View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17203_low_85 (Length: 281)
Name: NF17203_low_85
Description: NF17203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17203_low_85 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 24271886 - 24272139
Alignment:
| Q |
17 |
tccttttcttcaagtacgatgtttttatcaactttgtccctcgactgctccggtggagccttgagtacaacaataagccttaaatgagtagcaggaatgg |
116 |
Q |
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| T |
24271886 |
tccttttcttcaagtacaatgtttttatcaactttgtccctcgactgctccggtggagccttgagtacaacaataagccttaaatgagtagcaggaatgg |
24271985 |
T |
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| Q |
117 |
aataccacttcatactaattctgtgcttcatgtgagttacataatatagacggtgaaggcaaagatgatgatgaattgaatgcaaatacctcaaaagatt |
216 |
Q |
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|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
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| T |
24271986 |
aataccacttcatactaattttgtgcttcatgtgagtgacataatatagacggtgaaggtaaagatgatgatgaattgaatgcagatacctcaaaagatt |
24272085 |
T |
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| Q |
217 |
acttaaaaaatgctcatgatcaaggcatgtcattgagaaaacaagatagttcat |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24272086 |
acttaaaaaatgctcatgatcaaggcatgtcattgagaaaacaagatagttcat |
24272139 |
T |
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