View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17203_low_96 (Length: 255)
Name: NF17203_low_96
Description: NF17203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17203_low_96 |
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Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 42651543 - 42651307
Alignment:
| Q |
1 |
taccattttgaacattcatacaacatgaagattctagtttacaaacaaagcaaacatctttagagaacacaaaccttagaagatttgctgctacttttgg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42651543 |
taccattttgaacattcatacaacatgaagattctagataacaaacaaagcaaacatctttagagaacacaaaccttagaagatttgctgctacttttgg |
42651444 |
T |
|
| Q |
101 |
aaagtttgaaaccatgaaaagaagacactggagtggttggttgagaagaacccttgtcccagttgacaggtgagagaagagcagcatcagacaatctctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42651443 |
aaagtttgaaaccatgaaaagaagacactggagtggttggttgagaagaacccttgtcccagttgacaggtgagagaagagcagcatcagacaatctctc |
42651344 |
T |
|
| Q |
201 |
agaaaccaccgtagaaggtggaaaatcatcatctaac |
237 |
Q |
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||||||||| ||||||||||||||||||||||||||| |
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| T |
42651343 |
agaaaccacagtagaaggtggaaaatcatcatctaac |
42651307 |
T |
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