676371 gtaaaattgctatgacatttaactactttattctattccttaatatgtgtgtaattggctaaaacaacactcattttgaaacggagaga 44676459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 45391958 - 45391878
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||||||| |||||||||||| ||||||||| | || |||||| |||| |||| |||||||| |||||||||||||||||    
T  45391958 gtaaaattgctatgacatttgattactttattcctttgtttaatatgtgcgcaattggctaaaccgacactcattttaaaa 45391878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 26965585 - 26965506
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||| || |||||||||| ||  | ||||||||||    
T  26965585 ctccaacttttctctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaa 26965506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 36771653 - 36771594
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaa 235  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| || |||||||    
T  36771653 ctccaacttttctctc--acacaattttcaatgcaactttaagtttgtctttttcttataaa 36771594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 202 - 327
Target Start/End: Complemental strand, 38165712 - 38165587
Alignment:
Q  202 caatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgc 301  Q
    ||||||||||||||||||||||| || |||||||||| ||  | |||||||||| |||||||     ||| || || ||| ||||| ||||||||| |||    
T  38165712 caatgcaactttaagtttgtctttttcttataaagtaaggacagtttagtaaaagtgttatgtttaatgattatttcattacattccttaatctgtatgc 38165613  T
Q  302 aagtggctaaagcgacactcatttta 327  Q
    || || ||||| ||||||||||||||    
T  38165612 aattgactaaaacgacactcatttta 38165587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 51482102 - 51482167
Alignment:
Q  266 atttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    |||||||||||||||||||||| |||||||||||| || ||  |||| ||||||||||||||||||    
T  51482102 atttgactactttatttcattccttaatctgtgtgtaattgtttaaaacgacactcattttaaaac 51482167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 333
Target Start/End: Original strand, 38016524 - 38016607
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgg 333  Q
    ||||||||  |||||||||||||||||||||||||||| ||||| |||||| || ||  |||||||  ||||||||| ||||||    
T  38016524 gtaaaattactatgacatttgactactttatttcattccttaatatgtgtgtaattgattaaagcgggactcatttttaaacgg 38016607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 50420271 - 50420384
Alignment:
Q  110 aatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaa 209  Q
    |||||| ||||||||||| |||||||||||||       |||||||| |||   ||||||||||||| |||||||||||| | ||  |||||||||||||    
T  50420271 aatgtcattttacatttttaatacaactttaatttttt-cttccaactttactttcaataaatactctaacttttctctcgcgca--attttcaatgcaa 50420367  T
Q  210 ctttaagtttgtcttat 226  Q
    |||||||||||| ||||    
T  50420368 ctttaagtttgtgttat 50420384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 15514812 - 15514754
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||||| ||||||||||||||||||| || |  ||||||||||||||||||||||||||||    
T  15514812 tcaatagatactccaacttttctctcgcata--attttcaatgcaactttaagtttgtctt 15514754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 30426323 - 30426270
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaa 303  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||    
T  30426323 gtaaaattgctatgacatttgactactatattccattccttaatctgtgtgcaa 30426270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 5244638 - 5244719
Alignment:
Q  151 tccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataa 234  Q
    |||||| ||| ||||||||||||||| || |||||||||  |||  ||||||||||||||||||||||||| || || ||||||    
T  5244638 tccaactttaccctcaataaatactctaatttttctctc--acattattttcaatgcaactttaagtttgtttttttcttataa 5244719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 36460955 - 36461039
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||  ||||| |||| ||||||||||||||||| ||||| ||  | ||  | ||||||||||||||||||||||||||||    
T  36460955 gtaaaattactatgatatttaactactttatttcattccttaatatgcctacatttagctaaagcgacactcattttaaaacgga 36461039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 22730935 - 22731067
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcaca-----caattttc 202  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| | ||||||||||||| |||||||||||| ||||     |||| |      
T  22730935 tgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactcaaacttttctctcacacaaatttcaatgtaa 22731034  T
Q  203 aatgcaactttaagtttgtcttatttttataaa 235  Q
    |||| ||||||||||||||||| || |||||||    
T  22731035 aatgtaactttaagtttgtctttttcttataaa 22731067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 34059943 - 34060020
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    |||||||||||||||| ||||  |||||||||||||||||||  ||||||| || |||||||||| || || ||||||||||    
T  34059943 ctccaacttttctctcgcaca--attttcaatgcaactttaa--ttgtctttttcttataaagtaagggtagtttagtaaaa 34060020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 43599907 - 43599859
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  43599907 ctccaacttttctctc--acacaatttttaatgcaactttaagtttgtctt 43599859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 16240662 - 16240700
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  16240662 tctctcgcacaattttcaatgcaactttaagtttgtctt 16240700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 334
Target Start/End: Original strand, 42740311 - 42740456
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattc 287  Q
    ||||||||||||||||||||||||||||| || |  | |||||||||| || ||  |  ||||||||| ||||| | |   ||| || || ||| |||||    
T  42740311 tctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggca-gttagtaaaagtgttacgtctaatgattatttcattgcattc 42740409  T
Q  288 tttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| | |||| || |||||||| ||||||| |||||||||||||    
T  42740410 tttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 42740456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 790158 - 790227
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    ||||||||||||||| |||||||||||||| |||| ||| || |||||||||| ||  | ||||||||||    
T  790158 tctctcacacaatttccaatgcaactttaattttgactttttcttataaagtaagggcagtttagtaaaa 790227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 6937926 - 6937836
Alignment:
Q  243 tattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||| |||||||||| ||||| |||||||||  | ||| ||||| ||||||||||   || |||||||||||||| ||||||| ||||||||    
T  6937926 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtga--aaatggctaaagcgacattcattttgaaacggag 6937836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 332
Target Start/End: Original strand, 11393696 - 11393777
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    |||||||||||||  ||||||||||||||||  |||  ||||| | ||| ||| ||  ||||||||||||||||||||||||    
T  11393696 taaaattgttatggtatttgactactttattctatttcttaatatatgtacaactgattaaagcgacactcattttaaaacg 11393777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 19552617 - 19552686
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    ||||||||| |||||||||||||||||||| ||||| || || |||||||||| ||  | ||||||||||    
T  19552617 tctctcacagaattttcaatgcaactttaattttgtatttttcttataaagtaaggacagtttagtaaaa 19552686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 38277930 - 38277987
Alignment:
Q  278 tatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||| ||||| || |||||| |||||||| ||||||||||||||||| ||||    
T  38277930 tatttcattccttaatttgagtgcaattggctaaaacgacactcattttaaaatggag 38277987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 42857098 - 42857009
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||| ||||||| |   ||| || || |||| |||| |||||||||||| || || ||||| ||||||||||||||||||||||    
T  42857098 tttagtaaaaatgttatgtctaatgattatttcatttgattccttaatctgtgtgtaattgcctaaaacgacactcattttaaaacggag 42857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 42940155 - 42940208
Alignment:
Q  277 ttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||| ||||| ||| |||||||| || ||||||||||||||||||||||||||    
T  42940155 ttattccattccttagtctgtgtgtaattggctaaagcgacactcattttaaaa 42940208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 41287166 - 41287198
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttg 220  Q
    |||||||||||||||||||||||||||||||||    
T  41287166 tctcacacaattttcaatgcaactttaagtttg 41287198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 43600323 - 43600206
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||||||||||| |||||       |||||||| ||| ||||||||||||||| | ||||||||||  ||||||||| ||||  |||||||| |    
T  43600323 tttacattttcaatacaattttaatttttt-cttccaactttaccctcaataaatactcta-cttttctctc--acacaatttccaatataactttaaat 43600228  T
Q  218 ttgtc-ttatttttataaagta 238  Q
    ||||| || |||||||||||||    
T  43600227 ttgtcattttttttataaagta 43600206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 338
Target Start/End: Original strand, 50038333 - 50038364
Alignment:
Q  307 gctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||||||||||||||||||||||||||    
T  50038333 gctaaagcgacactcattttaaaacggagaga 50038364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 50088305 - 50088222
Alignment:
Q  261 atgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaataaaa 344  Q
    |||| |||||| ||||||||  ||||| ||||| | |||||||  || ||||||||| ||||| |||||||||||||| |||||    
T  50088305 atgatatttgagtactttatcccattccttaatatatgtgcaatgggttaaagcgacgctcatcttaaaacggagagagtaaaa 50088222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 335
Target Start/End: Original strand, 2662639 - 2662669
Alignment:
Q  305 tggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||    
T  2662639 tggctaaagcgacactcattttaaaacggag 2662669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 334
Target Start/End: Complemental strand, 4476425 - 4476281
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattc 287  Q
    ||||||||||||||||||||||||||||| || | |  |||||||||| || ||  |  ||||||||| ||||| | |   ||| || || ||| |||||    
T  4476425 tctcacacaattttcaatgcaactttaagcttat-tattttttataaaataagggca-gttagtaaaagtgttacgtctaatgattatttcattgcattc 4476328  T
Q  288 tttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| | |||| || |||||||| ||||||| |||||||||||||    
T  4476327 tttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 4476281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 22414840 - 22414878
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  22414840 tctcttacacaattttcaatgcaactttaagtttctctt 22414878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 334
Target Start/End: Complemental strand, 43736922 - 43736790
Alignment:
Q  200 ttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgt 299  Q
    |||||||||||||||||||| |||| || ||||||| || |  || |||||||||| ||||||  |   ||| || || ||||||| | | ||| | |||    
T  43736922 ttcaatgcaactttaagttt-tctttttcttataaaataagagtagtttagtaaaagtgttatatctaatgattatttcatttcatccctaaattt-tgt 43736825  T
Q  300 gcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||| |||||||||||||||||||||| |||||||    
T  43736824 gcaattggctaaagcgacactcattttgaaacgga 43736790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 338
Target Start/End: Original strand, 30186380 - 30186413
Alignment:
Q  305 tggctaaagcgacactcattttaaaacggagaga 338  Q
    |||||||| |||||||||||||||||||||||||    
T  30186380 tggctaaaacgacactcattttaaaacggagaga 30186413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 34059886 - 34059919
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaa 141  Q
    |||||||| |||||||||||||||||||||||||    
T  34059886 tgaatgtcattttacattttcaatacaactttaa 34059919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 52202434 - 52202401
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaa 141  Q
    ||||||||||||| ||||||||||||||||||||    
T  52202434 tgaatgtcgttttgcattttcaatacaactttaa 52202401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 53716091 - 53716141
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||| ||||||||||||||||||  ||||||| || ||||||||||    
T  53716091 tctctcacacagttttcaatgcaactttaa--ttgtctttttcttataaagta 53716141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 334
Target Start/End: Original strand, 16240713 - 16240801
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||| ||||||| |   ||| || || |||||||||  |||| |||||||||  ||||||| ||||||||||||| |||||||    
T  16240713 tttagtaaaaatgttatgtctaatgattatttcatttcattccctaatttgtgtgcaataggctaaaacgacactcattttgaaacgga 16240801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 19115378 - 19115338
Alignment:
Q  305 tggctaaagcgacactcattttaaaacggagagaataaaag 345  Q
    ||||||||||||| ||||||||||||||||| || ||||||    
T  19115378 tggctaaagcgacgctcattttaaaacggagggagtaaaag 19115338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 36381372 - 36381336
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcatt 286  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  36381372 gtaaaattgctatgacatttgactactttattccatt 36381336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 8e-77; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 24259617 - 24259843
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| |||| |||||||||       |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24259617 tgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatgc 24259716  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||    
T  24259717 aactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattgg 24259816  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
     ||||||||||||||||||||||||||    
T  24259817 ataaagcgacactcattttaaaacgga 24259843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 34124301 - 34124528
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| |||||||||||||| |||||||||       |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| |    
T  34124301 tgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcacacaattttcaatac 34124400  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||| |||    
T  34124401 aactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattgg 34124500  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||| ||||||||    
T  34124501 ctaaagcgacactcattttgaaacggag 34124528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 108 - 338
Target Start/End: Complemental strand, 17499863 - 17499633
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||| |||| ||| |||||       |||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  17499863 tgaatgtcgctttacatttccaatgcaattttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcatacaattttcaatgc 17499764  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||     
T  17499763 aactttaagtttgtctttttcttataaagtaatgttattttagtaaaattgttatgacatttgactattttatttcattcattaatctgtgtgcaattga 17499664  T
Q  308 ctaaagcgacactcattttaaaacggagaga 338  Q
    ||||| |||||||||||||||||||||||||    
T  17499663 ctaaaacgacactcattttaaaacggagaga 17499633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 119 - 334
Target Start/End: Original strand, 45889580 - 45889795
Alignment:
Q  119 ttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtt 218  Q
    |||||||||||||||||||||||       ||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45889580 ttacattttcaatacaactttaacttttttcttcctactttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtt 45889679  T
Q  219 tgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgaca 318  Q
    ||| || || |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||||||| |||||||| |||||    
T  45889680 tgtttttttcttataaagtaaggttattttagtaaaattgctataacatttgactactttatttcattccttaatatgtgtgcaattggctaaaacgaca 45889779  T
Q  319 ctcattttaaaacgga 334  Q
    |||||||| |||||||    
T  45889780 ctcattttgaaacgga 45889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 47321150 - 47321378
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||||||||||||||||||        |||||||| ||| ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  47321150 tgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactctaacttttctcactcgcacaattttcaatg 47321249  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    |||||||||| ||||||| || |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||  |||| ||||||||||||||| ||    
T  47321250 caactttaaggttgtctttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaattccttaatctgtgtgcaattg 47321349  T
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
    |||||| ||||||||||||||||||||||    
T  47321350 gctaaaacgacactcattttaaaacggag 47321378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 31941564 - 31941788
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  31941564 tgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaactattctctctcacataattttcaatgc 31941663  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||   || ||  ||||| |||    
T  31941664 aactttaagtttgtcttgttcttataaagtaaggttattttaataaaattgctatgacatttgactactttattccattct---atttgcatgcaattgg 31941760  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||| ||||||||    
T  31941761 ctaaagcgacactcattttgaaacggag 31941788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 118 - 334
Target Start/End: Original strand, 28116261 - 28116477
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| ||||||||||||||       |||||||| ||| ||| ||||||||||| |||||||||||| ||||||||||||| || ||||||||||    
T  28116261 tttacatttccaatacaactttaatttttttcttccaactttacccttaataaatactcaaacttttctctcacacacaattttcagtgtaactttaagt 28116360  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||| |||||| |||||||| ||| ||||| |||    
T  28116361 ttgtcttattcttataaagtaaggttattttagtaaaattgctatgacatttgactactttattccattccttaatccgtgtgcaattggttaaagtgac 28116460  T
Q  318 actcattttaaaacgga 334  Q
    ||||||||| |||||||    
T  28116461 actcattttgaaacgga 28116477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 19282556 - 19282330
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||| ||||||||||||||        |||||||| ||| | ||||||||||||| |||||||||||||||||||||||  |||     
T  19282556 tgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccttcaataaatactctaacttttctctctcacacaatttctaata 19282457  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    ||| |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||    
T  19282456 caattttaagtttgtcttgtttt-ataaagtaaggttattttagtaaaattgttatgacatttgactactttattccattccttaatccgtgtgcaattg 19282358  T
Q  307 gctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||| ||||||||||||||||    
T  19282357 gctaaagcgacgctcattttaaaacgga 19282330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 55126503 - 55126729
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| ||||| |||||||||||||||||||       |||| |||  || ||| || |||||||| ||||||||||||  |||||||||||  |||    
T  55126503 tgaatgtcattttaaattttcaatacaactttaatttttctcttctaactctaccctaaaaaaatactctaacttttctctcctacacaattttccttgc 55126602  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||  ||||||| |||    
T  55126603 aactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgctatgacatttgactactttatttcattccttaatcaatgtgcaattgg 55126702  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
    ||||| ||||| |||||||||||||||    
T  55126703 ctaaaacgacattcattttaaaacgga 55126729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 108 - 352
Target Start/End: Complemental strand, 4408324 - 4408080
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||| |||||||| ||||| |||||||||        ||||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  4408324 tgaatgtcgctttacattctcaatgcaactttaatttttcttcttccgactttaacctcaataaatgctcaaacttttctctctcacacaattttcaatg 4408225  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    ||| |||||||||||||| || ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||| |     
T  4408224 caattttaagtttgtctttttcttatatagtaaggttattttagtaaaattgttatgacacttgactactttatttcattccttaatttatgtgcaatta 4408125  T
Q  307 gctaaagcgacactcattttaaaacggagagaataaaaggtaaaac 352  Q
    | |||||||||| ||||||| ||||| || ||||||||| ||||||    
T  4408124 gttaaagcgacattcattttgaaacgaag-gaataaaagttaaaac 4408080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 51434403 - 51434176
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| |||||||||  ||| |||||||||       |||| ||| ||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  51434403 tgaatgtcgctttacatttctaatgcaactttaattttttccttcaaactttaccctcaataaatactttaacttttctctctcacacaattttcaatgc 51434304  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||| ||||| ||||| || |||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||| ||||| | | ||||| |||    
T  51434303 aacttaaagttagtctttttcttataaagtaaggttattttaataaaattgttatgaaatttgactactttattccattccttaatatatatgcaattgg 51434204  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
     |||||||||| ||||||||||||||||    
T  51434203 ttaaagcgacattcattttaaaacggag 51434176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 185 - 341
Target Start/End: Original strand, 54233899 - 54234055
Alignment:
Q  185 ctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttca 284  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||||||||||| ||||| |||||| ||||||||| ||    
T  54233899 ctctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagcttattttagtaaaattgatatgatatttgagtactttattcca 54233998  T
Q  285 ttctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaata 341  Q
    ||  ||||| ||| ||||| |||||||||||||||||||||| |||||||| |||||    
T  54233999 tttcttaatttgtatgcaattggctaaagcgacactcattttgaaacggagggaata 54234055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 6462015 - 6462246
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctc---aataaatactccaacttttctctct--cacacaattttc 202  Q
    ||||||||| ||||||||| ||||||||||||||       |||||||| ||| ||||   ||||||||||| ||||||| ||| |  |||||||| |||    
T  6462015 tgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcctcaataaatactcaaacttttatctatttcacacaatattc 6462114  T
Q  203 aatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgca 302  Q
    ||||||||||||||||||| || || |||||||||| |||||||||||| |||||| ||||| |||||||||||||||| | ||  ||||||||||||||    
T  6462115 aatgcaactttaagtttgttttgttcttataaagtaaggttattttagtcaaattgctatgaaatttgactactttattacttttcttaatctgtgtgca 6462214  T
Q  303 agtggctaaagcgacactcattttaaaacgga 334  Q
    | |||||||| |||| |||||||| |||||||    
T  6462215 attggctaaaacgaccctcattttgaaacgga 6462246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 330
Target Start/End: Original strand, 30022087 - 30022293
Alignment:
Q  121 acattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttg 220  Q
    |||||| ||||||||||||||       |||||||| ||| |||||||||||||| |||||||||||  |||||||||||||||||||||||| ||||||    
T  30022087 acatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctc--tcacacaattttcaatgcaactttgagtttg 30022184  T
Q  221 tcttatttttataaagtacggttattttagtaaaattgttatgacat-ttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacac 319  Q
    |||| || ||||| |  | || || |||||||||| |||||| | ||  ||| || |||||||||||| ||||||| ||||||| | |||||| ||||||    
T  30022185 tctttttcttatacaagaagg-tagtttagtaaaagtgttat-atataatgattattttatttcattccttaatctatgtgcaatttgctaaaacgacac 30022282  T
Q  320 tcattttaaaa 330  Q
    |||||||||||    
T  30022283 tcattttaaaa 30022293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 334
Target Start/End: Original strand, 34096067 - 34096246
Alignment:
Q  153 caacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagta 252  Q
    |||| ||| |||||||||||| || ||||||||||  ||||||||||||||||| ||||||||||||||||| || |||||||||| ||  | |||||||    
T  34096067 caactttaccctcaataaatattcaaacttttctc--tcacacaattttcaatgaaactttaagtttgtctttttcttataaagtaagggcaatttagta 34096164  T
Q  253 aaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||| ||||| | |   ||| || || |||||||| |||||| ||||||||| || ||||| |||||||||| ||||||||||    
T  34096165 aaagtgttaagtctaatgattatttcatttcattttttaatttgtgtgcaattgcctaaaacgacactcatcttaaaacgga 34096246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 326
Target Start/End: Complemental strand, 34534166 - 34534021
Alignment:
Q  181 ttttctctctcacacaattttcaatgcaacttt-aagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactacttta 279  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| || |||||||  | ||||||||||||||||||| |||||||||||| |||||||    
T  34534166 ttttctctttcacacaattttcaatgcaacttttaagtttgtctttttcttataaaaga-ggttattttagtaaaattgctatgacatttgattacttta 34534068  T
Q  280 tttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    ||  |||| |||||||| |||||| | ||||||  |||||| |||||    
T  34534067 ttcaattccttaatctgagtgcaattagctaaaatgacacttatttt 34534021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 1819712 - 1819797
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||||    
T  1819712 gtaaaattgctatgacatttgactactttatttcattctttaatctgtgttcaattgactaaagcgacattcattttaaaacggag 1819797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 18430139 - 18430224
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||| ||||||||    
T  18430139 gtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgcaattggctaaagcaacactcattttgaaacggag 18430224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 40345354 - 40345269
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  40345354 gtaaaattgatatgacatttgactactttatttcattcattaatttgtgtgcaattggctaaagcgacattcattttaaaacggag 40345269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 52957797 - 52957712
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  52957797 gtaaaattgctatgacatttgactactttattccattccttaatctgtgtgcaattggctaaagcgacactcattttgaaacggag 52957712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 37654560 - 37654645
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||| ||||||||    
T  37654560 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaattggctaaaacgacactcattttgaaacggag 37654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 2728405 - 2728321
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||||||||||||||||  |||| ||||| ||||||||| |||||||||||||||||||||| |||||||    
T  2728405 gtaaaattgttatgacatttgactactttattcaattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacgga 2728321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 19849100 - 19849242
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||| || ||||||||||||||       |||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  19849100 tttacaattccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctc--tcacacaattttcaatgcaactttaagt 19849197  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttat 262  Q
    |||| || || |||||||||  ||  | |||||||||| ||||||    
T  19849198 ttgtttttttcttataaagtgagggcagtttagtaaaaatgttat 19849242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 34360077 - 34360225
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| || |||||||||| ||  | |||||||||| ||||||  |   ||| |    
T  34360077 ctccaacttttctc--tcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatatctaatgatt 34360174  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatt 324  Q
    | || ||||||||| ||||||||  ||||| || |||||||||||||||||    
T  34360175 atttcatttcattccttaatctggatgcaattgactaaagcgacactcatt 34360225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 24941030 - 24941115
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||    
T  24941030 gtaaaattgttatgacatttgactactttattccattctttaacatgtgtgcaattggttaaaacgacactcattttgaaacggag 24941115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 27653824 - 27653905
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||    
T  27653824 gtaaaattgctatgacatttgactactttattccattccttaatttgtgtgcaattggctaaagcgacactcattttgaaac 27653905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 38991770 - 38991685
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||| ||||||||||| ||||  ||||||||||||||| || ||||| ||||||||||||||||||||||    
T  38991770 gtaaaattgttatgacatttaactactttattacatttcttaatctgtgtgcaattgactaaaacgacactcattttaaaacggag 38991685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 42605722 - 42605807
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| || ||||| |||| |||||||||||||||||    
T  42605722 gtaaaattgctatgacatttgactattttattttattctttaatctgtgtgcaattgactaaaacgacgctcattttaaaacggag 42605807  T

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Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 2493252 - 2493336
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| |||| ||| ||||||||||||| |||||||    
T  2493252 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaattggcaaaaacgacactcattttgaaacgga 2493336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 29519532 - 29519448
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||| |||||| || |||||||| |||||||||||||||||||||    
T  29519532 gtaaaattgttatgatatttgactattttatttcattccttaatatgtgtgtaattggctaaaacgacactcattttaaaacgga 29519448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 53814504 - 53814420
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||| | ||| |||| |||||||||||||||||||||    
T  53814504 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcgattggttaaaacgacactcattttaaaacgga 53814420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 119 - 334
Target Start/End: Original strand, 22212358 - 22212571
Alignment:
Q  119 ttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtt 218  Q
    |||||||| ||||| ||||||||       |||||||| ||| ||||||||||||||||||| ||| ||||  |||||||||||||| ||||||||||||    
T  22212358 ttacatttccaatataactttaatttttttcttccaactttaccctcaataaatactccaacatttttctc--acacaattttcaatacaactttaagtt 22212455  T
Q  219 tgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgaca 318  Q
    ||  || ||| ||||||  |  |  | ||| |||||| ||||||| |   ||| || || ||||||||| ||||| ||||| ||| ||||||||||||||    
T  22212456 tgagttttttatataaaacaaaggcagttttgtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtgttcaattggctaaagcgaca 22212555  T
Q  319 ctcattttaaaacgga 334  Q
    | ||||||||||||||    
T  22212556 cccattttaaaacgga 22212571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 55548290 - 55548187
Alignment:
Q  184 tctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttc 283  Q
    |||||||| |||||||| |||||||||||||||||||||||  |   |||||||| |  |||||||||||||||||||| ||||||||||| ||||||||    
T  55548290 tctctctctcacaatttccaatgcaactttaagtttgtctttgtcaaataaagtaagactattttagtaaaattgttataacatttgactattttatttc 55548191  T
Q  284 attc 287  Q
    ||||    
T  55548190 attc 55548187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 152 - 332
Target Start/End: Original strand, 42672439 - 42672617
Alignment:
Q  152 ccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagt 251  Q
    ||||| ||| |||||||||||||| ||||||  |||||| |||||||||||||| ||||||||| |||||||| || |||||||||| |  || ||||||    
T  42672439 ccaactttaccctcaataaatacttcaactt--ctctcttacacaattttcaatacaactttaaatttgtctttttcttataaagtatgagtagtttagt 42672536  T
Q  252 aaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    |||| ||||||| |   ||| || || |||  |||| ||||| ||||||||| || |||||  |||||||||||| |||||    
T  42672537 aaaagtgttatgtctaatgattatttcattatattccttaatttgtgtgcaattgactaaattgacactcattttgaaacg 42672617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 331
Target Start/End: Complemental strand, 36805580 - 36805376
Alignment:
Q  117 ttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaag 216  Q
    |||||||||| ||||||||||||||       |||||||| |||||||||       ||||||||||| ||||  |||||||||||||| ||||||||||    
T  36805580 ttttacatttgcaatacaactttaatttttttcttccaactttaacctca-------ctccaacttttttctc--acacaattttcaatacaactttaag 36805490  T
Q  217 tttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcga 316  Q
    |||||||| ||  |||||| || ||  | |||||||||| ||||||| |   ||| || || ||||||||| ||||||||||||||| | | |||| |||    
T  36805489 tttgtctttttcatataaactaaggacagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtgtgcaattag-taaaacga 36805391  T
Q  317 cactcattttaaaac 331  Q
    |||||||||||||||    
T  36805390 cactcattttaaaac 36805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 49089609 - 49089693
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||| ||  |||| |||||||||||||||||    
T  49089609 tttagtaaaattgttatgatatttgactacattatttcattccttaatatgtgtgcaattgattaaaacgacactcattttaaaa 49089693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 50623235 - 50623319
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||| ||||||||||||||||| |||||||||| ||||| |||||| || || ||||| ||||||||||||||||||||||    
T  50623235 taaaattgatatgacatttgactactctatttcattccttaatatgtgtgtaattgactaaaacgacactcattttaaaacggag 50623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 30492734 - 30492849
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       || ||||| ||| |||||||||||||||||||||||||||  |||| | |||| |||||    
T  30492734 tgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactccaacttttctcttgcaca-attttttaatgc 30492832  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||||||||||||    
T  30492833 aactttaagtttgtctt 30492849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 37445666 - 37445819
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| ||||||||||| |||||||||||||       |||||||| ||| |||||||||||| || || |||||| ||  ||| |||||| |||||    
T  37445666 tgaatgtcattttacatttttaatacaactttaatttttttcttccaactttaccctcaataaatattcaaatttttctttc--acataatttttaatgc 37445763  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||| |||||||| || |||||||||| ||  | |||||||||| |||||||    
T  37445764 aactttaaatttgtctttttcttataaagtaagggcagtttagtaaaagtgttatg 37445819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 45520603 - 45520451
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| |||  |||||||||| ||||||||||||  | |||||||| |||||    
T  45520603 tgaatgtcactttacattttcaatacaactttaatttttt-cttccaactttatccttgataaatactcaaacttttctctc--atacaatttttaatgc 45520507  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||||||||||||||| |||||| ||| ||  |  ||||||||| |||||||    
T  45520506 aactttaagtttgtcttattcttataatgtaagggcagcttagtaaaagtgttatg 45520451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 34316382 - 34316455
Alignment:
Q  262 tgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||| |||||||||||| ||||||||    
T  34316382 tgacatttgactattttatttcattccttaatctgtgtgcaattggttaaagtgacactcattttgaaacggag 34316455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 49080484 - 49080399
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||  ||||||||||||||||||||||| |||| ||||| ||||||||| ||| |||||||||||| ||||| ||||||||    
T  49080484 gtaaaattactatgacatttgactactttattttattccttaatatgtgtgcaattggataaagcgacacttattttgaaacggag 49080399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 52848061 - 52847976
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||||||||||||  |||  ||||||||| ||||| |||||||| | ||||||||||||||||||||    
T  52848061 gtaaaattgctatgacatttgactactttattcaatttcttaatctgtatgcaattggctaaaacaacactcattttaaaacggag 52847976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 31987310 - 31987424
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||||||  |||||||||||||       |||||||| ||| ||||||||||||||||||||||  |||||| || ||||||||||||    
T  31987310 tgaatgtcactttacatttctaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttt--tctctcgcataattttcaatgc 31987407  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||| ||||||||    
T  31987408 aactttaaatttgtctt 31987424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 39984968 - 39985052
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||| ||||||||||||||| ||||||  |||| ||||| ||| ||||| |||||||||||||||||||||| ||||||||    
T  39984968 taaaattgctatgacatttgactattttattcaattccttaatatgtatgcaattggctaaagcgacactcattttgaaacggag 39985052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 44855258 - 44855395
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaa--cattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaa 215  Q
    ||||||||| ||||||||||||||       |||||||  | ||| |||||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  44855258 tttacatttccaatacaactttaagttttctcttccaattctttaccctcaataaataatccaacttttctc--tcacacaattttcaatgcaactttaa 44855355  T
Q  216 gtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
     |||||||| |  |||||||||| ||  | ||||||||||    
T  44855356 ttttgtcttttccttataaagtaagggcagtttagtaaaa 44855395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 28734749 - 28734824
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    ||||||| |||||||||||||||||||||||  |||||||||| | ||||||| ||| ||||||||||||||||||    
T  28734749 taaaattattatgacatttgactactttattcaattctttaatatatgtgcaattggttaaagcgacactcatttt 28734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 335
Target Start/End: Complemental strand, 56556355 - 56556200
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    |||||||||||  ||||||||||||||||||| ||  |||||||||| || || |||||||| | || || |||||||||| |||||||   | | |  |    
T  56556355 tccaacttttc--tctcacacaattttcaatgtaatgttaagtttgtatttttcttataaagcaaggataatttagtaaaagtgttatg---tctaatga 56556261  T
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
     || |||  |||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  56556260 tttcattcaattccttaatctgtgtgcaattggttaaagcgacactcattttaaaacggag 56556200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 29289984 - 29289917
Alignment:
Q  161 acctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttattttt 230  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||| |||||||||||||| |||||    
T  29289984 acctcaataaatacttcaacttttctctc--acacaattttcaatgcaattttaagtttgtctttttttt 29289917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 19878798 - 19878883
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| || ||||||||| ||||||||| ||||| ||||||| || |||| |||||||||||||| ||||||| ||||||||    
T  19878798 gtaaaattgctacgacatttgattactttattccattccttaatctctgcgcaattggctaaagcgacattcattttgaaacggag 19878883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 35928507 - 35928622
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||||||||||||||||||       |||||||| ||| |||||||||||||| |||| ||||| ||    |||||||||||||||| |||||||    
T  35928507 tttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactgcaacgtttctttc----acaattttcaatgcaattttaagt 35928602  T
Q  218 ttgtcttatttttataaagt 237  Q
    || |||| || |||||||||    
T  35928603 ttatctttttcttataaagt 35928622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 338
Target Start/End: Complemental strand, 32141065 - 32140904
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    |||||||||||  |||||||||||||||||||||| |||| ||||||||| | ||||||||||| ||  | |||||||||| ||||||| |   ||| ||    
T  32141065 tccaacttttc--tctcacacaattttcaatgcaaatttatgtttgtcttttgtttataaagtaggggcagtttagtaaaagtgttatgtctaatgatta 32140968  T
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
     || |||  |||  ||||||||||| ||| ||| ||||   ||||||||||| |||||||||||    
T  32140967 tttcattcaatttcttaatctgtgtacaattggttaaattaacactcattttgaaacggagaga 32140904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 40010879 - 40010795
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| |||||| ||  | ||||| ||||||||||||| |||||||    
T  40010879 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgtaatggactaaaacgacactcattttgaaacgga 40010795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 44571872 - 44571792
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||||||  ||||||||||||||| |||||||||||| ||||| ||| ||||| ||| ||||| ||||||||||||||||    
T  44571872 gtaaaattactatgacatttgactattttatttcattcattaatatgtttgcaattggttaaagagacactcattttaaaa 44571792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 45043595 - 45043507
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||  ||||||||| || ||||| ||||||| ||||| |||| ||||||    
T  45043595 gtaaaattgctatgacatttgactactttattacattccttaaaatgtgtgcaattgactaaaacgacacttattttgaaacagagaga 45043507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 56373582 - 56373498
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| || ||||||||||||||||||| ||||| ||||| ||| | ||| ||||||||| |||||||||||| |||||||    
T  56373582 gtaaaattgctacgacatttgactactttattccattccttaatatgtcttcaattggctaaagtgacactcattttgaaacgga 56373498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 29370753 - 29370815
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaa 312  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| || |||||    
T  29370753 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtgcaattgactaaa 29370815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 15501224 - 15501147
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||||||||||| ||||||||||||||||||| || || |||||||||| ||  | |||||||||| |||||||    
T  15501224 tctctcacacaatttttaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaaatgttatg 15501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 20448189 - 20448258
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacac 319  Q
    ||||||||| |||||||||| |||||||||||  |||| ||||| ||||||||| |||||||||||||||    
T  20448189 gtaaaattgctatgacatttaactactttattcaattccttaatatgtgtgcaattggctaaagcgacac 20448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 153 - 263
Target Start/End: Complemental strand, 38761925 - 38761819
Alignment:
Q  153 caacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagta 252  Q
    |||| |||||||||||||||||||||||||||||||    |||||||||||| | |||||||||| ||||||  | | |||||||| || |  |||||||    
T  38761925 caactttaacctcaataaatactccaacttttctct----cacaattttcaaggtaactttaagtgtgtctttctctaataaagtaagggtgatttagta 38761830  T
Q  253 aaattgttatg 263  Q
    ||| |||||||    
T  38761829 aaagtgttatg 38761819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 39671176 - 39671099
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||||  | || |||||||||  |||||||    
T  39671176 tctctcacacaattttcaatgcaactttaagtttgtttttttcttataaagtaaaggtagtttagtaaatgtgttatg 39671099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 238
Target Start/End: Original strand, 6510134 - 6510252
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||| |||||||||||||||||||       ||  |||| ||| ||||||||||||||||| |||||||||   |||||||||| |||| || |||||||    
T  6510134 tttatattttcaatacaactttaacttttttctctcaactttaccctcaataaatactccaccttttctctt--acacaatttttaatgtaattttaagt 6510231  T
Q  218 ttgtcttatttttataaagta 238  Q
    ||||||| || ||||||||||    
T  6510232 ttgtctttttattataaagta 6510252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 21045215 - 21045267
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  21045215 tctctcacacaattttcaatgcaactttaattttgtctttttcttataaagta 21045267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 52732673 - 52732749
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttat 262  Q
    |||||||||||||||||||||||||||||| |||||||| |  |||||||||| ||  | |||||||||| ||||||    
T  52732673 tctctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtgttat 52732749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 54042189 - 54042105
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatc-tgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||| || |||||||||||| |||||| ||||  |||||  ||||||||| |||||||| |||||||||||||||||||||    
T  54042189 taaaattgctacgacatttgactattttattccatttcttaattatgtgtgcaattggctaaaacgacactcattttaaaacgga 54042105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 41920316 - 41920231
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||| ||||| |||||||| ||| ||||||||||| ||||||||| | ||||||  |||||| ||||| ||||||||    
T  41920316 gtaaaattgctattacattcgactacttgattccattctttaatatgtgtgcaattagctaaaatgacacttattttgaaacggag 41920231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 51930658 - 51930727
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    |||||||||||||||||||||||||||||| |||||| | || |||||||||| ||  | ||||||||||    
T  51930658 tctctcacacaattttcaatgcaactttaattttgtcattttcttataaagtaagggcagtttagtaaaa 51930727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 43421194 - 43421142
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||||| |||||||||||||||| |||||||| || ||||||||||    
T  43421194 tctctcacacaatattcaatgcaactttaattttgtctttttcttataaagta 43421142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 54092009 - 54092078
Alignment:
Q  153 caacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||| ||| ||||||||||||||||||||||  |||||| || |||||||||| ||| ||||||||||||||    
T  54092009 caactttaccctcaataaatactccaacttt--tctctcgcataattttcaatacaattttaagtttgtctt 54092078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 11835187 - 11835225
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  11835187 tctctcacacaattttcaatgcaactttaagtttatctt 11835225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 31817279 - 31817200
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttattt-ttataaagtacggttattttagtaaaa 255  Q
    |||||||||||  |||||||||||||||||||||||||||| ||||| || ||| |||||||||| ||  | ||||||||||    
T  31817279 tccaacttttc--tctcacacaattttcaatgcaactttaattttgtattttttcttataaagtaagggaagtttagtaaaa 31817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 50072341 - 50072379
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttat 226  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  50072341 tctcacacaattttcaatgcaactttaattttgtcttat 50072379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 54512095 - 54512157
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |||||| | || ||||||||||    
T  54512095 ctccaacttttctc--tcacacaatgttcaatgcaactttaattttgtcattttcttataaagta 54512157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 24259592 - 24259560
Alignment:
Q  309 taaagcgacactcattttaaaacggagagaata 341  Q
    |||||||||||||||||||||||||||||||||    
T  24259592 taaagcgacactcattttaaaacggagagaata 24259560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 19930865 - 19930947
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||| |||||||||| |||| ||||||||||||  |||| | || |||| || ||||| ||||| |||||||||||||||    
T  19930865 taaaattgctatgacatttaactattttatttcattc-ctaatatatgcgcaattgactaaaacgacagtcattttaaaacgga 19930947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 29840195 - 29840286
Alignment:
Q  244 attttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||| ||||||| |   ||| || || ||| ||||| ||||| ||||||||| ||| |||| ||||||||||||| ||||||||    
T  29840195 attttagtaaaagtgttatgtctaatgattatttcattccattccttaatttgtgtgcaattgggtaaaacgacactcattttgaaacggag 29840286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 32140853 - 32140798
Alignment:
Q  279 atttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| ||||| ||||||||| || ||||| ||||||||||||| |||||||    
T  32140853 atttcattccttaatttgtgtgcaattgactaaaacgacactcattttgaaacgga 32140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 45049770 - 45049826
Alignment:
Q  163 ctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 221  Q
    |||||||| |||||| |||||||| || ||||  |||||||||||||||||||||||||    
T  45049770 ctcaataagtactcctacttttctttcgcaca--attttcaatgcaactttaagtttgt 45049826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 45903551 - 45903446
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       || ||||| | |||||||| || |||||  |||||  |||||||  |||||||||||||    
T  45903551 tgaatgtcactttacattttcaatacaactttaatttttttctaccaacttaaacctcaaaaagtactctgacttt--tctctcatccaattttcaatgc 45903454  T
Q  208 aactttaa 215  Q
    ||||||||    
T  45903453 aactttaa 45903446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 29840126 - 29840168
Alignment:
Q  152 ccaacattaacctcaataaatactccaacttttctctctcaca 194  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||    
T  29840126 ccaactttaccctcaataaatactccaacttttctctcgcaca 29840168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 38692472 - 38692510
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  38692472 tctctcgcacaattttcaatgcaactttaattttgtctt 38692510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 52253998 - 52254048
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtg 300  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||| ||||||    
T  52253998 gtaaaattactatgacatttgacaactttatttcattccttaatatgtgtg 52254048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 39671227 - 39671194
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaa 141  Q
    ||||||||||||||||||| ||||||||||||||    
T  39671227 tgaatgtcgttttacatttccaatacaactttaa 39671194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 338
Target Start/End: Original strand, 51434426 - 51434455
Alignment:
Q  309 taaagcgacactcattttaaaacggagaga 338  Q
    ||||||||||||||||||||||||||||||    
T  51434426 taaagcgacactcattttaaaacggagaga 51434455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 54092114 - 54092179
Alignment:
Q  269 tgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| || ||||||||| ||||| ||| ||||| ||  |||| |||||||||||||||||||||    
T  54092114 tgactatttcatttcattccttaatttgtatgcaattgattaaaacgacactcattttaaaacgga 54092179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 3093411 - 3093460
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaa 215  Q
    |||||||||||| |||||||  ||||||||||||||| | ||||||||||||    
T  3093411 tcaataaatacttcaacttt--tctctcacacaatttccgatgcaactttaa 3093460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 30492895 - 30492951
Alignment:
Q  279 atttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||| ||||| ||||| ||||||||| |||||||| | ||||||||||| ||||||||    
T  30492895 attccattccttaatttgtgtgcaattggctaaaaccacactcattttgaaacggag 30492951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 40837292 - 40837362
Alignment:
Q  262 tgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||||||||| || ||| ||||| || ||| ||||| |||| ||||||| |||||||    
T  40837292 tgacatttgactactttatttcattc-ttgatccgtgtgtaattggttaaag-gacattcattttgaaacgga 40837362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 2e-74; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 42329689 - 42329463
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  42329689 tgaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatacttcaacttttctctctcacacaattttcaatgc 42329590  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  42329589 aactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgctatgacatttgactactttatttcattccttaatttgtgtgcaattgg 42329490  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
     |||||||| ||||||||| |||||||    
T  42329489 ttaaagcgatactcattttgaaacgga 42329463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 29653657 - 29653430
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||| ||||||||||||||       |||||||| ||| ||||||||||||||| |||||||||||||||||||||||  |||||    
T  29653657 tgaatgtcattttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctctcacacaatttctaatgc 29653558  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || ||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| |||    
T  29653557 aactttaagtttgtcttgttcttataaagtaacgttattttagtaaaattgctatgacatttgactattttatttcattctttaatccgtatgcaattgg 29653458  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||| ||||||||||||||||| ||||    
T  29653457 ctaaaacgacactcattttaaaatggag 29653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 153 - 334
Target Start/End: Complemental strand, 27652419 - 27652238
Alignment:
Q  153 caacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagta 252  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||| |||||||||||||    
T  27652419 caactttaccctcaataaataatccaacttttctctctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaaggttattttagta 27652320  T
Q  253 aaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||||| |||||| ||||  |||||||||||| || || |||||||||||||||||||||||||||    
T  27652319 aaattgttatgacatttgactattttattccatttcttaatctgtgtgtaattgcctaaagcgacactcattttaaaacgga 27652238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 108 - 341
Target Start/End: Complemental strand, 4833776 - 4833548
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||| | |||||||||||||| |||||||||       |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  4833776 tgaatgttgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctttcacacaattttcaatgc 4833677  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| |||     ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||  | ||||||| |||    
T  4833676 aactttaagtttgtctttttt-----aagtaaggttattttagtaaaattgttatgacatttaactactttatttcattccttaacatatgtgcaattgg 4833582  T
Q  308 ctaaagcgacactcattttaaaacggagagaata 341  Q
    ||||||||||||||||||||||| |||| |||||    
T  4833581 ctaaagcgacactcattttaaaatggagggaata 4833548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 33822646 - 33822419
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       ||| |||| ||| | |||||||||||| |||||||||||||||||||||||||||||||    
T  33822646 tgaatgtcactttacattttcaatacaactttaattttgttctttcaactttaccttcaataaatacttcaacttttctctctcacacaattttcaatgc 33822547  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||||  ||||||||||||||| |||    
T  33822546 aactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgctataacatttgactattttatttcattaattaatctgtgtgcaattgg 33822447  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
     |||| ||| | ||||||| ||||||||    
T  33822446 ttaaaacgatattcattttgaaacggag 33822419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 108 - 326
Target Start/End: Complemental strand, 793749 - 793531
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       ||||||||  || ||||||||||||||  ||||||||||||||||||||||||||||||    
T  793749 tgaatgtcactttacatttccaatacaactttaatttttttcttccaactctaccctcaataaatacttaaacttttctctctcacacaattttcaatgc 793650  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||| ||||||||| |||    
T  793649 aactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgctatgacattggactactttattccattccttaatttgtgtgcaattgg 793550  T
Q  308 ctaaagcgacactcatttt 326  Q
    ||||| || ||||||||||    
T  793549 ctaaaacggcactcatttt 793531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 168 - 335
Target Start/End: Complemental strand, 36296217 - 36296050
Alignment:
Q  168 taaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacat 267  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||| || ||||||||||||||||||| ||| ||||    
T  36296217 taaacactccaacttttctcgctcacacaattttcaatgcaactttaagtttgtcttgttcctataaattaaggttattttagtaaaattgctattacat 36296118  T
Q  268 ttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||| || |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  36296117 ttgattattttatttcattctttaatccatgtgcaattggctaaagcgacactcattttaaaacggag 36296050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 118 - 331
Target Start/End: Complemental strand, 33585108 - 33584897
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||||||||||||||||||       |||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33585108 tttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttctgtctcacacaattttcaatgcaactttaagt 33585009  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| ||  | ||||||| ||||||||||||||||||||||||||||||||||| |||||| | ||  ||||||   |||||| ||| |||||||||    
T  33585008 ttgtcttgttcatgtaaagtaaggttattttagtaaaattgttatgacatttgactattttattccgtttcttaatc--cgtgcaattggttaaagcgac 33584911  T
Q  318 actcattttaaaac 331  Q
    ||| ||||||||||    
T  33584910 acttattttaaaac 33584897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 108 - 331
Target Start/End: Original strand, 36660437 - 36660656
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| ||||||||||||||||| ||||||||||    ||||||||  || |    
T  36660437 tgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccagcttttctctc----acaattttttatac 36660532  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| ||  |||||||||||| ||||||| |   ||| || || ||||||||| ||||||||||||||| | |    
T  36660533 aactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtgtgcaattag 36660632  T
Q  308 ctaaagcgacactcattttaaaac 331  Q
    ||||||||||||||||||| ||||    
T  36660633 ctaaagcgacactcattttgaaac 36660656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 162 - 330
Target Start/End: Complemental strand, 32963098 - 32962931
Alignment:
Q  162 cctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgtta 261  Q
    ||||||||||||||| ||||||||| | ||| ||||||| |||||||| |||||||||||||| || ||||||||||  ||||||||| ||||| || ||    
T  32963098 cctcaataaatactctaacttttctttttcaaacaatttccaatgcaa-tttaagtttgtctttttcttataaagtaaagttattttaataaaactgcta 32963000  T
Q  262 tgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||| ||||||||| |||||||||  ||||||||||||||| | | ||||||||||||||||||||||    
T  32962999 tgacaattgactactctatttcattaattaatctgtgtgcaattagttaaagcgacactcattttaaaa 32962931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 335
Target Start/End: Original strand, 29044770 - 29044950
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||||| ||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||    
T  29044770 cttccaactttatcctcaataaatgctcaaacttttctctc-cacacaattttcaatgcaactttaagtttatcttattcttataaagtaagattatttt 29044868  T
Q  249 agtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||     |||||||||  |||| |||||| ||||  || ||||| |||||||| | ||||||||| ||||    
T  29044869 agtaaaattgttatgacat-----tactttattctattccttaatccgtgtataattggctgaagcgacatttattttaaaatggag 29044950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 34171174 - 34171391
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||        ||||||| ||| | ||||||||||||| ||||||||||||  ||| ||||||||||||    
T  34171174 tgaatgtcactttacattttcaatacaactttaattttttt-ttccaactttaccttcaataaatactcaaacttttctctc--acagaattttcaatgc 34171270  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||  ||||||||||||       ||| ||||| |||||| |  ||||| | |    
T  34171271 aactttaagtttgtcttgttcttataaagtaaggttattttagtaaaatttctatgacatttga-------attccattccttaatccgcctgcaatttg 34171363  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||| ||||||||||||||||||||||    
T  34171364 ctaaaacgacactcattttaaaacggag 34171391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 166792 - 166567
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||||||    
T  166792 tgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttttctc--acacaattttcaatgc 166695  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| ||  |||||   | ||  | |||||||||| ||||||  |   ||| || || ||||||||| ||||||||||||||| |||    
T  166694 aactttaagtttgtctttttcatataatacaagggcagtttagtaaaagtgttatttctaatgattatttcatttcattccttaatctgtgtgcaattgg 166595  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    |||| |||||||||||||| ||||||||    
T  166594 ctaacgcgacactcattttgaaacggag 166567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 4751632 - 4751452
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||||| ||| ||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||| || ||  ||||||  | || |  |||    
T  4751632 cttccaactttaccctcaataaatactccaacttttttctc--acacaattttcaattcaactttaagtttgtttttttcatataaaacaagggttgttt 4751535  T
Q  249 agtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||| ||||||| |   ||| || || ||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||    
T  4751534 agtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtgtgcaattggctaaaacgacactcattttaaaac 4751452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 335
Target Start/End: Complemental strand, 43257925 - 43257779
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattc 287  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||| ||  | ||||||| || ||||||| |   ||| || || |||||||||    
T  43257925 tctcacacaattttcaatgcaactttaagtttgtctatttcttataaagtaagggcagtttagtataagtgttatgtctaatgattatttcatttcattc 43257826  T
Q  288 tttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||    
T  43257825 tttaatctgtgtgcaattggctaaaac-acactcattttaaaacggag 43257779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 26660904 - 26660989
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  26660904 gtaaaattgctatgacatttgacaactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggag 26660989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 26932497 - 26932582
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  26932497 gtaaaattgctatgacatttgacaactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggag 26932582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 4742368 - 4742188
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||||| ||| ||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||| || ||  ||||||  | || |  |||    
T  4742368 cttccaactttaccctcaataaatactccaacttttttctc--acacaattttcaattcaactttaagtttgtttttttcatataaaacaagggttgttt 4742271  T
Q  249 agtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||| ||||||| |   ||| || || ||||||||| ||||| ||||||||| || ||||| ||||||||||||||||||    
T  4742270 agtaaaagtgttatgtctgatgattatttcatttcattccttaatatgtgtgcaattgactaaaacgacactcattttaaaac 4742188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 42661943 - 42661861
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||    
T  42661943 gtaaaattgttatgacatttgactattttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacg 42661861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 34972653 - 34972568
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| || ||||||||||||||||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  34972653 gtaaaattgatacgacatttgactactttattccatttattaatctgtgtgcaattggctaaagcgacactcattttaaaacggag 34972568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 42104066 - 42103981
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  42104066 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggag 42103981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 335
Target Start/End: Original strand, 36783375 - 36783590
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| |||||||||| |||       |||| ||| ||| ||| | ||||| ||||||||||||||  |||||||||||||||||||||||||| |    
T  36783375 tttacatttccaatacaactctaatttttttcttctaactttacccttagtaaattctccaacttttctc--tcacacaattttcaatgcaactttaaat 36783472  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| ||  ||  ||||| ||  | |||||||||| ||||||| |   ||| || || |||||||   ||||||||||||||| ||||||||||||     
T  36783473 ttgtctttttcataacaagtaagggcaatttagtaaaaatgttatgtctaatgattatttcatttcatctcttaatctgtgtgcaattggctaaagcgat 36783572  T
Q  318 actcattttaaaacggag 335  Q
    ||||||||| ||||||||    
T  36783573 actcattttgaaacggag 36783590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 39566333 - 39566418
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| || ||| |||||||||||||||||| ||| ||||    
T  39566333 gtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgtaattggttaaagcgacactcattttgaaatggag 39566418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 2729789 - 2729705
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||| |||||||    
T  2729789 gtaaaattgctatgacgtttgactactttatttcattccttaatctgtatgcaattggctaaagcgacaatcattttgaaacgga 2729705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 42978076 - 42977996
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||| ||||||||||| |||||    
T  42978076 gtaaaattgctatgacatttgactactttatttcattccttaatctgtgtgaaattggctaaaacgacactcattctaaaa 42977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 39730096 - 39730178
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| |||||||||||||||||||    
T  39730096 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattgcctaaaacgacactcattttaaaacg 39730178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 8336410 - 8336325
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| | |||| || |||||||| ||||||||||||||||| ||||    
T  8336410 gtaaaattgttatgacatttgactactttattccattccttaatatttgtgtaattggctaaaacgacactcattttaaaatggag 8336325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 39059816 - 39060034
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||| | ||||||||||||||||||||||||       |||| ||| ||| |||||||||||||||||| |||| ||||  | ||||||||||||||    
T  39059816 tgaatgttgctttacattttcaatacaactttaatttttt-cttctaactttaccctcaataaatactccaaattttttctc--atacaattttcaatgc 39059912  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||| || ||  ||||||  | || || |||||||||| ||||||| |   |||     ||||||||||| ||||||| ||| ||| |||    
T  39059913 aactttaagtttgtttttttcatataaaacaagggtagtttagtaaaagtgttatgtctaatga-----ttatttcattccttaatctatgtacaattgg 39060007  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
    |||||| || ||||||||| |||||||    
T  39060008 ctaaagtgatactcatttttaaacgga 39060034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 338
Target Start/End: Complemental strand, 12167688 - 12167525
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| | | || |||||||||| ||  | |||||||||| |||| || |   ||| |    
T  12167688 ctccaacttttctctcacaca-aattttcaatgcaactttaagtttgaccttttcttataaagtaagggcagtttagtaaaagtgttttgtctaatgatt 12167590  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    | || |||  |||  ||||| ||||||||| | |||||||||||||||||||| |||||||||||    
T  12167589 atttcattcaatttcttaatttgtgtgcaattagctaaagcgacactcattttgaaacggagaga 12167525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 21375653 - 21375569
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| ||||| ||||||||| |||||| ||||||||||||| ||||||| ||||||||| |||||||||||| |||||||    
T  21375653 gtaaaattgctatgatatttgactattttattccattctttaatctttgtgcaattggctaaagtgacactcattttgaaacgga 21375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 39504875 - 39504959
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||  | || || |||||||||||||||||||||||||||    
T  39504875 gtaaaattgttacgacattttactactttatttcattctttaatatgtacgtaattgactaaagcgacactcattttaaaacgga 39504959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 6519128 - 6519211
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| |||||| || |  ||||| |||||||||||||||||||||    
T  6519128 taaaattgttatgacattttactactttatttcattccttaatatgtgtgtaattaactaaaacgacactcattttaaaacgga 6519211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 3306012 - 3305923
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt-aaaacggagaga 338  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |  |||||| ||| |||| ||||||||||||| ||||||||||||    
T  3306012 gtaaaattgctatgacatttgactactttatttcattccttaatatacgtgcaattggttaaaacgacactcattttgaaaacggagaga 3305923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 14620496 - 14620424
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcat 323  Q
    |||||||| ||||||||||||||||||||||  |||| ||||| ||||||||| |||||||||||||||||||    
T  14620496 taaaattgctatgacatttgactactttattctattccttaatatgtgtgcaattggctaaagcgacactcat 14620424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 15400181 - 15400407
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| ||||||||||||||| ||||||  ||||||| ||||||| |||||     
T  15400181 tgaatgtcactttacatttccaatacaactttaattttcttcttccaactttatcctcaataaatactcaaacttt--tctctcatacaatttccaatga 15400278  T
Q  208 aactttaagtttgtcttatttttataaagt-acggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    ||||||||||||  ||| || ||||||||| | ||  |||||||||||| ||||||  |   | | || || |||  ||| |||||||||||||| |       
T  15400279 aactttaagttttcctttttcttataaagtaaagggaattttagtaaaagtgttatatctaataattatttcattcaattttttaatctgtgtgccaaca 15400378  T
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
     ||||| ||||||||||||||||||||||    
T  15400379 cctaaaacgacactcattttaaaacggag 15400407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 38982288 - 38982174
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||| |||| ||||||||||||||       || ||||| ||| ||||||||||||||| |||||||||||| ||||  |||||||||||    
T  38982288 tgaatgtcactttatatttccaatacaactttaatttttttctcccaactttaccctcaataaatactcaaacttttctctcgcaca--attttcaatgc 38982191  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||||||||||||    
T  38982190 aactttaagtttgtctt 38982174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 13066723 - 13066827
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||| ||||||||||||||        ||||||| ||| ||||||||||||||||||||||  |||||  |||||||||||||||    
T  13066723 tgaatgtcattttacatttccaatacaactttaattttttttttccaactttaccctcaataaatactccaacttt--tctcttgcacaattttcaatgc 13066820  T
Q  208 aacttta 214  Q
    |||||||    
T  13066821 aacttta 13066827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 27600555 - 27600629
Alignment:
Q  261 atgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||| |||||||||||||||||||||| ||||| ||||| ||| ||||||||| |||||||||||||||| ||||    
T  27600555 atgatatttgactactttatttcattccttaatatgtgttcaattggctaaagtgacactcattttaaaatggag 27600629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 34919847 - 34919961
Alignment:
Q  212 ttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaa 311  Q
    ||||||||||||| || |||||||||| ||  | ||||||||||||| |||| |   ||| || |||||||||||| |||||||||||| || |||||||    
T  34919847 ttaagtttgtctttttcttataaagtaagggcagtttagtaaaattgctatgtccaatgattattttatttcattccttaatctgtgtgtaattggctaa 34919946  T
Q  312 agcgacactcatttt 326  Q
    ||||| |||||||||    
T  34919947 agcgatactcatttt 34919961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 34446021 - 34445952
Alignment:
Q  260 tatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaa 329  Q
    ||||| |||||||||||||||||||||| ||||| | ||||||| ||| |||||||||||||||||||||    
T  34446021 tatgatatttgactactttatttcattccttaatatatgtgcaattggttaaagcgacactcattttaaa 34445952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 14006042 - 14006118
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    ||||||| | |||||||||||||||||||||||||||| ||||| | | ||||| |||||||||| |||||||||||    
T  14006042 gtaaaatagctatgacatttgactactttatttcattccttaatatatatgcaattggctaaagcaacactcatttt 14006118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 15567056 - 15567148
Alignment:
Q  243 tattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||| |||||||||| ||||| |||||||||  | ||| ||||| |||||||||||| || |||||||||||||||||||||| ||| ||||    
T  15567056 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaatggag 15567148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 27810356 - 27810470
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       ||| |||| ||| ||||||||||||||| ||||||  | |||||||||||||||||| |    
T  27810356 tgaatgtcactttacattttcaatacaactttaatttttttctttcaactttatcctcaataaatactcaaacttt--tttctcacacaattttcaatac 27810453  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||| ||| ||||    
T  27810454 aactttaaatttatctt 27810470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 31557478 - 31557356
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||||||||||||||||||       |||||||| |||   |||||||||||        |  ||||||||||||||||||||||    
T  31557478 tgaatgtcattttacattttcaatacaactttaatttttttcttccaactttattttcaataaatac--------tattctctcacacaattttcaatgc 31557387  T
Q  208 aactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||||||||| || ||||||||||    
T  31557386 aactttaagtttgtctttttcttataaagta 31557356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 28640102 - 28640211
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||||||| |||||||||       || ||||| ||| |||||||||||||| |||||||||||||  |||  ||||||||| |||||||||||    
T  28640102 tttacattttcaattcaactttaatttttttctcccaactttaccctcaataaatacttcaacttttctctcgaaca--attttcaatacaactttaagt 28640199  T
Q  218 ttgtcttatttt 229  Q
    ||||||| ||||    
T  28640200 ttgtcttttttt 28640211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 335
Target Start/End: Complemental strand, 14980111 - 14979969
Alignment:
Q  193 cacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaa 292  Q
    ||||||||||||||||||||||| |||||||| || |||||||||| ||  | ||| |||||| ||||||  |   ||| || || ||| ||||  ||||    
T  14980111 cacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattccatttcttaa 14980012  T
Q  293 tctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |  | ||||||||||||||||||| ||||||||    
T  14980011 tctgtgtgccaaagcctaaagcgacactcattttgaaacggag 14979969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 21319306 - 21319246
Alignment:
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||||    
T  21319306 ctttatttcattccttaatctatgtgcaaatggctaaagcgacacttattttaagacggag 21319246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 31889805 - 31889857
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  31889805 tctctcacacaattttcaatgcaactttaattttgtctttttcttataaagta 31889857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 4371383 - 4371476
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaacttt 213  Q
    ||||||||| ||||||||||||||       || | ||| ||| ||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  4371383 tttacatttccaatacaactttaatttttttctccaaactttaccctcaataaatactcaaacttttctc--tcacacaattttcaatgcaacttt 4371476  T

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Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 12992074 - 12992176
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| ||||||||||  |||||||||||||        ||||||| ||| ||||||||||||||||||||||  |||||  |||||||||||||||    
T  12992074 tgaatgtcattttacatttctaatacaactttaatttttt--ttccaactttatcctcaataaatactccaacttt--tctcttgcacaattttcaatgc 12992169  T
Q  208 aacttta 214  Q
    |||||||    
T  12992170 aacttta 12992176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 32690819 - 32690760
Alignment:
Q  163 ctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    ||||||||||||| ||||||||||||| ||||  |||||||||||||||||| |||||||||    
T  32690819 ctcaataaatacttcaacttttctctcgcaca--attttcaatgcaactttaggtttgtctt 32690760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 1513043 - 1513100
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 221  Q
    ||||||| ||||| |||||||||| ||| |||||||||||| ||||||||||||||||    
T  1513043 tcaataagtactctaacttttctccctctcacaattttcaaagcaactttaagtttgt 1513100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 335
Target Start/End: Complemental strand, 4967546 - 4967409
Alignment:
Q  198 ttttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgt 297  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||  | ||||||||||  |||||  |   ||| || || ||| ||||  |||||||||    
T  4967546 ttttcaatgcaactttaattttgtcttttttttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcattccatttcttaatctgt 4967447  T
Q  298 gtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||  |  | ||||||||||||||||||| ||||||||    
T  4967446 gtgtcaaagcctaaagcgacactcattttgaaacggag 4967409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 29807317 - 29807232
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||  ||| ||||||||||| |||||| ||||| ||||| || |||| | |||||||||||||||| ||||| ||||||||    
T  29807317 gtaaaatttctattacatttgactaatttattccattccttaatatgcgtgctattggctaaagcgacacttattttgaaacggag 29807232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 39335206 - 39335121
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||| |||||| ||||||||||||||||  |||| ||||| | | ||||| || ||||| ||||| ||||||||||||||||    
T  39335206 gtaaaattattatgatatttgactactttattcaattccttaatttatatgcaattgactaaaacgacattcattttaaaacggag 39335121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 24436514 - 24436458
Alignment:
Q  279 atttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||| |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  24436514 attttattccttaatctatgtgcaattggctaaaacgacactcattttaaaacggag 24436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 334
Target Start/End: Original strand, 33693819 - 33693964
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattc 287  Q
    ||||||||||||||||||||||||||||| || |  | |||||||||| || ||  |  ||||||||| ||||| | |   ||| || || ||| |||||    
T  33693819 tctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggca-gttagtaaaagtgttacgtctaatgattatttcattgcattc 33693917  T
Q  288 tttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| | |||| || |||||||| ||||||| |||||||||||||    
T  33693918 tttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 33693964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 334
Target Start/End: Complemental strand, 8961101 - 8960954
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    |||||||||||||||||| ||||||||||| ||| |||| || ||||||| ||  |  | |||||||||| ||||||| |   ||| || ||||||  ||    
T  8961101 tctctcacacaattttcattgcaactttaaatttatctttttcttataaaata-agacagtttagtaaaagtgttatgtctaatgattattttattatat 8961003  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    || ||||| | |||| || ||  |||| |||||||||||||||||||||    
T  8961002 tccttaatatatgtgtaattgagtaaaacgacactcattttaaaacgga 8960954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 351
Target Start/End: Original strand, 16886152 - 16886320
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||       || |||||||||| ||  | |||||||||  ||||| | |   | | |    
T  16886152 ctccaacttttctatc--acacaattttcaatgcaactttaagtt-------ttgttataaagtaagggcagtttagtaaatgtgttacgtctaataatt 16886242  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaataaaaggtaaaa 351  Q
    | || ||||||||| || ||||||| |||| |||||||| |||||||||| |||||| |||| |||||| || |||||    
T  16886243 atttcatttcattccttgatctgtgcgcaattggctaaaacgacactcatgttaaaatggagggaataatagttaaaa 16886320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 4011725 - 4011678
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaa 235  Q
    |||||||||||||||||||||||||||| ||| |||| || |||||||    
T  4011725 tctcacacaattttcaatgcaactttaattttatctttttcttataaa 4011678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 7145032 - 7145083
Alignment:
Q  284 attctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||| ||||| ||||||||| |||||||||| ||||||||||| ||||||||    
T  7145032 attccttaatttgtgtgcaattggctaaagcaacactcattttgaaacggag 7145083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 13761880 - 13761954
Alignment:
Q  262 tgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggaga 336  Q
    |||||||||| ||||||||| ||||  ||||| | | ||||| || ||||| ||||| |||||||||||||||||    
T  13761880 tgacatttgattactttattccatttcttaatttatttgcaattgactaaaacgacattcattttaaaacggaga 13761954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 21375545 - 21375487
Alignment:
Q  277 ttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||| ||||| ||||||||||||||| ||||||||| | |||| ||||| ||||||||    
T  21375545 ttattccattcattaatctgtgtgcaattggctaaagtggcacttattttgaaacggag 21375487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 34208918 - 34208852
Alignment:
Q  266 atttgactactttatttcattctttaatctgtgtgcaagtggctaaagc-gacactcattttaaaac 331  Q
    |||||||||||||||||||||| ||||| ||||||||| | |  ||||| |||||||||||| ||||    
T  34208918 atttgactactttatttcattccttaatttgtgtgcaatttgaaaaagcagacactcattttgaaac 34208852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 335
Target Start/End: Complemental strand, 7317016 - 7316988
Alignment:
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||    
T  7317016 gctaaagcgacactcattttaaaacggag 7316988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 335
Target Start/End: Complemental strand, 15566486 - 15566458
Alignment:
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||    
T  15566486 gctaaagcgacactcattttaaaacggag 15566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 36164879 - 36164843
Alignment:
Q  305 tggctaaagcgacactcattttaaaacggagagaata 341  Q
    |||||||| |||||||||||||||||| |||||||||    
T  36164879 tggctaaaacgacactcattttaaaaccgagagaata 36164843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 118 - 332
Target Start/End: Complemental strand, 44582913 - 44582699
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| ||||||||||||||       |||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  44582913 tttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctatctcacataattttcaatgcaactttaagt 44582814  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| || |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||    
T  44582813 ttgtctttttcttataaagtaagattattttagtaaaattgttatgacatttgactactttatttcattcattaatctgtgtgcaattcactaaagcgac 44582714  T
Q  318 actcattttaaaacg 332  Q
    |||||||||||||||    
T  44582713 actcattttaaaacg 44582699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 255057 - 254829
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||| ||||||||| |||| |||||||||        |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  255057 tgaatgtcgctttacatttccaatgcaactttaattttttttcttccaactttaccctcaataaatactccaacttttctcactcacacaattttcaatg 254958  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||  |||||||||||| || ||    
T  254957 caactttaagtttgtctttttcttataaagtagggttattttagtaaaattgctatgacatttgactactttagttcatttcttaatctgtgtgtaattg 254858  T
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
     ||||||||||||||||||| ||||||||    
T  254857 actaaagcgacactcattttgaaacggag 254829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 28200368 - 28200141
Alignment:
Q  108 tgaatgtcgttttacattttcaa-tacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||| | ||||||||||| | |||||||||       |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||     
T  28200368 tgaatgtcgctctacattttcaaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcgcacaattttcaata 28200269  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    ||||||||||||||| || || |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||  |||  ||||||||||||||| ||    
T  28200268 caactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgacaactttattcaatttcttaatctgtgtgcaattg 28200169  T
Q  307 gctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||||||||||||    
T  28200168 gctaaagcgacactcattttaaaacgga 28200141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 108 - 344
Target Start/End: Original strand, 26252127 - 26252363
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||| ||       |||||||| ||| ||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  26252127 tgaatgtcactttacatttccaatacaacttaaatttttttcttccaactttacccttaataaatactctaacttttttctctcacacaattttcaatgc 26252226  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || ||||||| || |||||||||||||||||||  ||||||||||||||||| ||  ||||| ||||||||||||||| |||    
T  26252227 aactttaagtttgtcttgttcttataaaataaggttattttagtaaaattgcaatgacatttgactacttaatcccattccttaatctgtgtgcaattgg 26252326  T
Q  308 ctaaagcgacactcattttaaaacggagagaataaaa 344  Q
     |||||| ||||||||||| |||||||||||||||||    
T  26252327 ttaaagcaacactcattttgaaacggagagaataaaa 26252363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 2459017 - 2459240
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| |||||||||||||| |||||||||       |||||||| ||| |||||| |||||||| ||||||||||||    |||||||||||| |    
T  2459017 tgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaacaaatactcaaacttttctctc----acaattttcaatac 2459112  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||| || || |||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||  ||||||||||||||| |||    
T  2459113 aactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactacttcatttaatttcttaatctgtgtgcaattgg 2459212  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||| ||||||||    
T  2459213 ctaaagcgacactcattttgaaacggag 2459240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 110 - 334
Target Start/End: Complemental strand, 5854367 - 5854143
Alignment:
Q  110 aatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaa 209  Q
    ||||||| ||||||||| |||| |||||||||        ||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  5854367 aatgtcgctttacatttccaatgcaactttaatttttttattccaactttatcctcaataaatactccaacttttcgatctcacacaattttcaatgcaa 5854268  T
Q  210 ctttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggct 309  Q
    | ||||| ||||||| || ||||||||||  ||||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||| |||||    
T  5854267 ccttaaggttgtctttttcttataaagtaaagttattttagtaaaattgttatgacatttaactactttattctattccttaatctgtgtgcaattggct 5854168  T
Q  310 aaagcgacactcattttaaaacgga 334  Q
    |||| |||||||||||| |||||||    
T  5854167 aaagtgacactcattttgaaacgga 5854143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 110 - 335
Target Start/End: Complemental strand, 42650391 - 42650167
Alignment:
Q  110 aatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaa 209  Q
    ||||||| |||||||||  |||||||||||||       |||||| | ||| | |||| ||||||| |||||||| ||||||||||||||||||||||||    
T  42650391 aatgtcgctttacatttctaatacaactttaatttttttcttccagctttaccttcaagaaatacttcaactttt-tctctcacacaattttcaatgcaa 42650293  T
Q  210 ctttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggct 309  Q
     |||||||||||||| || ||||||| || ||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  42650292 ttttaagtttgtctttttcttataaactaaggttattttagtaaaattgctatgacatttgattactttatttcagtctttaatctgtgtgcaattggct 42650193  T
Q  310 aaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||| ||| ||||    
T  42650192 aaagcgacattcattttgaaagggag 42650167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 108 - 333
Target Start/End: Original strand, 22664948 - 22665169
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||| ||||       |||||||| ||| ||||||||||||||||||||| ||||||    |||||||| ||| |    
T  22664948 tgaatgtcactttacatttccaatacaacgttaattaatttcttccaactttaccctcaataaatactccaacttctctctc----acaatttttaattc 22665043  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| ||||| ||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||| ||     
T  22665044 aactttaagtttgtcttgttcttataaagtaaggttagtttagtaaaattgctatgatatttgactactttattccattcgttaatctgtgtgcaattga 22665143  T
Q  308 ctaaagcgacactcattttaaaacgg 333  Q
    ||||||||||||||||||||||||||    
T  22665144 ctaaagcgacactcattttaaaacgg 22665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 175 - 332
Target Start/End: Complemental strand, 50591396 - 50591239
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| ||  |||||| || |||||||||||||||||||||||||||||| ||||    
T  50591396 tccaacttttctctatcacacaattttcaatgcaattttaagtttgtcttgttcctataaaataaggttattttagtaaaattgttatgacattttacta 50591297  T
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||||||||    
T  50591296 ctttattccattccttaatctgtgtacaattggctaaagcgacactcattttaaaacg 50591239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 186 - 330
Target Start/End: Original strand, 49894867 - 49895011
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||    
T  49894867 tctctcacacaattttcaatgtaactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgttatgacatttgactattttattccat 49894966  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    || ||||||||||||||| |||| ||| |||||||||||||||||    
T  49894967 tccttaatctgtgtgcaattggccaaaacgacactcattttaaaa 49895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 149 - 326
Target Start/End: Complemental strand, 672383 - 672209
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||||| ||| ||||||||||||||| ||||||||||||  |||||||||||||||||| |||||||||||||| || |||||| ||| |||||||||    
T  672383 cttccaactttaccctcaataaatactctaacttttctctc--acacaattttcaatgcaaatttaagtttgtctttttcttataa-gtaaggttatttt 672287  T
Q  249 agtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    |||||||||| ||||| |||||||||||||||| |||||| |||||||||||||| ||| |||| |||||||||||||    
T  672286 agtaaaattgatatgatatttgactactttattccattctataatctgtgtgcaattggttaaaacgacactcatttt 672209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 11134604 - 11134378
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||||||||||| |||||||||        ||||||| ||  |||||||||||||||||||||||||||||| |||||||| ||||||    
T  11134604 tgaatgtcactttacattttcaatgcaactttaatttcttt-ttccaactttgccctcaataaatactccaacttttctctctctcacaatttccaatgc 11134506  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||| ||||||||||||  |   |||||||| || ||||||||||||| ||| ||||||||||||||||||||| ||||| ||||| ||||||||| |||    
T  11134505 aactataagtttgtctttgtcaaataaagtaaggctattttagtaaaactgtcatgacatttgactactttattccattccttaatatgtgtgcaattgg 11134406  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||| ||||||||||||| ||| ||||    
T  11134405 ctaaaacgacactcattttgaaatggag 11134378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 172 - 334
Target Start/End: Complemental strand, 9552436 - 9552276
Alignment:
Q  172 tactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttga 271  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||| || |||||||||| | ||||||||||||||||| ||||||||||||    
T  9552436 tactcaaacttttttctctcacataattttcaatgcaactttaagattgtcttgttcttataaagtaagtttattttagtaaaattgctatgacatttga 9552337  T
Q  272 ctactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||| ||||||| ||| ||| || ||||  ||||||| |||||||||||||    
T  9552336 ctactttatttcattcattaatctatgtacaattgactaa--cgacacttattttaaaacgga 9552276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 118 - 331
Target Start/End: Complemental strand, 28751541 - 28751330
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||||||||||||||||||       |||||||| ||| ||||||||||||||| |||||||||||| ||||  |||||||||| ||||||||||    
T  28751541 tttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcgcaca--attttcaatgtaactttaagt 28751444  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||| | || |||||||||| ||  | |||||||||| ||||||| |   ||| || |||||||||||| ||||||||||||||| |||||||| ||||    
T  28751443 ttgtccttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattattttatttcattccttaatctgtgtgcaattggctaaaacgac 28751344  T
Q  318 actcattttaaaac 331  Q
    ||||||||| ||||    
T  28751343 actcattttgaaac 28751330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 108 - 320
Target Start/End: Original strand, 44024554 - 44024766
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||| || |||||||||||||| |||||||||       |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||      
T  44024554 tgaatgccgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctctcacacaattttcaattt 44024653  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| |   |||||| || ||||||||||||||||||| ||| |||||| ||||||||||| ||||  |||||  |||||  | |||    
T  44024654 aactttaagtttgtcttgtccctataaaataaggttattttagtaaaattgctataacatttaactactttattacatttcttaatgcgtgtgttattgg 44024753  T
Q  308 ctaaagcgacact 320  Q
    ||||| |||||||    
T  44024754 ctaaaccgacact 44024766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 112 - 293
Target Start/End: Complemental strand, 17806514 - 17806335
Alignment:
Q  112 tgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaact 211  Q
    ||||| ||||||||| ||||||||||||||       |||||||  ||| | ||||||||||||||||||||||||||  | |||||||||||||||| |    
T  17806514 tgtcgctttacatttccaatacaactttaattttttacttccaattttaccttcaataaatactccaacttttctctc--atacaattttcaatgcaatt 17806417  T
Q  212 ttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaat 293  Q
    ||||||||||||| || |||||||| |  ||||||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  17806416 ttaagtttgtctttttcttataaaggaaagttattttagtaaaattgttatgacatttaactactttatatcattccttaat 17806335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 5317720 - 5317496
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||| |||||||||||||||||       |||||||| ||| |||||||||||||| |||||||||||||   |||||||||||||||    
T  5317720 tgaatgtcactttacaatttcaatacaactttaatttttttcttccaactttaccctcaataaatactacaacttttctctc---cacaattttcaatgc 5317624  T
Q  208 aactttaagtttgtcttatttttataaagt-acggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    ||||||||||||||||| || ||||||| | | ||  | |||||||||| ||||||| |   ||| || || ||||||||| ||||||| ||| | | ||    
T  5317623 aactttaagtttgtctttttcttataaaataaggggcaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctatgtactattg 5317524  T
Q  307 gctaaagcgacactcattttaaaacgga 334  Q
     ||||| |||||||||||||||||||||    
T  5317523 cctaaaacgacactcattttaaaacgga 5317496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 326
Target Start/End: Original strand, 9333160 - 9333305
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    |||||||||| |||||||||||||||||||| |||      |||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||    
T  9333160 tccaacttttatctctcacacaattttcaatacaa------gtttgtcttattcttataaagtaaggttgttttagtaaaattgctatgacatttgacta 9333253  T
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    ||||||||||||| ||||||||| |  || ||| |||| ||| |||||||||    
T  9333254 ctttatttcattccttaatctgtatataattggttaaatcgatactcatttt 9333305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 326
Target Start/End: Original strand, 9356933 - 9357078
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    |||||||||| |||||||||||||||||||| |||      |||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||    
T  9356933 tccaacttttatctctcacacaattttcaatacaa------gtttgtcttattcttataaagtaaggttgttttagtaaaattgctatgacatttgacta 9357026  T
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    ||||||||||||| ||||||||| |  || ||| |||| ||| |||||||||    
T  9357027 ctttatttcattccttaatctgtatataattggttaaatcgatactcatttt 9357078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 118 - 333
Target Start/End: Complemental strand, 17919953 - 17919741
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| ||||||||||||||       |||||||| ||| |||||||| |||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  17919953 tttacatttccaatacaactttaatttttttcttccaactttaccctcaatatatactctaacttttttctc--acacaattttcaatgcaactttaagt 17919856  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| ||  ||||||  | ||  | |||||||||| |||||||  |  ||| || || ||||||||| ||||||||| || || |||||||||||||    
T  17919855 ttgtctttttaatataaaacaagggcagtttagtaaaagtgttatgtta-atgattatttcatttcattcattaatctgtatgtaattggctaaagcgac 17919757  T
Q  318 actcattttaaaacgg 333  Q
    ||||||||| ||||||    
T  17919756 actcattttgaaacgg 17919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 108 - 326
Target Start/End: Original strand, 12002255 - 12002471
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||| ||||||||||||||       |||||| | ||| | ||||||||||||||||||||| ||||  ||||||||||||||||    
T  12002255 tgaatgtcattttacatttccaatacaactttaatttttttcttccagctttaccttcaataaatactccaacttttttctc--acacaattttcaatgc 12002352  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| ||  ||||||  | ||  | |||||||||| | ||||| |   ||| || || ||||||||| ||||| ||||||||| ||     
T  12002353 aactttaagtttgtctttttcatataaaacaagggcagtttagtaaaagtattatgtctgatgattatttcatttcattccttaatatgtgtgcaattgt 12002452  T
Q  308 ctaaagcgacactcatttt 326  Q
    ||||| |||||||||||||    
T  12002453 ctaaaacgacactcatttt 12002471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 332
Target Start/End: Complemental strand, 24041100 - 24040945
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||| || |||||||||| ||  | |||||||||| ||||||| |   ||| ||    
T  24041100 tccaacttttc--tctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgatta 24041003  T
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
     || ||| ||||| ||||||  |||| || ||||||||||||||||||||||||||||    
T  24041002 tttcattccattccttaatccatgtgaaattggctaaagcgacactcattttaaaacg 24040945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 331
Target Start/End: Complemental strand, 84585 - 84440
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    |||||| |||||||||||||||||||||||||||||||| || |||||||||| ||  |||||||||||| ||||||| |   ||| || || |||  ||    
T  84585 tctctcgcacaattttcaatgcaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatttcattcaat 84486  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    || ||||||||||||||| || ||||||||||||||||||| ||||    
T  84485 tccttaatctgtgtgcaattgactaaagcgacactcattttgaaac 84440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 108 - 255
Target Start/End: Original strand, 11650067 - 11650212
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| |||||||||||||||||| |||||||  ||||||||||| ||||||    
T  11650067 tgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaatttttctc--tcacacaatttccaatgc 11650164  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    ||||||||||||||||| || || ||||||| ||  | ||||||||||    
T  11650165 aactttaagtttgtctttttcttttaaagtaagggcagtttagtaaaa 11650212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 37437476 - 37437331
Alignment:
Q  181 ttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaat-tgttatgacatttgactacttta 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| ||  | ||||||||||  ||||||| |   ||| || || |    
T  37437476 ttttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaaagtgttatgtctaatgaatatttca 37437377  T
Q  280 tttcattctttaatctgtgtgcaagtggctaaagcgacactcattt 325  Q
    |||||||| ||||| |||||||||  ||||||||||||||||||||    
T  37437376 tttcattccttaatatgtgtgcaatgggctaaagcgacactcattt 37437331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 49468712 - 49468627
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  49468712 gtaaaattgctatgacatttgactattttatttcattccttaatctgtgtgcaattggctaaagcgacactcattttgaaatggag 49468627  T

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Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 2245806 - 2245923
Alignment:
Q  119 ttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtt 218  Q
    |||||||||||||||||||||||       ||| |||| ||| ||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||    
T  2245806 ttacattttcaatacaactttaatctttttctttcaactttaccctcaataaatactcaaacttttctctctttcacaattttcaatgcatctttaagtt 2245905  T
Q  219 tgtcttatttttataaag 236  Q
    |||||| || ||||||||    
T  2245906 tgtctttttcttataaag 2245923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 32806939 - 32806851
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||| ||||||| |||||||||||    
T  32806939 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaactggctaaagcgacaatcattttgaaacggagaga 32806851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 161 - 335
Target Start/End: Complemental strand, 50349953 - 50349775
Alignment:
Q  161 acctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttg------tcttatttttataaagtacggttattttagtaaa 254  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||      ||||||  |||||||||| ||  | |||||||||    
T  50349953 acctcaataaatactcaaacttttctctc--acacaattttcaatgcaactttaagtttgtctttttcttataattataaagtaagggcagtttagtaaa 50349856  T
Q  255 attgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    | ||||||| |   ||| || || ||| ||||| ||||| ||||| ||| |||||||||| ||||||||||| ||||||||    
T  50349855 agtgttatgtctaatgattatttcattccattccttaatttgtgttcaattggctaaagcaacactcattttgaaacggag 50349775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 5463725 - 5463809
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||| | ||||||| |||||||||||||||||||||| |||||||    
T  5463725 gtaaaattgttatgacaattgactactttattgcattccttaatatatgtgcaattggctaaagcgacactcattttgaaacgga 5463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 38132268 - 38132189
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaa 254  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| ||  ||||||||| |||||||||||||||    
T  38132268 tccaacttttctttctcacacaattttcaatgcaactttaagtatgtcttgttcctataaagtaaggttattttagtaaa 38132189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 341
Target Start/End: Original strand, 43755113 - 43755267
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    |||||||||||||||||||  |||||||||||||||||| || |||| ||||| ||    |||||||||| |||| |   | || | || || ||| |||    
T  43755113 tctctcacacaattttcaaaacaactttaagtttgtctttttcttattaagtaagggcgatttagtaaaagtgtttttttaatt-attatttcattccat 43755211  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaata 341  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  43755212 tctgtaatctgtgtgcaattggctaaagcgacactcattttaaaacggagggaata 43755267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 10842930 - 10843014
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| | ||||||| || ||||| ||||||||||||| |||||||    
T  10842930 gtaaaattgctatgacatttgactactttatttcattccttaatatttgtgcaattgactaaaacgacactcattttgaaacgga 10843014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 31491771 - 31491683
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||| |||||||||||||||||||||| ||||| | ||| ||| ||||| | |||||| |||||||||||||||||||||||||    
T  31491771 gtaaaattgctatgacatttgactactttattccattcctgaatatgtttgcaatttgctaaaacgacactcattttaaaacggagaga 31491683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 35847937 - 35847853
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||||||||||||||||  |||| ||||| ||||||||| ||  ||||||||||||||||| ||||||||    
T  35847937 gtaaaattgttatgacatttgactactttattcaattccttaatatgtgtgcaattgagtaaagcgacactcatttcaaaacgga 35847853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 44108751 - 44108835
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||| ||||||||| | |||||||||| |||||||    
T  44108751 gtaaaattgttatgacatttaactactttgtttcattccttaatatgtgtgcaattggctaaagtgtcactcattttgaaacgga 44108835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 1740641 - 1740550
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaata 341  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||| || ||| || |||||||| ||||| ||||||| ||||||||||||||    
T  1740641 gtaaaattgttattacatttgagtactttattccattctttaatatgcgtgtaattggctaaaacgacattcattttgaaacggagagaata 1740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 15573763 - 15573845
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||| ||||||| |||||    
T  15573763 gtaaaattgctataacatttgactactttattccattctttaatttgtgtgcaattggctaaaacgacattcattttgaaacg 15573845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 38530844 - 38530755
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||| |  ||||||||||||||||||||||||  ||||||||| |  || |||||||||||||||||||||||||| ||||    
T  38530844 tttagtaaaattgctgcgacatttgactactttatttcatttcttaatctgtatataattggctaaagcgacactcattttaaaatggag 38530755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 335
Target Start/End: Complemental strand, 48259926 - 48259781
Alignment:
Q  190 tcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctt 289  Q
    |||||||||||||||||||||||||||||| |||| || |||||||| | ||  | |||| ||||| ||||||| |    || || || |||  |||| |    
T  48259926 tcacacaattttcaatgcaactttaagtttatctttttcttataaagcaagggcagtttaataaaagtgttatgtctaacgattatttcattctattcct 48259827  T
Q  290 taatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||    
T  48259826 taatctgtgtgcaattggctaaaacgacactcattttgaaacggag 48259781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 49426420 - 49426336
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| ||| |||||||||||||| ||| ||||| ||||| ||||||||| || ||||||||||||||||||| |||||||    
T  49426420 gtaaaattgatatcacatttgactacttcattccattccttaatatgtgtgcaattgcctaaagcgacactcattttgaaacgga 49426336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 25151960 - 25152042
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||||||||||| ||| ||||| |||||| ||||| |||||    
T  25151960 gtaaaattactatgacatttgactactttattctattctttaatctgtgtgcaattggttaaagtgacacttattttgaaacg 25152042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 40719024 - 40719248
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||||||| |||||||||||||       |||||||| ||| | ||||||||||||||||||||  | ||| |||||||| ||||| |    
T  40719024 tgaatgtcaatttacatttttaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttt--tttcttacacaattctcaatac 40719121  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||| ||| |||| ||  ||||||  |  |  | |||||||||| ||| ||| |   ||| || || ||||||||| ||||  ||||||||| |||    
T  40719122 aactttaaatttatctttttcatataaaacaatggcagtttagtaaaaatgtgatgtctaatgattatttcatttcattccttaacttgtgtgcaattgg 40719221  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
    ||||| |||||||||||| ||||||||    
T  40719222 ctaaaacgacactcatttcaaaacgga 40719248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 52403485 - 52403613
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||| |||||||||||||||||||        ||||||| ||| ||||||||||||||| |||||  |||||||||| |||||||| |||    
T  52403485 tgaatgtcactttaaattttcaatacaactttaagttttctattccaactttaccctcaataaatactcaaactt--ctctctcacataattttcagtgc 52403582  T
Q  208 aactttaagtttgtcttatttttataaagta 238  Q
    |||||||| |||||||| |  ||||||||||    
T  52403583 aactttaattttgtcttttccttataaagta 52403613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 9915594 - 9915679
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||  | | |||||| ||||||||||||| ||||||||    
T  9915594 gtaaaattgctatgacatttgactactttattacattccttaatatgtgtgttattagctaaaacgacactcattttgaaacggag 9915679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 334
Target Start/End: Original strand, 30006205 - 30006363
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    ||||||||||||||||  | |||||||||||||||||||||| ||| |||| || |||||||||| |   | |||||||| | ||||||| |   ||| |    
T  30006205 ctccaacttttctctc--aaacaattttcaatgcaactttaaatttatctttttcttataaagtaagagcaatttagtaatagtgttatgtctaatgatt 30006302  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    | || |||  |||| ||||||||||||||| || ||||||||||| ||||||| |||||||    
T  30006303 atttcattcaattcattaatctgtgtgcaattgactaaagcgacattcattttgaaacgga 30006363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 48009160 - 48009245
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||  ||||| ||||||||| |||||||||||| ||||| ||||||||| || ||||| ||||||||||||| ||||||||    
T  48009160 gtaaaattactatgatatttgactattttatttcattccttaatatgtgtgcaattgactaaaacgacactcattttgaaacggag 48009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 45377293 - 45377179
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| |||||||||||||        || ||||| ||| |||||||| ||||||||||||||||||| ||||  ||||||||||     
T  45377293 tgaatgtcactttacatttccaatacaactttactttttttctcccaactttaccctcaatagatactccaacttttctctcgcaca--attttcaatga 45377196  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||||||||||||    
T  45377195 aactttaagtttgtctt 45377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 334
Target Start/End: Complemental strand, 45749554 - 45749418
Alignment:
Q  198 ttttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgt 297  Q
    ||||||||| || |||||||||||||| || |||||||||| ||    |||||||||| ||||||| |   ||| || |||||| |||| | |||| |||    
T  45749554 ttttcaatgtaaatttaagtttgtctttttcttataaagtaagggcggtttagtaaaagtgttatgtctaatgattattttattccattatgtaatatgt 45749455  T
Q  298 gtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||| | | ||||||||||||||||||||||||||    
T  45749454 gtgcaattagttaaagcgacactcattttaaaacgga 45749418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 335
Target Start/End: Complemental strand, 48320067 - 48319923
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    ||||||||||||||| | |||||||||||||||||||||  |||||||||||| ||  | |||||||||| | ||||| |   |||    || ||| |||    
T  48320067 tctctcacacaattt-cgatgcaactttaagtttgtctttcttttataaagtaagggcaatttagtaaaagtcttatgtctaatga----ttcattccat 48319973  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |  ||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  48319972 ttcttaatatgtgtgcaattggctaaagcgacactcattttgaaacggag 48319923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 15698894 - 15698765
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||| |||| ||||||||||||||       |||||||| |||  |||||||||||||| ||||||||||||  ||| ||||||||||      
T  15698894 tgaatgtcactttatatttccaatacaactttaattttcttcttccaactttactctcaataaatactcaaacttttctctc--acataattttcaatag 15698797  T
Q  208 aactttaagtttgtcttatttttataaagtac 239  Q
    |||||||||||| |||| || |||||||||||    
T  15698796 aactttaagtttatctttttcttataaagtac 15698765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 1428920 - 1429003
Alignment:
Q  153 caacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||| ||| ||||||||||||||| ||||||||||  ||||||||||| |||| |||||||||||||||| | || ||||||||||    
T  1428920 caactttaccctcaataaatactcaaacttttctc--tcacacaatttccaattcaactttaagtttgtccttttcttataaagta 1429003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 15823184 - 15823266
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||| |||||||||| |||| |||||| ||||  ||||| ||||||||| |||||||| ||| |||||||||||||||    
T  15823184 gtaaaattgctatgacatttaactattttattccatttcttaatatgtgtgcaattggctaaaacgatactcattttaaaacg 15823266  T

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Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 43358215 - 43358133
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||| | ||| ||| || ||||| ||||| |||||||||||||    
T  43358215 gtaaaattgctatgacatttgactattttatttcattccttaatatatgtacaattgactaaaacgacattcattttaaaacg 43358133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 6377293 - 6377204
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||| ||||||| |   ||| || || ||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||    
T  6377293 tttagtaaaagtgttatgtctaatgattatttcatttcattccttaatttatgtgcaattggctaaagcgacactcattttaaaacggag 6377204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 24611524 - 24611483
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24611524 tttagtaaaattgttatgacatttgactactttatttcattc 24611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 50158450 - 50158345
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||||||||||||||||||        |||||||| |||||||||| |||| ||||||||||||  |||||||||||||| ||||    
T  50158450 tgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaacctcaaaaaattctccaacttttc--tctcacacaatttt-aatg 50158354  T
Q  207 caactttaa 215  Q
    |||||||||    
T  50158353 caactttaa 50158345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 52125137 - 52125053
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| || ||||||||||||||||||| ||||  ||| | ||| | ||| |||||||| |||||||||||||||||||||    
T  52125137 gtaaaattgctacgacatttgactactttattacatttcttattatgtatacaattggctaaaacgacactcattttaaaacgga 52125053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 330
Target Start/End: Complemental strand, 40717370 - 40717283
Alignment:
Q  243 tattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    |||||| ||||||||| ||||| |||||||||||||||| |||||  |||| ||||||||| ||  |||| ||||||| |||||||||    
T  40717370 tattttggtaaaattgctatgatatttgactactttattccattccgtaatatgtgtgcaattgattaaaacgacacttattttaaaa 40717283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 12851907 - 12851965
Alignment:
Q  276 tttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||| ||||||| |||| || |||||||||||||||| |||||||||||||    
T  12851907 tttatttcattccttaatctttgtgtaattggctaaagcgacacttattttaaaacgga 12851965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 43929735 - 43929821
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||||||| ||| ||||||||||||||||| ||||||||||  ||| ||||||| || |||||||||||| ||||| || ||||||||||    
T  43929735 cttccaactttaccctcaataaatactcca-cttttctctc--acataattttcgatacaactttaagttagtctttttcttataaagta 43929821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 326
Target Start/End: Original strand, 6332234 - 6332392
Alignment:
Q  166 aataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgac 265  Q
    ||||||||||||||||||| ||||  ||||||||||||||| ||||||| ||||||||| ||  ||||||  |  |  | |||||||||| ||||||| |    
T  6332234 aataaatactccaacttttttctc--acacaattttcaatgtaactttatgtttgtctttttcatataaaacaaaggcagtttagtaaaagtgttatgtc 6332331  T
Q  266 atttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
       ||| || || |||  |||  ||||| ||||||||| ||| ||||||||||||||||||    
T  6332332 taatgattatttcattcaatttcttaatttgtgtgcaattggttaaagcgacactcatttt 6332392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 43105669 - 43105592
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||| ||||||||||||||| |||||||||||||| || ||||||| ||  | || |||||||||| |||||||    
T  43105669 tctctcacgcaattttcaatgcaattttaagtttgtctttttcttataaaataatggtaatttagtaaaagtgttatg 43105592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 48025239 - 48025170
Alignment:
Q  266 atttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||| |||||  |||| ||||||||| ||| |||||||||||  ||||||||||||||    
T  48025239 atttgactactttattccattccataatgtgtgtgcaattggttaaagcgacacctattttaaaacggag 48025170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 1430604 - 1430552
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||| |||||||||| ||||||||||||||||||||||| || ||||||||||    
T  1430604 tctcacacacaatttccaatgcaactttaagtttgtctttttcttataaagta 1430552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 10691020 - 10690984
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||||||||||||||||||||||||||||||||||||    
T  10691020 tctcacacaattttcaatgcaactttaagtttgtctt 10690984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 335
Target Start/End: Complemental strand, 13408311 - 13408252
Alignment:
Q  276 tttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||| |||  ||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  13408311 tttatttaatttcttaatttgtgtgcaattggctaaaacgacactcattttaaaacggag 13408252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 329
Target Start/End: Original strand, 50094380 - 50094459
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaa 329  Q
    ||||||||  ||| |||||| |||||||||||  |||| ||||| || |||||| ||| |||||||||||||||||||||    
T  50094380 gtaaaattactattacatttaactactttattcaattccttaatatgcgtgcaattggttaaagcgacactcattttaaa 50094459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 4471383 - 4471325
Alignment:
Q  277 ttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||  ||||||||| ||||| || ||||||||||||||||||| ||||||||    
T  4471383 ttatttcatttcttaatctgtatgcaattgactaaagcgacactcattttgaaacggag 4471325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 43759483 - 43759532
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtg 300  Q
    |||||||| ||| |||||||||||||||||||||||| ||||| ||||||    
T  43759483 taaaattgctattacatttgactactttatttcattccttaatttgtgtg 43759532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 46046123 - 46046208
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| || ||| |||||||||||||||  |||| ||||| | ||||||| |||||||| ||||| ||||| | ||||||||    
T  46046123 gtaaaattgctacgacgtttgactactttattgtattccttaatatatgtgcaattggctaaaacgacattcattctgaaacggag 46046208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 33087506 - 33087562
Alignment:
Q  279 atttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||| ||| |||||||||||||||  | |||| |||||||||||||||||||||||    
T  33087506 atttcgttccttaatctgtgtgcaatcgactaacgcgacactcattttaaaacggag 33087562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 7214040 - 7213997
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaat 293  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||    
T  7214040 gtaaaattgctatgatatttgactactttatttcattccttaat 7213997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 17805813 - 17805766
Alignment:
Q  284 attctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    |||| |||||||| |||||| |||||||||||||||||||||| ||||    
T  17805813 attccttaatctgcgtgcaattggctaaagcgacactcattttgaaac 17805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 14373576 - 14373610
Alignment:
Q  307 gctaaagcgacactcattttaaaacggagagaata 341  Q
    ||||||||||||||||||||||||||||| |||||    
T  14373576 gctaaagcgacactcattttaaaacggagggaata 14373610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 30686823 - 30686865
Alignment:
Q  289 ttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||||||||||| | |||||| ||||||||||||||||||    
T  30686823 ttaatctgtgtgcaattagctaaaacgacactcattttaaaac 30686865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Original strand, 38646135 - 38646165
Alignment:
Q  307 gctaaagcgacactcattttaaaacggagag 337  Q
    |||||||||||||||||||||||||||||||    
T  38646135 gctaaagcgacactcattttaaaacggagag 38646165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 340
Target Start/End: Complemental strand, 46286819 - 46286729
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaat 340  Q
    |||||| || ||||||||||| ||||||||||  |||  ||||| ||||||||| ||  |||| ||||||||||||| ||| |||| ||||    
T  46286819 gtaaaagtgctatgacatttgtctactttattctatttcttaatatgtgtgcaattgattaaaacgacactcattttgaaaaggagggaat 46286729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 11066199 - 11066256
Alignment:
Q  277 ttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||| ||||| || |||||| ||  ||||| ||||||||||||||||||||    
T  11066199 ttatttcattccttaatatgcgtgcaattgattaaagtgacactcattttaaaacgga 11066256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 34110692 - 34110761
Alignment:
Q  265 catttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||||||| ||||| ||| || || |||||||| ||   |||||||| |||||||    
T  34110692 catttgactactttatttcattcattaatttgtatgtaattggctaaaacgtttctcattttgaaacgga 34110761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 12851750 - 12851864
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||| ||||||||       || ||||| ||| |||||||| |||||| ||||||||  ||  | |||||||| |||||    
T  12851750 tgaatgtcactttacatttccaatagaactttaatttttttctcccaactttaccctcaatatatactcaaacttttcattc--atacaatttttaatgc 12851847  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||| ||||||||    
T  12851848 aactttaattttgtctt 12851864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 15647043 - 15646995
Alignment:
Q  283 cattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||| ||||| ||||||||| || ||||| ||||||||||||||||||    
T  15647043 cattccttaatttgtgtgcaattgactaaaacgacactcattttaaaac 15646995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 335
Target Start/End: Original strand, 17919985 - 17920013
Alignment:
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||    
T  17919985 gctaaagcgacactcattttaaaacggag 17920013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 31798740 - 31798776
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcatt 286  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  31798740 gtaaaattgctatgacatttgactacttaatttcatt 31798776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 335
Target Start/End: Complemental strand, 44024533 - 44024505
Alignment:
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||    
T  44024533 gctaaagcgacactcattttaaaacggag 44024505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 108 - 341
Target Start/End: Complemental strand, 776028 - 775796
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| |||||||||||||| |||||||||       |||| ||| ||| ||||||||||||||| |||||||| ||| |||||||||||||||||    
T  776028 tgaatgtcgctttacattttcaatgcaactttaatttttt-cttctaactttaccctcaataaatactctaacttttccctcccacacaattttcaatgc 775930  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||| |||    
T  775929 aactttaagtttgtctttttcttataaattaaggttattttagtaaaattgttatgacatttgactactttattctattccttaatctgtatgcaattgg 775830  T
Q  308 ctaaagcgacactcattttaaaacggagagaata 341  Q
    ||||||||||| ||||||||||| ||||||||||    
T  775829 ctaaagcgacattcattttaaaagggagagaata 775796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 149 - 335
Target Start/End: Original strand, 25332620 - 25332806
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||| || |||||||||| |||||||||    
T  25332620 cttccaactttatcctcaataaatactccaacttttctctctcatacaattttcaatacaactctaagtttgtctttttcttataaagtaaggttatttt 25332719  T
Q  249 agtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||| ||||||||||||||||||||||  |||| ||||||||||||||| | |||||||||||||||||||||||||||||    
T  25332720 agtaaaattgctatgacatttgactactttattcaattccttaatctgtgtgcaattagctaaagcgacactcattttaaaacggag 25332806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 43388800 - 43388575
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| |||||||||||||| |||||||||       |||||||| ||| ||||||||||||||| ||||||||||||  ||| |||||||||| |    
T  43388800 tgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctc--acataattttcaatac 43388703  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||| |||    
T  43388702 aactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattgg 43388603  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||| ||||||||    
T  43388602 ctaaagcgacactcattttgaaacggag 43388575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 108 - 332
Target Start/End: Original strand, 33093377 - 33093600
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  33093377 tgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatattccaacttttctccctcacacaattttcaatgc 33093476  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||| ||||  | |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||  |||||| |||| ||| |||    
T  33093477 aactttaagtttatcttgatgttataaagtaaggtta-tttagtaaaattgttatgacatttaactactttatttcatttcttaatccgtgtacaattgg 33093575  T
Q  308 ctaaagcgacactcattttaaaacg 332  Q
    ||||||||| |||||||| ||||||    
T  33093576 ctaaagcgatactcatttgaaaacg 33093600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 118 - 338
Target Start/End: Complemental strand, 4566256 - 4566036
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||| |||||||||||||        || |||| ||| | |||||||| | ||||||||||||||||||||||||||||||||||||||||| |    
T  4566256 tttacatttttaatacaactttaatttttttttttcaactttatcatcaataaagagtccaacttttctctctcacacaattttcaatgcaactttaaat 4566157  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    || |||| || ||||||| || ||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||| || || ||||||||||    
T  4566156 ttatctttttcttataaaataaggttattttagtaaaattgttatgatatttgactattttattacattttttaatctgtgtgtaattgactaaagcgac 4566057  T
Q  318 actcattttaaaacggagaga 338  Q
    |||||||||||||||||||||    
T  4566056 actcattttaaaacggagaga 4566036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 108 - 338
Target Start/End: Original strand, 2459782 - 2460012
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||| |||| |||||||||       |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2459782 tgaatgtcgctttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatgc 2459881  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||| |||| ||||||| || |||| |||||||||||||| ||||| ||||||||||||||||  |||| ||||||  |||  |  |||    
T  2459882 aactttaagtttgtcctattcttataaaataaggttgttttagtaaaattgctatgatatttgactactttattctattccttaatccatgtatatttgg 2459981  T
Q  308 ctaaagcgacactcattttaaaacggagaga 338  Q
     ||||  ||||||||||||||||||||||||    
T  2459982 ttaaaatgacactcattttaaaacggagaga 2460012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 175 - 332
Target Start/End: Original strand, 14698064 - 14698221
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| || || |||||||||| ||||||||||||||||||| |||||||||||||||    
T  14698064 tccaacttttctctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgacta 14698163  T
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    |||||||  |||  ||||||||||||||| |||||||||||||||||||||| |||||    
T  14698164 ctttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacg 14698221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 108 - 327
Target Start/End: Complemental strand, 39866816 - 39866596
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||| |||| ||| |||||       |||||||| ||| | ||||||||||||| || |||| |||||||||||||||||||| |    
T  39866816 tgaatgtcgctttacatttccaatgcaaatttaatttttttcttccaactttaccttcaataaatactcaaatttttttctctcacacaattttcaatac 39866717  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgc-aagtg 306  Q
    ||||||||||||||| | || || ||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||| || ||    
T  39866716 aactttaagtttgtcattttcttgtaaagtaaggttattttagtaaaattgctatgacatttgactactttattccattccttaatctgtgtgcaaattg 39866617  T
Q  307 gctaaagcgacactcatttta 327  Q
    | |||| ||||||||||||||    
T  39866616 gttaaaacgacactcatttta 39866596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 118 - 332
Target Start/End: Complemental strand, 10580991 - 10580777
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||| |||||||||||||||||||       |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||     
T  10580991 tttatattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcacacaattttcaatacaactttaaga 10580892  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| || |||||||||| | |||||||| ||||||||  |||| ||||||||| |||||| ||||| || ||| |||||||| ||||| || |||     
T  10580891 ttgtcttgttcttataaagtaagattattttaataaaattgcgatgatatttgactattttattccattccttgatccgtgtgcaattggcttaaacgat 10580792  T
Q  318 actcattttaaaacg 332  Q
    ||||||||| |||||    
T  10580791 actcattttgaaacg 10580777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 118 - 274
Target Start/End: Original strand, 41984437 - 41984594
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaag- 216  Q
    ||||||||||||||||||||||||       |||||||| ||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  41984437 tttacattttcaatacaactttaatttttttcttccaactttacctttaataaatactccaacttttctctcacacacaattttcaatgcaactttaagt 41984536  T
Q  217 tttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||    
T  41984537 tttgtcttattcttataaagtaaggttattttagtaaaattgctatgacatttgacta 41984594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 7743410 - 7743634
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| |||||||||||| |||||||||||||  ||||||||||||||||||    
T  7743410 tgaatgtcactttacatttccaatacaactttaatctttttcttccaactttaccctcaataaatagtccaacttttctc--tcacacaattttcaatgc 7743507  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||| |||||||| || |||||||||| ||  |  ||||||||| ||||||  |   ||| || || |||| ||||||||||||||||| || |||    
T  7743508 aactttaaatttgtctttttcttataaagtaagggcaacttagtaaaagtgttatatctgatgattatttcatttaattctttaatctgtgtgaaattgg 7743607  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||| |||||||    
T  7743608 ctaaagcgacactcattttgaaacgga 7743634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 334
Target Start/End: Original strand, 34225835 - 34225983
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||| ||  | |||||||||||| ||||| |   ||| || || |||||||    
T  34225835 tctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaattattatgtctaatgattatttcatttcat 34225934  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    || ||||||| ||||||| |||||||||||||||||||||| |||||||    
T  34225935 tccttaatctatgtgcaattggctaaagcgacactcattttgaaacgga 34225983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 16807519 - 16807435
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  16807519 taaaattgttatgacatttgactactttattccattcattaatatgtgtgcaattggctaaagcgacactcattttaaaacggag 16807435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 16846800 - 16846716
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  16846800 taaaattgttatgacatttgactactttattccattcattaatatgtgtgcaattggctaaagcgacactcattttaaaacggag 16846716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 335
Target Start/End: Complemental strand, 36360502 - 36360293
Alignment:
Q  122 cattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 221  Q
    ||||||||||||||||||||       ||| |||| ||| |||||||| |||||| ||||||||||    |||||||||||||| ||||||||||||| |    
T  36360502 cattttcaatacaactttaatttttttctttcaactttaccctcaatatatactcaaacttttctc----acacaattttcaatacaactttaagtttat 36360407  T
Q  222 cttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactc 321  Q
    ||| || ||||||| || ||  | |||||||||| ||||||| |   ||| || || ||||||||||||||| || |||||| || ||||||||||||||    
T  36360406 ctttttcttataaaataagggcagtttagtaaaagtgttatgtctaatgattatttcatttcattctttaatttgcgtgcaattgactaaagcgacactc 36360307  T
Q  322 attttaaaacggag 335  Q
    ||||||||| ||||    
T  36360306 attttaaaatggag 36360293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 344
Target Start/End: Original strand, 12342243 - 12342337
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaataaaa 344  Q
    |||||||||||||||||||||||||||||||||||||| |||||   ||||||| |||||||| |||||||||||||||||||||| || |||||    
T  12342243 gtaaaattgttatgacatttgactactttatttcattccttaataaatgtgcaattggctaaaacgacactcattttaaaacggagggagtaaaa 12342337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 4133172 - 4133257
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  4133172 gtaaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggag 4133257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 40987414 - 40987200
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||||||||||||||||||       |||||||| ||| ||||         |||||||||||||||    ||||||||||||||    
T  40987414 tgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttaccctc---------tccaacttttctctc----acaattttcaatgc 40987328  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||| ||| |||| || |||||||||| ||  | |||||||||| ||||||| |   ||| || || ||||||||| ||||| |||||||||   |    
T  40987327 aactttaaatttatctttttcttataaagtaaggacaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtgtgcaatgag 40987228  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||||||||||||    
T  40987227 ctaaagcgacactcattttaaaacggag 40987200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 38926756 - 38926832
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||||||||||||||||||    
T  38926756 gtaaaattgttatgacatttgactactttatttcattcattaatatgtgtgcaattgactaaagcgacactcatttt 38926832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 42743178 - 42743261
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||| ||||    
T  42743178 gtaaaattgctatgacatttgactactttatttcattccttaatc--tgtgcaattggctaaagcgacactcattttaaaatggag 42743261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 441234 - 441149
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||||||| ||||||||    
T  441234 gtaaaattgctatgacatttgactactttattccattccttaatttgtgtgcaattggctaaaacgacactcattttgaaacggag 441149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 29396683 - 29396602
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||    
T  29396683 gtaaaattgctacgacatttgactactttatttcattccttaatctgtgtgcaattggctaaaacgacactcattttgaaac 29396602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 29808963 - 29809044
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||||| || ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||    
T  29808963 gtaaaattgctacgacatttgactactttatttcattccttaatttgtgtgcaattggctaaagcgacactcattttgaaac 29809044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 36106406 - 36106321
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||  |||||||||||||||||||||||| ||||| ||| ||||| | |||||||||||||||||||||||||||||    
T  36106406 gtaaaattgttagaacatttgactactttatttcattccttaatatgtatgcaatttgctaaagcgacactcattttaaaacggag 36106321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 25383488 - 25383404
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| ||||| |||||||||||||||| ||||| ||||| || |||||| ||||||||||||||||||||||||||||||    
T  25383488 gtaaaattgctatgatatttgactactttattccattccttaatttgcgtgcaattggctaaagcgacactcattttaaaacgga 25383404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 37106886 - 37107023
Alignment:
Q  123 attttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtc 222  Q
    |||||||||||||||||||       |||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||    
T  37106886 attttcaatacaactttaatttttttcttccaactttacccttaataaatactccaacttttctc--tcacacaattttcaatgcaactttaagtttttc 37106983  T
Q  223 ttattt--ttataaagtacggttattttagtaaaattgtt 260  Q
    || |||  |||||||||| ||  | |||||||||| ||||    
T  37106984 ttttttgcttataaagtaagggcaatttagtaaaagtgtt 37107023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 42753897 - 42753981
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||| || |||||||||||||| ||||||| |||||||    
T  42753897 gtaaaattgctatgacatttgtctactttatttcattctttaatatgtgtgtaattggctaaagcgacagtcattttgaaacgga 42753981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 108 - 255
Target Start/End: Complemental strand, 4840870 - 4840725
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| ||||||||||||||| |||||||||| |  ||||| ||||||||||    
T  4840870 tgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctccc--acacagttttcaatgc 4840773  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    |||||||| |||||||| || |||||||||| ||  | ||||||||||    
T  4840772 aactttaattttgtctttttcttataaagtaagggcagtttagtaaaa 4840725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 343
Target Start/End: Original strand, 18717226 - 18717319
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaataaa 343  Q
    |||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||| | |||||| |||||||| |||| ||||||||||| ||||    
T  18717226 gtaaaattgttatggcatttgactacattatttcattcattagtctgtgtgcaattagctaaaacgacactctttttgaaacggagagagtaaa 18717319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 32228014 - 32227929
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||  || ||||| ||||||||    
T  32228014 gtaaaattgttatgacatttgaatactttatttcattccttaatttgtgtgcaattggctaaagcgatgcttattttgaaacggag 32227929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 8774202 - 8774286
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||| ||||||||| || ||||| | |||||||||||||||||||    
T  8774202 gtaaaattgttatgacatttgactattttattacattccttaatatgtgtgcaattgactaaaacaacactcattttaaaacgga 8774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 8789433 - 8789349
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| || ||||| | ||||||||||| |||||||    
T  8789433 gtaaaattgttatgacatttgactattttatttcattccttaatatgtgtgcaattgtctaaaacaacactcatttttaaacgga 8789349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 338
Target Start/End: Complemental strand, 14378315 - 14378163
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    |||||| || |||||||||||||||||||| ||| |||| || |||||||||| ||  | |||||||||| ||||||   |  ||| || || |||  ||    
T  14378315 tctctcgcataattttcaatgcaactttaaatttatctttttcttataaagtaagggcagtttagtaaaagtgttatattaaatgattatttcattctat 14378216  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    || |||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  14378215 tcattaaactgtgtgcaattagctaaagcgacactcattttaaaacggagaga 14378163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 334
Target Start/End: Original strand, 24775208 - 24775422
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||||||||||| |||||       || ||||  ||| |||||||||||||| |||||||||||  ||||||||||||||||  ||||||||||    
T  24775208 tttacattttcaatacaattttaatttttttctcccaagtttaccctcaataaatacttcaacttttctc--tcacacaattttcaatataactttaagt 24775305  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    |||| || || |||||||||| |   |||||||||||| ||||||  |   ||| || || |||  || | ||||| ||||||||| || ||||| ||||    
T  24775306 ttgtttttttcttataaagtaagagcattttagtaaaagtgttatatctaatgattatttcattcaataccttaatttgtgtgcaattgactaaaacgac 24775405  T
Q  318 actcattttaaaacgga 334  Q
    |||||| ||||||||||    
T  24775406 actcatcttaaaacgga 24775422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 38809841 - 38809933
Alignment:
Q  243 tattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||| ||||||||||||| |||||||| | ||| ||||||||||||||| |||||||| ||| ||||||||| ||| ||||    
T  38809841 tattttagtaaaattgctatgacatttgaccactttattcctttccttaatctgtgtgcaattggctaaaacgatactcattttgaaatggag 38809933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 43460792 - 43460927
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| ||||||||||||||       |||||||| ||| |||||||||||||| |||||||  ||||||||| |||||||||| ||||||||| |    
T  43460792 tttacatttccaatacaactttaagttttctcttccaacgttaccctcaataaatacttcaacttt--tctctcacataattttcaatacaactttaatt 43460889  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    ||||||| |  |||||||||| ||  | ||||||||||    
T  43460890 ttgtcttttccttataaagtaagggcagtttagtaaaa 43460927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 255
Target Start/End: Complemental strand, 1298923 - 1298778
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||||||  |||||||||||||       | || ||| ||| ||||||||||| ||||||||||||||||  ||| ||||||||||||    
T  1298923 tgaatgtcactttacatttctaatacaactttaatttttctcatcgaactttatcctcaataaattctccaacttttctctc--acataattttcaatgc 1298826  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaa 255  Q
    |||||||| |||||||| || |||||||||| ||  | ||||||||||    
T  1298825 aactttaattttgtctttttcttataaagtaagggcaatttagtaaaa 1298778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 12393922 - 12393837
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||| |||||||||||||||| |||||| |||||||||  || ||||||| |||| ||||||||| ||||    
T  12393922 gtaaaattgctatgacatttaactactttatttcattttttaatatgtgtgcaatcggttaaagcggcactgattttaaaatggag 12393837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 30855255 - 30855340
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||| |||||||||||| ||||||  |||| ||||| || |||||| ||| |||||||||||||||||| ||||||||    
T  30855255 gtaaaattgttaagacatttgactattttattcaattccttaatatgcgtgcaattggttaaagcgacactcattttgaaacggag 30855340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 335
Target Start/End: Original strand, 13562140 - 13562228
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||| | |||||||||||||||||| || ||||| ||||| ||||||||| || | ||| ||||||||||||||||| ||||    
T  13562140 tttagtaaaattat-atgacatttgactactttcttccattccttaatatgtgtgcaattgacaaaaacgacactcattttaaaatggag 13562228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 16316774 - 16316864
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaat 256  Q
    |||||||||| |||||||||| ||||  |||||||||||||||||||||||| |||||||| || ||||| |||| ||  | |||||||||||    
T  16316774 tcaataaatattccaacttttatctc--acacaattttcaatgcaactttaattttgtctttttcttatacagtaagggcaatttagtaaaat 16316864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 1360186 - 1360300
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||| ||||| ||||||||||||||       || ||||  ||| |||||||||||||| ||||||||||||   | ||||||||||||||    
T  1360186 tgaatgtcactttgcatttccaatacaactttaatttttttctcccaattttaccctcaataaatacttcaacttttctctt--aaacaattttcaatgc 1360283  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||||||||||||    
T  1360284 aactttaagtttgtctt 1360300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 4766288 - 4766227
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  4766288 tccaacttttc--tctcacacaattttcaatgcaactttaattttgtctttttcttataaagta 4766227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 4536583 - 4536694
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       || ||||| ||| |||||| |||||||| ||||||     |||||||||||||||||||    
T  4536583 tgaatgtcactttacatttccaatacaactttaatttttttctcccaactttaccctcaacaaatactctaacttt-----ctcacacaattttcaatgc 4536677  T
Q  208 aactttaagtttgtctt 224  Q
    |||||||| ||||||||    
T  4536678 aactttaaatttgtctt 4536694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 40410518 - 40410580
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||||||||||||||   |||||||||||||||||||||||| |||||||| || ||||||||||    
T  40410518 ctccaacttttctctg--acacaattttcaatgcaactttaattttgtctttttcttataaagta 40410580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 334
Target Start/End: Complemental strand, 4766279 - 4766136
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    |||||||||||||||||||||||||||||| |||||||| || ||||||||||  |  | |||||||| |  |||||  |   |||     |||||||||    
T  4766279 tctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttagtaataacgttatatccaatga-----ttatttcat 4766185  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |  ||||||||||| | |  ||||||||||||| |||||||||||||||    
T  4766184 ttcttaatctgtgtaccaaaggctaaagcgacattcattttaaaacgga 4766136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 337
Target Start/End: Complemental strand, 29795276 - 29795115
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgact 273  Q
    ||||||||||||| ||  ||||||||||||||||||||||||  ||||||| || ||||||| || ||  | |||||||||| | ||||| |   ||| |    
T  29795276 ctccaacttttctttc--acacaattttcaatgcaactttaaagttgtctttttcttataaaataagggcagtttagtaaaagtattatgtctaatgatt 29795179  T
Q  274 actttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagag 337  Q
    | || ||| ||||| |||||||| |||||| || ||||| |||| |||| ||| |||| |||||    
T  29795178 atttcattccattcattaatctgcgtgcaattgactaaaacgacgctcaatttgaaacagagag 29795115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 45081883 - 45081825
Alignment:
Q  276 tttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||| ||||| ||||||||| |  ||||| |||||||||||||||||||||    
T  45081883 tttatttcattccttaatatgtgtgcaattttctaaaacgacactcattttaaaacgga 45081825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 11171808 - 11171905
Alignment:
Q  166 aataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||||| ||| |||||||| || ||| |||| ||||| ||||||||||||||||| ||   |||||||  || || |||||||||| |||||||    
T  11171808 aataaatacttcaatttttctctttctcactatttccaatgtaactttaagtttgtctttttcgcataaagttaggataatttagtaaaagtgttatg 11171905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 1381816 - 1381901
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    ||||||||||||||||    |||||||||||||||| ||||||||| |||| || |||||||||| |   | |||||||||| |||||||    
T  1381816 ctccaacttttctctc----acaattttcaatgcaattttaagtttttctttttcttataaagtaagagcagtttagtaaaagtgttatg 1381901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 286
Target Start/End: Complemental strand, 6220406 - 6220371
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcatt 286  Q
    |||||||| |||||||||||||||||||||||||||    
T  6220406 taaaattgctatgacatttgactactttatttcatt 6220371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 42969977 - 42970024
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaa 235  Q
    ||||||||||||||||||||||||||||| || || | ||||||||||    
T  42969977 tctcacacaattttcaatgcaactttaaggttatcatttttttataaa 42970024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 43344325 - 43344213
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||||| ||| | | ||||||||||| || |||||||||  ||| |||||||||| |||||||||  || |||| || |||||||||| || |  |||    
T  43344325 cttccaactttacctttaataaatactctaatttttctctc--acataattttcaatacaactttaaacttatctttttcttataaagtaagggtggttt 43344228  T
Q  249 agtaaaattgttatg 263  Q
    | |||||||||||||    
T  43344227 aataaaattgttatg 43344213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 19636659 - 19636689
Alignment:
Q  251 taaaattgttatgacatttgactactttatt 281  Q
    |||||||||||||||||||||||||||||||    
T  19636659 taaaattgttatgacatttgactactttatt 19636689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 19835252 - 19835282
Alignment:
Q  251 taaaattgttatgacatttgactactttatt 281  Q
    |||||||||||||||||||||||||||||||    
T  19835252 taaaattgttatgacatttgactactttatt 19835282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 42005055 - 42005124
Alignment:
Q  265 catttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||  |||| ||||| | |||| || | |||||| ||||||| |||||||||||||    
T  42005055 catttgactactttattcaattccttaatatatgtgaaattagctaaaacgacacttattttaaaacgga 42005124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 44228648 - 44228701
Alignment:
Q  283 cattctttaatctgtgtgcaagt-ggctaaagcgacactcattttaaaacggag 335  Q
    |||| ||||||| |||||||| | ||||||||||||| ||||||||||||||||    
T  44228648 cattttttaatccgtgtgcaaattggctaaagcgacattcattttaaaacggag 44228701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 45148044 - 45147991
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgt-cttatttttataaagta 238  Q
    |||||||||||||||| |||||||||||||| ||||  || |||||||||||||    
T  45148044 tctctcacacaatttttaatgcaactttaagattgtatttttttttataaagta 45147991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 34546150 - 34546114
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattc 287  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  34546150 taaaattattatgacatttgactactttattccattc 34546114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 335
Target Start/End: Complemental strand, 37724235 - 37724207
Alignment:
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||||||||||||||||||||    
T  37724235 gctaaagcgacactcattttaaaacggag 37724207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 70598 - 70372
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||||||||||| |||||||||       |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  70598 tgaatgtcactttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatac 70499  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||||||||| || || |||||||||| |||||||||||||||||||| |||||||||||||||||||||  |||  ||||||||| ||||| |||    
T  70498 aactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgtcatgacatttgactactttattcaatttcttaatctgtatgcaattgg 70399  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
     || |||||||||||||||||||||||    
T  70398 ttatagcgacactcattttaaaacgga 70372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 108 - 332
Target Start/End: Complemental strand, 34461728 - 34461503
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||| ||||||||||||||        |||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  34461728 tgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaaaactccaacttttctgtctcacacaattttcaatg 34461629  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    |||||||||||||||||| ||  | ||||||| | ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||    
T  34461628 caactttaagtttgtcttgttcatgtaaagtaagattattttagtaaaattgttatgacatttgactattttatttcattccttaatctgtgtacaattg 34461529  T
Q  307 gctaaagcgacactcattttaaaacg 332  Q
    |||||||||||||||||||| |||||    
T  34461528 gctaaagcgacactcattttgaaacg 34461503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 175 - 332
Target Start/End: Original strand, 8471333 - 8471490
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgacta 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||||    
T  8471333 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattggtatgacatttgacta 8471432  T
Q  275 ctttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||||||  ||||||| ||||||| |||||||||||||||||||||| |||||    
T  8471433 ctttatttcatttcttaatctatgtgcaattggctaaagcgacactcattttgaaacg 8471490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 108 - 330
Target Start/End: Complemental strand, 14541889 - 14541669
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||||||  |||||||||||||       |||||||| ||| ||| |||||||||| ||||||||||||||||||  |||||||||||    
T  14541889 tgaatgtcactttacatttctaatacaactttaatttttttcttccaactttatccttaataaatacttcaacttttctctctcaca--attttcaatgc 14541792  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| |||    
T  14541791 aactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattccattatttaatctgtatgcaattgg 14541692  T
Q  308 ctaaagcgacactcattttaaaa 330  Q
    |||||  || |||||||||||||    
T  14541691 ctaaaatgatactcattttaaaa 14541669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 108 - 330
Target Start/End: Complemental strand, 18673243 - 18673022
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| |||||||||||||| | |||||||       |||||||| ||| | | |||||||||||||||||||||||||||||||||||||||| |    
T  18673243 tgaatgtcgctttacattttcaatgcgactttaatttttttcttccaactttacctttaataaatactccaacttttctctctcacacaattttcaatac 18673144  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    || ||||||||||| || || | |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| || |||    
T  18673143 aattttaagtttgtatttttctgataa-gtaaggttattttagtaaaattgttatgacatttgactactttatttcatttcttaatttgtgtgtaattgg 18673045  T
Q  308 ctaaagcgacactcattttaaaa 330  Q
    ||| |||||||||||||||||||    
T  18673044 ctagagcgacactcattttaaaa 18673022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 34168349 - 34168130
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| |||||| ||||||||         ||||||||||||||||||||||    
T  34168349 tgaatgtcactttacattttcaatacaactttaacttttttcttccaactttaccctcaagaaatactct--------tctctcacacaattttcaatgc 34168258  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||||||||||||||||||  |||| |||||| ||||| || |||    
T  34168257 aactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgctatgacatttgactactttattcaattccttaatccgtgtgtaattgg 34168158  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||||||| ||||||||    
T  34168157 ctaaagcgacactcattttgaaacggag 34168130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 334
Target Start/End: Original strand, 27416551 - 27416736
Alignment:
Q  151 tccaacattaacctcaataaatactccaacttttctctctcaca--caattttcaatgcaactttaagtttgtcttatttttataaagtacggttatttt 248  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||  ||||||||||||||| | |||||||||||| || |||||||||| |||||||||    
T  27416551 tccaactttaccctcaataaatactccaacttttttctctcacacacaattttcaatgcaattctaagtttgtctttttcttataaagtaaggttatttt 27416650  T
Q  249 agtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||| ||||||||||||||||||||||  |||| |||||||| |||||| || || ||||||||||||||| ||||||||    
T  27416651 agtaaaattgctatgacatttgactactttattatattccttaatctgcgtgcaattgactgaagcgacactcatttaaaaacgga 27416736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 310
Target Start/End: Original strand, 13108997 - 13109198
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| ||||||||||||||| |||||||||       ||||||||  || ||| |||||||||||||||||||||||||||||||||||| |||||    
T  13108997 tgaatgtcattttacattttcaatgcaactttaatttttt-cttccaactctatccttaataaatactccaacttttctctctcacacaatttttaatgc 13109095  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    || ||||| |||||||| || ||||||| || ||||||||||||||||||  |||||||||||| || |||||||||||| ||||| ||||||||| |||    
T  13109096 aaatttaaatttgtctttttcttataaaataaggttattttagtaaaattactatgacatttgaatattttatttcattccttaatttgtgtgcaattgg 13109195  T
Q  308 cta 310  Q
    |||    
T  13109196 cta 13109198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 9022404 - 9022630
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||| ||| ||||||||||||||       |||||||| ||| ||||||||||||||||||||||  | ||||||||||||||||||||    
T  9022404 tgaatgtcactttacgtttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttt--tttctcacacaattttcaatgc 9022501  T
Q  208 aac-tttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    ||| |||||||||||||| ||  ||||||  | |   | |||||||||| ||||||| |   ||| || || ||| |||| |||||||||||||||| ||    
T  9022502 aacttttaagtttgtctttttcatataaaacaagtgcagtttagtaaaagtgttatgtctaatgattaattcattccattttttaatctgtgtgcaattg 9022601  T
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
    |||||| ||||||||||||||||||||||    
T  9022602 gctaaaacgacactcattttaaaacggag 9022630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 4760562 - 4760478
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  4760562 gtaaaattgctatgacatttgactactttatttcattccttaatctatgtgcaattggctaaagcgacactcattttaaaacgga 4760478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 32271575 - 32271738
Alignment:
Q  166 aataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttattt-ttataaagtacggttattttagtaaaattgttatga 264  Q
    |||||||||| |||||||| ||||||||| |||||||||||||| ||||||||| | || ||| |||| ||||| | ||||||||||||||||| ||| |    
T  32271575 aataaatacttcaacttttatctctcacataattttcaatgcaattttaagttttttttctttcttatcaagtaagattattttagtaaaattgctataa 32271674  T
Q  265 catttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
     ||||| | |||||||||||||| |  |||||||||||| |  ||||| |||||||||||||||||    
T  32271675 gatttgtcaactttatttcattcct--atctgtgtgcaattaactaaaacgacactcattttaaaa 32271738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 165 - 334
Target Start/End: Complemental strand, 32326811 - 32326644
Alignment:
Q  165 caataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatga 264  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||| |||||||| ||  ||||||  | ||  | |||||||||| ||||| |     
T  32326811 caataaatactccaacttttttctc--acacaattttcaatgcaactttaaatttgtctttttcatataaaacaagggcagtttagtaaaagtgttacgt 32326714  T
Q  265 catttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |   ||| || || ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||    
T  32326713 ctaatgattatttcatttcattccttaatctgtgtgcaattgactaaagcgacactcattttaaaacgga 32326644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 7612507 - 7612635
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||| ||||       |||||||| ||| ||| ||||||||||||||||||||||  ||||||||||||||||||    
T  7612507 tgaatgtcactttacattttcaatacaacattaagttttctcttccaactttaccctaaataaatactccaacttttctc--tcacacaattttcaatgc 7612604  T
Q  208 aactttaagtttgtcttatttttataaagta 238  Q
    |||||||| |||||||| || ||||||||||    
T  7612605 aactttaattttgtctttttcttataaagta 7612635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 286
Target Start/End: Original strand, 35052480 - 35052657
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||||||||||||| ||||||||||||||       ||| |||| ||  | ||||||||||||| || |||||||||||||| ||||||||||||    
T  35052480 tgaatgtcgttttacatttccaatacaactttaatttttttctttcaactttcccttcaataaatactcaaaattttctctctcacataattttcaatgc 35052579  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcatt 286  Q
    ||||||||  || |||| || ||| ||| || | |||||||| |||||||  ||||| ||| |||||||||||||||||    
T  35052580 aactttaaacttatctttttctta-aaaataagattattttaataaaattactatgatattcgactactttatttcatt 35052657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 8382621 - 8382406
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       ||  |||| ||| |||||||| |||||||||||||||||||  ||||||||||||||||    
T  8382621 tgaatgtcactttacattttcaatacaactttaatttttttctctcaactttaccctcaatatatactccaacttttctctc--acacaattttcaatgc 8382524  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||| |||||||||||| || ||         ||  | |||||||||| ||||||| |    || || |||||||||||||||||| | ||||||| | |    
T  8382523 aactataagtttgtctttttctt---------gggcagtttagtaaaagtgttatgtctaacgattattttatttcattctttaatttatgtgcaattag 8382433  T
Q  308 ctaaagcgacactcattttaaaacgga 334  Q
    ||||| |||||||||||||||||||||    
T  8382432 ctaaaacgacactcattttaaaacgga 8382406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 108 - 331
Target Start/End: Original strand, 22601145 - 22601365
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| |||| |||||||||||||| ||||||||  ||| ||||||||||||    
T  22601145 tgaatgtcactttacatttccaatacaactttaattgttt-cttccaactttaccctcgataaatactccaacctttctctc--acagaattttcaatgc 22601241  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || ||||||||||  |  | ||||||||||  |||||| |   ||| || || |||| |||| ||||| ||||| ||| |||    
T  22601242 aactttaagtttgtctttttcttataaagtaaagacaatttagtaaaagagttatgtctaatgattatttcattttattcattaatatgtgtacaattgg 22601341  T
Q  308 ctaaagcgacactcattttaaaac 331  Q
    ||||| ||||| ||||||| ||||    
T  22601342 ctaaatcgacattcattttgaaac 22601365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 189 - 335
Target Start/End: Complemental strand, 38329118 - 38328973
Alignment:
Q  189 ctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattct 288  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||| ||  | |||||||||| ||||||| |   ||| || || ||| |||||     
T  38329118 ctcacacaattttcaatgcaactttaagtttgtcttttgattataaagtaagg-cagtttagtaaaagtgttatgtctaatgattatttcattccattcc 38329020  T
Q  289 ttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||| || ||||||||| ||||||||| ||||||||    
T  38329019 ttaatctgtgtgcaattgactaaagcgaaactcattttgaaacggag 38328973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 39463407 - 39463492
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| || ||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  39463407 gtaaaattgctacgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggag 39463492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 11257551 - 11257699
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||||||| |||||||||||||       |||||||| |||| ||||||||||||| |||||||||||  ||||||||||||||||||    
T  11257551 tgaatgtcactttacatttttaatacaactttaattttt--cttccaactttaatctcaataaatacttcaacttttctc--tcacacaattttcaatgc 11257646  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgtt 260  Q
    ||||||||||||||||  || ||||||| ||  | || |||||||||| ||||    
T  11257647 aactttaagtttgtctgtttcttataaaataaaggtagtttagtaaaaatgtt 11257699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 3095637 - 3095533
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||||||||||||||||||       || ||||| ||| |||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||    
T  3095637 tttacattttcaatacaactttaattttttcctcccaactttaccctcaataaatacttcaacttttctctcgcacac--ttttcaatgcaactttaagt 3095540  T
Q  218 ttgtctt 224  Q
    |||||||    
T  3095539 ttgtctt 3095533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 27109964 - 27109836
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||| ||||| ||||||||||||||       |||||||| ||| ||||||||||||||| ||||||||||||  ||||||||| ||||||    
T  27109964 tgaatgtcactttccatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctc--acacaatttccaatgc 27109867  T
Q  208 aactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||||||| | || ||||||||||    
T  27109866 aactttaagtttgtccttttcttataaagta 27109836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 9880504 - 9880419
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||| |||||||| ||||  ||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  9880504 gtaaaattgctatgacatttgaccactttattccatttcttaatctgtgtgcaattggttaaagcgacactcattttgaaacggag 9880419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 108 - 335
Target Start/End: Original strand, 36915376 - 36915599
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||| | |||||||||| || |  |||| ||||    ||||||||||||||    
T  36915376 tgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatattcaacattttttctc----acaattttcaatgc 36915471  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| ||  ||||||  | ||  | |||||||||| | ||||| |   ||| || || ||| ||||| ||||||||| ||||| |||    
T  36915472 aactttaagtttgtctttttcatataaaacaagggcaatttagtaaaaatattatgtctaatgattatttcattccattccttaatctgtatgcaattgg 36915571  T
Q  308 ctaaagcgacactcattttaaaacggag 335  Q
     |||| ||||||||||||||||||||||    
T  36915572 ttaaaacgacactcattttaaaacggag 36915599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 31899251 - 31899175
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||| | ||||||| ||||||||||||||||||||||    
T  31899251 gtaaaattgttatgacattcgacaactttatttcattccttaatatatgtgcaattggctaaagcgacactcatttt 31899175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 32661326 - 32661428
Alignment:
Q  120 tacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagttt 219  Q
    ||||||||||||||||||||||       || ||||| ||| ||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||    
T  32661326 tacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactctaacttttctc--tcacacaattttcaatacaactttaagttt 32661423  T
Q  220 gtctt 224  Q
    |||||    
T  32661424 gtctt 32661428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 40228724 - 40228808
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||||| || |||||  |||||||||||| |||||||    
T  40228724 gtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattgactaaaatgacactcattttgaaacgga 40228808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 43084630 - 43084542
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||  |||||||||||||||||||||||||||| ||||| ||||||||| || |||||| |||||| ||||||||| |||||||    
T  43084630 gtaaaattactatgacatttgactactttatttcattccttaatatgtgtgcaattgactaaagtgacacttattttaaaatggagaga 43084542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 43448866 - 43448950
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||| || || |||||||||||| |||||| |||||||    
T  43448866 gtaaaattgatatgacatttgactactttatttcattcattaatatgtgtgtaattgactaaagcgacacccattttgaaacgga 43448950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 31693626 - 31693545
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttta 327  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||  ||||||||  |||||||||||||| ||||||||    
T  31693626 tttagtaaaattgttatgacatttgactactttattatattccttaacatgtgtgcagttggctaaagcgacattcatttta 31693545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 39698669 - 39698588
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaac 331  Q
    ||||||||| ||| |||||||||||||||||||||| | ||||| ||||||||| || |||||| |||||||||||||||||    
T  39698669 gtaaaattgctataacatttgactactttatttcataccttaatatgtgtgcaattgcctaaagagacactcattttaaaac 39698588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 11168826 - 11168918
Alignment:
Q  243 tattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||| |||||||||| ||||| |||||||||  | ||| ||||| |||||||||||| || |||||||||||||||||||||| ||||||||    
T  11168826 tatttcagtaaaattgctatgatatttgactaaatgattgcattccttaatctgtgtgaaaatggctaaagcgacactcattttgaaacggag 11168918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 335
Target Start/End: Original strand, 6839292 - 6839441
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    ||||||||| |||||||||||||| |||| ||||||||| || ||||||||||  |  | |||||||||| ||||||| |   ||| || || ||| |||    
T  6839292 tctctcacataattttcaatgcaattttatgtttgtctttttcttataaagtaaaggcaatttagtaaaagtgttatgtctaatgattatttcattccat 6839391  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    | |||||||||||| |||  || |||| ||||||||||||| ||||||||    
T  6839392 tttttaatctgtgtacaatgggttaaaacgacactcatttttaaacggag 6839441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 263
Target Start/End: Original strand, 30788954 - 30789097
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||| ||||||||||||||||       |||| ||| ||| ||| | ||||||||||||||||  ||||||||| |||||||||| ||||||||| |    
T  30788954 tttacatattcaatacaactttaatttttttcttctaactttacccttagtaaatactccaacttt--tctctcacataattttcaatacaactttaaat 30789051  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    ||||||| || |||||||||| ||  | |||| ||||| |||||||    
T  30789052 ttgtctttttcttataaagtaaggacaatttaataaaagtgttatg 30789097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 323
Target Start/End: Complemental strand, 45187361 - 45187226
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattc 287  Q
    |||| |||||||||||| ||||||||||||||||||| || |||||||  | ||  | |||||||||| ||| ||| |   ||| || || |||  ||||    
T  45187361 tctctcacaattttcaaagcaactttaagtttgtctttttcttataaaacaaggacagtttagtaaaagtgtcatgtctaatgattatttcattatattc 45187262  T
Q  288 tttaatctgtgtgcaagtggctaaagcgacactcat 323  Q
     ||||||||||||||| |||||||||||||||||||    
T  45187261 cttaatctgtgtgcaattggctaaagcgacactcat 45187226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 326
Target Start/End: Original strand, 4989630 - 4989704
Alignment:
Q  252 aaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| ||| ||||| ||| |||||||| |||||||||    
T  4989630 aaaattgctatgatatttgactactttattccattctttaatatgtatgcaattggttaaagcgaaactcatttt 4989704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 7129362 - 7129414
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  7129362 tctctcacacaatttccaatgcaactttaattttgtcttattcttataaagta 7129414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 11336100 - 11336048
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  11336100 tctctcacacaattttcaatgcaactttaattttgtctttttcttataaagta 11336048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 29025752 - 29025661
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaata 341  Q
    ||||||||| |||||||||||  |||||||||  |||| ||||| ||||||||| ||  |||| ||||||||||||| | ||||||||||||    
T  29025752 gtaaaattgctatgacatttgtgtactttattctattccttaatatgtgtgcaattgattaaaacgacactcattttgatacggagagaata 29025661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 5044329 - 5044242
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||||||| |||  ||||||||||||| |||||||||| ||  |||||||||| ||| ||||||||| ||||| || |||||||||||||    
T  5044329 cttccaactttattctcaataaatacttcaacttttctatc--acacaatttttaatacaactttaaatttgtattttttttataaagta 5044242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 7839608 - 7839692
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagag 337  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| |||||   | | | |||| ||||||||||||||||||| ||||    
T  7839608 gtaaaattgtcatgatatttgactactttatttcattccttaatgtgtgt---aattgttaaaacgacactcattttaaaacgaagag 7839692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 9304637 - 9304552
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||| |||| ||||||  |||  ||| | ||||||||| ||||||||  |||||||||||||||||||||    
T  9304637 gtaaaattgctatgacatttaactattttattcaatttcttattatgtgtgcaattggctaaaatgacactcattttaaaacggag 9304552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 17921107 - 17921192
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||||||||||||| ||||||  |||| ||||| ||||||||| ||||| |||| ||| | ||||| ||||||||    
T  17921107 gtaaaattgctatgacatttgactattttattcaattccttaatatgtgtgcaattggcttaagcaacattaattttgaaacggag 17921192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 43938186 - 43938244
Alignment:
Q  164 tcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||||||||||||||||||||||||| |||||  |||| ||||||||||||||||| ||||    
T  43938186 tcaataaatactccaacttttctctcgcacac--tttttaatgcaactttaagtttatctt 43938244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 330
Target Start/End: Original strand, 39970410 - 39970545
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    |||||| |||||||||||||||||||||||||||||||| || ||         ||  | |||||||||| || |||| |   ||| || || |||||||    
T  39970410 tctctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtggtatgtctaatgattatttcatttcat 39970500  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    |||||||| | ||||||| |||||||| |||||||||||||||||    
T  39970501 tctttaatttatgtgcaattggctaaaacgacactcattttaaaa 39970545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 44713684 - 44713736
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgca 302  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  44713684 gtaaagttgctatgacatttgactactttatttcattccttaatctatgtgca 44713736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 5588617 - 5588485
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcaca-----caattttc 202  Q
    ||||||||  ||||||||| ||||||||||||||       |||||||| ||| | ||||||||||||| |||||||||||| ||||     |||| |      
T  5588617 tgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactcaaacttttctctcacacaaatttcaatgtaa 5588518  T
Q  203 aatgcaactttaagtttgtcttatttttataaa 235  Q
    |||| ||||||||||||||||| || |||||||    
T  5588517 aatgtaactttaagtttgtctttttcttataaa 5588485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 221
Target Start/End: Original strand, 26439051 - 26439086
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgt 221  Q
    ||||||||||||||||||||||||||||||||||||    
T  26439051 tctctcacacaattttcaatgcaactttaagtttgt 26439086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 16209026 - 16209064
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  16209026 tctctcacataattttcaatgcaactttaagtttgtctt 16209064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 334
Target Start/End: Original strand, 41414920 - 41415065
Alignment:
Q  188 tctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattc 287  Q
    ||||||||||||||||||||||||||||| || |  | |||||||||| || ||  |  ||||||||| ||||| | |   ||| || || |||||||||    
T  41414920 tctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggca-gttagtaaaagtgttacgtctaatgattatttcatttcattc 41415018  T
Q  288 tttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
     ||||| | ||||||| |||||||| ||||| | |||||||||||||    
T  41415019 cttaatatatgtgcaattggctaaaacgacatttattttaaaacgga 41415065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 41790208 - 41790158
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaag 236  Q
    |||||||||||||||||||| ||||||||| |||||||| || ||||||||    
T  41790208 tctctcacacaattttcaatccaactttaaatttgtctttttcttataaag 41790158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 4530055 - 4530100
Alignment:
Q  289 ttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||    
T  4530055 ttaatctgtgtgcaattggctaaaacgacactcattttgaaacgga 4530100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 1774130 - 1774086
Alignment:
Q  194 acaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    |||||||||||||||||||||| |||||||| || ||||||||||    
T  1774130 acaattttcaatgcaactttaattttgtctttttcttataaagta 1774086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 8106862 - 8106806
Alignment:
Q  279 atttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||||||||| ||||||||| || ||||| ||| ||||||||||||| ||||    
T  8106862 atttcattctttaatttgtgtgcaattgactaaatcgatactcattttaaaatggag 8106806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 18666621 - 18666536
Alignment:
Q  175 tccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttat 262  Q
    |||||||||||  |||||||||||||| ||||||||||||   ||||||| || |||||||||| ||  | |||||||||| ||||||    
T  18666621 tccaacttttc--tctcacacaatttttaatgcaactttagtgttgtctttttcttataaagtaaggacagtttagtaaaagtgttat 18666536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 37185734 - 37185680
Alignment:
Q  168 taaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    ||||||||||||||||||||||  | |   |||||||||||||||||||||||||||    
T  37185734 taaatactccaacttttctctcgtatat--ttttcaatgcaactttaagtttgtctt 37185680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 156314 - 156350
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtc 222  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  156314 tctctcgcacaattttcaatacaactttaagtttgtc 156350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 118 - 335
Target Start/End: Complemental strand, 17345269 - 17345056
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||  |||||||||||||       |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17345269 tttacatttctaatacaactttaatatttttcttccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaacttgaagt 17345170  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| || |||||||||| ||||||||||||||||||| ||||||||| |||||||||||| ||||| |||    |||||||| |||||||||||||    
T  17345169 ttgtcttgttcttataaagtaaggttattttagtaaaattgctatgacattcgactactttattccattcctta----gtgtgcaattggctaaagcgac 17345074  T
Q  318 actcattttaaaacggag 335  Q
    ||||||||||||| ||||    
T  17345073 actcattttaaaatggag 17345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 108 - 330
Target Start/End: Original strand, 34576553 - 34576771
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||| || |||||||||| ||||||||||||||       |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  34576553 tgaatatcattttacatttccaatacaactttaatttttttcttccaactttatcctcaataaatacttcaacttttctctctcacacaattttcaatgc 34576652  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    ||||||||||||||||| || || |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    || | ||||||| |||    
T  34576653 aactttaagtttgtcttgttcttgtaaagtaaagttattttagtaaaattgttatgacatctgactactttatttcattc----atatatgtgcaattgg 34576748  T
Q  308 ctaaagcgacactcattttaaaa 330  Q
    ||||| ||||||| |||||||||    
T  34576749 ctaaaacgacacttattttaaaa 34576771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 108 - 323
Target Start/End: Original strand, 26189517 - 26189733
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||| ||||||||||| |||| |||||||||       |||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||    
T  26189517 tgaatgttgttttacatttccaatgcaactttaatatttttcttccaactttaccctcaataaatactccaatttttctctcacacacaattttcaatgc 26189616  T
Q  208 aactttaagtttgtcttattt-ttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    |||||||||||||| || ||| |||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||  ||||||||| ||    
T  26189617 aactttaagtttgttttttttcttataaagtaaggttattttagtataattgctatgacatttaactactttatttcattccttaacatgtgtgcaattg 26189716  T
Q  307 gctaaagcgacactcat 323  Q
     ||||||||||||||||    
T  26189717 tctaaagcgacactcat 26189733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 25932637 - 25932864
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||| | |||||||||||||| |||||||||        |||| ||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  25932637 tgaatgtggctttacattttcaatgcaactttaattttttttcttctaactttatcctcaataaatactcaaacttttttctctcacacaattttcaatg 25932736  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
     ||||||||||||||||| ||  ||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||  |||||| ||||| || ||    
T  25932737 taactttaagtttgtcttgttgctataaagtaaggttattttagtaaaattgctatgacatttaactactttatttcatttcttaatcggtgtgtaattg 25932836  T
Q  307 gctaaagcgacactcattttaaaacgga 334  Q
    |||||| ||||||| |||||||||||||    
T  25932837 gctaaaacgacacttattttaaaacgga 25932864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 118 - 326
Target Start/End: Complemental strand, 12828814 - 12828608
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| ||||||||||||||       |||||||| ||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||     
T  12828814 tttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctc--acacaattttcaatgcaactttaagc 12828717  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgac 317  Q
    ||||||| || |||||||||| ||  | |||||||||| ||||||| |   ||| || || ||||||||| ||||| ||||||||| |||||| | ||||    
T  12828716 ttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcatttcattcattaatttgtgtgcaattggctacaacgac 12828617  T
Q  318 actcatttt 326  Q
     ||||||||    
T  12828616 gctcatttt 12828608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 108 - 303
Target Start/End: Original strand, 6140609 - 6140803
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||| |||| |||||||||       |||||||| ||| | ||||||||||||  ||||||||||||| ||||||||||||||||    
T  6140609 tgaatgtcgctttacatttccaattcaactttaatttttt-cttccaactttaccttcaataaatacttaaacttttctctcttacacaattttcaatgc 6140707  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaa 303  Q
    || |||||   | |||| ||  |||||||||  |||||||||||||||||| ||| | ||||| ||||||||||||||| |||||||||| |||||    
T  6140708 aattttaaacatatctttttcatataaagtaaagttattttagtaaaattgctataaaatttgtctactttatttcattttttaatctgtttgcaa 6140803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 329
Target Start/End: Original strand, 6992508 - 6992631
Alignment:
Q  206 gcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagt 305  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||||  |||||  |||||||| |||||||||||  ||||||||||||||| |    
T  6992508 gcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattactatgatgtttgactattttatttcatttcttaatctgtgtgcaatt 6992607  T
Q  306 ggctaaagcgacactcattttaaa 329  Q
    | |||||||  |||||||||||||    
T  6992608 gactaaagcaccactcattttaaa 6992631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 108 - 303
Target Start/End: Original strand, 6143093 - 6143288
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    |||||||| |||||||||| |||| |||||||||       |||||||| ||| | ||||||||||||  ||||||| ||||| |||||||||| |||||    
T  6143093 tgaatgtcattttacatttccaattcaactttaatttttttcttccaactttaccttcaataaatacttaaacttttttctcttacacaatttttaatgc 6143192  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaa 303  Q
    || |||||   | |||| ||  |||||||||  |||||||||||||||||| ||| | ||||| ||||||||||||||| |||||||||| |||||    
T  6143193 aattttaaacatatctttttcatataaagtaaagttattttagtaaaattgctataaaatttgtctactttatttcattttttaatctgtttgcaa 6143288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 10520393 - 10520308
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||||| |||||||    
T  10520393 gtaaaattgctatgacatttgactactttatttcattccttaatatgtgtacaattggttaaagcgacactcattttacaacggag 10520308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 1135075 - 1135163
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||| ||||| ||||| |||||||||||    
T  1135075 gtaaaattgatatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcaacacttattttgaaacggagaga 1135163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 29927216 - 29927370
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||| ||||||||||||||        |||||||| ||| ||||||||||||||||||||||||||||  |   | |||||||||    
T  29927216 tgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctc--atgtagttttcaatg 29927313  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    |||||||||||||||||| || |||||||||| || ||| ||||||||| |||||||    
T  29927314 caactttaagtttgtctttttcttataaagtaaggatatgttagtaaaagtgttatg 29927370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 335
Target Start/End: Complemental strand, 31275785 - 31275559
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||| ||||||||||||||        |||||||| ||| ||||||||||||||||||||||| ||||  |||||||||||||||    
T  31275785 tgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctc--acacaattttcaatg 31275688  T
Q  207 caactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtg 306  Q
    |||||||||||||||||| ||  ||||||  | ||  | ||| |||||| ||||| | |   ||  || || ||||| ||| ||||||||||||||| ||    
T  31275687 caactttaagtttgtctttttcatataaaacaagggcagtttggtaaaagtgttacgtctaatggttatttcatttctttccttaatctgtgtgcaattg 31275588  T
Q  307 gctaaagcgacactcattttaaaacggag 335  Q
    |||||| | ||||| ||||| ||||||||    
T  31275587 gctaaaacaacacttattttgaaacggag 31275559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 29915550 - 29915679
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn-cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||| ||||||||||||||        |||||||| ||| ||||||||||||||||||||||||||  ||||||||||| |||||    
T  29915550 tgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctc--tcacacaatttccaatg 29915647  T
Q  207 caactttaagtttgtcttatttttataaagta 238  Q
    |||||||| ||||||||| || ||||||||||    
T  29915648 caactttatgtttgtctttttcttataaagta 29915679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 23259328 - 23259243
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||||||||| | |||||||||| | |||||| |||||||||    
T  23259328 gtaaaattgttacgacatttgactactttatttcatttcttaatctgtgtgcaattagctaaagcgaaattcatttcaaaacggag 23259243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 32258731 - 32258838
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaa-tactccaacttttctctctcacacaattttcaatg 206  Q
    ||||||||  ||||||||||||||||||||||||       |||||||| ||||||| || ||| ||||||||||||| |||||||||||||||||||||    
T  32258731 tgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaacctaaaaaaaatactccaactttt-tctctcacacaattttcaatg 32258829  T
Q  207 caactttaa 215  Q
    |||||||||    
T  32258830 caactttaa 32258838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 19675128 - 19675210
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||| ||||||||||||||||||||||  |||| ||||| ||||| ||| ||| ||||||||||||||||||||||||    
T  19675128 gtaaaattgctatgacatttgactactttattcaattccttaatatgtgttcaattggttaaagcgacactcattttaaaacg 19675210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 341
Target Start/End: Complemental strand, 26669241 - 26669010
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||| |||| ||||||||||||||       | |||||| ||| ||||||||||  ||||||||||||||||  ||| ||||||||||||    
T  26669241 tgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctc--acataattttcaatgc 26669144  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||| |||||||| || |||||||||| ||  | ||||||||||  |||||  |   | | || || |||  |||  ||||||| ||||| |  |     
T  26669143 aactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatctttgtgctaaagc 26669044  T
Q  308 ctaaagcgacactcattttaaaacggagagaata 341  Q
    |||||||||||||||||||||||||||| |||||    
T  26669043 ctaaagcgacactcattttaaaacggagggaata 26669010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 4123998 - 4123846
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||||||||| |||||||||||||       ||| |||| ||| ||||||||||||||||||||||  ||| ||||||||||||||||||    
T  4123998 tgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctcaataaatactccaacttt--tctttcacacaattttcaatgc 4123901  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatg 263  Q
    || ||||||||||| || |  ||||||| || || || |||| ||||||| |||||    
T  4123900 aa-tttaagtttgttttttccttataaaataaggatagtttaataaaattattatg 4123846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 24163716 - 24163632
Alignment:
Q  251 taaaattgttatgacatttgactactttatttcattctttaatc-tgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||| ||||||||||||||| |||||||||||  |||||  ||||||||| |||||||| ||||||||| |||||||||||    
T  24163716 taaaattgctatgacatttgactattttatttcatttcttaattatgtgtgcaattggctaaaacgacactcactttaaaacgga 24163632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 10494847 - 10494760
Alignment:
Q  166 aataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttattt-ttataaagtacggttattttagtaaa 254  Q
    |||||||| |||||||||||||||  | ||||||||||||||||||| ||||||||||| ||| |||||||||| || || |||||||||    
T  10494847 aataaatagtccaacttttctctc--atacaattttcaatgcaacttaaagtttgtcttttttcttataaagtaagggtagtttagtaaa 10494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 23936715 - 23936599
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||||||||||||| ||||||| |       |||||||| ||| |||||||| |||||||||| ||||||||    |||||||||||||||||||||| |    
T  23936715 tttacattttcaatgcaactttcatttttttcttccaactttaccctcaatatatactccaacctttctctc----acaattttcaatgcaactttaaat 23936620  T
Q  218 ttgtcttatttttataaagta 238  Q
    |||| || || ||||||||||    
T  23936619 ttgtttttttcttataaagta 23936599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 29713395 - 29713325
Alignment:
Q  264 acatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||| ||| ||||| |||||  |||||||| || |||||||||||||||||||||||||||    
T  29713395 acatttgactacttgattccattccttaatacgtgtgcaattgactaaagcgacactcattttaaaacgga 29713325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 34439556 - 34439427
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttct---ctctcacacaattttcaa 204  Q
    |||||||| |||||||||| |||||||||||| |       |||||||| ||| | |||||| ||||||||||||||||   |||| ||||||||| |||    
T  34439556 tgaatgtcattttacatttccaatacaactttcattcttt-cttccaactttaccttcaatatatactccaacttttcttttctcttacacaatttccaa 34439458  T
Q  205 tgcaactttaagtttgtcttatttttataaa 235  Q
    |||||||||| ||||||||| || |||||||    
T  34439457 tgcaactttatgtttgtctttttcttataaa 34439427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 8052407 - 8052467
Alignment:
Q  162 cctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||||||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||||    
T  8052407 cctcaataaatactccaactattctctcccaca--attttcaatgcaactttaggtttgtctt 8052467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 30627110 - 30627211
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||| |||||||||||||||||||       ||  |||| ||| ||||||||||||||| ||||||||||||  | |||||||||||||||||||||| |    
T  30627110 tttatattttcaatacaactttaatttttttctctcaactttaccctcaataaatactcaaacttttctctc--aaacaattttcaatgcaactttaaat 30627207  T
Q  218 ttgt 221  Q
    ||||    
T  30627208 ttgt 30627211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 234196 - 234257
Alignment:
Q  271 actactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacg 332  Q
    ||||||||||| |||||||||||| |||||||| ||| |||| ||||||||||||| |||||    
T  234196 actactttattccattctttaatccgtgtgcaattggttaaaacgacactcattttgaaacg 234257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 11785235 - 11785132
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| ||||||||||||||       |||||||| ||| |||||||||||| || ||||||||||||  |||||||||||||| ||||||||| |    
T  11785235 tttacatttccaatacaactttaatttttt-cttccaactttaccctcaataaatattctaacttttctctc--acacaattttcaatacaactttaaat 11785139  T
Q  218 ttgtctt 224  Q
    || ||||    
T  11785138 ttatctt 11785132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 24555930 - 24555845
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactca-ttttaaaacgga 334  Q
    ||||||||| || |||||||||||||||||||  |||  ||||||||| ||||| | | |||||||||||||| ||||||||||||    
T  24555930 gtaaaattgctacgacatttgactactttattctatttcttaatctgtatgcaatttgttaaagcgacactcatttttaaaacgga 24555845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 34513651 - 34513577
Alignment:
Q  260 tatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||||  |||||||||| ||||  ||||| ||||||||| | |||||| ||||||| |||||||||||||    
T  34513651 tatgacatttagctactttattccatttcttaatatgtgtgcaattagctaaaacgacacttattttaaaacgga 34513577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 1924751 - 1924689
Alignment:
Q  174 ctccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagta 238  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||| || |  ||||||||||    
T  1924751 ctccaacttttctctc--acacaattttcaatgcaactttaattttgtattttccttataaagta 1924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 30627260 - 30627316
Alignment:
Q  279 atttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| ||||| ||||||||| |  ||||| ||||||||||||||||||||||    
T  30627260 atttcattcattaatttgtgtgcaattatctaaaacgacactcattttaaaacggag 30627316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 4132118 - 4132042
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaactttt 184  Q
    ||||||||  |||||||||| |||||||||||||       ||| |||| ||| |||||||||||||||||||||||    
T  4132118 tgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctcaataaatactccaactttt 4132042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 19689938 - 19689874
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaa 215  Q
    |||||||| |||| || || |||||||||||||||||  |||||||||||| ||||| |||||||||    
T  19689938 cttccaactttaatctaaaaaaatactccaacttttc--tctcacacaattgtcaatacaactttaa 19689874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 1924807 - 1924774
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaa 141  Q
    |||||||| |||||||||||||||||||||||||    
T  1924807 tgaatgtcattttacattttcaatacaactttaa 1924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 10540483 - 10540442
Alignment:
Q  246 tttagtaaaattgttatgacatttgactactttatttcattc 287  Q
    |||| |||||||||||||| |||||||||||||||| |||||    
T  10540483 tttaataaaattgttatgatatttgactactttattccattc 10540442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 108 - 326
Target Start/End: Original strand, 321735 - 321953
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||| ||||||||| ||||||||||||||       |||||||| ||| ||||||||| ||||| |||||||| |||||||||||||||||||||    
T  321735 tgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcaataattactcaaacttttcgctctcacacaattttcaatgc 321834  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    || |||||||||||||| ||  ||||||||| ||||||||||||||||||  ||||| |||||||||||||||| ||||| |||| | |||||||| | |    
T  321835 aattttaagtttgtcttgttcctataaagtaaggttattttagtaaaattactatgatatttgactactttattccattccttaacccgtgtgcaattag 321934  T
Q  308 ctaaagcgacactcatttt 326  Q
    |||||||||||||||||||    
T  321935 ctaaagcgacactcatttt 321953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 335
Target Start/End: Complemental strand, 12148 - 12000
Alignment:
Q  186 tctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcat 285  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||| ||  | |||||||||| ||||||| |   ||| || || ||| |||    
T  12148 tctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagg-cagtttagtaaaagtgttatgtctaatgattatttcattccat 12050  T
Q  286 tctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    || ||||||| ||||||| | |||||||||||||||||||| ||||||||    
T  12049 tccttaatctctgtgcaattcgctaaagcgacactcattttgaaacggag 12000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 1448 - 1363
Alignment:
Q  253 aaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagaga 338  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||||||||||||||| |||||||    
T  1448 aaattgctatgacatttgactactttatttcattccttaatctgtgtgcaattgactaaagtgacactcattttaaaaaggagaga 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 62783 - 62859
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcatttt 326  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||    
T  62783 gtaaaattgttatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcatttt 62859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 6326 - 6246
Alignment:
Q  254 aattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||| | ||||||| |||||||||||| |||||||    
T  6326 aattgttatgacatttgactactttatttcattccttaatccgtgtgcaattagctaaagtgacactcattttgaaacgga 6246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 24743 - 24659
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    ||||||||| ||||||||||||||| |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  24743 gtaaaattgctatgacatttgactattttattccattccttaatatgtgtacaaatggctaaagcgacactcattttaaaacgga 24659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 21084 - 20999
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||||||| |||||| |||||||| ||||||| |||| ||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  21084 gtaaaattgctatgacgtttgactattttattttattccttaatctatgtgcaattggctaaagcgacactaattttaaaacggag 20999  T

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Target: scaffold0238 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 16172 - 16031
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    |||| ||||| |||||||||||||       |||| ||| ||| |||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||    
T  16172 tttatatttttaatacaactttaatttttttcttcaaactttaccctcaataaatattccaacctttctctc--acacaattttcaatgcaactttaagt 16075  T
Q  218 ttgtcttatttttataaagtacggttattttagtaaaattgttat 262  Q
    ||||| | |||||||||||||  | || |||||||||| ||||||    
T  16074 ttgtcat-tttttataaagtaaaggtagtttagtaaaaatgttat 16031  T

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Target: scaffold0519 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 7802 - 7732
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 221  Q
    |||||||| |||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  7802 cttccaactttaatctcaataaatacttcaacttttctctc--acacaattttcaatgcaactttaagtttgt 7732  T

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Target: scaffold0119 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 341
Target Start/End: Original strand, 1552 - 1783
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgc 207  Q
    ||||||||  |||| |||| ||||||||||||||       | |||||| ||| ||||||||||  ||||||||||||||||  ||| ||||||||||||    
T  1552 tgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctc--acataattttcaatgc 1649  T
Q  208 aactttaagtttgtcttatttttataaagtacggttattttagtaaaattgttatgacatttgactactttatttcattctttaatctgtgtgcaagtgg 307  Q
    |||||||| |||||||| || |||||||||| ||  | ||||||||||  |||||  |   | | || || |||  |||  ||||||| ||||| |  |     
T  1650 aactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatctttgtgctaaagc 1749  T
Q  308 ctaaagcgacactcattttaaaacggagagaata 341  Q
    |||||||||||||||||||||||||||| |||||    
T  1750 ctaaagcgacactcattttaaaacggagggaata 1783  T

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Target: scaffold0886 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 4211 - 4098
Alignment:
Q  149 cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtc-ttatttttataaagtacggttattt 247  Q
    |||||||| ||| ||||||||||||||||||||||||  ||||||| ||||||||||  ||||||||||||||| || ||||||||||||| ||  | ||    
T  4211 cttccaactttatcctcaataaatactccaacttttc--tctcacataattttcaatcaaactttaagtttgtcattttttttataaagtaaggacaatt 4114  T
Q  248 tagtaaaattgttatg 263  Q
    | |||||| |||||||    
T  4113 tcgtaaaaatgttatg 4098  T

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Target: scaffold0194 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 8167 - 8274
Alignment:
Q  108 tgaatgtcgttttacattttcaatacaactttaannnnnnn--cttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaat 205  Q
    ||||||||  ||||||||||||||||||||||||         ||| |||| |||||||||| |||||||||||||||  |||||||||||||||||||     
T  8167 tgaatgtcaatttacattttcaatacaactttaatttttttttctttcaactttaacctcaaaaaatactccaacttt--tctctcacacaattttcaaa 8264  T
Q  206 gcaactttaa 215  Q
    ||||||||||    
T  8265 gcaactttaa 8274  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 158154 - 158223
Alignment:
Q  153 caacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtctt 224  Q
    |||| ||| |||||||||||||| ||||||||||||| || |  ||||||||||||||||||||||||||||    
T  158154 caactttaccctcaataaatactacaacttttctctcgcata--attttcaatgcaactttaagtttgtctt 158223  T

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Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 158265 - 158322
Alignment:
Q  276 tttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacgga 334  Q
    |||||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||    
T  158265 tttatttcattctttaatttgtgt-caattggctaaaacgacactcattttaaaacgga 158322  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 31722 - 31785
Alignment:
Q  279 atttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagagaataa 342  Q
    ||||||||| ||||| ||||||||| |||||| | | ||||||||||| |||||||| ||||||    
T  31722 atttcattcgttaatttgtgtgcaattggctacaacaacactcattttgaaacggagggaataa 31785  T

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Target: scaffold0189 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 13192 - 13088
Alignment:
Q  118 tttacattttcaatacaactttaannnnnnncttccaacattaacctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagt 217  Q
    ||||||||| |||||||| |||||       || ||||| ||| |||||||||||||| |||||||||||   ||||  |||||||||| |||||||| |    
T  13192 tttacatttccaatacaattttaatttttttctcccaactttaccctcaataaatacttcaacttttctccggcaca--attttcaatgtaactttaatt 13095  T
Q  218 ttgtctt 224  Q
    |||||||    
T  13094 ttgtctt 13088  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 62993 - 63046
Alignment:
Q  277 ttatttcattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaa 330  Q
    ||||| ||||| ||||||| ||||||| ||||||||  ||||||||||||||||    
T  62993 ttattccattcattaatctatgtgcaattggctaaaatgacactcattttaaaa 63046  T

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Target: scaffold2107 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 387 - 339
Alignment:
Q  250 gtaaaattgttatgacatttgactactttatttcattctttaatctgtg 298  Q
    |||||| ||| |||||||||||||||||||||| |||| ||||| ||||    
T  387 gtaaaaatgtcatgacatttgactactttatttgattccttaatttgtg 339  T

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Target: scaffold0565 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 9630 - 9578
Alignment:
Q  283 cattctttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggag 335  Q
    ||||| ||||| |||||| || |||||||| ||||||||||||| ||||||||    
T  9630 cattccttaatatgtgtgtaattggctaaaacgacactcattttgaaacggag 9578  T

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