View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17203_low_40 (Length: 423)

Name: NF17203_low_40
Description: NF17203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17203_low_40
NF17203_low_40
[»] chr6 (37 HSPs)
chr6 (175-364)||(34706720-34706910)
chr6 (184-366)||(34712131-34712314)
chr6 (180-362)||(1127817-1128000)
chr6 (229-333)||(31379418-31379522)
chr6 (177-364)||(32929507-32929694)
chr6 (177-365)||(392095-392283)
chr6 (263-362)||(22021633-22021732)
chr6 (170-365)||(2580951-2581146)
chr6 (177-364)||(4215695-4215882)
chr6 (177-364)||(23402138-23402325)
chr6 (230-364)||(7851212-7851345)
chr6 (238-296)||(22021731-22021789)
chr6 (178-365)||(12145117-12145304)
chr6 (271-364)||(20897948-20898039)
chr6 (177-364)||(27433492-27433679)
chr6 (184-361)||(32985199-32985376)
chr6 (230-362)||(2350654-2350785)
chr6 (268-361)||(3246178-3246270)
chr6 (271-364)||(3515766-3515857)
chr6 (271-364)||(31280321-31280412)
chr6 (177-215)||(1603996-1604034)
chr6 (178-364)||(18276612-18276800)
chr6 (271-365)||(21878442-21878534)
chr6 (264-333)||(252407-252476)
chr6 (271-364)||(34396622-34396713)
chr6 (184-215)||(392102-392133)
chr6 (184-215)||(8701343-8701374)
chr6 (271-350)||(11115190-11115267)
chr6 (184-215)||(27433498-27433529)
chr6 (308-358)||(34706851-34706901)
chr6 (283-364)||(12525719-12525799)
chr6 (177-214)||(24663200-24663237)
chr6 (187-215)||(4215704-4215732)
chr6 (251-311)||(11633970-11634030)
chr6 (177-213)||(26467123-26467159)
chr6 (266-334)||(26879236-26879303)
chr6 (272-364)||(29451211-29451300)
[»] chr1 (48 HSPs)
chr1 (178-364)||(28725905-28726092)
chr1 (178-365)||(38595752-38595940)
chr1 (227-367)||(52702195-52702335)
chr1 (184-366)||(30664173-30664355)
chr1 (229-364)||(27457002-27457137)
chr1 (175-364)||(10679510-10679704)
chr1 (177-365)||(5694320-5694508)
chr1 (177-364)||(15227739-15227926)
chr1 (177-364)||(29657771-29657958)
chr1 (185-365)||(24178470-24178650)
chr1 (256-362)||(37350117-37350222)
chr1 (177-364)||(14350278-14350463)
chr1 (256-365)||(17333362-17333468)
chr1 (177-364)||(18043162-18043349)
chr1 (230-364)||(9266781-9266914)
chr1 (285-364)||(29683195-29683274)
chr1 (239-322)||(33644397-33644480)
chr1 (178-264)||(23822523-23822608)
chr1 (157-218)||(29210540-29210601)
chr1 (177-364)||(51065747-51065934)
chr1 (176-366)||(3784711-3784901)
chr1 (184-361)||(12072068-12072245)
chr1 (184-364)||(42769996-42770176)
chr1 (271-364)||(29210413-29210504)
chr1 (179-365)||(38162849-38163035)
chr1 (229-264)||(23789547-23789582)
chr1 (271-362)||(36446420-36446508)
chr1 (271-364)||(13961212-13961302)
chr1 (177-215)||(48282858-48282896)
chr1 (177-218)||(38701936-38701977)
chr1 (271-362)||(9413973-9414062)
chr1 (175-218)||(21112678-21112721)
chr1 (184-215)||(28726055-28726086)
chr1 (184-215)||(29657777-29657808)
chr1 (271-366)||(30294476-30294569)
chr1 (184-215)||(38595902-38595933)
chr1 (285-364)||(39912387-39912465)
chr1 (177-215)||(19940547-19940585)
chr1 (184-214)||(29683201-29683231)
chr1 (184-214)||(42770140-42770170)
chr1 (264-298)||(45844424-45844458)
chr1 (314-355)||(19940557-19940598)
chr1 (271-364)||(35985716-35985806)
chr1 (285-362)||(38702041-38702117)
chr1 (177-218)||(47010139-47010180)
chr1 (324-361)||(48383257-48383294)
chr1 (325-361)||(19940683-19940719)
chr1 (187-215)||(19940685-19940713)
[»] chr5 (37 HSPs)
chr5 (184-364)||(14214055-14214236)
chr5 (227-366)||(40608586-40608724)
chr5 (178-339)||(31467744-31467906)
chr5 (229-364)||(21944912-21945047)
chr5 (228-365)||(39234830-39234966)
chr5 (227-362)||(1383324-1383457)
chr5 (227-364)||(16972176-16972313)
chr5 (227-336)||(30889480-30889589)
chr5 (228-365)||(32188042-32188177)
chr5 (235-331)||(14349592-14349688)
chr5 (175-366)||(34650830-34651020)
chr5 (177-366)||(11957966-11958155)
chr5 (230-364)||(10054406-10054538)
chr5 (271-365)||(10069968-10070060)
chr5 (176-364)||(13661808-13661996)
chr5 (177-364)||(35132522-35132708)
chr5 (264-339)||(6042135-6042209)
chr5 (271-366)||(35504335-35504428)
chr5 (230-365)||(6283561-6283695)
chr5 (271-367)||(21547489-21547582)
chr5 (173-215)||(1919622-1919664)
chr5 (177-218)||(8787485-8787526)
chr5 (264-312)||(1069610-1069658)
chr5 (184-215)||(10054501-10054532)
chr5 (184-215)||(10069975-10070006)
chr5 (177-215)||(5091899-5091937)
chr5 (177-215)||(8927555-8927593)
chr5 (271-365)||(9721702-9721794)
chr5 (271-361)||(19647753-19647841)
chr5 (325-358)||(1919620-1919653)
chr5 (271-364)||(4837258-4837348)
chr5 (271-364)||(8787339-8787430)
chr5 (185-218)||(19647684-19647717)
chr5 (262-334)||(5302365-5302437)
chr5 (271-363)||(20175228-20175318)
chr5 (175-215)||(20983517-20983557)
chr5 (264-312)||(29571571-29571619)
[»] chr7 (42 HSPs)
chr7 (178-364)||(6097336-6097523)
chr7 (227-364)||(32805538-32805675)
chr7 (177-362)||(19434495-19434680)
chr7 (227-361)||(30924040-30924174)
chr7 (169-364)||(34556883-34557076)
chr7 (177-365)||(38128290-38128479)
chr7 (227-364)||(20402389-20402526)
chr7 (227-365)||(13106364-13106502)
chr7 (248-364)||(45842844-45842959)
chr7 (177-364)||(34333284-34333470)
chr7 (271-364)||(18485961-18486052)
chr7 (178-364)||(24798403-24798588)
chr7 (178-366)||(24438475-24438663)
chr7 (176-364)||(34606261-34606449)
chr7 (178-364)||(29993487-29993673)
chr7 (271-365)||(43594131-43594223)
chr7 (271-364)||(12218531-12218622)
chr7 (267-364)||(34435744-34435840)
chr7 (271-364)||(34546409-34546500)
chr7 (271-364)||(4628566-4628657)
chr7 (325-366)||(30703687-30703728)
chr7 (178-215)||(31320383-31320420)
chr7 (178-215)||(35791653-35791690)
chr7 (271-364)||(37631637-37631728)
chr7 (271-363)||(47656981-47657071)
chr7 (184-215)||(18485967-18485998)
chr7 (304-363)||(28587911-28587968)
chr7 (184-215)||(34333290-34333321)
chr7 (184-215)||(36786057-36786088)
chr7 (264-319)||(41468719-41468774)
chr7 (271-365)||(8754680-8754772)
chr7 (304-365)||(18470066-18470127)
chr7 (285-366)||(1736978-1737058)
chr7 (264-301)||(4088488-4088525)
chr7 (271-364)||(5239285-5239376)
chr7 (323-364)||(27456258-27456298)
chr7 (325-358)||(31320381-31320414)
chr7 (325-358)||(35791651-35791684)
chr7 (187-215)||(30703698-30703726)
chr7 (325-365)||(36785481-36785521)
chr7 (264-332)||(38022579-38022647)
chr7 (314-366)||(47118100-47118152)
[»] chr4 (57 HSPs)
chr4 (179-361)||(16572488-16572671)
chr4 (168-355)||(28119896-28120084)
chr4 (184-364)||(292114-292295)
chr4 (176-364)||(37402757-37402939)
chr4 (227-362)||(22225795-22225930)
chr4 (229-361)||(34151124-34151255)
chr4 (169-364)||(11893392-11893588)
chr4 (235-364)||(55594131-55594259)
chr4 (231-364)||(10110053-10110188)
chr4 (229-324)||(6493751-6493846)
chr4 (235-365)||(8749857-8749986)
chr4 (178-366)||(54897306-54897494)
chr4 (187-275)||(28120058-28120147)
chr4 (271-365)||(32217044-32217136)
chr4 (227-289)||(47092657-47092719)
chr4 (242-363)||(3999451-3999571)
chr4 (271-364)||(18067974-18068065)
chr4 (177-364)||(29591189-29591376)
chr4 (271-364)||(43202478-43202569)
chr4 (178-364)||(43944507-43944692)
chr4 (176-218)||(16820998-16821040)
chr4 (271-365)||(32202575-32202667)
chr4 (271-364)||(789625-789716)
chr4 (271-364)||(15186243-15186334)
chr4 (177-364)||(16536048-16536235)
chr4 (323-364)||(46688355-46688396)
chr4 (285-364)||(4268930-4269008)
chr4 (271-366)||(28755619-28755711)
chr4 (285-364)||(47231980-47232058)
chr4 (236-366)||(54054546-54054675)
chr4 (177-218)||(54054675-54054716)
chr4 (178-364)||(12356244-12356430)
chr4 (174-218)||(33108669-33108713)
chr4 (184-215)||(4268971-4269002)
chr4 (264-339)||(9964745-9964820)
chr4 (184-215)||(10426066-10426097)
chr4 (184-215)||(15186249-15186280)
chr4 (184-215)||(18068028-18068059)
chr4 (264-362)||(20654673-20654774)
chr4 (274-313)||(24142268-24142307)
chr4 (175-214)||(53374903-53374942)
chr4 (184-215)||(54897314-54897345)
chr4 (271-365)||(3783596-3783688)
chr4 (177-215)||(7769087-7769125)
chr4 (271-364)||(55882684-55882774)
chr4 (271-364)||(4089142-4089233)
chr4 (271-364)||(7768938-7769029)
chr4 (271-363)||(15023444-15023534)
chr4 (177-214)||(18067878-18067915)
chr4 (177-218)||(36395245-36395286)
chr4 (271-364)||(42898841-42898932)
chr4 (178-214)||(4268822-4268858)
chr4 (306-358)||(16820980-16821032)
chr4 (271-363)||(19503200-19503289)
chr4 (178-218)||(39877247-39877287)
chr4 (325-365)||(40120005-40120045)
chr4 (325-365)||(43012730-43012770)
[»] chr8 (55 HSPs)
chr8 (229-365)||(18955692-18955828)
chr8 (227-365)||(29566699-29566837)
chr8 (227-365)||(39751521-39751659)
chr8 (177-363)||(43714187-43714373)
chr8 (227-365)||(24261364-24261502)
chr8 (227-365)||(40267920-40268058)
chr8 (227-364)||(42655326-42655463)
chr8 (187-332)||(39206217-39206363)
chr8 (242-337)||(37479594-37479689)
chr8 (177-318)||(2490156-2490297)
chr8 (229-325)||(2270564-2270659)
chr8 (178-365)||(34228681-34228868)
chr8 (235-364)||(4811557-4811686)
chr8 (177-361)||(13643015-13643198)
chr8 (177-361)||(13743440-13743623)
chr8 (179-365)||(30675574-30675759)
chr8 (176-364)||(27988498-27988685)
chr8 (176-364)||(28045800-28045987)
chr8 (178-363)||(16888544-16888728)
chr8 (175-364)||(168466-168655)
chr8 (309-364)||(2490320-2490375)
chr8 (177-364)||(4537743-4537930)
chr8 (275-359)||(33899108-33899190)
chr8 (176-365)||(2805258-2805447)
chr8 (230-364)||(33357182-33357315)
chr8 (240-334)||(22199239-22199333)
chr8 (271-365)||(37373205-37373296)
chr8 (324-365)||(16394207-16394248)
chr8 (285-362)||(20831661-20831737)
chr8 (286-365)||(12652629-12652707)
chr8 (177-364)||(9063051-9063237)
chr8 (178-218)||(16394061-16394101)
chr8 (271-363)||(21595848-21595937)
chr8 (325-365)||(23722247-23722287)
chr8 (308-359)||(2490162-2490213)
chr8 (167-214)||(9934563-9934609)
chr8 (184-215)||(13643018-13643049)
chr8 (184-215)||(13743443-13743474)
chr8 (184-215)||(16394210-16394241)
chr8 (184-215)||(30675721-30675752)
chr8 (264-347)||(37713989-37714071)
chr8 (184-215)||(39751621-39751652)
chr8 (184-215)||(45185052-45185083)
chr8 (314-364)||(5725596-5725646)
chr8 (271-364)||(11112639-11112730)
chr8 (177-218)||(18955842-18955883)
chr8 (271-364)||(43119217-43119308)
chr8 (184-217)||(43723739-43723772)
chr8 (186-218)||(7304526-7304558)
chr8 (330-362)||(9254069-9254101)
chr8 (184-212)||(9254069-9254097)
chr8 (187-215)||(23722257-23722285)
chr8 (304-364)||(36923790-36923849)
chr8 (264-320)||(42449008-42449064)
chr8 (185-213)||(43714339-43714367)
[»] chr2 (43 HSPs)
chr2 (227-364)||(44854390-44854526)
chr2 (178-361)||(31782565-31782749)
chr2 (228-362)||(26269987-26270119)
chr2 (228-364)||(5282304-5282440)
chr2 (229-363)||(29771417-29771550)
chr2 (229-366)||(15135772-15135908)
chr2 (228-364)||(45261903-45262045)
chr2 (227-355)||(28178410-28178538)
chr2 (228-365)||(28012005-28012141)
chr2 (177-366)||(20552929-20553118)
chr2 (284-366)||(44854308-44854388)
chr2 (178-364)||(30486210-30486396)
chr2 (177-366)||(31438644-31438833)
chr2 (263-362)||(44331741-44331840)
chr2 (176-364)||(22068318-22068505)
chr2 (178-366)||(44587900-44588088)
chr2 (271-364)||(561613-561704)
chr2 (271-364)||(26891758-26891849)
chr2 (177-364)||(27856395-27856582)
chr2 (271-362)||(16807318-16807409)
chr2 (271-362)||(16846599-16846690)
chr2 (238-296)||(44331839-44331897)
chr2 (170-361)||(3668105-3668295)
chr2 (178-364)||(32360869-32361055)
chr2 (242-334)||(3336412-3336505)
chr2 (227-365)||(43637164-43637300)
chr2 (271-364)||(32860102-32860193)
chr2 (175-364)||(26387061-26387250)
chr2 (177-361)||(4381798-4381982)
chr2 (326-364)||(35851917-35851955)
chr2 (271-364)||(20252740-20252833)
chr2 (184-215)||(561667-561698)
chr2 (271-366)||(30834456-30834550)
chr2 (308-359)||(31782570-31782621)
chr2 (184-215)||(32361018-32361049)
chr2 (184-215)||(35851918-35851949)
chr2 (177-215)||(28277510-28277548)
chr2 (177-215)||(29293064-29293102)
chr2 (240-337)||(29999053-29999149)
chr2 (178-214)||(10164831-10164867)
chr2 (178-218)||(22887896-22887936)
chr2 (187-215)||(27856545-27856573)
chr2 (304-364)||(31390012-31390071)
[»] chr3 (51 HSPs)
chr3 (233-364)||(53163760-53163894)
chr3 (227-332)||(51665765-51665870)
chr3 (185-364)||(49893331-49893510)
chr3 (177-365)||(39074418-39074605)
chr3 (178-364)||(272220-272406)
chr3 (178-366)||(10617284-10617471)
chr3 (229-299)||(12011681-12011751)
chr3 (177-365)||(48725270-48725458)
chr3 (264-365)||(26966495-26966595)
chr3 (235-312)||(31436313-31436390)
chr3 (177-364)||(52520681-52520868)
chr3 (240-361)||(27644004-27644124)
chr3 (178-364)||(46352634-46352820)
chr3 (176-364)||(858589-858777)
chr3 (177-365)||(4168182-4168370)
chr3 (177-364)||(18014672-18014859)
chr3 (264-365)||(27994387-27994487)
chr3 (252-364)||(34300689-34300800)
chr3 (264-331)||(25743842-25743909)
chr3 (285-364)||(41304005-41304083)
chr3 (177-365)||(43786870-43787058)
chr3 (139-177)||(48225967-48226005)
chr3 (32-104)||(48226083-48226154)
chr3 (271-331)||(40614462-40614522)
chr3 (271-345)||(17752703-17752777)
chr3 (271-345)||(19054023-19054097)
chr3 (177-215)||(23516590-23516628)
chr3 (176-218)||(43269737-43269779)
chr3 (285-366)||(2119429-2119509)
chr3 (289-366)||(23925278-23925354)
chr3 (177-214)||(36545127-36545164)
chr3 (177-214)||(36563150-36563187)
chr3 (177-364)||(40362579-40362766)
chr3 (178-218)||(6842765-6842805)
chr3 (264-336)||(13898979-13899051)
chr3 (184-215)||(272226-272257)
chr3 (271-366)||(20923990-20924083)
chr3 (184-215)||(39074425-39074456)
chr3 (184-215)||(46352640-46352671)
chr3 (184-215)||(49893337-49893368)
chr3 (323-366)||(52246580-52246623)
chr3 (184-215)||(52520687-52520718)
chr3 (304-366)||(2362799-2362860)
chr3 (323-365)||(28139308-28139350)
chr3 (264-298)||(49340124-49340158)
chr3 (176-218)||(53163912-53163954)
chr3 (325-358)||(23516588-23516621)
chr3 (271-365)||(53489919-53490013)
chr3 (179-215)||(14887391-14887427)
chr3 (230-361)||(41553993-41554122)
chr3 (230-358)||(50395616-50395742)
[»] scaffold0001 (1 HSPs)
scaffold0001 (227-362)||(509039-509173)
[»] scaffold0264 (1 HSPs)
scaffold0264 (175-364)||(22961-23150)
[»] scaffold0003 (3 HSPs)
scaffold0003 (271-364)||(53780-53871)
scaffold0003 (184-215)||(53834-53865)
scaffold0003 (177-214)||(53684-53721)
[»] scaffold0034 (1 HSPs)
scaffold0034 (285-361)||(95692-95767)
[»] scaffold0190 (1 HSPs)
scaffold0190 (304-371)||(14889-14955)
[»] scaffold0021 (1 HSPs)
scaffold0021 (271-361)||(116207-116295)
[»] scaffold0206 (1 HSPs)
scaffold0206 (272-364)||(11066-11154)
[»] scaffold0188 (2 HSPs)
scaffold0188 (314-363)||(6246-6295)
scaffold0188 (177-214)||(6109-6146)
[»] scaffold0014 (1 HSPs)
scaffold0014 (323-364)||(68435-68476)
[»] scaffold0019 (1 HSPs)
scaffold0019 (264-332)||(66430-66498)
[»] scaffold0045 (1 HSPs)
scaffold0045 (304-365)||(50547-50607)
[»] scaffold0425 (1 HSPs)
scaffold0425 (178-218)||(10856-10896)


Alignment Details
Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 34706910 - 34706720
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggatt 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  34706910 ttagggtcttgctaaccggtgcccccggggcactggttaagcatacgaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggatt 34706811  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  34706810 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccggtgcccccggggcaccggttagcatttccc 34706720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 184 - 366
Target Start/End: Original strand, 34712131 - 34712314
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaaca 282  Q
    ||||||||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  34712131 tgctaaccggtgcccccggggcactagttaagcatacaaaaaatggaaattcttaccataaaaggaagttttgttgacttatttatagattaattaaaaa 34712230  T
Q  283 attttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |  || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  34712231 aaatttaatgcaataattaacatataatttccctttttattatccttaaccagtgccccggaggcaccggttagcatttcccaa 34712314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 180 - 362
Target Start/End: Complemental strand, 1128000 - 1127817
Alignment:
Q  180 gtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnnggaaa-ttcttaccataaaaggaagttttgttgacttatttatggattaatta 278  Q
    ||||| ||||||||||||| |||||||||||||||||||         |||| ||||||||||||||  |||||||||||||||||||||  ||||||||    
T  1128000 gtcttactaaccggtgccctcggggcactggttaagcatacaaaaaaagaaaattcttaccataaaaaaaagttttgttgacttatttataaattaatta 1127901  T
Q  279 aacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || |||| ||||||||||||    
T  1127900 aacaattttcaatgcaataattaacatataatttccctttttattatccttaaccggtgcccccggagcactggttagcatttc 1127817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 229 - 333
Target Start/End: Original strand, 31379418 - 31379522
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  31379418 aaattcttaccataaaaggaagttatgttgacttatttatggattaattaaacaattttaaatgcaataattaatatataatttccctttttattatcct 31379517  T
Q  329 taacc 333  Q
    |||||    
T  31379518 taacc 31379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 177 - 364
Target Start/End: Original strand, 32929507 - 32929694
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||||||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  ||||    
T  32929507 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaatta 32929606  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| ||||||| ||||||| ||||||| ||||||||||| |||| || | ||||||||| |||| ||||||||||||||||||||||||    
T  32929607 attacacaattt-caatgcattaattaatatataatttcctttttcat-acccttaaccattgccccgggggcaccggttagcatttccc 32929694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 392283 - 392095
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||||||||||||||||||||||         || |||| |||||||||||||||  | || ||||| |  ||||  ||||    
T  392283 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaatta 392184  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||||||||| |||||||||||||||||||||||||    
T  392183 attacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccca 392095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 362
Target Start/End: Complemental strand, 22021732 - 22021633
Alignment:
Q  263 atttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||||||||||| |||| |||||||||||||||||  |||||| |||  |||||| || ||||||| |||||| ||||||||||| ||| ||||||    
T  22021732 atttatggattaattacacaagtttcaatgcaataattactatataaattctttttttagtaaccttaactagtgccccgggggcaccgattaacatttc 22021633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 365
Target Start/End: Complemental strand, 2581146 - 2580951
Alignment:
Q  170 taaagttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttattta 267  Q
    |||| |||||||| ||||||||||||| ||||||| | |||||||||||         || |||| ||||||||||||||| || || |||||||  |||    
T  2581146 taaatttagggtcctgctaaccggtgctcccggggtattggttaagcataccataaaagggaattattaccataaaaggaaattatttttgactttatta 2581047  T
Q  268 tggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |  |||||||| | ||||| ||||||| ||| ||  ||||||||||| ||||||| ||| ||||||||| ||||  ||||||||||||||||||||||    
T  2581046 taaattaattacataattt-caatgcattaactactatataatttccttttttat-atcattaaccagtacctcaagggcaccggttagcatttccca 2580951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 4215882 - 4215695
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| ||||||||| |||||||||||||||||||||||||         ||||||| |||||||||||||||  | || ||||| |  ||||  ||||    
T  4215882 agggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaatta 4215783  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| |||| ||  || |||||||||||| ||||||||||||||| ||||||||    
T  4215782 attacacaattt-caatgcattaactattatataatttcctttttcatactc-ttaaccagtgccccgggggcaccggttaacatttccc 4215695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 23402325 - 23402138
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||| ||||||||| ||||||||||         || |||| ||||||||||||| || | || |||||||  ||||  ||||    
T  23402325 agggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaatta 23402226  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||  |||| |||||||||| ||||||  ||||||||| |||||||  ||||||||||||||||| ||| |||||| |||||||||||||    
T  23402225 atttcacaa-tttcaatgcattaattactatataattt-cctttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 23402138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 230 - 364
Target Start/End: Original strand, 7851212 - 7851345
Alignment:
Q  230 aattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||| |||||||||||||||  | || |||||||  ||||  |||||||| |||||||| |||||| ||||||  ||||||||| | |||| || |||||    
T  7851212 aattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttt-aatgcattaattactatataattttctttttcat-atcct 7851309  T
Q  329 taaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||||  |||||||||||||||||||||||    
T  7851310 taaccagtgccctgggggcaccggttagcatttccc 7851345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 22021789 - 22021731
Alignment:
Q  238 ccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaat 296  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||    
T  22021789 ccataaaaggaaattttgttgacttatttatgaattaattacacaagtttcaatgcaat 22021731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 365
Target Start/End: Original strand, 12145117 - 12145304
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| |||||||||||||| |||| |||||||||||||||         ||||||| ||| |||||||||||  | || |||||||  ||||  |||||    
T  12145117 gggtcctgctaaccggtgcctccggagcactggttaagcatactataaaaggaaattattatcataaaaggaaactgtttttgactttattataaattaa 12145216  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||| |||||   ||||||||||||||||||||||||    
T  12145217 ttacacaattt-caatgcattaactactatataatttcctttttcat-atccttaacaagtgcactgggggcaccggttagcatttccca 12145304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 20898039 - 20897948
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||||||||  |||||||||||||||||||||||    
T  20898039 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccctgggggcaccggttagcatttccc 20897948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 27433679 - 27433492
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||||||||||||||||||||||||| || |||||| |||         || |||| ||||||||||||| || | || ||||| |  | ||  ||||    
T  27433679 agggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaatta 27433580  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| |||||||| |||||| ||| ||  ||||||||| |||||||  || |||||||||||||| ||||||||||||||||||||||||    
T  27433579 attacacaatttt-aatgcattaactactatataattt-cctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 27433492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 361
Target Start/End: Original strand, 32985199 - 32985376
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggattaattaaac 281  Q
    |||||||||||||||||||||||||||||||||||         || |||| ||| ||||||||| || | || |||||||  ||||  |||||||| ||    
T  32985199 tgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacac 32985298  T
Q  282 aattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    || ||||||| || ||| ||  ||||||||||| |||||| |||||||||||| |||| || ||||||||||| ||||||    
T  32985299 aa-tttcaatacattaactactatataatttcctttttta-tatccttaaccaatgccccgagggcaccggtttgcattt 32985376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 2350785 - 2350654
Alignment:
Q  230 aattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||| |||||||||||||||  | || |||||||  ||||  |||||||| ||||||| |||| || ||| ||  ||||||||||| |||| || |||||    
T  2350785 aattattaccataaaaggaaactatttttgactttattataaattaattacacaattt-caatacattaactactatataatttcctttttcat-atcct 2350688  T
Q  329 taaccagtgcctcgggggcaccggttagcatttc 362  Q
    ||||||||||| |||| |||||||||||||||||    
T  2350687 taaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 3246178 - 3246270
Alignment:
Q  268 tggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    ||||||||||| |||||||| |||||||||||||   |||||||| |||||||| ||||||||| ||||||  |  |||||||||||| |||||    
T  3246178 tggattaattacacaatttttaatgcaataattactgtataattt-cctttttagtatccttaatcagtgctccaagggcaccggttaacattt 3246270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 3515857 - 3515766
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||||||||  |||||||||||||||||||||||    
T  3515857 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccctgggggcaccggttagcatttccc 3515766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 31280412 - 31280321
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| ||| || |||| |||||||||||| |||||||||||||||||||    
T  31280412 attaattatacaattt-caatgcattaactactatataatttcctttttcattctc-ttaatcagtgcctcgggagcaccggttagcatttccc 31280321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 1603996 - 1604034
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  1603996 agggtgttgctaaccggtgcccccggggcactggttaag 1604034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 18276612 - 18276800
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcat----nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggat 272  Q
    ||||| |||||||||||||||| ||||||||||||||||||            ||||||| ||||||||||||| || | || |||||||  ||||  ||    
T  18276612 gggtcctgctaaccggtgccccaggggcactggttaagcataataccataaaaggaaattattaccataaaaggaaactgtttttgactttattataaat 18276711  T
Q  273 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||| ||||  ||||||||| ||| ||  ||||||||| |||||||  ||||||||||||||||| | |||||||| |||| ||||||||    
T  18276712 taattacacaa-attcaatgcattaactactatataattt-cctttttcatatccttaaccagtgcc-caggggcaccagttaacatttccc 18276800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 21878442 - 21878534
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||||| ||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||| |||||  || |||||||||||||||||||||    
T  21878442 attaattaaataattt-caatgcattaactactatataatttcctttttcat-atccttaacccgtgcccgggaggcaccggttagcatttccca 21878534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 252407 - 252476
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacc 333  Q
    |||||| ||| |||| |||||||||||| |||||| ||| ||||||||||  |||||| |||||||||||    
T  252407 tttatgaattgattacacaattttcaatacaataactaatatataatttctatttttagtatccttaacc 252476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 34396622 - 34396713
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||| ||| |  |||||||||||||||||||||||    
T  34396622 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaacctgtgtcctgggggcaccggttagcatttccc 34396713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 392102 - 392133
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  392102 tgctaaccggtgcccccggggcactggttaag 392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 8701374 - 8701343
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  8701374 tgctaaccggtgcccccggggcactggttaag 8701343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 11115190 - 11115267
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcacc 350  Q
    |||||||| ||||||| ||||| | ||| ||  ||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  11115190 attaattacacaattt-caatgtattaactattatataatttccttttttat-atccttaaccagtgcctcggggacacc 11115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 27433498 - 27433529
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  27433498 tgctaaccggtgcccccggggcactggttaag 27433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 34706851 - 34706901
Alignment:
Q  308 aatttccctttttattatccttaaccagtgcctcgggggcaccggttagca 358  Q
    ||||||| |||||  ||| ||||||||||||| ||||||||||||||||||    
T  34706851 aatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagca 34706901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 12525799 - 12525719
Alignment:
Q  283 attttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||| | ||| ||  ||||||||||| |||| || | ||||||||||| || ||| ||||||||||||||||||||    
T  12525799 attttcaatgtattaactactatataatttcctttttcat-acccttaaccagtaccccggaggcaccggttagcatttccc 12525719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 24663200 - 24663237
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  24663200 agggtgttgctaaccggtgcccctggggcactggttaa 24663237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 4215704 - 4215732
Alignment:
Q  187 taaccggtgcccccggggcactggttaag 215  Q
    |||||||||||||||||||||||||||||    
T  4215704 taaccggtgcccccggggcactggttaag 4215732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 11634030 - 11633970
Alignment:
Q  251 ttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatt 311  Q
    |||| ||||| | |||||| |||||||| ||||||||||||||||||| ||  ||||||||    
T  11634030 tttttttgacatttttatgtattaattacacaattttcaatgcaataactactatataatt 11633970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 26467123 - 26467159
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggtta 213  Q
    |||||| |||||||||||||| |||||||||||||||    
T  26467123 agggtcatgctaaccggtgcctccggggcactggtta 26467159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 26879236 - 26879303
Alignment:
Q  266 tatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 334  Q
    |||||||| |||| |||||||||||| |||||||||  ||| ||||| |||||||| |||| |||||||    
T  26879236 tatggattgattacacaattttcaatacaataattactatacaattt-cctttttagtatcattaacca 26879303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 29451211 - 29451300
Alignment:
Q  272 ttaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||| ||||| ||| |||||| |||||||||||||    
T  29451211 ttaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccggtgcc-cggaggcaccagttagcatttccc 29451300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 1e-75; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 28725905 - 28726092
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaat 276  Q
    |||||||||||||||||| ||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28725905 gggtcttgctaaccggtgtccccggggcactggttaagcatacgaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaat 28726004  T
Q  277 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28726005 taaacaattttcaatgcaataattaacatataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttccc 28726092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 178 - 365
Target Start/End: Original strand, 38595752 - 38595940
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnnggaaa-ttcttaccataaaaggaagttttgttgacttatttatggattaat 276  Q
    ||||| |||||||||||||| ||||||||||||||||||||         |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38595752 gggtcatgctaaccggtgcctccggggcactggttaagcatgcaaaaaaagaaaattcttaccataaaaggaagttttgttgacttatttatggattaat 38595851  T
Q  277 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38595852 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgccccgggggcaccggttagcatttccca 38595940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 227 - 367
Target Start/End: Original strand, 52702195 - 52702335
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52702195 ggaaattattaccataaaatgaagtttttttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 52702294  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttcccaac 367  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  52702295 cttaaccagtgccccgggagcaccggttagcatttcccaac 52702335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 184 - 366
Target Start/End: Original strand, 30664173 - 30664355
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaagcatnnnnnnnng-gaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaaca 282  Q
    ||||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30664173 tgctaaccggtgcccacggggcactggttaagcatacaaaaaaaagaaattcttaccataaaaggaagttttgttgacttatttatagattaattaaaca 30664272  T
Q  283 attttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||| |||| |||||||||||||||||    
T  30664273 attttcaatgcaataattaacatataattttcttttttattatccttaaccaatgccccggaggca-cggttagcatttcccaa 30664355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 27457002 - 27457137
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |    
T  27457002 aaatttttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcactaattaacatataatttcactttttattatctt 27457101  T
Q  329 taaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||  |||| ||||||||||| ||||||||||||    
T  27457102 taacccttgccccgggggcaccgattagcatttccc 27457137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 10679704 - 10679510
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnng-gaaattcttaccataaaaggaagttttgttgacttattta-----t 268  Q
    |||||||| |||||||||||||||||||| |||  |||||||||          |||||| |||||||||||||||||||||||||||||||||     |    
T  10679704 ttagggtcatgctaaccggtgcccccgggacacctgttaagcatacaaaaaaaagaaatttttaccataaaaggaagttttgttgacttatttaatttat 10679605  T
Q  269 ggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||    
T  10679604 agattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc-taaccagtgccccgggagcaccggttaacatttccc 10679510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 5694508 - 5694320
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| ||||||||||||||||||| |||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  ||||    
T  5694508 agggtcctgctaaccggtgcccccggagcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatta 5694409  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  5694408 attacacaattt-caatgcattaactactatataatttccctttttat-atccttaaccagtgccccggaggcaccggttagcatttccca 5694320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 15227926 - 15227739
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    ||||||||||||||||||||| ||||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  ||||    
T  15227926 agggtcttgctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatta 15227827  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| ||||||| ||||||| ||||||  ||||||||||| |||| || |||||||||||||||| | |||| |||||||||||||||||    
T  15227826 attacacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgcccccggggtaccggttagcatttccc 15227739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 29657958 - 29657771
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| ||||||||||||||||| |||||||||||||||||         || |||| |||||| ||||||||  | || |||||||  ||||  ||||    
T  29657958 agggtcctgctaaccggtgcccccagggcactggttaagcataccataaaagggaattattaccaaaaaaggaaactgtttttgactttattatcaatta 29657859  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  29657858 attatacaattt-caatgcattaactactatataatttccttttttat-atccttaaccagtgccccgggggcaccggttagcatttccc 29657771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 365
Target Start/End: Original strand, 24178470 - 24178650
Alignment:
Q  185 gctaaccggtgcccccggggcactggttaagcatnnnnnnnng-gaaattcttaccataaaaggaagttt-tgttgacttatttatggattaattaaaca 282  Q
    ||||||||||||||||||||||||||||||||||          |||||| |||||||||||||||  |  | |||||||  |||| ||||||||| |||    
T  24178470 gctaaccggtgcccccggggcactggttaagcataccataaaatgaaattattaccataaaaggaaactgcttttgactttattatagattaattacaca 24178569  T
Q  283 attttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| |||||||| ||||||||||||||||    
T  24178570 attt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgccccgggggcatcggttagcatttccca 24178650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 37350222 - 37350117
Alignment:
Q  256 ttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggtta 355  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||   |||||| ||||||||| ||||||| || |  |||||||||    
T  37350222 ttgacttatttatggattaattacacaattttcaatgcaacaattaccatataattt-attttttaatatccttaatcagtgccccgagaacaccggtta 37350124  T
Q  356 gcatttc 362  Q
    | |||||    
T  37350123 gtatttc 37350117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 364
Target Start/End: Original strand, 14350278 - 14350463
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnnggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    |||||| |||||||||||||||| ||||||||||||||||||        || |||| ||||||||||||||| || || ||||| |  ||||  |||||    
T  14350278 agggtcctgctaaccggtgcccc-ggggcactggttaagcataccattaagggaattattaccataaaaggaaattgtttttgacattattataaattaa 14350376  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| |||||||| |||||| ||| ||  ||||||||||| |||| || | |||||||| ||||  ||||||||||||||||||||||||    
T  14350377 ttacacaatttt-aatgcattaactacaatataatttcctttttcat-acccttaaccggtgctccgggggcaccggttagcatttccc 14350463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 17333362 - 17333468
Alignment:
Q  256 ttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggtta 355  Q
    |||||||  ||||| |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| |||||||||||||||    
T  17333362 ttgactttattatgaattaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgcc-cgggggcaccggtta 17333458  T
Q  356 gcatttccca 365  Q
    ||||||||||    
T  17333459 gcatttccca 17333468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 18043349 - 18043162
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||||||||||||||||||||||          | |||| |||||||||||| ||  | || ||||| |  ||||  ||||    
T  18043349 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaagaaaactgtttttgacattattataaatta 18043250  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| | |||||||||||||| ||| ||||||||||||||||||||    
T  18043249 attacacaattt-caatgcattaactactatataatttccttttttat-acccttaaccagtgccccggaggcaccggttagcatttccc 18043162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 230 - 364
Target Start/End: Original strand, 9266781 - 9266914
Alignment:
Q  230 aattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||| |||||||||||||||  | || |||||||  ||||| |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||    
T  9266781 aattattaccataaaaggaaactgtttttgactttattatgaattaattacacaattt-caatgcattaaatactatataatttcctttttcat-atcct 9266878  T
Q  329 taaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||| ||||| ||||||||| ||||||||    
T  9266879 taaccagtgccgcggggacaccggttaacatttccc 9266914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 29683274 - 29683195
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||| ||| ||  ||||||||||| |||||  |||| |||||||||||| ||||||||||||||||||||||||    
T  29683274 tttcaatgcattaactactatataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttccc 29683195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 33644397 - 33644480
Alignment:
Q  239 cataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttat 322  Q
    |||||||||||  |||| |||| |||||||| |||||||| ||||||||||||||||||||||  ||||||||| | |||||||    
T  33644397 cataaaaggaaactttgatgacatatttatgaattaattacacaattttcaatgcaataattattatataattttcttttttat 33644480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 23822523 - 23822608
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnnggaaattcttaccataaaaggaagttttgttgacttat 264  Q
    ||||| ||||||||||||||||||||||| |||||||||||          ||||||||||||||||||||||||||||||||||||    
T  23822523 gggtcatgctaaccggtgcccccggggcattggttaagcatacaaaaaaa-aaattcttaccataaaaggaagttttgttgacttat 23822608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 29210601 - 29210540
Alignment:
Q  157 aaaaatatggatttaaagttagggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||||||||||| |   |||||||| |||||||||||||||||||||||||||||||||||    
T  29210601 aaaaatatggattaatttttagggtcctgctaaccggtgcccccggggcactggttaagcat 29210540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 364
Target Start/End: Original strand, 51065747 - 51065934
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||| ||||||||||||||||||         || |||| ||||||||||||| || | || |||||||  ||||  ||||    
T  51065747 agggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaatta 51065846  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| |||| ||||||| || ||| ||  |||||||||  ||||||  ||||||||||||||| | ||||| ||||||||||||||||||    
T  51065847 attacacaa-tttcaatacattaactactatataattt-actttttcatatccttaaccagtgtcccggggacaccggttagcatttccc 51065934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 366
Target Start/End: Original strand, 3784711 - 3784901
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatt 273  Q
    |||||||  ||||||||||||||||||| ||| ||||||||||         ||||||| |||||||||||| || || || |||||||  ||||  |||    
T  3784711 tagggtccggctaaccggtgcccccgggacacgggttaagcataccataaaaggaaattattaccataaaagaaaattgtttttgactttattatcaatt 3784810  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||   |||||||||| || |||||||||||    
T  3784811 aattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgcactgggggcaccgatttgcatttcccaa 3784901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 361
Target Start/End: Original strand, 12072068 - 12072245
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaag-gaagttttgttgacttatttatggattaattaaac 281  Q
    |||||||||||||||||||||||||||||||||||          | |||| ||||||||||||  || | || |||||||  ||||  |||||||| ||    
T  12072068 tgctaaccggtgcccccggggcactggttaagcataccataaaaaggaattattaccataaaagaaaactgtttttgactttattatcaattaattacac 12072167  T
Q  282 aattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    || |||||||||| ||| ||  | ||||||| |||||||  ||||||||||| ||||| |||||||||||||||||||||    
T  12072168 aa-tttcaatgcattaactactacataattt-cctttttcatatccttaaccggtgccccgggggcaccggttagcattt 12072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 364
Target Start/End: Original strand, 42769996 - 42770176
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaac 281  Q
    |||||||||||||||||||||||||||||||||||          | |||| |||||||||||||||  | || ||||  |  ||||  |||||||| ||    
T  42769996 tgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacac 42770095  T
Q  282 aattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||| ||||||| ||| ||  ||||||||||| |||| || | | |||||||||||| ||||||||||||||||||||||||    
T  42770096 aattt-caatgcattaactactatataatttcctttttcat-accattaaccagtgccccgggggcaccggttagcatttccc 42770176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 29210504 - 29210413
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||||||||| ||| ||||||||||||||||||||    
T  29210504 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccggaggcaccggttagcatttccc 29210413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 365
Target Start/End: Complemental strand, 38163035 - 38162849
Alignment:
Q  179 ggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggattaat 276  Q
    |||| |||||||||||||||||||||||| ||||||||||         || |||| ||||||||||||| || | || ||||| |  ||||  ||||||    
T  38163035 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaat 38162936  T
Q  277 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    || |||| |||||||||| ||| ||  |||||||||  ||||||  || |||||||||||||| ||| ||||||||||| |||||||||    
T  38162935 tacacaa-tttcaatgcattaactactatataattt-tctttttcatacccttaaccagtgccccggaggcaccggttaacatttccca 38162849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 264
Target Start/End: Original strand, 23789547 - 23789582
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttat 264  Q
    ||||||||||||||||||||||||||||||||||||    
T  23789547 aaattcttaccataaaaggaagttttgttgacttat 23789582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 36446420 - 36446508
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| || |||||||||||||||||||||||| |||| ||||||    
T  36446420 attaattacacaattt-caatgcattaactactatataatttcc-tttttat-attcttaaccagtgcctcgggggcaccagttaacatttc 36446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 13961302 - 13961212
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  |||||||||   |||||  ||||||||||| ||||| ||||||||||||||||||||||||    
T  13961302 attaattacacaattt-caatgcattaactactatataatttt--ttttttatatccttaacccgtgccccgggggcaccggttagcatttccc 13961212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 48282858 - 48282896
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  48282858 agggtcttgttaaccggtgcccccggggcactggttaag 48282896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 38701936 - 38701977
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  38701936 agggtcctgctaaccggtgccctcggggcactggttaagcat 38701977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 9413973 - 9414062
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||| ||| |||||||| |||||||||   |||||||| | |||||| |||| ||||||| |||| ||||| ||||||||||||||||    
T  9413973 attaattacacagttttcaattcaataattactgtataattttc-tttttaatatctttaaccaatgccccgggg-caccggttagcatttc 9414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 21112678 - 21112721
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||    
T  21112678 ttagggtcctgctaaccggtgccctcggggcactagttaagcat 21112721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 28726086 - 28726055
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  28726086 tgctaaccggtgcccccggggcactggttaag 28726055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 29657777 - 29657808
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  29657777 tgctaaccggtgcccccggggcactggttaag 29657808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 30294476 - 30294569
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| |||  ||||| ||||| ||||||||||||||    
T  30294476 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccaatgctccggggacaccgattagcatttcccaa 30294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 38595933 - 38595902
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  38595933 tgctaaccggtgcccccggggcactggttaag 38595902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 39912387 - 39912465
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||| ||| ||  |||||||||||||||||| ||||||||| ||||||| || | || ||||||| ||||||||    
T  39912387 tttcaatgcattaactagtatataatttcccttttta-tatccttaatcagtgccccgagtgcgccggttaacatttccc 39912465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 19940547 - 19940585
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    |||||| || |||||||||||||||||||||||||||||    
T  19940547 agggtcatgttaaccggtgcccccggggcactggttaag 19940585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 214
Target Start/End: Original strand, 29683201 - 29683231
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaa 214  Q
    |||||||||||||||||||||||||||||||    
T  29683201 tgctaaccggtgcccccggggcactggttaa 29683231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 214
Target Start/End: Complemental strand, 42770170 - 42770140
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaa 214  Q
    |||||||||||||||||||||||||||||||    
T  42770170 tgctaaccggtgcccccggggcactggttaa 42770140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 45844424 - 45844458
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataa 298  Q
    ||||||||||||||||||||||||||||| |||||    
T  45844424 tttatggattaattaaacaattttcaatgtaataa 45844458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 19940598 - 19940557
Alignment:
Q  314 cctttttattatccttaaccagtgcctcgggggcaccggtta 355  Q
    |||||||| | ||||||||||||||| |||||||||||||||    
T  19940598 cctttttagtttccttaaccagtgccccgggggcaccggtta 19940557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 35985716 - 35985806
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||||| ||||||||| |||||  || ||||||||||||| ||||||||    
T  35985716 attaattacacaattt-caatgcattaactactatataatttcctttttta-tatccttaaacagtg-atccggggcaccggttaacatttccc 35985806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 38702041 - 38702117
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||||| ||| ||  ||||| ||||| |||| || | |||||||||||||| |||| |||||||||||||||||    
T  38702041 tttcaatgcattaactactatatagtttcctttttcat-acccttaaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 47010180 - 47010139
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  47010180 agggtcctgctaaccggtgcccctggagcactggttaagcat 47010139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 361
Target Start/End: Original strand, 48383257 - 48383294
Alignment:
Q  324 atccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  48383257 atccttaaccagtgccccgggagcaccggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 19940683 - 19940719
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  19940683 tccttaaccagtgccccgggggcaccggttaacattt 19940719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 215
Target Start/End: Complemental strand, 19940713 - 19940685
Alignment:
Q  187 taaccggtgcccccggggcactggttaag 215  Q
    |||||||||||||||||||||||||||||    
T  19940713 taaccggtgcccccggggcactggttaag 19940685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 184 - 364
Target Start/End: Original strand, 14214055 - 14214236
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaaca 282  Q
    |||||||||||||||||||| ||| ||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14214055 tgctaaccggtgcccccgggacaccggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaaca 14214154  T
Q  283 attttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  14214155 attttcaatgcaataattaacatataatttccctttttattatccttaacctgtgcctcgggagcaccggttaacatttccc 14214236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 227 - 366
Target Start/End: Original strand, 40608586 - 40608724
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40608586 ggaaattcttaccataaaaggaagttttgttgatttatt-atggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 40608684  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||||||||||| | |||| |||||||||||||||||||||    
T  40608685 cttaaccagtgtcccgggagcaccggttagcatttcccaa 40608724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 31467906 - 31467744
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaat 276  Q
    |||||||||||||||||| ||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31467906 gggtcttgctaaccggtgtccctggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatagattaat 31467807  T
Q  277 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcc 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31467806 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccggtgcc 31467744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 21944912 - 21945047
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  21944912 aaatttttaccataaaaggaagttttgttgacttatttatggattaattaaacaatttttaatgcaataattaatatataattttcctttttattatcct 21945011  T
Q  329 taaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||| ||| ||||||||||||||||||||    
T  21945012 taaccagtgccccggaggcaccggttagcatttccc 21945047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 228 - 365
Target Start/End: Complemental strand, 39234966 - 39234830
Alignment:
Q  228 gaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 327  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39234966 gaaattcttaccataaaaggaagttttgttgatttatttatggattaattaaacaattgtcaatgcaataattaacatataatttccctttttattatcc 39234867  T
Q  328 ttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||| ||||| | || ||||||||||||||||||||    
T  39234866 ttaacccgtgcc-ccggagcaccggttagcatttccca 39234830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 1383324 - 1383457
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1383324 ggaaattcttaccataaaaggaagttttgttgacttttttatggattaattaaacaattttcaatgcaataattaacatataatttcccttcttattatc 1383423  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||||| |  | ||| ||||||||||||||||    
T  1383424 cttaaccagtac--ccgggacaccggttagcatttc 1383457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 227 - 364
Target Start/End: Complemental strand, 16972313 - 16972176
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||    
T  16972313 ggaaattattatcataaaaggaagttttgttgacttatttatggattaattaaataatttttaatgcaataattaacatataatttttctttttattatc 16972214  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||  |||||||| |||||||||||||||    
T  16972213 cttaaccagtgctccgggggcatcggttagcatttccc 16972176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 227 - 336
Target Start/End: Original strand, 30889480 - 30889589
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  30889480 ggaaatttttatcataaaaggaagttttgttgacttatttatagattaattaaataattttcaattcaataattaacatataatttccctttttattatc 30889579  T
Q  327 cttaaccagt 336  Q
    ||||||||||    
T  30889580 cttaaccagt 30889589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 228 - 365
Target Start/End: Original strand, 32188042 - 32188177
Alignment:
Q  228 gaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 327  Q
    |||||| ||| |||||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  32188042 gaaatttttatcataaaag-aagttttgttaacttatttataaattaattaaacaattttcaatgcaataattaacatataatttttctttttattat-c 32188139  T
Q  328 ttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  32188140 ttaaccagtgcctcggaggcatcggttagcatttccca 32188177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 14349688 - 14349592
Alignment:
Q  235 ttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaa 331  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  14349688 ttaccataaaaagaaattttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttatctttttattatccttaa 14349592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 366
Target Start/End: Original strand, 34650830 - 34651020
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggat 272  Q
    |||||||| |||||||||||||||||||||||||||||||||||         || |||| ||||||||||||| || | || ||||| |  ||||  ||    
T  34650830 ttagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaat 34650929  T
Q  273 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||| |||| |||||||||| ||| ||  ||||||||| |||||||  || |||||||||||||| ||||||||||||||||||||||||||    
T  34650930 taattacacaa-tttcaatgcattaactactatataattt-cctttttcatacccttaaccagtgcc-cgggggcaccggttagcatttcccaa 34651020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 366
Target Start/End: Original strand, 11957966 - 11958155
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||| ||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  ||||    
T  11957966 agggtcctgctaaccggtgcccctggggcactggttaagcatgccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatta 11958065  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||| ||||||| || |||| ||| ||  ||||||||||| ||||||| ||| |||||| ||||| ||||||||||||||||||||||||||    
T  11958066 attacacaattt-cattgcattaactactatataatttccttttttat-atctttaacctgtgccccgggggcaccggttagcatttcccaa 11958155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 364
Target Start/End: Original strand, 10054406 - 10054538
Alignment:
Q  230 aattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcctt 329  Q
    |||| |||||||||||||||  | | ||||| |  ||||  |||||||| ||||||| ||||||| ||||||  ||||||||||| |||| || | ||||    
T  10054406 aattattaccataaaaggaaactgttttgacattattataaattaattacacaattt-caatgcattaattattatataatttcctttttcat-accctt 10054503  T
Q  330 aaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||| ||||||||||||||||||||||||    
T  10054504 aaccagtgccccgggggcaccggttagcatttccc 10054538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 365
Target Start/End: Complemental strand, 10070060 - 10069968
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| |||||||||||||||||||||||||    
T  10070060 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcatttccca 10069968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 364
Target Start/End: Complemental strand, 13661996 - 13661808
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagttttgt-tgacttatttatggatt 273  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||         || |||| |||||||||||||||  | | | ||||||  ||||  |||    
T  13661996 tagggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagagaattattaccataaaaggaaactgtttctgactttattatcaatt 13661897  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||  ||||||||||||||||||||||||    
T  13661896 aattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgctccgggggcaccggttagcatttccc 13661808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 35132708 - 35132522
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| ||||||||||||||||||||||| |||||||||||         || |||| ||||||||||   || | || |||||||  ||||  |||||    
T  35132708 agggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattaccataaagaaaactgtttttgactttattataaattaa 35132609  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||||| ||||| | ||| ||  ||||||||||| |||| || |||||||||||||| | ||||||||||||||||||||||||    
T  35132608 ttacacaattt-caatgtattaactactatataatttcctttttcat-atccttaaccagtgtcccgggggcaccggttagcatttccc 35132522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 6042135 - 6042209
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcc 339  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||   |||||| |||| ||||||||||||    
T  6042135 tttatggattaattacacaattttcaatgcaataattactatataattt-tttttttagtatctttaaccagtgcc 6042209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 35504335 - 35504428
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||||||| | ||||||||||||||||||||||||||    
T  35504335 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgtcccgggggcaccggttagcatttcccaa 35504428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 365
Target Start/End: Complemental strand, 6283695 - 6283561
Alignment:
Q  230 aattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||| |||||||||||| || || || |||||||  ||||  |||||||| ||||||| ||||||| ||||||  ||||||||| | |||| || ||| |    
T  6283695 aattattaccataaaagaaaattgtttttgactttattataaattaattacacaattt-caatgcattaattattatataattttctttttcat-atctt 6283598  T
Q  329 taaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||| |||||| ||| |||||||||||||||||||||    
T  6283597 taactagtgccccggaggcaccggttagcatttccca 6283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 367
Target Start/End: Original strand, 21547489 - 21547582
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaac 367  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| ||||||||||  |||| ||||| |||||||||||||||||||||    
T  21547489 attaattacacaattt-caatgcattaactactatataatttccttttttat-atccttaaccgatgcc-cggggacaccggttagcatttcccaac 21547582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 1919664 - 1919622
Alignment:
Q  173 agttagggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    |||| |||| |||||||||||||||||||||||||||||||||    
T  1919664 agtttgggtgttgctaaccggtgcccccggggcactggttaag 1919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 8787526 - 8787485
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  8787526 agggtcctgctaaccggtgcccccggggcacaggttaagcat 8787485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 1069610 - 1069658
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataattt 312  Q
    ||||||||| |||||||||||||||||| |||||||||  |||||||||    
T  1069610 tttatggatcaattaaacaattttcaatacaataattattatataattt 1069658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 10054532 - 10054501
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  10054532 tgctaaccggtgcccccggggcactggttaag 10054501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 10069975 - 10070006
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  10069975 tgctaaccggtgcccccggggcactggttaag 10070006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 5091937 - 5091899
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  5091937 agggtcttgttaaccggtgcccccggggcacaggttaag 5091899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 8927555 - 8927593
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  8927555 agggtcctgctaaccggtgcccctggggcactggttaag 8927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 9721702 - 9721794
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||||||||||| ||||||| ||||||  ||||||||| |||||||  ||| ||||||||||  | || || ||||||||| |||||||||    
T  9721702 attaattaaacaattt-caatgcattaattactatataattt-cctttttcatattcttaaccagtagcccgaggacaccggttaacatttccca 9721794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 19647753 - 19647841
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| ||| |  ||||||||||||||    
T  19647753 attaattatacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccccggagataccggttagcattt 19647841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 1919620 - 1919653
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagca 358  Q
    ||||||||||||||| ||||||||||||||||||    
T  1919620 tccttaaccagtgccccgggggcaccggttagca 1919653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 4837348 - 4837258
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||||||  ||||||||| |||||||  ||| ||||||| ||||| | ||||||||||||| ||||||||    
T  4837348 attaattacacaattt-caatgcattaattactatataattt-cctttttcatattcttaaccggtgcc-ccggggcaccggttaacatttccc 4837258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 8787430 - 8787339
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||  |||| || | ||||||||| |||| ||||| ||||||||||||||||||    
T  8787430 attaattacacaattt-caatgcattaactactatataatttcatttttcat-acccttaaccaatgccccggggacaccggttagcatttccc 8787339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 19647684 - 19647717
Alignment:
Q  185 gctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||||||||||||||||||||| ||||||||||    
T  19647684 gctaaccggtgcccccggggcacgggttaagcat 19647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 5302365 - 5302437
Alignment:
Q  262 tatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 334  Q
    ||||||| ||||||||| |||||||||||| |||||| ||  ||||||||||  |||||| |||  |||||||    
T  5302365 tatttatagattaattacacaattttcaatacaataactattatataatttctttttttaatatttttaacca 5302437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 363
Target Start/End: Complemental strand, 20175318 - 20175228
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||  ||||||| ||  |||||||||| ||||| | |||||||||||||||||    
T  20175318 attaattacacaattt-caatgcattaactactatataatttctttttttat-atttttaaccagtgtctcggagacaccggttagcatttcc 20175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 20983517 - 20983557
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    |||||||  ||||||||||||||||||||||||||| ||||    
T  20983517 ttagggtaatgctaaccggtgcccccggggcactggataag 20983557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 29571619 - 29571571
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataattt 312  Q
    |||||| ||| |||| ||||||||||||||||||| ||| |||||||||    
T  29571619 tttatgaattgattatacaattttcaatgcaataaataatatataattt 29571571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 5e-66; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 6097523 - 6097336
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaat 276  Q
    ||||| |||||||| ||||| ||||||||| ||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6097523 gggtcatgctaaccagtgcctccggggcacgggttaagcatataaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaat 6097424  T
Q  277 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  6097423 taaataattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgccccgggggcatcggttagcatttccc 6097336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 227 - 364
Target Start/End: Complemental strand, 32805675 - 32805538
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32805675 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaatttttaatgcaataattaacatataatttccctttttattatc 32805576  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||| ||||  ||||||||||||||||||    
T  32805575 cttaaccagtgccccgggaacaccggttagcatttccc 32805538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 177 - 362
Target Start/End: Complemental strand, 19434680 - 19434495
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnnggaaa-ttcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| |||| ||||||||||||||| ||||||||||||||         |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19434680 agggtcatgctgaccggtgcccccggg-cactggttaagcatacaaaaaaagaaaattcttaccataaaaggaagttttgttgacttatttatggattaa 19434582  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||    
T  19434581 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaatcagtgccccggaggcaccggttaacatttc 19434495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 30924040 - 30924174
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30924040 ggaaattcttaccataaaaggaagttttgttgacttatttatgaattaattaaacaattttcaatgcactaattaacatataatttccctttttattatc 30924139  T
Q  327 cttaaccagtgcctcgggggcaccggttagcattt 361  Q
    ||||||| ||||| |||||||||||||||||||||    
T  30924140 cttaacccgtgccccgggggcaccggttagcattt 30924174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 169 - 364
Target Start/End: Original strand, 34556883 - 34557076
Alignment:
Q  169 ttaaagttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttattta 267  Q
    ||||| |||||||| ||||||||||||||||  |||||||||||||||||         ||||||||||||| |||||| ||||||||||||||||||||    
T  34556883 ttaaaattagggtcatgctaaccggtgcccc--gggcactggttaagcatacaaaaaaaggaaattcttaccctaaaagaaagttttgttgacttattta 34556980  T
Q  268 tggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| |||||||||||||    
T  34556981 tggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgcc-ccggggcaccagttagcatttccc 34557076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 38128479 - 38128290
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| |||||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38128479 agggtcatgctaaccggtgcctccggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatagattaa 38128380  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||||| ||| | |||||||    
T  38128379 ttaaacaattttcaatgcaataattaacatataattttcctttttattatccttaaccggtgtcccgggggcaccgattaacctttccca 38128290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 227 - 364
Target Start/End: Complemental strand, 20402526 - 20402389
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20402526 ggaaattcttactataaaaggaagttttgttgacttatttatggattaattaaataattttcaatgcaataattaacatataatttccctttttattatc 20402427  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| || | ||||| ||||||||||||||||||    
T  20402426 cttaaccaatgtcccggggacaccggttagcatttccc 20402389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 13106364 - 13106502
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttatta-t 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  13106364 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacaaataatttccctttttattatt 13106463  T
Q  326 ccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    | |||||||||||| || ||||||||||||||||||||||    
T  13106464 ctttaaccagtgcc-cgagggcaccggttagcatttccca 13106502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 45842844 - 45842959
Alignment:
Q  248 aagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggc 347  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| | |||||||||||| ||||||||||| |  | ||    
T  45842844 aagttttgttgacttatttatgaattaattaaataatttttaatgcaataattaacatataattttcttttttattatccctaaccagtgcc-ccagagc 45842942  T
Q  348 accggttagcatttccc 364  Q
    |||||||||||||||||    
T  45842943 accggttagcatttccc 45842959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 34333470 - 34333284
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnng-gaaattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| |||||||||||||||||||||||| |||||| |||          | |||| |||||||||||||||  | | ||||| |  ||||  |||||    
T  34333470 agggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgttttgacattattataaattaa 34333371  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||||| ||||||| ||||||  ||||||||||| |||| || | |||||||||||||| ||||||||||||||||||||||||    
T  34333370 ttacacaattt-caatgcattaattactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccc 34333284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 18486052 - 18485961
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| |||| || ||||||  ||||||||||| |||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  18486052 attaattacacaattt-caatacattaattactatataatttcc-ttttcaatatccttaaccagtgccccgggggcaccggttagcatttccc 18485961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 24798403 - 24798588
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| ||||||| |||||||||||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  |||||    
T  24798403 gggtcctgctaactggtgcccccggggcactggttaagcatactataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 24798502  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||| ||| |||||| ||||||||||||||||||||||||    
T  24798503 ttacacaattt-caatgcattaactactatataatttcctttttcat-atcctcaacaagtgcc-cgggggcaccggttagcatttccc 24798588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 366
Target Start/End: Complemental strand, 24438663 - 24438475
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggattaa 275  Q
    ||||| |||||||||||||||||||||||||||||||||||         || |||| ||||||||||||| || | || ||||| |  ||||  |||||    
T  24438663 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaa 24438564  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||| | || |||||||||| ||| ||  ||||| ||| |||||||  || ||||||| |||||| ||||||||||||||||||||||||||    
T  24438563 ttacataa-tttcaatgcattaactactatatagttt-cctttttcatacccttaactagtgccccgggggcaccggttagcatttcccaa 24438475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 364
Target Start/End: Complemental strand, 34606449 - 34606261
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttt-tgttgacttatttatggatt 273  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||         || |||| |||||||||||||||  |  | |||||||  ||||  |||    
T  34606449 tagggtcctgctaaccggtgctcccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgcttttgactttattataaatt 34606350  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||  ||||||| ||||||| ||||||  ||||||||||| |||| || |||||||||||||||| ||| |||||| |||||||||||||    
T  34606349 aatttcacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgccccggaggcaccagttagcatttccc 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 29993487 - 29993673
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttt-tgttgacttatttatggattaa 275  Q
    ||||| ||||||||| |||| ||||| ||||||||||||||         || |||| ||||||||||||||| ||  | |||||||  ||||  |||||    
T  29993487 gggtcctgctaaccgatgcctccgggacactggttaagcataccataaaagggaattattaccataaaaggaaattgattttgactttattataaattaa 29993586  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||| ||||| |||||||||| |||||||||||||    
T  29993587 ttacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccggtgccccgggggcacccgttagcatttccc 29993673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 43594131 - 43594223
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| ||||||||||||||   ||||| |||||||||||||||||||    
T  43594131 attaattatacaattt-caatgcattaactattatataatttccttttttat-atccttaaccagtgttccggggacaccggttagcatttccca 43594223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 12218531 - 12218622
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || || |||| |||||||| ||||||||||||||||||||||||    
T  12218531 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atacttatccagtgccccgggggcaccggttagcatttccc 12218622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 364
Target Start/End: Original strand, 34435744 - 34435840
Alignment:
Q  267 atggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||| |||| |||||||| |||||||||| ||  ||||||||||| |||||| |||||| |||||||  || |||| ||| ||||||||||||||    
T  34435744 atggattgattacacaatttttaatgcaataactattatataatttccttttttagtatcctgaaccagt-tcttggggacactggttagcatttccc 34435840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 34546409 - 34546500
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||| || ||||||||||| |||||||||||||||    
T  34546409 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccggtacctcgggggcatcggttagcatttccc 34546500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 4628657 - 4628566
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||||||||| ||||| | ||| ||  ||||||||||| |||| || |||||||||| ||||| | |||||| |||||||||||||||    
T  4628657 attaattaaacaattt-caatgtattaactactatataatttcctttttcat-atccttaaccggtgccccaggggcatcggttagcatttccc 4628566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 366
Target Start/End: Complemental strand, 30703728 - 30703687
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  30703728 tccttaaccagtgccccgggggcaccggttaacatttcccaa 30703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 31320420 - 31320383
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    |||| |||||||||||||||||||||||||||||||||    
T  31320420 gggtgttgctaaccggtgcccccggggcactggttaag 31320383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 35791690 - 35791653
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    |||| |||||||||||||||||||||||||||||||||    
T  35791690 gggtgttgctaaccggtgcccccggggcactggttaag 35791653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 37631637 - 37631728
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| | |||||| |||||| ||||||  ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||| ||||||||    
T  37631637 attaattacataatttt-aatgcattaattattatataatttccttttttat-atccttaacccgtgccccggaagcaccggttaacatttccc 37631728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 363
Target Start/End: Complemental strand, 47657071 - 47656981
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    |||||||| ||||||| ||||||| ||||||  ||||||||| | |||| || |||||||||||||||| | |  ||||||||||||||||||    
T  47657071 attaattacacaattt-caatgcattaattactatataattttctttttcat-atccttaaccagtgcccccgaagcaccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 18485967 - 18485998
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  18485967 tgctaaccggtgcccccggggcactggttaag 18485998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 28587968 - 28587911
Alignment:
Q  304 atataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    ||||||||||| |||| || |||||||||||||| | |||||||||||||||||||||||    
T  28587968 atataatttcctttttcat-atccttaaccagtgtc-cgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 34333290 - 34333321
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  34333290 tgctaaccggtgcccccggggcactggttaag 34333321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 36786088 - 36786057
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  36786088 tgctaaccggtgcccccggggcactggttaag 36786057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 41468719 - 41468774
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttt 319  Q
    |||| |||||||||| ||||||||||||| ||||||||  ||||||||||| ||||    
T  41468719 tttaaggattaattacacaattttcaatgtaataattactatataatttccttttt 41468774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 8754680 - 8754772
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||  |||| || |||||||||||||||  |  ||||||||||||||||||||||    
T  8754680 attaattacacaattt-caatgcattaactactatataatttcatttttcat-atccttaaccagtgctcccagggcaccggttagcatttccca 8754772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 18470066 - 18470127
Alignment:
Q  304 atataatttccctttttattatccttaaccagtgcctc-gggggcaccggttagcatttccca 365  Q
    ||||||||||| |||||| ||| ||||||| ||||| | ||||||||||||||||||||||||    
T  18470066 atataatttcc-tttttagtatgcttaaccggtgcccccgggggcaccggttagcatttccca 18470127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 366
Target Start/End: Complemental strand, 1737058 - 1736978
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||||| ||| ||  ||||||||||  |||| || |||||||||||||||| | |  |||||||||||||||||||||    
T  1737058 tttcaatgcattaactattatataatttcatttttcat-atccttaaccagtgccccagaagcaccggttagcatttcccaa 1736978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 301
Target Start/End: Original strand, 4088488 - 4088525
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataatta 301  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  4088488 tttatagattaattatacaattttcaatgcaataatta 4088525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 5239376 - 5239285
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | | |||||||||||  ||| ||||||||||||||||||||    
T  5239376 attaattacacaattt-caatgcattaactactatataatttcctttttcat-accattaaccagtgctccggaggcaccggttagcatttccc 5239285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 27456258 - 27456298
Alignment:
Q  323 tatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  27456258 tatccttaaccagtgcc-cgggggcaccagttagcatttccc 27456298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 31320381 - 31320414
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagca 358  Q
    ||||||||||||||| ||||||||||||||||||    
T  31320381 tccttaaccagtgccccgggggcaccggttagca 31320414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 35791651 - 35791684
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagca 358  Q
    ||||||||||||||| ||||||||||||||||||    
T  35791651 tccttaaccagtgccccgggggcaccggttagca 35791684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 30703698 - 30703726
Alignment:
Q  187 taaccggtgcccccggggcactggttaag 215  Q
    |||||||||||||||||||||||||||||    
T  30703698 taaccggtgcccccggggcactggttaag 30703726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 36785521 - 36785481
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||||| |||||||||||| ||||||| ||||    
T  36785521 tccttaaccagtgccccgggggcaccggatagcattgccca 36785481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 38022579 - 38022647
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaac 332  Q
    ||||| ||||||||| |||||||||||| |||||| ||  ||||||||| | || ||| ||||||||||    
T  38022579 tttatagattaattatacaattttcaatacaataactactatataattttctttattagtatccttaac 38022647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 366
Target Start/End: Original strand, 47118100 - 47118152
Alignment:
Q  314 cctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||  |||| |||||||||||| ||| |||||| |||||||||||||||    
T  47118100 cctttttcatatctttaaccagtgccccggaggcaccagttagcatttcccaa 47118152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 5e-66; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 179 - 361
Target Start/End: Original strand, 16572488 - 16572671
Alignment:
Q  179 ggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaatt 277  Q
    |||| |||||||||||||||||||||||||| ||||| ||         ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16572488 ggtcatgctaaccggtgcccccggggcactgattaagtatacaaaaaaaggaaattcttaccataaaaagaagttttgttgacttatttatggattaatt 16572587  T
Q  278 aaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  16572588 aaacaattttcaatgcaataattaacatataatttctctttttattatccttaaccagtgcctcggaggcaccggttagcattt 16572671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 168 - 355
Target Start/End: Original strand, 28119896 - 28120084
Alignment:
Q  168 tttaaagttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttattt 266  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  28119896 tttaaagttagggtcatgctaaccggtgtctccggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttattt 28119995  T
Q  267 atggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggtta 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||| |||||    
T  28119996 atggattaattaaacaattttcaatgcaataattaacatataatttctctttttattatccttaaccggtgcccccggggcacaggtta 28120084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 184 - 364
Target Start/End: Complemental strand, 292295 - 292114
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaaca 282  Q
    |||||||||||||| ||||||||| ||||||||||         ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  292295 tgctaaccggtgcctccggggcacgggttaagcatgcaaaaaaaggaaatttttaccataaaaggaagtttggttgacttatttatggattaattaaaca 292196  T
Q  283 attttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  292195 attttcaatgcaataattaacatataatttttctttttattatccttaaccggtgcccccggggcaccggttagcatttccc 292114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 176 - 364
Target Start/End: Original strand, 37402757 - 37402939
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnnggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    ||||||| ||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37402757 tagggtcatgctaaccggtgccctcggggcactggttaagcatacaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 37402856  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||      |||||||||||||||||||||||||||||||||| ||||||||| | |||| |||||||||||||||||||    
T  37402857 ttaaacaatttt-----taataattaacatataatttccctttttattatccgtaaccagtgtc-cgggagcaccggttagcatttccc 37402939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 22225795 - 22225930
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  22225795 ggaaatttttatcataaaaggaagttttgttgacttatttatggattaattaaacaatttttaatgcaataattaacatatagtttccctttttattatc 22225894  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    ||||||||||| | ||||||||||||||||||||||    
T  22225895 cttaaccagtgtcccgggggcaccggttagcatttc 22225930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 34151255 - 34151124
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34151255 aaattcttaccataaaagaaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataattttcctttttattatcct 34151156  T
Q  329 taaccagtgcctcgggggcaccggttagcattt 361  Q
    ||||||||||| | |||||| ||||||||||||    
T  34151155 taaccagtgcc-ccggggcatcggttagcattt 34151124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 169 - 364
Target Start/End: Original strand, 11893392 - 11893588
Alignment:
Q  169 ttaaagttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn--ggaaattcttaccataaaaggaagttttgttgacttattt 266  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||||||||          ||||||| ||| ||||||| ||||||||||||||||||||    
T  11893392 ttaaatttagggtcatgctaaccggtgctcc-ggggcactggttaagcatacaaaaaaaaggaaatttttatcataaaatgaagttttgttgacttattt 11893490  T
Q  267 atggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    || ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| |||||||||||||    
T  11893491 atagattaattaaataattttcaattcaataattaacatataatttccctttttattatccttaaacagtgccctgggggcacctgttagcatttccc 11893588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 235 - 364
Target Start/End: Complemental strand, 55594259 - 55594131
Alignment:
Q  235 ttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 334  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  55594259 ttaccataaaaggaagttttgttgacttacttatggattaattaaacaatttttaatgcaataattaacatataattttcctttttattatccttaacca 55594160  T
Q  335 gtgcctcgggggcaccggttagcatttccc 364  Q
    ||||| | | ||||||||||||||||||||    
T  55594159 gtgcc-ccgaggcaccggttagcatttccc 55594131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 231 - 364
Target Start/End: Original strand, 10110053 - 10110188
Alignment:
Q  231 attcttaccataaaaggaagttttgttgacttatttatggattaattaaacaatttt--caatgcaataattaacatataatttccctttttattatcct 328  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10110053 attcttaccataaaagaaagttttgttgacttatttatagattaattaaacaattttttcaatgcaataattaacatataatttccctttttattatcct 10110152  T
Q  329 taaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||| | ||| ||||||||||||||||||||    
T  10110153 taatcagtgtcccggaggcaccggttagcatttccc 10110188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 6493751 - 6493846
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttatta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6493751 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttatta 6493846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 365
Target Start/End: Original strand, 8749857 - 8749986
Alignment:
Q  235 ttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 334  Q
    ||||||||| || ||  ||||||||||||||||| ||||||||| ||||||||||||| ||||||||  ||| ||||| | |||||| || ||||| |||    
T  8749857 ttaccataatagaaaactttgttgacttatttatagattaattacacaattttcaatgtaataattattataaaattttcttttttagtaaccttagcca 8749956  T
Q  335 gtgcctcgggggcaccggttagcatttccca 365  Q
    ||||| | || ||||||||||||||||||||    
T  8749957 gtgcc-ccggagcaccggttagcatttccca 8749986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 366
Target Start/End: Complemental strand, 54897494 - 54897306
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| |||||||||||||| ||||| |||||||||| |||         ||||||| ||||||||||||||| || || |||||||  ||||  |||||    
T  54897494 gggtcctgctaaccggtgcctccgggacactggttaaacataccataaaaggaaattattaccataaaaggaaattgtttttgactttattataaattaa 54897395  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| || | || |||||||||||||||| ||||||||||||||||||||||||||    
T  54897394 ttatacaattt-caatgcattaactactatataatttcctttctcat-atccttaaccagtgccccgggggcaccggttagcatttcccaa 54897306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 28120058 - 28120147
Alignment:
Q  187 taaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    ||||||||||||||||||||| ||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28120058 taaccggtgcccccggggcacaggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 28120147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 365
Target Start/End: Complemental strand, 32217136 - 32217044
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  32217136 attaattacacaattt-caatgcattaactactatataatttccttttttat-atccttaaccagtgccccgggggcaccagttagcatttccca 32217044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 47092719 - 47092657
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttca 289  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  47092719 ggaaatttttatcataaaatgaagttttgttgacttatttatggattaatcaaacaattttca 47092657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 363
Target Start/End: Original strand, 3999451 - 3999571
Alignment:
Q  242 aaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctc 341  Q
    ||||||||  ||| ||||||| |||||||||| |||| |||||||||||||||| || ||  || |||||||| |||||| |||| |||||| |||| ||    
T  3999451 aaaaggaaacttttttgactt-tttatggatttattacacaattttcaatgcaacaactactatgtaatttccttttttagtatcattaaccggtgcttc 3999549  T
Q  342 gggggcaccggttagcatttcc 363  Q
      || |||||||||||||||||    
T  3999550 ttggacaccggttagcatttcc 3999571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 18067974 - 18068065
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| |||||||| |||||| ||| ||  ||||||||||| |||| || | |||||||||||||| ||||||||||||||||||||||||    
T  18067974 attaattacacaatttt-aatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccc 18068065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 29591376 - 29591189
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||| ||||||||||||||||||||||||| |||||||||         || |||| ||||||||||||| || | || |||||||  ||||  ||||    
T  29591376 agggtcctgctaaccggtgcccccggggcactagttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaatta 29591277  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    | || |||| |||||||||| ||| ||  ||||||||| |||| ||  ||| ||||||||||||| |||||||||| |||||||||||||    
T  29591276 agtacacaa-tttcaatgcattaactactatataattt-ccttattcatattcttaaccagtgccccgggggcaccagttagcatttccc 29591189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 43202478 - 43202569
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| |||||||| |||||| ||||||  ||||||||||| |||| || | ||||||| |||||| ||||||||||||||||||||||||    
T  43202478 attaattacacaatttt-aatgcattaattactatataatttcctttttcat-acccttaactagtgccccgggggcaccggttagcatttccc 43202569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 43944692 - 43944507
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||||||||||||||||||| |||| ||||||||||||||         || |||| |||||||||||||||  | || ||||| |  ||||  |||||    
T  43944692 gggtcttgctaaccggtgccctcggg-cactggttaagcataccatacaagggaattattaccataaaaggaaactgtttttgacattattataaattaa 43944594  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||||||||| ||| ||||||||||||||||||||    
T  43944593 ttacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccggaggcaccggttagcatttccc 43944507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 16821040 - 16820998
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  16821040 tagggtcctgctaaccggtgcccccggggcactggttaagcat 16820998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 32202575 - 32202667
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| |||||||||| ||||| ||||| ||||||||| |||||||||    
T  32202575 attaattacacaattt-caatgcattaactactatataatttccttttttat-atccttaacccgtgccccggggacaccggttaacatttccca 32202667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 789625 - 789716
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||| ||||| ||||||||||||||||||||||||    
T  789625 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaacccgtgccccgggggcaccggttagcatttccc 789716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 15186334 - 15186243
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||| | ||| ||  ||||||||||| |||| || | |||||||||||||| ||||||||||||||||||||||||    
T  15186334 attaattacacaattt-caatggattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccc 15186243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 16536235 - 16536048
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||||||||||||||||||| ||          | |||| ||||||||||||| || | || ||||| |  ||||  ||||    
T  16536235 agggtcctgctaaccggtgcccccggggcactggttaagaataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaatta 16536136  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| |||| |||||||||| ||| ||  ||||||||| |||||||  || |||||| | ||||| ||||||||||||||||||||||||    
T  16536135 attacacaa-tttcaatgcattaactactatataattt-cctttttcatacccttaatccgtgccccgggggcaccggttagcatttccc 16536048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 46688355 - 46688396
Alignment:
Q  323 tatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  46688355 tatccttaaccagtgcctcgggggcaccagttagcatttccc 46688396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 4268930 - 4269008
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||| ||| ||  ||||| ||||| |||| || | |||||||||||||| ||||||||||||||||||||||||    
T  4268930 tttcaatgcattaactactatatagtttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccc 4269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 28755711 - 28755619
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| | ||| ||||||||||||||||||||    
T  28755711 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgcc-ctgggacaccggttagcatttcccaa 28755619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 47231980 - 47232058
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||| ||| ||  ||||||||||| |||| |  |||||||||||||||  ||||||||||||||||||||||||    
T  47231980 tttcaatgcattaactattatataatttcctttttcac-atccttaaccagtgctccgggggcaccggttagcatttccc 47232058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 366
Target Start/End: Complemental strand, 54054675 - 54054546
Alignment:
Q  236 taccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 334  Q
    |||||||||||||| || || |||||||  ||||  |||||||| || |||| ||||||| ||| ||  ||||||||||  |||| || ||||||||||     
T  54054675 taccataaaaggaaattgtttttgactttattatcaattaattacactattt-caatgcattaactattatataatttcttttttcat-atccttaaccg 54054578  T
Q  335 gtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||||| | ||||||||||||||||||||||||    
T  54054577 gtgcccccggggcaccggttagcatttcccaa 54054546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 54054716 - 54054675
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  54054716 agggtcctgccaaccggtgcccccggggcactggttaagcat 54054675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 12356430 - 12356244
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaagg-aagttttgttgacttatttatggattaa 275  Q
    ||||| |||||||||||||||||||  ||||||||||||||         || |||| ||| ||||||||| || | || |||||||  ||||  |||||    
T  12356430 gggtcctgctaaccggtgcccccggaacactggttaagcataccataaaagagaattattatcataaaaggaaactgtttttgactttattataaattaa 12356331  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| | || |||||||| | ||| ||  ||||||||| |||||||  ||||||||||||||  ||| ||||||||||||||||||||||    
T  12356330 ttatataa-tttcaatgtattaactactatataattt-cctttttcatatccttaaccagtatctcaggggcaccggttagcatttccc 12356244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 33108669 - 33108713
Alignment:
Q  174 gttagggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||    
T  33108669 gttagggtcctgctaaccggtgcctccggggcacgggttaagcat 33108713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 4269002 - 4268971
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  4269002 tgctaaccggtgcccccggggcactggttaag 4268971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 339
Target Start/End: Complemental strand, 9964820 - 9964745
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcc 339  Q
    ||||| ||| ||||| | || |||||||||||||||||| ||||||||||  ||||||  ||||||||||| ||||    
T  9964820 tttattgatcaattacaaaaatttcaatgcaataattaatatataatttctatttttaacatccttaaccactgcc 9964745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 10426097 - 10426066
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  10426097 tgctaaccggtgcccccggggcactggttaag 10426066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 15186249 - 15186280
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  15186249 tgctaaccggtgcccccggggcactggttaag 15186280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 18068059 - 18068028
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  18068059 tgctaaccggtgcccccggggcactggttaag 18068028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 20654774 - 20654673
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcggg---ggcaccggttagcatt 360  Q
    ||||| ||||||||| ||||||||||||||||||  ||   |||||||||| |||||| |||| |||| | ||||| || |   ||||||||||||||||    
T  20654774 tttattgattaattacacaattttcaatgcaatagctactctataatttccttttttagtatcattaaacggtgccccgaggcaggcaccggttagcatt 20654675  T
Q  361 tc 362  Q
    ||    
T  20654674 tc 20654673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 24142268 - 24142307
Alignment:
Q  274 aattaaacaattttcaatgcaataattaacatataatttc 313  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  24142268 aattaaacaattttcaatgcaataattactatataatttc 24142307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 53374903 - 53374942
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  53374903 ttagggtcttgttaaccggtgcccccggggcactagttaa 53374942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 54897314 - 54897345
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  54897314 tgctaaccggtgcccccggggcactggttaag 54897345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 3783596 - 3783688
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||||||| |||||| ||| ||  ||||||||||  |||| || ||  |||||| ||||| ||| |||||||||||||||||||||    
T  3783596 attaattaaacaatttt-aatgcattaactactatataatttcatttttcat-atgtttaaccggtgccccggaggcaccggttagcatttccca 3783688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 7769125 - 7769087
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  7769125 agggtcctgctaaccggtgcccccggggcacgggttaag 7769087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 55882774 - 55882684
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||||||  |||||||||   |||||  |||||||||| |||||| ||| | ||||||||||||||||||    
T  55882774 attaattacacaattt-caatgcattaattactatataatttt--tttttcatatccttaacgagtgccccggagacaccggttagcatttccc 55882684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 4089233 - 4089142
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||| | |||| || | |||||| ||||||| | ||||||||||||||||||||||    
T  4089233 attaattacacaattt-caatgcattaactactatataattttctttttcat-acccttaatcagtgccccaggggcaccggttagcatttccc 4089142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 7769029 - 7768938
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| |||| || ||| ||  ||||||||||| |||| || | |||||||||||||| |||||| |||| ||||||||||||    
T  7769029 attaattacacaattt-caatacattaactactatataatttcctttttcat-acccttaaccagtgccccgggggtaccgattagcatttccc 7768938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 363
Target Start/End: Complemental strand, 15023534 - 15023444
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    |||||||| | | ||||||||||||||| ||  ||||||||| |  |||||  |||||||||||||||| ||||  ||||||||| |||||||    
T  15023534 attaattacatagttttcaatgcaataactattatataattttc--ttttagcatccttaaccagtgccccgggaacaccggttaacatttcc 15023444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 18067878 - 18067915
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    |||||||||||||||||||||||||||| || ||||||    
T  18067878 agggtcttgctaaccggtgcccccggggaacgggttaa 18067915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 36395286 - 36395245
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  36395286 agggtcctgctaactggtgcccccagggcactggttaagcat 36395245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 42898841 - 42898932
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| ||||||||||||||||  ||  |||||| ||| ||||||||    
T  42898841 attaattacacaattt-caatgcattaactactatataatttccttttttat-atccttaaccagtgccctggaagcaccgattaacatttccc 42898932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 4268822 - 4268858
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  4268822 gggtcctgctaaccggtgccctcggggcactggttaa 4268858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 16820980 - 16821032
Alignment:
Q  306 ataatttccctttttattatccttaaccagtgcctcgggggcaccggttagca 358  Q
    ||||||||| ||| |  ||| ||||||||||||| ||||||||||||||||||    
T  16820980 ataatttccttttatggtatgcttaaccagtgccccgggggcaccggttagca 16821032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 363
Target Start/End: Original strand, 19503200 - 19503289
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    |||||||| ||||||| ||||| | ||| ||  ||||||||||| |||| || ||||||||||||| || |||| ||||||||||||||||||    
T  19503200 attaattacacaattt-caatgtattaactagtatataatttcctttttcat-atccttaaccagtacc-cgggagcaccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 39877247 - 39877287
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||| |||||||| ||||| ||||||||||||||||||||    
T  39877247 gggtcctgctaacccgtgcctccggggcactggttaagcat 39877287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 40120045 - 40120005
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||| |||||| |||||||||||||||| |||||||||    
T  40120045 tccttaaacagtgcttcgggggcaccggttaacatttccca 40120005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 43012770 - 43012730
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||| |||||||| |||||||||||||||||||| ||||    
T  43012770 tccttatccagtgccccgggggcaccggttagcattgccca 43012730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 18955828 - 18955692
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18955828 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcat 18955729  T
Q  329 taaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  18955728 taaccagtgccacgggggcatcggttagcatttccca 18955692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 29566837 - 29566699
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29566837 ggaaattcttatcataaaaagaagttttgttgatttatttatggattaattaaataattttcaatgcaataattaacatataatttccctttttattatc 29566738  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  29566737 cttaacccgtgccccgggggcaccggttagcatttccca 29566699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 39751521 - 39751659
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||    
T  39751521 ggaaattcttaccataaaaggaagttttgttgacttatttatagattaattaaacaatttttaatgcaataaataatatataattttcctttttattatc 39751620  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  39751621 cttaaccagtgccccgggggcaccggttagcatttccca 39751659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 177 - 363
Target Start/End: Original strand, 43714187 - 43714373
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngg-aaattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| |||||||||||| ||| ||||||||||||||||||           ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  43714187 agggtcatgctaaccggtgtcccgggggcactggttaagcatacaaaaaaaataaatttttaccataaaaggaagttttgttgacttatttatagattaa 43714286  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  43714287 ttaaacaattttcaatgcaataattaacatataatttccctttttattatcc-taaccagtgccccgggggcaccggttagcgtttcc 43714373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 24261502 - 24261364
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24261502 ggaaattcttatcataaaaggaagttttgttgacttatttatgggttaattaaacaattttcaatgcaataattaacatataatttctctttttattatc 24261403  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||||| | | ||||| ||| |||||||||    
T  24261402 cttaaccagtgcctcagagacaccgattaacatttccca 24261364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 40268058 - 40267920
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40268058 ggaaattattatcataaaaggaagttttgttgacttatttatagattaattaaacaattttcaatgcaataattaacctataatttccctttttattatc 40267959  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||  ||||| ||  |||||||||||||||    
T  40267958 cttaaccagtgctccggggacattggttagcatttccca 40267920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 364
Target Start/End: Original strand, 42655326 - 42655463
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    |||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  42655326 ggaaattcttattataaaatgaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttaccttttcattatc 42655425  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||| |||||  ||| ||||||  ||||||||||||    
T  42655426 cttaacaagtgctccggaggcaccacttagcatttccc 42655463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 187 - 332
Target Start/End: Complemental strand, 39206363 - 39206217
Alignment:
Q  187 taaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaatt 285  Q
    ||||||||||||| ||||||| ||||||||||         ||||||| ||| |||||||| |||||||||||||||||||||| |||||||||| ||||    
T  39206363 taaccggtgccccgggggcaccggttaagcatacaaaaaaaggaaatttttatcataaaagaaagttttgttgacttatttatgaattaattaaataatt 39206264  T
Q  286 ttcaatgcaataattaacatataatttccctttttattatccttaac 332  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  39206263 ttcaatacaataattaacatataatttccctttttattatccttaac 39206217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 242 - 337
Target Start/End: Complemental strand, 37479689 - 37479594
Alignment:
Q  242 aaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtg 337  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||    
T  37479689 aaaaggaagttttgttgatttatttatagattaattaaacaattttcaaggcaataattaacatataatttccttttttattatccttaatcagtg 37479594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 2490156 - 2490297
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| |||||||||||||||||| ||||| ||||||||||         ||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  2490156 agggtcatgctaaccggtgcccccgaggcacgggttaagcatacaaaaaaaggaaatttttaccataaaatgaagttttgttgacttatttatgaattaa 2490255  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttcccttt 318  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  2490256 ttaaacaattttcaatgcaataattaatatat-atttcccttt 2490297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 325
Target Start/End: Complemental strand, 2270659 - 2270564
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattat 325  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  2270659 aaattcttacaataaaaggaagttttattgacttatttatgcattaattaaacaattttcaatacaataattaacatataa-ttccctttttattat 2270564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 365
Target Start/End: Complemental strand, 34228868 - 34228681
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| |||||||||||||||||||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  |||||    
T  34228868 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 34228769  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||| ||||||| ||||||| ||||||  ||||||||||| |||| || |||||||||||||||| | |||||||||||||||||||||||    
T  34228768 ttacacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgcccccggggcaccggttagcatttccca 34228681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 235 - 364
Target Start/End: Complemental strand, 4811686 - 4811557
Alignment:
Q  235 ttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 334  Q
    ||||||||||| |||  |||||||| ||||||||| |||||||| ||||||||||||||||||||||  ||||||||| | |||||| ||| |||||||     
T  4811686 ttaccataaaaagaaactttgttgatttatttatgaattaattatacaattttcaatgcaataattactatataattttcttttttagtattcttaaccg 4811587  T
Q  335 gtgcctcgggggcaccggttagcatttccc 364  Q
    |||||   | ||||||| ||||||||||||    
T  4811586 gtgcccttgaggcaccgattagcatttccc 4811557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 177 - 361
Target Start/End: Complemental strand, 13643198 - 13643015
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| ||||||||||||| ||  |||||||||||||||||         || |||| ||||||||||||||| |||| |||||||  ||||  |||||    
T  13643198 agggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattttttttgactttattataaattaa 13643099  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    ||| | ||||| ||||||| ||| ||  ||||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||    
T  13643098 ttacataattt-caatgcattaactactatataatttcc-tttttcgtatccttaaccagtgccccgggggcaccggttagcattt 13643015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 177 - 361
Target Start/End: Complemental strand, 13743623 - 13743440
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| ||||||||||||| ||  |||||||||||||||||         || |||| ||||||||||||||| |||| |||||||  ||||  |||||    
T  13743623 agggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattttttttgactttattataaattaa 13743524  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    ||| | ||||| ||||||| ||| ||  ||||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||    
T  13743523 ttacataattt-caatgcattaactactatataatttcc-tttttcgtatccttaaccagtgccccgggggcaccggttagcattt 13743440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 365
Target Start/End: Original strand, 30675574 - 30675759
Alignment:
Q  179 ggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnnggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaatt 277  Q
    |||| |||||||||||| ||||||||||||||||||||||         | |||| |||||||||||||||  | || ||||| |  ||||  |||||||    
T  30675574 ggtcctgctaaccggtgtccccggggcactggttaagcataccataaaaggaattattaccataaaaggaaactgtttttgacattattataaattaatt 30675673  T
Q  278 aaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    | ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||||||||| |||||||||||||||||||||||||    
T  30675674 acacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccca 30675759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 364
Target Start/End: Original strand, 27988498 - 27988685
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatt 273  Q
    ||||||| |||||||||||||||||||| ||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  |||    
T  27988498 tagggtcctgctaaccggtgcccccggg-cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaatt 27988596  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| ||| ||||||||||||||||||||    
T  27988597 aattacacaattt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgccccggaggcaccggttagcatttccc 27988685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 364
Target Start/End: Original strand, 28045800 - 28045987
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatt 273  Q
    ||||||| |||||||||||||||||||| ||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  |||    
T  28045800 tagggtcctgctaaccggtgcccccggg-cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaatt 28045898  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| ||| ||||||||||||||||||||    
T  28045899 aattacacaattt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgccccggaggcaccggttagcatttccc 28045987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 178 - 363
Target Start/End: Original strand, 16888544 - 16888728
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| ||||||||||||||||||||||| |||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  |||||    
T  16888544 gggtcctgctaaccggtgcccccggggcattggttaagcataccacaaaagagaattattaccataaaaggaaactgtttttgactttattataaattaa 16888643  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||| ||||| |||||||||||||||||||||||    
T  16888644 ttacacaattt-caatgcattaactactatataatttcctttttcat-atccttaacctgtgcc-cgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 168655 - 168466
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnng-gaaattcttaccataaaaggaagtt-ttgttgacttatttatggat 272  Q
    |||||||| ||||||||||||||||||||||| |||||||||||          | |||| |||||||||||||||  | || ||||| |  ||||  ||    
T  168655 ttagggtcctgctaaccggtgcccccggggcattggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaat 168556  T
Q  273 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||||||||| ||| ||||||||||||||||||||    
T  168555 taattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccggaggcaccggttagcatttccc 168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 2490320 - 2490375
Alignment:
Q  309 atttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  2490320 atttccctttttattatccttaacctgtgccccggaggcaccggttagcatttccc 2490375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 364
Target Start/End: Original strand, 4537743 - 4537930
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||| | ||||||| ||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  ||||    
T  4537743 agggtcctgctaaccggtgcctctggggcacaggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatta 4537842  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| | ||||| ||||||| ||| ||  |||||||||||  |||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  4537843 attacataattt-caatgcattaactactatataatttcctattttat-atccttaaccagtgccccggaggcaccggttagcatttccc 4537930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 359
Target Start/End: Original strand, 33899108 - 33899190
Alignment:
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcat 359  Q
    |||| |||||||||||| |||||||||  ||||||||||| ||||||| || ||||||||||||| |  ||||||||||||||||    
T  33899108 attacacaattttcaattcaataattattatataatttccttttttatcattcttaaccagtgcccc--gggcaccggttagcat 33899190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 365
Target Start/End: Original strand, 2805258 - 2805447
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttt-tgttgacttatttatggatt 273  Q
    |||||||  ||||||||||||| ||||||||||||||||||||         || |||| |||||||||||||||  |  | |||||||  |||| | ||    
T  2805258 tagggtccggctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgcttttgactttattataggtt 2805357  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||| | ||||||||| ||||| |||||||||    
T  2805358 aattacacaattt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgtcccgggggcactggttaacatttccca 2805447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 364
Target Start/End: Original strand, 33357182 - 33357315
Alignment:
Q  230 aattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||| |||||||||||||||  | || |||||||  ||||  |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||    
T  33357182 aattattaccataaaaggaaactgtttttgactttattataaattaattacacaattt-caatgcattaactactatataatttcctttttcat-atcct 33357279  T
Q  329 taaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||  |||||||||| |||||||||||||    
T  33357280 taaccagtgctccgggggcaccagttagcatttccc 33357315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 22199333 - 22199239
Alignment:
Q  240 ataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 334  Q
    ||||||||||  |||||| ||||||||||| |||||||| | || ||||||||||||| |||  |||||| |||| |||||| || |||||||||    
T  22199333 ataaaaggaaactttgttaacttatttatgaattaattacataaatttcaatgcaatagttactatataaattccatttttagtaaccttaacca 22199239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 365
Target Start/End: Complemental strand, 37373296 - 37373205
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||| | |||||||||||||||||||||||||    
T  37373296 attaattacacaattt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgtc-cgggggcaccggttagcatttccca 37373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 16394207 - 16394248
Alignment:
Q  324 atccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  16394207 atccttaaccagtgccccgggggcaccggttagcatttccca 16394248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 20831661 - 20831737
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||||| ||| ||  ||||||||||| |||| || |||||||||||||| | ||||||||||||||||||||||    
T  20831661 tttcaatgcattaactactatataatttcctttttcat-atccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 12652707 - 12652629
Alignment:
Q  286 ttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||| ||| ||  ||||||||||| |||| || |||||||||||||||  | |||||||||||||||||||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcat-atccttaaccagtgctccaggggcaccggttagcatttccca 12652629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 364
Target Start/End: Original strand, 9063051 - 9063237
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||  ||||||||||||||||||||         || |||| |||||||||||| || || || |||||||  ||||  ||||    
T  9063051 agggtcctgctaaccggtgcttccggggcactggttaagcatatcacaaaagggaattattaccataaaagaaaattgtttttgactttattataaatta 9063150  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||  || |||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||||||| || ||| ||||||||||||||||||    
T  9063151 attgcacgattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgc-tccgggacaccggttagcatttccc 9063237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 16394061 - 16394101
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  16394061 gggtcctgctaaccggtgcccccggggcattggttaagcat 16394101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 363
Target Start/End: Complemental strand, 21595937 - 21595848
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    |||||||| ||||||| ||||||| ||| |   ||||||||||| |||| || | |||||||||||||| |||||||||||||||||||||||    
T  21595937 attaattacacaattt-caatgcattaactcctatataatttcctttttcat-acccttaaccagtgcc-cgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 23722287 - 23722247
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  23722287 tccttaaccagtgccccgggggcaccggttaacatttccca 23722247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 2490213 - 2490162
Alignment:
Q  308 aatttccctttttattatccttaaccagtgcctcgggggcaccggttagcat 359  Q
    ||||||| |||||  ||| ||||||| |||||||||||||||||||||||||    
T  2490213 aatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcat 2490162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 9934609 - 9934563
Alignment:
Q  167 atttaaagttagggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  9934609 atttaaagtt-gggtcctgctaaccggtgcccccggggcacgggttaa 9934563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 13643018 - 13643049
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  13643018 tgctaaccggtgcccccggggcactggttaag 13643049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 13743443 - 13743474
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  13743443 tgctaaccggtgcccccggggcactggttaag 13743474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 16394241 - 16394210
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  16394241 tgctaaccggtgcccccggggcactggttaag 16394210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 30675752 - 30675721
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  30675752 tgctaaccggtgcccccggggcactggttaag 30675721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 37713989 - 37714071
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggc 347  Q
    ||||| ||||||||| | ||||||||||||||||| ||  || |||||| | |||||| |||||||||| |||| |||||||||    
T  37713989 tttatagattaattacataattttcaatgcaataactattatgtaattttcttttttagtatccttaactagtg-ctcgggggc 37714071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 39751652 - 39751621
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  39751652 tgctaaccggtgcccccggggcactggttaag 39751621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 45185083 - 45185052
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  45185083 tgctaaccggtgcccccggggcactggttaag 45185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 5725596 - 5725646
Alignment:
Q  314 cctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||| ||||||||| |  ||| ||||||||||||||||||||    
T  5725596 cctttttattatctttaaccagttcaccggaggcaccggttagcatttccc 5725646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 11112730 - 11112639
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||| | |||  ||||| |||||||||||||    
T  11112730 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgtcccggatgcaccagttagcatttccc 11112639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 18955883 - 18955842
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    |||||| |||||||||||||||||||||||  ||||||||||    
T  18955883 agggtcatgctaaccggtgcccccggggcatgggttaagcat 18955842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 43119308 - 43119217
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||| | |||| || ||| |||| ||||||| || |||||||||||||||||||||    
T  43119308 attaattatacaattt-caatgcattaactactatataattttctttttcat-atctttaatcagtgccccgagggcaccggttagcatttccc 43119217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 43723739 - 43723772
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaagca 217  Q
    |||||||||||||||||||||||| |||||||||    
T  43723739 tgctaaccggtgcccccggggcacgggttaagca 43723772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 7304526 - 7304558
Alignment:
Q  186 ctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||||||||||||||| |||||||||||||||    
T  7304526 ctaaccggtgcccccggagcactggttaagcat 7304558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 9254069 - 9254101
Alignment:
Q  330 aaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||||| ||||||||||||||||||||||    
T  9254069 aaccagtgccccgggggcaccggttagcatttc 9254101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 9254097 - 9254069
Alignment:
Q  184 tgctaaccggtgcccccggggcactggtt 212  Q
    |||||||||||||||||||||||||||||    
T  9254097 tgctaaccggtgcccccggggcactggtt 9254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 23722257 - 23722285
Alignment:
Q  187 taaccggtgcccccggggcactggttaag 215  Q
    |||||||||||||||||||||||||||||    
T  23722257 taaccggtgcccccggggcactggttaag 23722285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 36923790 - 36923849
Alignment:
Q  304 atataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||| |||| || |||||||| ||||||||||| |||| ||||||| |||||||    
T  36923790 atataatttcctttttcat-atccttaatcagtgcctcggaggcagcggttagtatttccc 36923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 42449064 - 42449008
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttcccttttt 320  Q
    |||||||||||| || ||||||||||||| ||||| ||  ||||||||||| |||||    
T  42449064 tttatggattaactacacaattttcaatgtaataactactatataatttccattttt 42449008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 43714367 - 43714339
Alignment:
Q  185 gctaaccggtgcccccggggcactggtta 213  Q
    |||||||||||||||||||||||||||||    
T  43714367 gctaaccggtgcccccggggcactggtta 43714339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 3e-55; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 227 - 364
Target Start/End: Original strand, 44854390 - 44854526
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44854390 ggaaattattaccataaaatgaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataattt-cctttttattatc 44854488  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||| |||| | |||||||||||||||||    
T  44854489 cttaaccagtgccccgggagtaccggttagcatttccc 44854526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 178 - 361
Target Start/End: Original strand, 31782565 - 31782749
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaat 276  Q
    ||||| |||||||||||||||||| ||||| ||||||||||         ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  31782565 gggtcatgctaaccggtgcccccgaggcacgggttaagcatacaaaaaaaggaaatttttaccataaaaagaagttttgttgacttatttatggattaat 31782664  T
Q  277 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||| ||||| |||||||||||||||    
T  31782665 taaacaattttcaatgcaataattaatatataatttctctttttattatccttaatccgtgccccggggacaccggttagcattt 31782749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 228 - 362
Target Start/End: Complemental strand, 26270119 - 26269987
Alignment:
Q  228 gaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 327  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26270119 gaaatttttaccataaaaggaagttttgttgacttatttatagattaattaaacaattttcaatgcaataattaacatataatttctctttttattatcc 26270020  T
Q  328 ttaaccagtgcctcgggggcaccggttagcatttc 362  Q
     ||||||||||| ||||||||||||||||||||||    
T  26270019 -taaccagtgcc-cgggggcaccggttagcatttc 26269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 228 - 364
Target Start/End: Original strand, 5282304 - 5282440
Alignment:
Q  228 gaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 327  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5282304 gaaattcttaccataaaaggaagtttttttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccccttttattatcc 5282403  T
Q  328 ttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| ||||| | ||| |||| || |||| |||||||    
T  5282404 ttaatcagtgtcccggaggcatcgattagtatttccc 5282440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 229 - 363
Target Start/End: Complemental strand, 29771550 - 29771417
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  29771550 aaatttttactataaaaggaagttttgttgacttatttatggattaattaat-aattttcaatgtaataattaacatataatttccttttttattatcct 29771452  T
Q  329 taaccagtgcctcgggggcaccggttagcatttcc 363  Q
    ||||||||||| |||||||| ||||||||||||||    
T  29771451 taaccagtgccccgggggcatcggttagcatttcc 29771417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 15135772 - 15135908
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15135772 aaattattaccataaaaaaaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 15135871  T
Q  329 taaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||| |||| || ||| ||||  ||||||||||||||||    
T  15135872 taa-cagtaccccggaggcattggttagcatttcccaa 15135908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 228 - 364
Target Start/End: Complemental strand, 45262045 - 45261903
Alignment:
Q  228 gaaattcttaccataaaaggaagttttgttgacttatttatggat--taattaaacaattttcaatgcaataattaacata---taatttccctttttat 322  Q
    |||||| |||||||||||||||||||||||||||||| |||  ||  ||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  45262045 gaaattattaccataaaaggaagttttgttgacttatatatttatggtaattaaacaattttcaatgcaataattaacatataataatttccctttttat 45261946  T
Q  323 tatccttaaccagtg-cctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  45261945 tatccttaaccagtgccctggggggcaccggttagcatttccc 45261903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 227 - 355
Target Start/End: Complemental strand, 28178538 - 28178410
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||  ||||||||||||    
T  28178538 ggaaattctaaccataaaagaaagttttgttgacttatttatggattaattaaacaattttcaatgtaataattaatatataatttttctttttattatc 28178439  T
Q  327 cttaaccagtgcctcgggggcaccggtta 355  Q
    ||||| | |||||  ||||||||| ||||    
T  28178438 cttaatccgtgccctgggggcaccagtta 28178410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 228 - 365
Target Start/End: Original strand, 28012005 - 28012141
Alignment:
Q  228 gaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 327  Q
    |||||||||| ||||||| |||  ||||||||||||||||| ||||||||  |||||||| |||||||||||||  ||||||||| |||||||| |||||    
T  28012005 gaaattcttatcataaaaagaaactttgttgacttatttatagattaattccacaattttgaatgcaataattactatataattttcctttttaatatcc 28012104  T
Q  328 ttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||||  | | ||||||||||||| |||||||||    
T  28012105 ttaaccagtatc-ccggggcaccggttatcatttccca 28012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 177 - 366
Target Start/End: Complemental strand, 20553118 - 20552929
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||||||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  ||||    
T  20553118 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatta 20553019  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||| ||||||| ||||||| ||||||  ||||||||||| |||| || |||||||||||||||| | ||||||||||||||||||||||||    
T  20553018 attacacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgcccccggggcaccggttagcatttcccaa 20552929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 366
Target Start/End: Complemental strand, 44854388 - 44854308
Alignment:
Q  284 ttttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| | | ||||||||||||||||||||||||||    
T  44854388 ttttcaatgcaataattaatatataattt-cctttttattatccttaaccag-gacccgggggcaccggttagcatttcccaa 44854308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 30486396 - 30486210
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| |||||||||||||||||||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  |||| | ||||    
T  30486396 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagtttaa 30486297  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||||| |||| || ||| ||  ||||||||||| |||| || |||||||||||||||| |||||||||| |||||||||||||    
T  30486296 ttacacaattt-caatacattaactactatataatttcctttttcat-atccttaaccagtgccccgggggcaccagttagcatttccc 30486210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 366
Target Start/End: Complemental strand, 31438833 - 31438644
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||| ||||||||||||||||||||||         || |||| ||| |||||||||||  | || |||||||  ||||  ||||    
T  31438833 agggtcctgctaaccggtgtccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaatta 31438734  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||| ||||||| ||||||| ||| ||   |||||||||| |||| || |||||||||||||||| |||| |||||||||||||||||||||    
T  31438733 attacacaattt-caatgcattaactactgtataatttcctttttcat-atccttaaccagtgccccgggagcaccggttagcatttcccaa 31438644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 362
Target Start/End: Complemental strand, 44331840 - 44331741
Alignment:
Q  263 atttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||||||||||| |||| |||||||||||||||||  |||||| |||  |||||| || ||||||| |||||| ||||||||||| ||| ||||||    
T  44331840 atttatggattaattacacaagtttcaatgcaataattactatataaattctttttttagtaaccttaactagtgccccgggggcaccgattaacatttc 44331741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 364
Target Start/End: Original strand, 22068318 - 22068505
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatt 273  Q
    ||||||| |||||| ||||||||||||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  |||    
T  22068318 tagggtcctgctaatcggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatt 22068417  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||| ||||||| ||||||| ||| ||  |||||||| ||||||||  ||||||||||||||||| |||||||||  |||||||||||||    
T  22068418 aattatacaattt-caatgca-taactactatataatt-ccctttttcatatccttaaccagtgccccgggggcacttgttagcatttccc 22068505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 366
Target Start/End: Complemental strand, 44588088 - 44587900
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| ||||||||||| ||||||||||||| |||||||||         || |||| |||||||||||||||  | || || ||||  ||||  |||||    
T  44588088 gggtcctgctaaccggtacccccggggcacttgttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaa 44587989  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||| ||||||| ||||| | ||| ||  ||||||||||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  44587988 ttacacaattt-caatgtattaactactatataatttccttttttat-atccttaaccggtgccccgggggcaccggttagcatttcccaa 44587900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 561613 - 561704
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||    
T  561613 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcatttccc 561704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 26891758 - 26891849
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||| ||||||||||| ||||||| |||||||| ||||| | ||||||||||||||||||||||||    
T  26891758 attaattacacaattt-caatgcattaactaatatataatttccttttttat-atccttaatcagtgtcccgggggcaccggttagcatttccc 26891849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 364
Target Start/End: Original strand, 27856395 - 27856582
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||| ||||||||| |||||||||||||||||||||||||         ||||||| ||||||||||||| || | || ||||| |  ||||  ||||    
T  27856395 agggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaatta 27856494  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| |||| |||||||||| ||| ||  ||||||||| |||||||  ||  ||||||||||||| ||||||||||||||| ||||||||    
T  27856495 attacacaa-tttcaatgcattaactattatataattt-cctttttcatactcttaaccagtgccccgggggcaccggttaacatttccc 27856582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 16807318 - 16807409
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||| | |||| |  ||||||||||| |||||||| ||||||||||||||||||    
T  16807318 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 16846599 - 16846690
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||| | |||| |  ||||||||||| |||||||| ||||||||||||||||||    
T  16846599 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 44331897 - 44331839
Alignment:
Q  238 ccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaat 296  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||    
T  44331897 ccataaaaggaaattttgttgacttatttatgaattaattacacaagtttcaatgcaat 44331839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 361
Target Start/End: Original strand, 3668105 - 3668295
Alignment:
Q  170 taaagttagggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttattta 267  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| |||         ||||||| ||||||||||||| || | || ||||| |  |||    
T  3668105 taaagtaagggtcttgctaaccggtgccctcggggcactggttaaacatactataaaaggaaattattaccataaaaggaaactgtttttgacattatta 3668204  T
Q  268 tggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    |  |||||||| |||| |||||||||| ||| ||  ||||||||| ||||||   || |||||||||||| | |||||||||||||||||||||    
T  3668205 taaattaattacacaa-tttcaatgcattaactactatataattt-ccttttccatacccttaaccagtgtc-cgggggcaccggttagcattt 3668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 32360869 - 32361055
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| ||||||||||||||||||||||| |||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  |||||    
T  32360869 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 32360968  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| |  |||| ||||||| ||| ||  ||||||||| | |||| |  |||||||||||||||| ||||||||||||||||||||||||    
T  32360969 ttatattattt-caatgcattaactattatataattttctttttcac-atccttaaccagtgccccgggggcaccggttagcatttccc 32361055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 334
Target Start/End: Original strand, 3336412 - 3336505
Alignment:
Q  242 aaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataatta--acatataatttccctttttattatccttaacca 334  Q
    |||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||| | ||  ||||||||||| | |||||| | ||||||||||    
T  3336412 aaaaggaattttttttgactt-tttatggattaattatacaattttcaatgcaattactattacatataattttcttttttagtgtccttaacca 3336505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 43637300 - 43637164
Alignment:
Q  227 ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattat 325  Q
    ||||||| ||||||||||| ||| || || |||||||  ||||  |||||||| ||||||| ||||||| ||| ||  ||||||||||| | || || ||    
T  43637300 ggaaattattaccataaaaagaaattgtttttgactttattataaattaattacacaattt-caatgcattaactactatataatttccttattcat-at 43637203  T
Q  326 ccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  43637202 ccttaaccagtgtctcgggg-caccggttagcatttccca 43637164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 32860193 - 32860102
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| |||||||||| ||||| | ||||||||||||| ||||||||    
T  32860193 attaattacacaattt-caatgcattaaatactatataatttccttttttat-atccttaacccgtgcccccggggcaccggttaacatttccc 32860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 26387061 - 26387250
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggat 272  Q
    |||||||| || ||||||||||||||  ||||||||||||||||         || |||| |||||||||||| || || || |||||||  ||||  ||    
T  26387061 ttagggtcctgttaaccggtgcccccaaggcactggttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaat 26387160  T
Q  273 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||| ||| | |||| |||||| |||||||||||||    
T  26387161 taattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaacaagtacttcggaggcaccagttagcatttccc 26387250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 361
Target Start/End: Complemental strand, 4381982 - 4381798
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||| |||||||| |||| |||||||||||||||||||||          | |||| ||||||||||||| || | || ||||| |  ||||  ||||    
T  4381982 agggtcctgctaaccagtgctcccggggcactggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaatta 4381883  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    |||| |||| |||||||||| ||| ||  ||||||||| |||||||  || |||||||||||||  |||||||||||||||||||||    
T  4381882 attacacaa-tttcaatgcattaactactatataattt-cctttttcatacccttaaccagtgcaccgggggcaccggttagcattt 4381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 35851917 - 35851955
Alignment:
Q  326 ccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  35851917 ccttaaccagtgccccgggggcaccggttagcatttccc 35851955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 20252833 - 20252740
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||||| || ||   ||| |||||||||| | ||| |||||| |||||||||||||    
T  20252833 attaattacacagttttcaatgcaataactacaatataatttcctttcttgacatctttaaccagtgtcacggaggcaccagttagcatttccc 20252740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 561698 - 561667
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  561698 tgctaaccggtgcccccggggcactggttaag 561667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 30834456 - 30834550
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||||| ||||||  |||||||||  ||||| | | ||||| ||||||||||| ||||    
T  30834456 attaattacacagttttcaatgcaataactattatataatttccttttttagcatccttaacttgtgcc-cagaggcactggttagcattttccaa 30834550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 31782621 - 31782570
Alignment:
Q  308 aatttccctttttattatccttaaccagtgcctcgggggcaccggttagcat 359  Q
    ||||||| |||||  ||| ||||||| |||||||||||||||||||||||||    
T  31782621 aatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcat 31782570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 32361049 - 32361018
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  32361049 tgctaaccggtgcccccggggcactggttaag 32361018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 35851949 - 35851918
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  35851949 tgctaaccggtgcccccggggcactggttaag 35851918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 28277510 - 28277548
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  28277510 agggtgttgctaactggtgcccccggggcactggttaag 28277548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 29293102 - 29293064
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  29293102 agggtgttgctaaccggtgcccccggggcaccggttaag 29293064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 29999053 - 29999149
Alignment:
Q  240 ataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtg 337  Q
    |||||||||| | || ||||||| |||| | |||||||| |||||||||||||||| || ||  ||||||||| | ||||||  || |||||||||||    
T  29999053 ataaaaggaaatatttttgactttttta-gtattaattacacaattttcaatgcaagaactattatataattttcttttttagcattcttaaccagtg 29999149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 10164867 - 10164831
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  10164867 gggtgttgctaaccggtgcccctggggcactggttaa 10164831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 22887936 - 22887896
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||| |||||| |||||||||||| |||||||||||||||    
T  22887936 gggtcatgctaatcggtgcccccggagcactggttaagcat 22887896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 215
Target Start/End: Complemental strand, 27856573 - 27856545
Alignment:
Q  187 taaccggtgcccccggggcactggttaag 215  Q
    |||||||||||||||||||||||||||||    
T  27856573 taaccggtgcccccggggcactggttaag 27856545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 31390071 - 31390012
Alignment:
Q  304 atataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||| |||| || ||||||||| |||||| ||| |||||| |||||||||||||    
T  31390071 atataatttcctttttcat-atccttaactagtgccccggaggcaccagttagcatttccc 31390012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 4e-45; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 233 - 364
Target Start/End: Complemental strand, 53163894 - 53163760
Alignment:
Q  233 tcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaac 332  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  53163894 tcttaccataaaagaaagttttgttgacttatttatggattaattaaacaattttcaatccagtaattaacatataatttccctatttattatccttaac 53163795  T
Q  333 ---cagtgcctcgggggcaccggttagcatttccc 364  Q
       |||||||  ||||||||||||||| |||||||    
T  53163794 cagcagtgccctgggggcaccggttagtatttccc 53163760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 51665765 - 51665870
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  51665765 ggaaattcttaccataaaatgaagtttcgttgacttatttatgaattaattaaacaattttcaatgcaataattaatatataatttctctttttattatc 51665864  T
Q  327 cttaac 332  Q
    ||||||    
T  51665865 cttaac 51665870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 364
Target Start/End: Complemental strand, 49893510 - 49893331
Alignment:
Q  185 gctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaaca 282  Q
    ||||||||||||||||||||||||| ||||||||         || |||| |||||||||||||||  | || |||||||  |||| ||||||||| |||    
T  49893510 gctaaccggtgcccccggggcactgattaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagattaattacaca 49893411  T
Q  283 attttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||    
T  49893410 attt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcatttccc 49893331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 39074605 - 39074418
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 275  Q
    |||||| |||||||||||||||| ||||||||||||||||||         || |||| |||||||||||||||  | | ||||| |  ||||  |||||    
T  39074605 agggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttgacattattataaattaa 39074506  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||||||||| |||||||||||||||||||||||||    
T  39074505 ttacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccca 39074418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 272406 - 272220
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| |||||||||||||||||||||||| | ||||||||         || |||| |||||||||||||||  | || |||||||  ||||  |||||    
T  272406 gggtcctgctaaccggtgcccccggggcaccgattaagcataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaa 272307  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||    
T  272306 ttacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcatttccc 272220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 366
Target Start/End: Original strand, 10617284 - 10617471
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggattaa 275  Q
    ||||| |||||||||||||||||||||||| ||||||||||         || |||| ||||||||||||||| || || |||||||  ||||  |||||    
T  10617284 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaa 10617383  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||| |||||||| |||||| ||| ||  ||||||||||| ||||||| |||||||| ||||| | ||||||||||||||| ||||||||||    
T  10617384 ttacacaatttt-aatgcattaactactatataatttccttttttat-atccttaatcagtgtc-cgggggcaccggttaacatttcccaa 10617471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 12011751 - 12011681
Alignment:
Q  229 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataat 299  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  12011751 aaattcataccataaaagaaagttttgttgacttatttatgaattaattaaccaattttcaatgcactaat 12011681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 48725458 - 48725270
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||| |||  |||||||||||||||||||||         || |||| |||||||||||||||  | || |||||||  ||||  ||||    
T  48725458 agggtcctgctaacccgtggtcccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatta 48725359  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||| ||||||| ||||||| ||||||  ||||||||||| |||| || |||||||||||||||| | |||||||||||||||||||||||    
T  48725358 attacacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgcccccggggcaccggttagcatttccca 48725270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 26966595 - 26966495
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||  |||||| ||||||||| ||||   |||||| |||||||| ||||||||    
T  26966595 tttatggattaattaaacaattttcaatgcaataactactatataatttctttttttagtatccttaatcagt-agtcggggacaccggttggcatttcc 26966497  T
Q  364 ca 365  Q
    ||    
T  26966496 ca 26966495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 31436390 - 31436313
Alignment:
Q  235 ttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataattt 312  Q
    |||||||||||| || ||||||||||||||||||| |||||||| |||||||| |||||||||||||  |||||||||    
T  31436390 ttaccataaaagaaaattttgttgacttatttatgaattaattacacaatttttaatgcaataattactatataattt 31436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 52520868 - 52520681
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||||||||||||||||||||||          | |||| |||||||||||||||  | || ||||| |  ||||  ||||    
T  52520868 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaatta 52520769  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||||||||||| ||||||||||||||||||||||||    
T  52520768 attacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccc 52520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 27644124 - 27644004
Alignment:
Q  240 ataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcc 339  Q
    ||||||| || ||||||||||||||||| |||||||||| |||||||| |||| ||||||||  |||||||||  ||||||| || | ||||||||||||    
T  27644124 ataaaagaaaattttgttgacttatttaaggattaattacacaatttttaatgtaataattactatataattt-actttttagtaactttaaccagtgcc 27644026  T
Q  340 tcgggggcaccggttagcattt 361  Q
       | | |||||||||||||||    
T  27644025 ctagagacaccggttagcattt 27644004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 46352820 - 46352634
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagttttgt-tgacttatttatggattaa 275  Q
    ||||| |||||||||||||| ||||||||| ||||||||||         || |||| |||||||||||||||  | | | ||||||  ||||  |||||    
T  46352820 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttctgactttattatcaattaa 46352721  T
Q  276 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||| ||||||| ||||||| ||| ||   |||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||    
T  46352720 ttacacaattt-caatgcattaactactgtataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcatttccc 46352634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 364
Target Start/End: Complemental strand, 858777 - 858589
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnn-ggaaattcttaccataaaaggaagtt-ttgttgacttatttatggatt 273  Q
    |||||||  ||||||||||||||||||||||| ||||||||||         ||||||| |||||||||||||||  | || |||||||  ||||  |||    
T  858777 tagggtccggctaaccggtgcccccggggcacgggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaatt 858678  T
Q  274 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||| |||||   ||||||||||||| |||||||||    
T  858677 aattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaactagtgcactgggggcaccggtttgcatttccc 858589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 4168370 - 4168182
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagtt-ttgttgacttatttatggatta 274  Q
    |||||| ||||||||||||||||||||| || ||||||||||         || |||| |||||||||||| ||  | || |||||||  ||||  ||||    
T  4168370 agggtcctgctaaccggtgcccccggggtacgggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaatta 4168271  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||| ||||||| |||| || ||| ||  ||||||||||| ||||||| ||||||||||||| || ||| |||||||||||||||||||||    
T  4168270 attacacaattt-caatacattaactactatataatttccttttttat-atccttaaccagttccccggaggcaccggttagcatttccca 4168182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 18014859 - 18014672
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcat-nnnnnnnnggaaattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||||||||||| |||||||||||||||||| ||||||||         ||||||| ||| ||||||||| || | || || ||||  |||| | |||    
T  18014859 agggtcttgctaactggtgcccccggggcactgattaagcataccataaaaggaaattattatcataaaaggaaactgtttttaactttattatagttta 18014760  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| |||| |||||||||| ||| ||  |||||||||  ||||||  ||||||||| ||||||| |||||||||| |||||||||||||    
T  18014759 attacacaa-tttcaatgcattaactactatataattt-actttttcatatccttaatcagtgccccgggggcaccagttagcatttccc 18014672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 27994387 - 27994487
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    ||||||||||||||| | |||||||| | || ||||||  ||| ||||||  |||||| ||||||||||||||||| |||||||| |||||| |||||||    
T  27994387 tttatggattaattacataattttcactacattaattactataaaatttct-tttttagtatccttaaccagtgccccgggggcatcggttaacatttcc 27994485  T
Q  364 ca 365  Q
    ||    
T  27994486 ca 27994487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 364
Target Start/End: Original strand, 34300689 - 34300800
Alignment:
Q  252 tttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccg 351  Q
    ||||||||||| |||||| ||| |||| |||| |||||||| ||||| ||   |||||||||  ||||||||||||||||||||||||| || | || ||    
T  34300689 tttgttgactt-tttatgaattgattacacaactttcaatgtaataactactgtataatttcattttttattatccttaaccagtgccttggagacatcg 34300787  T
Q  352 gttagcatttccc 364  Q
    |||| ||||||||    
T  34300788 gttaacatttccc 34300800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 25743909 - 25743842
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaa 331  Q
    |||||| |||||||| |||||||| |||||||||||||  ||||||||||| |||||| |||||||||    
T  25743909 tttatgaattaattacacaatttttaatgcaataattactatataatttccttttttagtatccttaa 25743842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 41304083 - 41304005
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||||| ||||||  ||||||||||| |||| || ||||||||||| |||| ||| ||||||||||||||||||||    
T  41304083 tttcaatgcattaattactatataatttcctttttcat-atccttaaccactgccccggaggcaccggttagcatttccc 41304005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 43787058 - 43786870
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaagg-aagttttgttgacttatttatggatta 274  Q
    |||||| |||||||||||||||||||||||||||||||||||          | |||| ||||||||||||| || | || ||||  |  ||||  ||||    
T  43787058 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaatta 43786959  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    |||| |||| |||||||||| ||| ||  ||||||||| |||||||  || | |||||||||||| ||| |||||||||||||||||||||    
T  43786958 attacacaa-tttcaatgcattaactactatataattt-cctttttcataccattaaccagtgccccggaggcaccggttagcatttccca 43786870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 48226005 - 48225967
Alignment:
Q  139 tgtgcatatgtcatctctaaaaatatggatttaaagtta 177  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48226005 tgtgcatatgtcatctctaaaaatatggatttaaagtta 48225967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 48226154 - 48226083
Alignment:
Q  32 aaaattgaaaagtataaaattgatgttgctctcnnnnnnnnnnttaattgattgctcatcttcttcgtccttc 104  Q
    |||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||    
T  48226154 aaaattgaaaagtataaaattgatgttgctctc-aaaaaaaaattaattgattgctcatcttcttcgtccttc 48226083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 331
Target Start/End: Complemental strand, 40614522 - 40614462
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaa 331  Q
    |||| ||| ||||||||||||||||||| ||  |||||||||||||||||| |||||||||    
T  40614522 attagttacacaattttcaatgcaataactactatataatttccctttttagtatccttaa 40614462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 17752777 - 17752703
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggg 345  Q
    |||||||| ||||||||||| ||||||| ||  |||| |||| || ||||| ||||||||||||||||| |||||    
T  17752777 attaattacacaattttcaacgcaataaatactatatgatttaccattttagtatccttaaccagtgccccgggg 17752703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 19054097 - 19054023
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggg 345  Q
    |||||||| ||||||||||| ||||||| ||  |||| |||| || ||||| ||||||||||||||||| |||||    
T  19054097 attaattacacaattttcaacgcaataaatactatatgatttaccattttagtatccttaaccagtgccccgggg 19054023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 23516628 - 23516590
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  23516628 agggtgttgctaaccggtgcccccggggcactggttaag 23516590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 43269737 - 43269779
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    
T  43269737 tagggtcctgctaaccggtgcctccggggcactggttaagcat 43269779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 366
Target Start/End: Complemental strand, 2119509 - 2119429
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||||| ||| ||  ||||||||||| |||| || ||| ||||||||||||||| || ||||||||| ||||||||||    
T  2119509 tttcaatgcattaactactatataatttcctttttcat-atctttaaccagtgcctcgaggacaccggttaacatttcccaa 2119429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 366
Target Start/End: Complemental strand, 23925354 - 23925278
Alignment:
Q  289 aatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||| ||||||  ||||||||||| ||||||| || |||||||||| || |||||| ||| |||||||||||||||    
T  23925354 aatgcattaattactatataatttccttttttat-attcttaaccagttccccgggggtaccagttagcatttcccaa 23925278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 36545127 - 36545164
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36545127 agggtcttgttaaccggtgcccccggggcactggttaa 36545164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 36563187 - 36563150
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36563187 agggtcttgttaaccggtgcccccggggcactggttaa 36563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 364
Target Start/End: Original strand, 40362579 - 40362766
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaag-gaagttttgttgacttatttatggatta 274  Q
    |||||| |||||| |||| |||||||||||||||||||||||         || |||| ||||||||||||  || | || |||||||  ||||  ||||    
T  40362579 agggtcctgctaatcggtacccccggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattatcaatta 40362678  T
Q  275 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||| |||||||| |||||| ||| ||  ||||||||| | |||||  ||||||||| ||||||| ||| ||||| ||||||||||||||    
T  40362679 attacacaatttt-aatgcattaactactatataattt-cttttttcatatccttaatcagtgccccggaggcacgggttagcatttccc 40362766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 6842805 - 6842765
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  6842805 gggtcctgctaaccgctgcccccggggcactggttaagcat 6842765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 13898979 - 13899051
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagt 336  Q
    ||||||||||||||| | |||||||||| |||||||||  ||||||||| | ||||||  ||| |||||||||    
T  13898979 tttatggattaattacaaaattttcaatacaataattactatataattttcttttttagcatctttaaccagt 13899051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 272226 - 272257
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  272226 tgctaaccggtgcccccggggcactggttaag 272257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 20924083 - 20923990
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    |||||||| ||||||| ||||| | ||| ||  ||||||||||| |||| || | |||||||||||||| |||  |||||||||||||||||||||    
T  20924083 attaattacacaattt-caatgaattaactactatataatttcctttttcat-acccttaaccagtgccccggaagcaccggttagcatttcccaa 20923990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 39074425 - 39074456
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  39074425 tgctaaccggtgcccccggggcactggttaag 39074456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 46352640 - 46352671
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  46352640 tgctaaccggtgcccccggggcactggttaag 46352671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 49893337 - 49893368
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  49893337 tgctaaccggtgcccccggggcactggttaag 49893368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 366
Target Start/End: Complemental strand, 52246623 - 52246580
Alignment:
Q  323 tatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||    
T  52246623 tatccttaaccagtgccccggaggcaccagttagcatttcccaa 52246580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 52520687 - 52520718
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  52520687 tgctaaccggtgcccccggggcactggttaag 52520718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 2362860 - 2362799
Alignment:
Q  304 atataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaa 366  Q
    ||||||||||| |||| || ||||||||||| |||  |||| |||||||||||||||||||||    
T  2362860 atataatttcctttttcat-atccttaaccattgcaccgggagcaccggttagcatttcccaa 2362799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 28139350 - 28139308
Alignment:
Q  323 tatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||||||| || ||||||||| ||||||||||||||    
T  28139350 tatccttaaccagtgtcttgggggcaccagttagcatttccca 28139308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 298
Target Start/End: Complemental strand, 49340158 - 49340124
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataa 298  Q
    ||||||||||||||| |||||||||||||||||||    
T  49340158 tttatggattaattacacaattttcaatgcaataa 49340124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 53163954 - 53163912
Alignment:
Q  176 tagggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||    
T  53163954 tagggtcctgctaaccggtgcctccggggcacaggttaagcat 53163912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 23516588 - 23516621
Alignment:
Q  325 tccttaaccagtgcctcgggggcaccggttagca 358  Q
    ||||||||||||||| ||||||||||||||||||    
T  23516588 tccttaaccagtgccccgggggcaccggttagca 23516621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 53489919 - 53490013
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcggggg--caccggttagcatttccca 365  Q
    |||||||| |||||||| |||||| ||| ||  ||||||||||| |||| || | |||||||||||||| ||||||  ||||| |||||||||||||    
T  53489919 attaattacacaatttt-aatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggggcaccgattagcatttccca 53490013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 14887391 - 14887427
Alignment:
Q  179 ggtcttgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  14887391 ggtcttgttaaccggtgcccccggggcacttgttaag 14887427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 41553993 - 41554122
Alignment:
Q  230 aattcttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 328  Q
    |||| |||||||||||||||  | || |||||||  ||||  |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || |||||    
T  41553993 aattattaccataaaaggaaactgtttttgactttattataaattaattacacaattt-caatgcattaactactatataatttcctttttcat-atcct 41554090  T
Q  329 taaccagtgcctcgggggcaccggttagcattt 361  Q
    ||||||||| | | |||||||| ||||||||||    
T  41554091 taaccagtg-caccggggcaccagttagcattt 41554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 50395616 - 50395742
Alignment:
Q  230 aattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcctt 329  Q
    |||| ||||||||||||||| || | |||||||  ||||  |||||||| ||||||| | ||||| ||| ||   |||||||| | |||| || |||| |    
T  50395616 aattattaccataaaaggaaattgttttgactttattatcaattaattacacaattt-ctatgcattaactactgtataattttctttttcat-atccct 50395713  T
Q  330 aaccagtgcctcgggggcaccggttagca 358  Q
    |||||||| | ||||||||||||||||||    
T  50395714 aaccagtgtcccgggggcaccggttagca 50395742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 509039 - 509173
Alignment:
Q  227 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 326  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  509039 ggaaatttttaccataaaagaaagttttgttgacttatttatgaattaattaaacaattttcaattcaataattaacatataatttccatttttattatc 509138  T
Q  327 cttaaccagtgcctcgggggcaccggttagcatttc 362  Q
    |||||| | |  | ||||||||||||||||||||||    
T  509139 cttaactaatatc-cgggggcaccggttagcatttc 509173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 23150 - 22961
Alignment:
Q  175 ttagggtcttgctaaccggtgcccccggggcactggttaagcatnnnnnnnngga-aattcttaccataaaaggaagtt-ttgttgacttatttatggat 272  Q
    ||||||||||||||||||||| ||  |||||||||||||| |||         || |||| ||| |||||||||||  | || |||||||  ||||  ||    
T  23150 ttagggtcttgctaaccggtgtccttggggcactggttaaacataccataaaagagaattattaacataaaaggaaactgtttttgactttattataaat 23051  T
Q  273 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||| ||||||| ||||| | ||||||  ||||||||||| |||| || |||||||||||||||  ||||||||||||||||||||||||    
T  23050 taattacacaattt-caatgtattaattactatataatttcctttttcat-atccttaaccagtgctccgggggcaccggttagcatttccc 22961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 53780 - 53871
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    |||||||| |||||||| |||||| ||| ||  ||||||||||| |||| || | |||||||||||||| ||||||||||||||||||||||||    
T  53780 attaattacacaatttt-aatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccc 53871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 53865 - 53834
Alignment:
Q  184 tgctaaccggtgcccccggggcactggttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  53865 tgctaaccggtgcccccggggcactggttaag 53834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 53684 - 53721
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    |||||||||||||||||||||||||||| || ||||||    
T  53684 agggtcttgctaaccggtgcccccggggaacgggttaa 53721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 95692 - 95767
Alignment:
Q  285 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    ||||||| || ||||||  ||||||||||| |||| || || |||||||||| ||||||||||||||||||||||||    
T  95692 tttcaattcattaattattatataatttcctttttcat-attcttaaccagtacctcgggggcaccggttagcattt 95767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 14955 - 14889
Alignment:
Q  304 atataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttcccaacctgg 371  Q
    ||||||||||  ||||||| ||| |||||||||||| ||||| ||||||||||||||||||| |||||    
T  14955 atataatttctttttttat-atctttaaccagtgccccggggacaccggttagcatttcccagcctgg 14889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 361
Target Start/End: Complemental strand, 116295 - 116207
Alignment:
Q  271 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcattt 361  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||| |||||| ||||| |||||||||||||||||||||    
T  116295 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atctttaacctgtgccccgggggcaccggttagcattt 116207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 11066 - 11154
Alignment:
Q  272 ttaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||| ||||||| ||||||| ||| ||| ||||||||| |||||||  |||||||||||||||  || |||||||| |||||||||||||    
T  11066 ttaattacacaattt-caatgcattaactaatatataattt-cctttttcatatccttaaccagtg--tccggggcaccagttagcatttccc 11154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 6246 - 6295
Alignment:
Q  314 cctttttattatccttaaccagtgcctcgggggcaccggttagcatttcc 363  Q
    |||||||  ||||||||||||||||| | |||||||||||||||||||||    
T  6246 cctttttcatatccttaaccagtgccccaggggcaccggttagcatttcc 6295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 6109 - 6146
Alignment:
Q  177 agggtcttgctaaccggtgcccccggggcactggttaa 214  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  6109 agggtcctgctaaccggtgcccccggggcacgggttaa 6146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 68435 - 68476
Alignment:
Q  323 tatccttaaccagtgcctcgggggcaccggttagcatttccc 364  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  68435 tatccttaaccagtgccccgggggcaccagttagcatttccc 68476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 66498 - 66430
Alignment:
Q  264 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaac 332  Q
    ||||||||||||||| ||||||||||||||||||| ||  |||||| |||  |||||  ||||||||||    
T  66498 tttatggattaattacacaattttcaatgcaataactattatataacttcattttttcgtatccttaac 66430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 50607 - 50547
Alignment:
Q  304 atataatttccctttttattatccttaaccagtgcctcgggggcaccggttagcatttccca 365  Q
    ||||||||||| |||| || ||| |||||||||||| ||| ||||||||||| |||||||||    
T  50607 atataatttcctttttcat-atctttaaccagtgccccggaggcaccggttaacatttccca 50547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 10896 - 10856
Alignment:
Q  178 gggtcttgctaaccggtgcccccggggcactggttaagcat 218  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  10896 gggtcctgctaaccgctgcccccgaggcactggttaagcat 10856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University