View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17203_low_90 (Length: 263)
Name: NF17203_low_90
Description: NF17203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17203_low_90 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 58663 - 58898
Alignment:
| Q |
19 |
atagtctcagctaatttcgacgcagtatgaatgtcnnnnnnncttatcaatacatatataataataatgaagatgaattggatgatttgacaataaactc |
118 |
Q |
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| T |
58663 |
atagtctcagctaatttcgacgcagtatgaatgtcaaaaaaacttatcaatacatatataataataatgaagatgaattggatgatttgacaataaactc |
58762 |
T |
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| Q |
119 |
ctggagaataacaaaagctagaatgaaagggttacaaaagagcagtcttgtccttcaataaccatattgctcagataatttagaaacatttcctatgcac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
58763 |
ctggagaataacaaaagctagaatgaaagggttacaaaagagcagtcttgtccttcaataaccatattgctcagataatttagaaacatttcctatgcac |
58862 |
T |
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| Q |
219 |
aattgatggtccagactcatcatactcagcctttgc |
254 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
58863 |
aattgatggtccagactcatcatactcagcctttgc |
58898 |
T |
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