View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17203_low_126 (Length: 214)
Name: NF17203_low_126
Description: NF17203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17203_low_126 |
 |  |
|
| [»] chr4 (38 HSPs) |
 |  |
|
| [»] chr5 (7 HSPs) |
 |  |
|
| [»] chr3 (5 HSPs) |
 |  |
|
| [»] chr8 (6 HSPs) |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 72; Significance: 6e-33; HSPs: 38)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 48870499 - 48870404
Alignment:
| Q |
119 |
acacaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
48870499 |
acacaaaggtatttgtttgtgaaatccggtggatggattccataggtagagggttggagcacaatgcaataatataaagcctctacatgaaccttt |
48870404 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 48886185 - 48886090
Alignment:
| Q |
119 |
acacaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
48886185 |
acacaaaggtatttgtttgtgaaatccggtggatggattccataggtagagggttggagcacaatgcaataatataaagcctctacatgaaccttt |
48886090 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 48875797 - 48875708
Alignment:
| Q |
125 |
aggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||| || |||||||| |
|
|
| T |
48875797 |
aggtatttgtttgtgaaatccggtggatggattccataggtagaggcttgaaaaacaatgcaacagtataaagcctctgcaagaaccttt |
48875708 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 50250910 - 50251003
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||| | | || || |||||||| ||||||||||||||||| |
|
|
| T |
50250910 |
acaaaggtatttgtatgtgaagcccggtggatggattccataggtagaggcttgaaaaacagtggaaaaatataaatcctctacatgaaccttt |
50251003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 48898752 - 48898630
Alignment:
| Q |
46 |
acaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaatgtttatatgaat---tggaacacaaaggtatttgtttgtgaac |
142 |
Q |
| |
|
||||| ||||||| ||||||||||||||| | || |||||||||||||||||||||| | | | ||| | | | |||||||||||||||||||| | |
|
|
| T |
48898752 |
acaataaaaccactaagtaatcatctgttaactgatcatacccaaaaccatagaaatataaagaaaaatgattaggagacaaaggtatttgtttgtgagc |
48898653 |
T |
 |
| Q |
143 |
tccggtggatggattccataggt |
165 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
48898652 |
tccggtggatggattccataggt |
48898630 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 45372191 - 45372282
Alignment:
| Q |
123 |
aaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
|||||||||||||| ||||| || ||||||||||||||||| |||| | ||||| | |||||| |||||||||||||||||||||||||| |
|
|
| T |
45372191 |
aaaggtatttgtttctgaacaccagtggatggattccatagatagaaggttgaattaccatgcaaaaatataaaccctctacatgaaccttt |
45372282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 48170700 - 48170789
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaac |
210 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| | |||||| |||||||| |||||||| |||| |
|
|
| T |
48170700 |
acaaaggtatttgtttatgaactcgggtggatggattccataggtagaaacttgaattatgatgcaaaaatataaagcctctacaggaac |
48170789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 48147752 - 48147802
Alignment:
| Q |
48 |
aatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatag |
98 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
48147752 |
aatgaaaccaccaagtaatcatctgttaactggtcatacccaaaaccatag |
48147802 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 48735419 - 48735469
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaa |
100 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
48735419 |
tgaaaccaccaagtaatcatctgttaaatggtcatacccaaaaccatagaa |
48735469 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 48852618 - 48852576
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccatag |
163 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48852618 |
acaaaggtatttgtttgtgaactccggtggatggattccatag |
48852576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 48705479 - 48705571
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggt--agaggcttgaagcagaatgcaacaatataaaccctctacatgaacc |
211 |
Q |
| |
|
||||||||||||||||||||| ||| || ||||||||||| |||| ||||| |||||||| |||| ||||||||||| ||||| ||| |||| |
|
|
| T |
48705479 |
acaaaggtatttgtttgtgaaatccagtagatggattccacaggtagagagggttgaagcacaatgaaacaatataaaacctctgcattaacc |
48705571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 49044316 - 49044405
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaac |
210 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| || ||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
49044316 |
acaaaggtatttgtttgtgaactctagtggatggattccatagataagttgttgcagcacgatgcaaaaatataaaccctctacatgaac |
49044405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 48863181 - 48863126
Alignment:
| Q |
124 |
aaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagca |
179 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
48863181 |
aaggtatttgtttctgagctccggtggatggattccataggtagatgtttgaagca |
48863126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 50250818 - 50250865
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
50250818 |
tgaaaccaccaaataatcatctgttgagtggtcataaccaaaaccata |
50250865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 7877777 - 7877727
Alignment:
| Q |
46 |
acaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccat |
96 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||| |||||||||| |
|
|
| T |
7877777 |
acaatgaaaccaccaagtaatcatctcttgattggtcataaccaaaaccat |
7877727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 49041201 - 49041320
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaatgt---ttat-atgaattggaacacaaaggtatttgtttgtgaactcc |
145 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||||||||||||||||||| | | || ||| ||| | | |||||||||| |||||||| |||| |
|
|
| T |
49041201 |
tgaaaccatcaagtaatcatctgttgacggatcatacccaaaaccatagaaatttaagtaatcatg-attaggaggcaaaggtattagtttgtgagctcc |
49041299 |
T |
 |
| Q |
146 |
ggtggatggattccataggta |
166 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
49041300 |
ggtggatgggttccataggta |
49041320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 37827114 - 37827207
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||||||||||| ||||| | || ||| | ||||| |||| ||||||||||| ||||||||| |
|
|
| T |
37827114 |
acaagggtatttgtttgtgaaatccagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacctgaaccttt |
37827207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 48891367 - 48891274
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||||| |||| | |||| || |||||| | || |||||||||||||||| |||| |
|
|
| T |
48891367 |
acaaaggtatttgtttgtgaagtccagtggatggattccatacatagatgtttgagttagtatgcaaaagtacaaaccctctacatgaagcttt |
48891274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 7908373 - 7908325
Alignment:
| Q |
46 |
acaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaacc |
94 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
7908373 |
acaatgaaaccaccaagtaatcatctcttgactggtcataaccaaaacc |
7908325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 45384905 - 45384957
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
|||||||||||| ||||||| |||||| || |||||||||||||||||||||| |
|
|
| T |
45384905 |
tgaaaccaccaaataatcatttgttgactgatcatacccaaaaccatagaaat |
45384957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 48902972 - 48902924
Alignment:
| Q |
54 |
accaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
48902972 |
accatcaagtaatcatctcttgagtggtcatacccaaaaccataaaaat |
48902924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 33133934 - 33133989
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaa |
176 |
Q |
| |
|
|||||||||||||||| ||||||| |||| ||||||||||||||| || ||||||| |
|
|
| T |
33133934 |
acaaaggtatttgtttatgaactcgggtgaatggattccataggtggaagcttgaa |
33133989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 50672451 - 50672412
Alignment:
| Q |
123 |
aaaggtatttgtttgtgaactccggtggatggattccata |
162 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
50672451 |
aaaggtatttgtttgtgaactcctgtggatggattccata |
50672412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 47207847 - 47207762
Alignment:
| Q |
125 |
aggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaac |
210 |
Q |
| |
|
|||||||||| | | |||||| ||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
47207847 |
aggtatttgtctctcaactccagtggatggattccataggtagtagcttgaaagtcgatgcaaaaatataaagcctctacatgaac |
47207762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 48705396 - 48705448
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||||| |||||||||| ||||| |
|
|
| T |
48705396 |
tgaaacaaccaagtaatcatctgttgactgatcatatccaaaaccatggaaat |
48705448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 49048613 - 49048657
Alignment:
| Q |
53 |
aaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
49048613 |
aaccaccaaataatcatctgttgatgggtcatacccaaaaccata |
49048657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 50669112 - 50669052
Alignment:
| Q |
37 |
gatcattgcacaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||||| | |||||||||| ||||||||||||||| |||| ||||||| ||||||||||| |
|
|
| T |
50669112 |
gatcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccata |
50669052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 7237763 - 7237806
Alignment:
| Q |
53 |
aaccaccaagtaatcatctgttgagtggtcatacccaaaaccat |
96 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| |||||||||| |
|
|
| T |
7237763 |
aaccaccaagtaatcatctcttgactggtcataaccaaaaccat |
7237806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 7771439 - 7771396
Alignment:
| Q |
53 |
aaccaccaagtaatcatctgttgagtggtcatacccaaaaccat |
96 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| |||||||||| |
|
|
| T |
7771439 |
aaccaccaagtaatcatctcttgactggtcataaccaaaaccat |
7771396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 7790124 - 7790081
Alignment:
| Q |
53 |
aaccaccaagtaatcatctgttgagtggtcatacccaaaaccat |
96 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| |||||||||| |
|
|
| T |
7790124 |
aaccaccaagtaatcatctcttgactggtcataaccaaaaccat |
7790081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 50669007 - 50668916
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaacct |
212 |
Q |
| |
|
|||| ||||| ||||| |||| || ||||||||||||||||| | ||| | | |||| | ||||||| |||||||| |||||||| |||||| |
|
|
| T |
50669007 |
acaatggtatctgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacct |
50668916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 48852708 - 48852663
Alignment:
| Q |
52 |
aaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||| |||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
48852708 |
aaactaccaagtaatcatcggttgacgggtcatacccaaaaccata |
48852663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 48870584 - 48870539
Alignment:
| Q |
52 |
aaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
||||||| ||||||||||||||| | || ||||||||||||||||| |
|
|
| T |
48870584 |
aaaccactaagtaatcatctgttaactgatcatacccaaaaccata |
48870539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 48875888 - 48875843
Alignment:
| Q |
52 |
aaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
||||||||||||||||||||| | | || ||||||||||||||||| |
|
|
| T |
48875888 |
aaaccaccaagtaatcatctgctaactgatcatacccaaaaccata |
48875843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 48886270 - 48886225
Alignment:
| Q |
52 |
aaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
||||||| ||||||||||||||| | || ||||||||||||||||| |
|
|
| T |
48886270 |
aaaccactaagtaatcatctgttaactgatcatacccaaaaccata |
48886225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 49048704 - 49048749
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggta |
166 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||| ||||| |
|
|
| T |
49048704 |
acaaaggtatttgtctgtgaactctagtggatggattccaaaggta |
49048749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 45366243 - 45366295
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
|||||| ||||| |||||||||||| | ||||||||| |||||||||||||| |
|
|
| T |
45366243 |
tgaaacaaccaaataatcatctgttaatgggtcataccaaaaaccatagaaat |
45366295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 48863290 - 48863214
Alignment:
| Q |
18 |
tcatctgagtttggaattcgatcattgcacaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaacc |
94 |
Q |
| |
|
||||||||||||||||| | ||||| | | |||||||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
48863290 |
tcatctgagtttggaatactatcatacgatactgaaaccaccaagtaatcatcttctgacggatcatacccaaaacc |
48863214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 60; Significance: 9e-26; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 51 - 213
Target Start/End: Complemental strand, 24367190 - 24367025
Alignment:
| Q |
51 |
gaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaatgtttatatgaat---tggaacacaaaggtatttgtttgtgaactccgg |
147 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||||||||||||||||| | |||| ||| | | |||||||| ||| | ||||||| || |
|
|
| T |
24367190 |
gaaaccaccaagtaatcatctgttgacttgtcatacccaaaaccatagaaatctgcatataaatgattaagaggcaaaggtaattgcctatgaactctgg |
24367091 |
T |
 |
| Q |
148 |
tggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaacctt |
213 |
Q |
| |
|
||||||| ||||||||||| | | |||||| ||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
24367090 |
tggatgggttccataggtaaatgtttgaagaagagtgcaacaatataaaccctcgacatgaacctt |
24367025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 24310135 - 24310047
Alignment:
| Q |
124 |
aaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaacct |
212 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||| ||| | | ||||| | | | |||||||||||| ||||||||||||||| |
|
|
| T |
24310135 |
aaggtatttgtctatgaactccggtggatggattccatacgtaaatgtttgaaaaacactccaacaatataaaacctctacatgaacct |
24310047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 24340452 - 24340405
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||||||||||||||||||| |||||| | |||||||||||||||||| |
|
|
| T |
24340452 |
tgaaaccaccaagtaatcatatgttgattcgtcatacccaaaaccata |
24340405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 24352817 - 24352770
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||||||||||||||||||| |||||| | |||||||||||||||||| |
|
|
| T |
24352817 |
tgaaaccaccaagtaatcatatgttgattcgtcatacccaaaaccata |
24352770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 24310250 - 24310163
Alignment:
| Q |
15 |
acatcatctgagtttggaattcgatcattgcacaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
||||||| ||||| |||||| | ||||| | | | | |||| ||||||||||||||| |||| | |||||| |||||||||||||||| |
|
|
| T |
24310250 |
acatcatgtgagtatggaatacaatcataggatactaaaactaccaagtaatcatctcttgactcgtcataaccaaaaccatagaaat |
24310163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 24369524 - 24369477
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
||||||||||| ||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
24369524 |
tgaaaccaccaggtaatcatctgttgactcgtcatagccaaaaccata |
24369477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 42562342 - 42562544
Alignment:
| Q |
15 |
acatcatctgagtttggaattcgatcattgcacaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaatgtt---tata-t |
110 |
Q |
| |
|
||||||||||||| ||||||| ||||| | | | ||||||||| || ||||||| ||||||||| ||||||||||||||||| |||| |||| | |
|
|
| T |
42562342 |
acatcatctgagtatggaatttgatcacgggaaattgaaaccactaaataatcatttgttgagtgatcatacccaaaaccatataaattaaaaatataat |
42562441 |
T |
 |
| Q |
111 |
gaattggaacacaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaac |
210 |
Q |
| |
|
||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||| || || | || ||||||| | ||||||||||||||| |||| |
|
|
| T |
42562442 |
caataggag-acaaaggtatttgtttgtgatgtccgatggatggattccataggtagaagcatgcaccacaatgcaaaagtataaaccctctacacgaac |
42562540 |
T |
 |
| Q |
211 |
cttt |
214 |
Q |
| |
|
|||| |
|
|
| T |
42562541 |
cttt |
42562544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 29696250 - 29696198
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
||||| ||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
29696250 |
tgaaatcaccaagtaatcatctgttgactcgtcatacccaaaaccatagaaat |
29696198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 29688061 - 29688011
Alignment:
| Q |
126 |
ggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaa |
176 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
29688061 |
ggtatttgtctgtgaactccggtggatggattccatagataaaggcttgaa |
29688011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 179074 - 179026
Alignment:
| Q |
54 |
accaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
|||| |||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
179074 |
accaacaagtaatcatctgttgactcctcatacccaaaaccatagaaat |
179026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 29696165 - 29696113
Alignment:
| Q |
123 |
aaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttga |
175 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
29696165 |
aaaggtattcgtttgtgaaatccggtggatggattccatatacagaggcttga |
29696113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 29712599 - 29712679
Alignment:
| Q |
134 |
tttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||| | |||| || || ||| | ||||||||||||||| |||||||| |
|
|
| T |
29712599 |
tttgtgaactccagtggatggattccatagacagagacatgaaccacaactcaaaagtataaaccctctacacgaaccttt |
29712679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 29261201 - 29261158
Alignment:
| Q |
125 |
aggtatttgtttgtgaactccggtggatggattccataggtaga |
168 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||||| |||| |
|
|
| T |
29261201 |
aggtatttgtttgtggactccggttgatggattccatagataga |
29261158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 3e-22; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 21015761 - 21015672
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaac |
210 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||| | ||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
21015761 |
acaaaggtatttgtttgtgaactctagtggatggattccataggtagatgtttgaatcatggtgcaaaaatataaaccctctacatgaac |
21015672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 21979770 - 21979863
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
|||||||||||||||| |||| ||| || || || ||||||| |||||| |||||| | | || || |||||||| ||||||||||||||||| |
|
|
| T |
21979770 |
acaaaggtatttgtttttgaagtccagtagacgggttccatatgtagagtcttgaaaaacagtggaaaaatataaatcctctacatgaaccttt |
21979863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 21015849 - 21015806
Alignment:
| Q |
54 |
accaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
21015849 |
accaccaaataatcatctgttgatgggtcatacccaaaaccata |
21015806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 21979678 - 21979722
Alignment:
| Q |
53 |
aaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
||||||||||||||||| | |||| |||||||| ||||||||||| |
|
|
| T |
21979678 |
aaccaccaagtaatcatttcttgactggtcataaccaaaaccata |
21979722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 47452028 - 47452120
Alignment:
| Q |
122 |
caaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| ||||| | |||||| | || || | |||||||||||||||||||||||| |
|
|
| T |
47452028 |
caaaggtatttgtttgtgaactccagtggatggattccatatgtagatgtttgaagaacaacttaaaagtataaaccctctacatgaaccttt |
47452120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 11005994 - 11006037
Alignment:
| Q |
54 |
accaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
11005994 |
accaccaagtaatcatctcttgaatggtcatacccaaaaccata |
11006037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 11015641 - 11015728
Alignment:
| Q |
123 |
aaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaac |
210 |
Q |
| |
|
|||||||||||||||||| ||| || ||||||||||||||||||| | |||||| | || ||| | |||||| ||||||||||||| |
|
|
| T |
11015641 |
aaaggtatttgtttgtgatgtccagttgatggattccataggtagatgtttgaagaacaagtcaaaactataaatcctctacatgaac |
11015728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 11024569 - 11024612
Alignment:
| Q |
54 |
accaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
11024569 |
accaccaagtaatcatctcttgaatggtcatacccaaaaccata |
11024612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 11015557 - 11015600
Alignment:
| Q |
54 |
accaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
|||||||||||||||||| || | |||||||||||||||||||| |
|
|
| T |
11015557 |
accaccaagtaatcatctcttaaatggtcatacccaaaaccata |
11015600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 30120435 - 30120478
Alignment:
| Q |
125 |
aggtatttgtttgtgaactccggtggatggattccataggtaga |
168 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
30120435 |
aggtatttgtttgtggactccggtggatggattccatagataga |
30120478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 48883753 - 48883660
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
||||||||||||||||||||| ||| ||| |||||||||||| | ||| | | |||| | |||||| || | |||||||||||| |||||||| |
|
|
| T |
48883753 |
acaaaggtatttgtttgtgaaatccagtgtatggattccatatgcagatgttggaagaaccatgcaaaaacagaaaccctctacacgaaccttt |
48883660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 15348817 - 15348724
Alignment:
| Q |
121 |
acaaaggtatttgtttgtgaactccggtggatggattccataggtagaggcttgaagcagaatgcaacaatataaaccctctacatgaaccttt |
214 |
Q |
| |
|
||||||||| || | |||||| ||||||||||||||||||||| |||||| ||||| | | | ||| | || ||| ||||||||||||||||| |
|
|
| T |
15348817 |
acaaaggtacttttctgtgaaatccggtggatggattccatagatagaggattgaataatagttcaaaagtacaaagcctctacatgaaccttt |
15348724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 4031938 - 4031990
Alignment:
| Q |
50 |
tgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
||||||||||| ||| |||| |||||| |||||||||||||||||||| |||| |
|
|
| T |
4031938 |
tgaaaccaccaggtagtcatttgttgactggtcatacccaaaaccatataaat |
4031990 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 12200355 - 12200304
Alignment:
| Q |
46 |
acaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
||||| |||||||||||||||||||| |||| ||||||| ||||||||||| |
|
|
| T |
12200355 |
acaataaaaccaccaagtaatcatctcttgaccggtcataaccaaaaccata |
12200304 |
T |
 |
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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 12444783 - 12444732
Alignment:
| Q |
46 |
acaatgaaaccaccaagtaatcatctgttgagtggtcatacccaaaaccata |
97 |
Q |
| |
|
||||| |||||||||||||||||||| |||| ||||||| ||||||||||| |
|
|
| T |
12444783 |
acaataaaaccaccaagtaatcatctcttgaccggtcataaccaaaaccata |
12444732 |
T |
 |
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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 15348898 - 15348848
Alignment:
| Q |
52 |
aaaccaccaagtaatcatctgttgagtggtcatacccaaaaccatagaaat |
102 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||| |||| |||||||| |
|
|
| T |
15348898 |
aaaccaccaagtaatcatcttttaattggtcatacccgaaactatagaaat |
15348848 |
T |
 |
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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 4032032 - 4032072
Alignment:
| Q |
123 |
aaaggtatttgtttgtgaactccggtggatggattccatag |
163 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
4032032 |
aaaggtatttgtttgtgaactccaatggatgaattccatag |
4032072 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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