View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17203_low_94 (Length: 256)
Name: NF17203_low_94
Description: NF17203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17203_low_94 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 16843330 - 16843570
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843330 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
16843429 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843430 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
16843529 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843530 |
attggaaggaccattaccacagtctttgtctcactgttcat |
16843570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 24218077 - 24218300
Alignment:
| Q |
13 |
tgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgtattgg |
112 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||||||| |||||||||| ||||| | ||||||||||||||| |||||||| ||| |||| |||||||| |
|
|
| T |
24218077 |
tgcaatgcaagttccctgaatttgctcaatttggctaacaacaatttaacaggaacgattccacaatgcctgggaacatttccttatctttctgtattgg |
24218176 |
T |
|
| Q |
113 |
atatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaaggacc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
24218177 |
atatgcaaatgaacaacctctatggaagcatgcctaaaacattttcggaaggaaatgcattcgagactataaagttgaatggcaaccaattggagggacc |
24218276 |
T |
|
| Q |
213 |
attaccacagtctttgtctcactg |
236 |
Q |
| |
|
|||||||||||||||| ||||||| |
|
|
| T |
24218277 |
attaccacagtctttggctcactg |
24218300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 16845994 - 16846238
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgat----tccacaatgcctaggaacattaact |
96 |
Q |
| |
|
||||| |||||||||| ||||||| ||| | | | || |||||||||||||||||||| | | ||||||| |||||||||| | |||||||||||| |
|
|
| T |
16845994 |
tcttccacattctgcagtgcaagtttcctgattgttctcaatttggctcacaacaatttaatatgtatgatatattccacaatgcttgggaacattaact |
16846093 |
T |
|
| Q |
97 |
tctcttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaa |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
16846094 |
tctcttaatgtattggatatgcaaatgaacaacctctttggaagcattcctagaaccttttccaaaggaaatgtgtttgtcactataaagttgaatggca |
16846193 |
T |
|
| Q |
197 |
accaattggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || ||||||||| |
|
|
| T |
16846194 |
accaattggaaggaccattaccacggtctttagctaactgttcat |
16846238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16843195 - 16843253
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaattt |
59 |
Q |
| |
|
|||||||||||||||||||||||| | | ||| | || |||||||||||||||||||| |
|
|
| T |
16843195 |
tcttcaacattctgcaatgcaagtttcttgaatgttctcaatttggctcacaacaattt |
16843253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37532926 - 37532686
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||| | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37532926 |
tcttcaacattctgcaatgcaagttacctgaatgttctcaatttggctcacaacaatttgacaggtatgattccacaatgcctgggaacattaacttctc |
37532827 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37532826 |
ttaatgtattggatatgcaaatgaacaacctctatggaaacattcctagaaccttttccaaagaaaatgcatttcagactataaagttgaatggaaacca |
37532727 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
37532726 |
attggaaggaccattaccccagtctttgtctcactgttcat |
37532686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37594030 - 37593790
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||| | || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37594030 |
tcttcaacattctgcaatgcaagttacctgaatgttctcaatttggctcacaacaatttaacaggtatgattccacaatgcctgggaacattaacttctc |
37593931 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593930 |
ttaatgtattggatatgcaaatgaacaacctctatggaaacattcctagaaccttttccaaagaaaatgcatttcagactataaagttgaatggaaacca |
37593831 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593830 |
attggaaggaccattaccacagtctttgtctcactgttcat |
37593790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37696421 - 37696181
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||| | || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37696421 |
tcttcaacattctgcaatgcaagttacctgaatgttctcaatttggctcacaacaatttaacaggtatgattccacaatgcctgggaacattaacttctc |
37696322 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37696321 |
ttaatgtattggatatgcaaatgaacaacctctatggaaacattcctagaaccttttccaaagaaaatgcatttcagactataaagttgaatggaaacca |
37696222 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37696221 |
attggaaggaccattaccacagtctttgtctcactgttcat |
37696181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 37401332 - 37401572
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37401332 |
tcttcaacattctgcaatgccagttccctttatgtgctcgatttggctcacaacaatttgacaggtatgattccacaatgcctgggaacattaacttctc |
37401431 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
37401432 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctagaacctttaccaaaggaaatgcatttgagactataaagttgaatggcaacca |
37401531 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
||||||||||||||||||||| |||||| || ||||||||| |
|
|
| T |
37401532 |
attggaaggaccattaccacaatctttggctaactgttcat |
37401572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37639572 - 37639332
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37639572 |
tcttcaacattctgcaatgccagttccctttatatgctcgatttggctcacaacaatttgacaggtatgattccacaatgcctgggaacattaacttctc |
37639473 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
37639472 |
ttactgtattggatatgcaaatgaacaacctctatggaagcattcctagaaccttctccaaaggaaatgcatttgagactataaagttgaatggcaacca |
37639373 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
||||||||||||||||||||| |||||| || ||||||||| |
|
|
| T |
37639372 |
attggaaggaccattaccacaatctttggctaactgttcat |
37639332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37823730 - 37823490
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
37823730 |
tcttcaacattctgcaatgccagttccctttatatgctcgatttggctcacaacaatttgacaggtatgattccacaatgcctgggaacattaaattctc |
37823631 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
37823630 |
ttcatgtattggatatgcaaatgaacaacctctatggaagcattcctagaacctttaccaaaggaaatgcatttgagactataaagttgaatggcaacca |
37823531 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
||||||||||||||||||||| |||||| || ||||||||| |
|
|
| T |
37823530 |
attggaaggaccattaccacaatctttggctaactgttcat |
37823490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37711330 - 37711090
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| || || |
|
|
| T |
37711330 |
tcttcaacattctgcaatgccagttccctttatgtgctcgatttggctcacaacaatttgaaaggtatgattccacaatgcctaggaacatttcctaatc |
37711231 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
37711230 |
tctatgttttggatatgcaaatgaacaacctctatggaagcattcctagaacctttaccaaaggaaatgcatttgagactataaagttgaatggcaacca |
37711131 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
|||||||||| |||||||||| |||||| || ||||||||| |
|
|
| T |
37711130 |
attggaaggatcattaccacaatctttggctaactgttcat |
37711090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 37702509 - 37702270
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||| | | || ||||||||||||||||||||||||||||||||||||||||| || |||||||| || || |
|
|
| T |
37702509 |
tcttcaacattctgcaatgcaagttccctttacattctcaatttggctcacaacaatttgacaggtatgattccacaatgtctgggaacatttcctcatc |
37702410 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
| | | |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
37702409 |
tctctattttggatatgcaaatgaacaacctctatggaagcattcctagaaccttctccaaaggaaatgcatttgagactataaagttgaatggcaacca |
37702310 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttca |
240 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
37702309 |
attggaaggaccattaccgcagtctttggctcaatgttca |
37702270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 37393211 - 37393451
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctc |
100 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| || | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || |
|
|
| T |
37393211 |
tcttcaacattctgcaatgctagttccctttatatcctcaatttggctcacaacaatttgacaggtatgattccacaatgtctaggaacattttcttatc |
37393310 |
T |
|
| Q |
101 |
ttaatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaacca |
200 |
Q |
| |
|
| | | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||| |||||||||||||| |
|
|
| T |
37393311 |
tctctattttggatatgcaaatgaacaacctctgtggaagcattcctggaaccttttccaaaggaaatatatttgagactataaaattgaatggaaacca |
37393410 |
T |
|
| Q |
201 |
attggaaggaccattaccacagtctttgtctcactgttcat |
241 |
Q |
| |
|
||||||||||||||||||||| | |||| || ||||||||| |
|
|
| T |
37393411 |
attggaaggaccattaccacaatgtttggcttactgttcat |
37393451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 37382667 - 37382896
Alignment:
| Q |
8 |
cattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgt |
107 |
Q |
| |
|
|||| ||||| |||||| |||| ||| |||| |||||||||||||||||||| || || ||||||||||||||| | |||||||| |||||||| || |
|
|
| T |
37382667 |
cattgtgcaacgcaagttccctgaatgtgctcaatttggctcacaacaatttaactggcatgattccacaatgcttgggaacatttccttctctttcggt |
37382766 |
T |
|
| Q |
108 |
attggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaa |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||| |
|
|
| T |
37382767 |
attggatatgcaaatgaacaacctctatggacacattcctagaaccttctccaaaggaaatgcatttgagacaataaagttgaatggaaaccgattggaa |
37382866 |
T |
|
| Q |
208 |
ggaccattaccacagtctttgtctcactgt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||| |
|
|
| T |
37382867 |
ggaccattaccacagtctttggctcactgt |
37382896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 37413547 - 37413726
Alignment:
| Q |
49 |
cacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgtattggatatgcaaatgaacaacctctatggaagcattccta |
148 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
37413547 |
cacaacaatttaacaggcatgattccacaatgcctaggaacatttccttctctttctatattggatatgcaaatgaacaacttgtatggaagctttccta |
37413646 |
T |
|
| Q |
149 |
aaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaaggaccattaccacagtctttg |
228 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37413647 |
gaaccttttccaaaggaaatacatttgagatgataaagttgaacggaaatcaattggaaggaccattaccacagtctttg |
37413726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 237
Target Start/End: Complemental strand, 37435502 - 37435300
Alignment:
| Q |
35 |
tgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgtattggatatgcaaatgaacaacctcta |
134 |
Q |
| |
|
|||| |||||||| |||||||| |||||||| || |||||| ||||||| |||||||| ||| |||| || ||||||||||||||||||||||| | |
|
|
| T |
37435502 |
tgctcaatttggcccacaacaaattgacaggcataattccaaaatgcctgggaacatttccttttctttccgttttggatatgcaaatgaacaaccttaa |
37435403 |
T |
|
| Q |
135 |
tggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaaggaccattaccacagtctttgtctcac |
234 |
Q |
| |
|
||||||||| |||||||| ||||||| ||||||||| || ||||||||||||||||||| |||||||| |||||||||||||| || |||||| ||||| |
|
|
| T |
37435402 |
tggaagcatgcctaaaactttttccagaggaaatgccttcgagactataaagttgaatggcaaccaattagaaggaccattacctcaatctttggctcac |
37435303 |
T |
|
| Q |
235 |
tgt |
237 |
Q |
| |
|
||| |
|
|
| T |
37435302 |
tgt |
37435300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37696556 - 37696498
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaattt |
59 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || || |||||||||||||||||||| |
|
|
| T |
37696556 |
tcttcaacattctgcaatgcaagttccctttataccctcaatttggctcacaacaattt |
37696498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37594165 - 37594110
Alignment:
| Q |
1 |
tcttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaa |
56 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || || ||||||||||||||||| |
|
|
| T |
37594165 |
tcttcaacattctgcaatgcaagttccctttataccctcaatttggctcacaacaa |
37594110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 14553189 - 14552959
Alignment:
| Q |
10 |
ttctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgtat |
109 |
Q |
| |
|
||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| | | | |
|
|
| T |
14553189 |
ttctgcaatgcaagttccctttatatgctcaatttggctcacaacaatttgacaggtatgattccacaatgcctggggacatttcctcttctctctattt |
14553090 |
T |
|
| Q |
110 |
tggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaagg |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
14553089 |
tggatatgcaaatgaacaacctctatggaatcattcctagaaccttttcaaaaggaaatgcatttgagactataaagttgaatggaaaccaattgaaagg |
14552990 |
T |
|
| Q |
210 |
accattaccacagtctttgtctcactgttca |
240 |
Q |
| |
|
|||| |||||||||| ||| ||||||||||| |
|
|
| T |
14552989 |
accactaccacagtcattggctcactgttca |
14552959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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