View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17203_low_60 (Length: 346)
Name: NF17203_low_60
Description: NF17203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17203_low_60 |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 17 - 343
Target Start/End: Original strand, 2636698 - 2637024
Alignment:
| Q |
17 |
agttgcatagcattatcaaaataaattaaatgcataatgtagaccgtacgatcagatctcatgtggctcacatcactgatgataatgaaccgacaccacg |
116 |
Q |
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| T |
2636698 |
agttgcatagcattataaaaataaattaaatgcataatgtagaccgtacgatcagatctcatgtggctcacatcactgatgataatgaaccgacaccacg |
2636797 |
T |
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| Q |
117 |
tgtcagataattgtttgtcaaaataaggacaactctttagtaatgggtgtacccaataaatgtttcacccaaaccccattcacattcattactctataaa |
216 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2636798 |
tgtcagatagttgtttgtcaaaataaggacaactctttagtaatgggtgtacccaataaatgtttcacccaaaccccattcacattcattactctataaa |
2636897 |
T |
|
| Q |
217 |
taccctacattcattctaacttgatcccacatctcctcattaatatctcatttggttctctcttacctacaaagagagtttttccaaatctagaggtgct |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2636898 |
taccctacattcattctaacttgatcccacatctcctcattaatatctcatttggttctctcttacctacaaagagagtttttccaaatctagaggtgct |
2636997 |
T |
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| Q |
317 |
acaatggccatgactaagttctctgct |
343 |
Q |
| |
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|||||||||||||||||||||| |||| |
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| T |
2636998 |
acaatggccatgactaagttctttgct |
2637024 |
T |
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