View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17204_low_1 (Length: 259)
Name: NF17204_low_1
Description: NF17204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17204_low_1 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 52584020 - 52584273
Alignment:
| Q |
1 |
aaacaacttctcagcatatttttcattcattctatcaatcacatttccaccaacatcaacaagatcttcaagaagtgactgtactggtttaaggtatcta |
100 |
Q |
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| T |
52584020 |
aaacaacttctcagcatatttttcattcattctatcaatcacatttccaccaacatcaacaagatcttcaagaagtgactgtactggtttaaggtatcta |
52584119 |
T |
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| Q |
101 |
gagttcccaataacggaaccaaaactctcacttccataagaagtagaagtagaacggttcaataataatgagttattattattagaacctgaagcaaaag |
200 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52584120 |
gagttcccaataacagaaccaaaactctcacttccataagaagtagaagtagaacggttcaataataatgagttattattattagaacctgaagcaaaag |
52584219 |
T |
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| Q |
201 |
ttccacttccaccactgaaaaaataatcacttgttagattctccaccacaggtt |
254 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
52584220 |
ttccacttccaccactgaaaaaataatcactagttagattctccaccacaggtt |
52584273 |
T |
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