View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17205_high_13 (Length: 257)
Name: NF17205_high_13
Description: NF17205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17205_high_13 |
 |  |
|
| [»] chr1 (8 HSPs) |
 |  |
|
| [»] scaffold0340 (1 HSPs) |
 |  |  |
|
| [»] scaffold0072 (2 HSPs) |
 |  |  |
|
| [»] scaffold0043 (1 HSPs) |
 |  |  |
|
| [»] scaffold0056 (1 HSPs) |
 |  |  |
|
| [»] scaffold0871 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 31260660 - 31260417
Alignment:
| Q |
15 |
aatatgttaataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcata |
114 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31260660 |
aatatgctaataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaaagaataaatttttagctttgcata |
31260561 |
T |
 |
| Q |
115 |
tttttcagaagnnnnnnnnn-tacatttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcg |
213 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31260560 |
tttttcagaagaaaaaaaaaatatctttctaaagaggttgctcagatcatcatctcgtcccatttacagacttgactaacttacatcttccatgcaagcg |
31260461 |
T |
 |
| Q |
214 |
ggataagcttagagaagatagctcatacttttagccacactttt |
257 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31260460 |
ggacaggcttagagaagatagctcatacttttagccacactttt |
31260417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 21536059 - 21535990
Alignment:
| Q |
148 |
aggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggat |
217 |
Q |
| |
|
|||||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21536059 |
aggttgctcaaatcaacatctcatctcatttacagacttgactaacttaccacttccatgcaagcgggat |
21535990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 16114890 - 16114941
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||| ||||||||| ||||| |
|
|
| T |
16114890 |
tgtcatcacaaccccaaatttaaattgttgcttgtcttcaagtaacaaaaga |
16114941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 22624898 - 22624832
Alignment:
| Q |
25 |
taacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||||| | ||| ||||||||||| |||||| ||||| |||||||||||||||||||| ||||| |
|
|
| T |
22624898 |
taacataaaaagacctgtcatcacaaccccaaacttaaacggttgcttgtcctcaagtaacaaaaga |
22624832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 18827469 - 18827537
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| |||||||||| || ||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
18827469 |
aataacgtaagatgaccagtcatcacaaccctaaatttagattgttgtttgtcctcaagtaacgaaaga |
18827537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 25402451 - 25402391
Alignment:
| Q |
31 |
aagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||| ||| ||||||||||| |||||| ||| |||| |||||||||| ||||||||||||| |
|
|
| T |
25402451 |
aagatgacctgtcatcacaaccccaaacttagattgctgcttgtcctaaagtaacgaaaga |
25402391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 9638387 - 9638304
Alignment:
| Q |
174 |
catttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaagatagctcatacttttagccacactttt |
257 |
Q |
| |
|
||||| ||| |||||||||||||| ||| |||||||| |||| | ||||||| |||||| | |||||||| | |||||||||| |
|
|
| T |
9638387 |
cattttcaggcttgactaacttaccactttcatgcaagtgggacatgcttagaaaagataccacatactttcaaccacactttt |
9638304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 21536909 - 21536857
Alignment:
| Q |
44 |
atcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaata |
96 |
Q |
| |
|
||||||| | |||| ||||||||||||||||||||||||| | ||||| |||| |
|
|
| T |
21536909 |
atcacaacctcaaacttaaattgttgcttgtcctcaagtagcaaaagaaaata |
21536857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 67 - 234
Target Start/End: Complemental strand, 20338259 - 20338097
Alignment:
| Q |
67 |
ttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcatatttttcagaagnnnnnnnnntacatttctaaagaggttgctcagatcatcat |
166 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
20338259 |
ttgcttgtcctcaagtaacgaaagagaataaattttaaggtttgcatattttcaggaa-----aaacatacatttctgaagaggttgctcagatcatcat |
20338165 |
T |
 |
| Q |
167 |
ctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaagatag |
234 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||| | |||| ||||| ||||||||| |
|
|
| T |
20338164 |
ctcgtcccatttacagacttgactaacttaccacttccatgcaagagagataggcttatagaagatag |
20338097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 241
Target Start/End: Complemental strand, 20290428 - 20290236
Alignment:
| Q |
44 |
atcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcatatttttcagaagnnnnnnnnntacatttct |
143 |
Q |
| |
|
||||||| |||||| || ||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| | ||||||| |
|
|
| T |
20290428 |
atcacaaccccaaacctagattgttgcttgtcgtcaagtaatgaaagagaataaattttaaggtttgcatatttttcagga----aaaacatacattttc |
20290333 |
T |
 |
| Q |
144 |
aaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaagatagctcatac |
241 |
Q |
| |
|
|||||||| |||| ||||||||||| || |||||||||| ||||||||||||| |||||||||| ||| |||| ||||| ||||||||| |||||| |
|
|
| T |
20290332 |
gaagaggttactcaaatcatcatctcatc-catttacagagttgactaacttaccacttccatgcaggcgagataggcttatagaagatagttcatac |
20290236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 4839099 - 4839197
Alignment:
| Q |
144 |
aaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaagatagctcatact |
242 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| || | |||||||| ||||| |||||| |
|
|
| T |
4839099 |
aaagaggttgctcagatcgtcttctcgtctcatttacagacttgactaacttacaccttccatgaaagcgcgacagaattagagaatatagcccatact |
4839197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 12750836 - 12750908
Alignment:
| Q |
144 |
aaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcggga |
216 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| |||| |
|
|
| T |
12750836 |
aaagaggttgctcagatcatcatctcgtcccatttacagacttgactaacatacacctttgatgcaagtggga |
12750908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 16223571 - 16223622
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16223571 |
tgtcatcacaaccccaaacttaaattgttgcttgtcctcaagtaacgaaaga |
16223622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 13906590 - 13906541
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaa |
89 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
13906590 |
tgtcatcacaaccccaaagttaaattgttgcttgtcctcaagtaacgaaa |
13906541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 52935557 - 52935489
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| | ||||||||| |||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
52935557 |
aataacgtaagatgacctatcatcacaaccccaaatttaaattgttgattgtcctcaagtaacgaaaga |
52935489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 8881426 - 8881358
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| | ||||||||| |||||| ||| |||||| |||||||||||||||||||||| |
|
|
| T |
8881426 |
aataacgtaagatgacatatcatcacaaccccaaacttagattgtttcttgtcctcaagtaacgaaaga |
8881358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 19912653 - 19912721
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| |||||||| || |||||| ||||| |||||||| |||||||||||||||||| |
|
|
| T |
19912653 |
aataacgtaagatgacctgtcatcaaaaccccaaacttaaactgttgcttatcctcaagtaacgaaaga |
19912721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 31283927 - 31283859
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| | ||| ||| ||||||||||| |||||| ||||| | ||||||||||||||||||||||||| |
|
|
| T |
31283927 |
aataacgttagatgacctgtcatcacaaccccaaacttaaactattgcttgtcctcaagtaacgaaaga |
31283859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 8145328 - 8145383
Alignment:
| Q |
30 |
taagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaac |
85 |
Q |
| |
|
||||| ||| ||||| ||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
8145328 |
taagatgacctgtcagcacaaccccaaacttaaattgttgcttgtcctcaagtaac |
8145383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 34276425 - 34276393
Alignment:
| Q |
59 |
ttaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
34276425 |
ttaaattgttgcttgtcctcaagtaacgaaaga |
34276393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 4952595 - 4952517
Alignment:
| Q |
139 |
tttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggata |
218 |
Q |
| |
|
|||| ||||||||||||| |||||||| || ||||||||||| |||||||||||||| ||| |||||||| |||||| |
|
|
| T |
4952595 |
tttccaaagaggttgctcgaatcatcat-tcatctcatttacaagcttgactaacttaccgctttcatgcaagagggata |
4952517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 8765766 - 8765815
Alignment:
| Q |
42 |
tcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||| |||||| ||||| |||||||||||| ||||||||||||| |
|
|
| T |
8765766 |
tcatcacaaccccaaacttaaacggttgcttgtcctgaagtaacgaaaga |
8765815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 8770656 - 8770705
Alignment:
| Q |
42 |
tcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||| |||||| ||||| |||||||||||| ||||||||||||| |
|
|
| T |
8770656 |
tcatcacaaccccaaacttaaacggttgcttgtcctgaagtaacgaaaga |
8770705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 89
Target Start/End: Complemental strand, 19167341 - 19167313
Alignment:
| Q |
61 |
aaattgttgcttgtcctcaagtaacgaaa |
89 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
19167341 |
aaattgttgcttgtcctcaagtaacgaaa |
19167313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 13281653 - 13281556
Alignment:
| Q |
145 |
aagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaagatagctcatact |
242 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||| || |||||| |||||||||||||||||| |||| || ||||||||||||| || ||||| |
|
|
| T |
13281653 |
aagaggttgcttagatcatcatctcgtcccatttacaggctcgactaaattacaccttccatgcaagtgggacaatcttagagaagataacttatact |
13281556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 39270296 - 39270233
Alignment:
| Q |
24 |
ataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacga |
87 |
Q |
| |
|
||||| ||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
39270296 |
ataacgtaagatgacatgtcatcacaaccccaaacttaaattgttgcttgtcctcaagtaacga |
39270233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 2506844 - 2506776
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||||| |||||| |
|
|
| T |
2506844 |
aataacgtaagatgacctgtcatcacaaccccaaacttaaatagttgcttgtcctcaagtaaagaaaga |
2506776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 13287734 - 13287666
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||||||||||||||| |||||| ||| | |||| |||||||||||||||||||||| |
|
|
| T |
13287734 |
aataacgtaagatgacttgtcatcacaaccccaaacttagactgtttcttgtcctcaagtaacgaaaga |
13287666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 19154891 - 19154959
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
19154891 |
aataacgtaagatgacctgtcatcacaaccccaaacttaatctgttgcttgtcctcaagtaacgaaaga |
19154959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20754290 - 20754358
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
20754290 |
aataacgtaagatgacctgtcatcacaaccccaaacttaatctgttgcttgtcctcaagtaacgaaaga |
20754358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 19201531 - 19201599
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||||||||| ||| ||||||||||| |||||| ||| | ||||||||||| | ||||||||||||| |
|
|
| T |
19201531 |
aataacataagatgacctgtcatcacaaccccaaacttagactgttgcttgtcttgaagtaacgaaaga |
19201599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20577564 - 20577632
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| ||| || ||| | ||||||||||||||||||||||||||| |
|
|
| T |
20577564 |
aataacgtaagatgacatgtcatcacaaccccgaacttagactgttgcttgtcctcaagtaacgaaaga |
20577632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 15170771 - 15170720
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||||| |||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
15170771 |
tgtcatcacaaccccaaacataaactgttgcttgtcctcaagtaacgaaaga |
15170720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 24194502 - 24194557
Alignment:
| Q |
36 |
gacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||||||||| | |||| ||||| |||||||||| |||||||||||||||| |
|
|
| T |
24194502 |
gacttgtcatcacaacctcaaacttaaactgttgcttgttctcaagtaacgaaaga |
24194557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 9786855 - 9786751
Alignment:
| Q |
150 |
gttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaagatagctcatacttttagcc |
249 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| ||| ||||||||||||| ||| ||||||| | || | | ||||||||||||| ||||||| | |||| |
|
|
| T |
9786855 |
gttgctcatatcattgtcttgtctcatttatagaattgactaacttaccactttcatgcaaacatgacaggtttagagaagatagttcatactctcagcc |
9786756 |
T |
 |
| Q |
250 |
acact |
254 |
Q |
| |
|
||||| |
|
|
| T |
9786755 |
acact |
9786751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 9761581 - 9761621
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaattaaattgttgcttgtcctcaag |
81 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
9761581 |
tgtcatcacaaccccaaa-ttaaattgttgcttgtcctcaag |
9761621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 145076 - 145112
Alignment:
| Q |
53 |
ccaaaattaaattgttgcttgtcctcaagtaacgaaa |
89 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
145076 |
ccaaacttaaactgttgcttgtcctcaagtaacgaaa |
145112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 13281751 - 13281679
Alignment:
| Q |
25 |
taacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataa |
97 |
Q |
| |
|
|||||||||| || ||||||||||| || ||| ||||| ||||| ||||||||||||| |||||| ||||| |
|
|
| T |
13281751 |
taacataagatgaactgtcatcacaacccaaaacttaaactgttgattgtcctcaagtattgaaagataataa |
13281679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 19201346 - 19201278
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| || ||||||||||| |||||| || | |||||||||| |||||||||||||||| |
|
|
| T |
19201346 |
aataacgtaagatgatctgtcatcacaaccccaaacatagactgttgcttgttctcaagtaacgaaaga |
19201278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 234
Target Start/End: Complemental strand, 32415847 - 32415647
Alignment:
| Q |
30 |
taagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcatatttttcagaagnnnn |
129 |
Q |
| |
|
||||| ||| ||||||||||| || ||| ||||| |||| |||| ||||||||||||||||||||||||||| | ||||||||||||| || | |
|
|
| T |
32415847 |
taagatgacatgtcatcacaaccctaaacttaaaccgttgtttgttctcaagtaacgaaagagaataaattttaaactttgcatattttctagga----a |
32415752 |
T |
 |
| Q |
130 |
nnnnntacatttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaa |
229 |
Q |
| |
|
||| ||| ||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| |||||||| |||| || ||||||||| |
|
|
| T |
32415751 |
aaacataccttttcgaagaggttgctcatatcatcgcatcgtctcatttacagacttgactaacttactactttcatgcaagtgggacaaacttagagaa |
32415652 |
T |
 |
| Q |
230 |
gatag |
234 |
Q |
| |
|
||||| |
|
|
| T |
32415651 |
gatag |
32415647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 20860414 - 20860480
Alignment:
| Q |
25 |
taacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||| ||||| ||| ||||||||||| |||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
20860414 |
taacgtaagatgacctgtcatcacaaccccaaacttaaactgttgcttgtcctcaagtaacgaaaga |
20860480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 23125252 - 23125305
Alignment:
| Q |
180 |
cagacttgactaacttacaccttccatgcaagcgggataagcttagagaagata |
233 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
23125252 |
cagacttgactaacttaccacttccatgcaagcgggacaagcttagagaagata |
23125305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 20548477 - 20548409
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| |||||||| || |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
20548477 |
aataacgtaagatgacctgtcatcaaaaccccaaacttagattgttgcttgtcctcaagtaacgaaaga |
20548409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 24320545 - 24320477
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||| |||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
24320545 |
aataacgtaagatgacctgtcatctcaaccccaaacttaaattgttgcttgtccttaagtaacgaaaga |
24320477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 25572502 - 25572435
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| || || ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
25572502 |
aataacgtaggatgacttgtcatcacaa-cccaaacttaaattgttgcttgttctcaagtaacgaaaga |
25572435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 31600099 - 31600031
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||| |||||| |||||||||| ||||||||||||||| |
|
|
| T |
31600099 |
aataacgtaagaggacctgtcatcacaaccccaaacttaaatggttgcttgtcatcaagtaacgaaaga |
31600031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 19053174 - 19053242
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||| | ||| ||||||||||| |||||| ||| | |||||||||||||||| |||||||||| |
|
|
| T |
19053174 |
aataacgtaaaatgacatgtcatcacaaccccaaacttagactgttgcttgtcctcaattaacgaaaga |
19053242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 24262121 - 24262189
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| || |||||||| |||||| ||||| | ||| ||||||| ||||||||||||| |
|
|
| T |
24262121 |
aataacgtaagatgacctgccatcacaaccccaaacttaaactattgtttgtcctaaagtaacgaaaga |
24262189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 22346152 - 22346366
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcatatttttca- |
121 |
Q |
| |
|
|||||| ||||| ||||||||||||||| || ||| |||||||||||||| ||||||||||| |||||| |||||||| | ||||||||||||| | |
|
|
| T |
22346152 |
aataacgtaagatgacttgtcatcacaacccgaaacttaaattgttgcttatcctcaagtaatgaaagaatataaatttcaatatttgcatattttttac |
22346251 |
T |
 |
| Q |
122 |
gaagnnnnnnnnntacatttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagc |
221 |
Q |
| |
|
||| |||| || |||||||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||| | || |
|
|
| T |
22346252 |
gaa------aacatacagtttcgaagaggttgctcggatcatcatctcgtcccatttacatacttgactaacttaccacttccatgcaaccggtacaatt |
22346345 |
T |
 |
| Q |
222 |
ttagagaagatagctcatact |
242 |
Q |
| |
|
||| | ||||||||||||||| |
|
|
| T |
22346346 |
ttacaaaagatagctcatact |
22346366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 20319842 - 20319745
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcatatttttc |
120 |
Q |
| |
|
|||||||||||| |||||||||||||| | |||| |||| |||||||||| ||||||||||| ||||| | ||||| || | |||||| ||||||| |
|
|
| T |
20319842 |
aataacataagatgacttgtcatcacagcctcaaacttaagttgttgcttggcctcaagtaacaaaagaaagtaaatcttaaattttgcaaatttttc |
20319745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 11782565 - 11782633
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| | ||||||||| |||||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
11782565 |
aataacgtaagatgacctatcatcacaaccccaaacttaaaatggtgcttgtcctcaagtaacgaaaga |
11782633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 22090750 - 22090792
Alignment:
| Q |
39 |
ttgtcatcacaatcccaaaattaaattgttgcttgtcctcaag |
81 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
22090750 |
ttgtcatcacaatcccaaacttgaattgttgcttgtcctcaag |
22090792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 4617167 - 4617235
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||| ||| | ||||||| |||||||||||||||||| |
|
|
| T |
4617167 |
aataacgtaagatgacctgtcatcacaaccccaaacttagacggttgcttatcctcaagtaacgaaaga |
4617235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 17108769 - 17108837
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||||||||||| | | |||||| ||||| | || |||||||||||||||||||||| |
|
|
| T |
17108769 |
aataacgtaagatgacttgtcatcccgaccccaaacttaaaatttttcttgtcctcaagtaacgaaaga |
17108837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 9054095 - 9054142
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacga |
87 |
Q |
| |
|
||||||||||| |||||| ||||||||| |||||||||||||||||| |
|
|
| T |
9054095 |
tgtcatcacaaccccaaacttaaattgtcacttgtcctcaagtaacga |
9054142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 19919146 - 19919096
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaa-ttaaattgttgcttgtcctcaagtaacgaaa |
89 |
Q |
| |
|
||||||||||| |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
19919146 |
tgtcatcacaactccaaaacttaaatggttgcttgtcctcaagtaacgaaa |
19919096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 25096377 - 25096438
Alignment:
| Q |
30 |
taagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||| ||| ||||||||||| ||||| ||| | ||||||||||| ||||||||||||||| |
|
|
| T |
25096377 |
taagatgacatgtcatcacaacaccaaacttagaatgttgcttgtcatcaagtaacgaaaga |
25096438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 17970573 - 17970779
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaac----gaaagagaataaatttttagctttgcatatttt |
118 |
Q |
| |
|
|||||||| ||| ||| ||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||| | | | ||||||||||| |
|
|
| T |
17970573 |
aataacatcagatgacctgtcatcacaaccccaaacttaaattgttgcttgtccttgagtaattaatgaaagagaataaattataaacattgcatatttt |
17970672 |
T |
 |
| Q |
119 |
tcagaagnnnnnnnnntacatttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggata |
218 |
Q |
| |
|
|||| | ||| ||| |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||| |||| | |
|
|
| T |
17970673 |
tcagga----aaaacataccttttcgaagaggttgctcagatcatcatctcgtcccatgtacatacttgactaacttaccacttcaatgcaagtgggaca |
17970768 |
T |
 |
| Q |
219 |
agcttagagaa |
229 |
Q |
| |
|
|||||| |||| |
|
|
| T |
17970769 |
agcttaaagaa |
17970779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 13833627 - 13833411
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcatattt--ttc |
120 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||| |||||||||||| |||||||| ||||||||||| |||||||||| |||||||| ||| ||| |
|
|
| T |
13833627 |
aataacgtaagattacttgtcatcacaatgccaaacttaaattgttgcctgtcctcaggtaacgaaagaaaataaattttattctttgcattttttcttc |
13833528 |
T |
 |
| Q |
121 |
agaagnnnnnnnnntacatttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaactta-caccttccatgcaagcgggataa |
219 |
Q |
| |
|
|||| ||| ||||| ||||| ||||||||||| |||||| | | ||||||| |||| ||| ||||| || |||||| ||| ||||| | |
|
|
| T |
13833527 |
agaa-----aaacatacctttctcaagagtttgctcagatcgtcatcttgacctatttacatactt-acttacttaccaatttccatccaaacgggacat |
13833434 |
T |
 |
| Q |
220 |
gcttagagaagatagctcatact |
242 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
13833433 |
gcttagagaagatagctcatact |
13833411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 29765415 - 29765347
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
29765415 |
aataacgtaagatgacctgtcatcacaaccccaaacttaaattgttgcttgtcctcaagtaacgaaaga |
29765347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 25227339 - 25227400
Alignment:
| Q |
30 |
taagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||| ||| ||||||||||| |||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
25227339 |
taagatgacctgtcatcacaaccccaaacttaaattgttgcttgtcttcaagtaacgaaaga |
25227400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 24751011 - 24751115
Alignment:
| Q |
139 |
tttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaactta-caccttccatgcaagcgggataagcttagagaagatagctc |
237 |
Q |
| |
|
|||| |||||||||||||| ||| | |||||| | |||||||||||||||| ||||| ||| || ||| ||||||||| |||||||||||||| | ||| |
|
|
| T |
24751011 |
tttccaaagaggttgctcatatcgtaatctcgaccgatttacagacttgacttacttaccactttacatccaagcgggacaagcttagagaagaaaactc |
24751110 |
T |
 |
| Q |
238 |
atact |
242 |
Q |
| |
|
||||| |
|
|
| T |
24751111 |
atact |
24751115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 18570565 - 18570631
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaa |
89 |
Q |
| |
|
|||||| ||||| || ||||||||||| |||||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
18570565 |
aataacgtaagatgatctgtcatcacaaccccaaacttagattgttgcttgtccacaagtaacgaaa |
18570631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 25180744 - 25180679
Alignment:
| Q |
24 |
ataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaa |
89 |
Q |
| |
|
||||| ||||| ||| ||||||||||| |||||| |||||| ||| ||| |||||||||||||||| |
|
|
| T |
25180744 |
ataacgtaagatgacatgtcatcacaaccccaaacttaaatagtttcttatcctcaagtaacgaaa |
25180679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 18446883 - 18446815
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| | ||||||||| |||||| ||||| |||||||||||||| ||||||||||| |
|
|
| T |
18446883 |
aataacgtaagatgacctatcatcacaaccccaaacttaaaatgttgcttgtcctcttgtaacgaaaga |
18446815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 15176434 - 15176389
Alignment:
| Q |
45 |
tcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| |||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
15176434 |
tcacaaccccaaacttaaat-gttgcttgtcctcaagtaacgaaaga |
15176389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 17510996 - 17511045
Alignment:
| Q |
42 |
tcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||| | |||| ||||| | ||||||||||||||||||||||||| |
|
|
| T |
17510996 |
tcatcacaacctcaaacttaaactattgcttgtcctcaagtaacgaaaga |
17511045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 17100230 - 17100163
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| | ||| ||| ||||||||||| |||||| ||| ||||||||||||||| |||||||||||| |
|
|
| T |
17100230 |
aataacttgagatgacctgtcatcacaa-cccaaacttagattgttgcttgtcctttagtaacgaaaga |
17100163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 20989311 - 20989263
Alignment:
| Q |
148 |
aggttgctcagatcatcatctcgtctcatttacagacttgactaactta |
196 |
Q |
| |
|
|||||||| | || ||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
20989311 |
aggttgcttatatgatcatctcgtcccatttacagacttgacttactta |
20989263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 21316856 - 21316908
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtc |
75 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| | |||| ||||||||||||||||| |
|
|
| T |
21316856 |
aataacgtaagatgacctgtcatcacaacctcaaacttaaattgttgcttgtc |
21316908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0340 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0340
Description:
Target: scaffold0340; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 17079 - 17176
Alignment:
| Q |
145 |
aagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaagatagctcatact |
242 |
Q |
| |
|
||||||||||||| || ||| |||| |||||||| || ||||||||||||||| ||| ||||||||||||| | |||||||||||||| ||||||| |
|
|
| T |
17079 |
aagaggttgctcaaataatcctctcatctcatttccatacttgactaacttaccactttcatgcaagcgggacatgcttagagaagataattcatact |
17176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 15552438 - 15552535
Alignment:
| Q |
145 |
aagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttacaccttccatgcaagcgggataagcttagagaagatagctcatact |
242 |
Q |
| |
|
||||||||| | |||||| |||| |||||||| |||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
15552438 |
aagaggttgataagatcagtgtctcctctcatttccagacttgactaacttaccacttcattgcaagcggaataagcttagagaagatagttcatact |
15552535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 22569934 - 22569994
Alignment:
| Q |
30 |
taagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaag |
90 |
Q |
| |
|
||||| ||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
22569934 |
taagatgacctgtcatcacaaccccaaacttaaattgttgtttgtcctcaagtaacgaaag |
22569994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 16167900 - 16167962
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttt |
102 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||||||| |||||| || ||||||| |
|
|
| T |
16167900 |
tgtcatcacaatcccaaacttaaattaatgcttgtcctcaagtaatgaaagaaaacaaatttt |
16167962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 16175855 - 16175944
Alignment:
| Q |
30 |
taagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcatattttt |
119 |
Q |
| |
|
||||| ||| |||||| ||||||||||| |||||||||||||||| |||| |||| |||||| || ||||||| |||||||| ||||| |
|
|
| T |
16175855 |
taagatgacatgtcatgacaatcccaaacttaaattgttgcttgttctcatgtaatgaaagaaaacaaattttattctttgcattttttt |
16175944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 21845732 - 21845684
Alignment:
| Q |
43 |
catcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||||| || ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21845732 |
catcacaacccaaaacttaaattgttgcttgtcctcaagtaacgaaaga |
21845684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 15551147 - 15551225
Alignment:
| Q |
42 |
tcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaagagaataaatttttagctttgcatatttttca |
121 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| ||| | ||| ||| |||||| | |||||||||||||||| |
|
|
| T |
15551147 |
tcatcacaaccccaaagttaaattgttgcttgtcctcaa-taagaatagaaaatgaattttaaactttgcatatttttca |
15551225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 26820935 - 26821001
Alignment:
| Q |
25 |
taacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||| ||||| ||| |||||| |||| |||||| |||||||||| | |||||||||||||||||||| |
|
|
| T |
26820935 |
taacgtaagatgacctgtcattacaaccccaaacttaaattgttccatgtcctcaagtaacgaaaga |
26821001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 14273753 - 14273820
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| |||| |||||||||||||||||| ||| ||||||||||| |||||||||| |||| ||||| |
|
|
| T |
14273753 |
aataacgtaagttgacttgtcatcacaatcc-aaacttaaattgttgtttgtcctcaattaacaaaaga |
14273820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 19721762 - 19721701
Alignment:
| Q |
135 |
tacatttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaacttac |
197 |
Q |
| |
|
||||||||| |||||| |||||||| ||||||||||| |||||||||| |||||| |||||| |
|
|
| T |
19721762 |
tacatttctgaagaggc-gctcagattatcatctcgtcccatttacagatttgacttacttac |
19721701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 8322818 - 8322765
Alignment:
| Q |
139 |
tttctaaagaggttgctcagatcatcatctcgtctcatttacagacttgactaa |
192 |
Q |
| |
|
|||| |||||||||||| |||||||| ||||||||||| ||||||||||||| |
|
|
| T |
8322818 |
tttccaaagaggttgcttagatcatcgcttcgtctcatttccagacttgactaa |
8322765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 16175965 - 16176061
Alignment:
| Q |
145 |
aagaggttgctcagatcatcatctcgtctcatttacagacttgactaactta-caccttccatgcaagcgggataagcttagagaagatagctcata |
240 |
Q |
| |
|
||||||||||||| ||| |||||| | | |||||||| |||||||| || || | | |||||| ||||||||||| ||||| ||||| || |||||| |
|
|
| T |
16175965 |
aagaggttgctcaaatcgtcatctagacccatttacatacttgactgacatacctctttccatccaagcgggataggcttatagaagttatctcata |
16176061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 38381 - 38432
Alignment:
| Q |
40 |
tgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
38381 |
tgtcatcacaaccccaaacttaaattgttgcttgtcctcaagtaacgaaaga |
38432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 38482 - 38578
Alignment:
| Q |
145 |
aagaggttgctcagatcatcatctcgtctcatttacagacttgactaactta-caccttccatgcaagcgggataagcttagagaagatagctcata |
240 |
Q |
| |
|
|||||||||||||||||||||| | ||| |||||| |||||| ||| ||||| ||| || | | |||||||||| |||||||||| ||||||||| |
|
|
| T |
38482 |
aagaggttgctcagatcatcatattgtcccatttaaagactttacttacttaccacattgcttcaaagcgggatagacttagagaagttagctcata |
38578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 25532309 - 25532371
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaac |
85 |
Q |
| |
|
|||||| ||| | |||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
25532309 |
aataacgtaaaatgacttgccatcacaaccccaaaattaaattgttgcttgtcctcaagtaac |
25532371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 28918277 - 28918329
Alignment:
| Q |
39 |
ttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||||||||| || ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
28918277 |
ttgtcatcacaaccctaaacttaaattgttgcttgtcctcaagtaacgaaaga |
28918329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 25886215 - 25886156
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagt |
82 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
25886215 |
aataacgtaagatgacctgtcatcacaaccccaaacttaaattgttgcttgtcctcaagt |
25886156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20379359 - 20379427
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||||| ||| ||| ||||||||||| |||||| ||| | ||||||||||||||||||||| ||||| |
|
|
| T |
20379359 |
aataacattagatgacctgtcatcacaaccccaaacttagactgttgcttgtcctcaagtaaccaaaga |
20379427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 27907527 - 27907478
Alignment:
| Q |
42 |
tcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
27907527 |
tcatcacaaccccaattttaaattgttgcttgtcctcaagtaacaaaaga |
27907478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 25922678 - 25922746
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| || ||||||||||| |||||| ||| | ||||||||||||||| ||||||||||| |
|
|
| T |
25922678 |
aataacgtaagataacctgtcatcacaaccccaaacttagactgttgcttgtcctcatgtaacgaaaga |
25922746 |
T |
 |
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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 31449894 - 31449851
Alignment:
| Q |
42 |
tcatcacaatcccaaaattaaattgttgcttgtcctcaagtaac |
85 |
Q |
| |
|
||||||||| |||||| ||||| ||||||||||||||||||||| |
|
|
| T |
31449894 |
tcatcacaaccccaaacttaaactgttgcttgtcctcaagtaac |
31449851 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 32087120 - 32087183
Alignment:
| Q |
22 |
taataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaac |
85 |
Q |
| |
|
||||||| ||||| ||| ||||||||||| | ||| | ||||||||||||||||||||||||| |
|
|
| T |
32087120 |
taataacgtaagatgacatgtcatcacaactcgaaactaaaattgttgcttgtcctcaagtaac |
32087183 |
T |
 |
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Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 88460 - 88392
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||| ||||||||||| |||||||||| |||||||||| |
|
|
| T |
88460 |
aataacgtaagatgacatgtcatcacaaccccaaacttaaattgttgtttgtcctcaattaacgaaaga |
88392 |
T |
 |
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Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 23109 - 23177
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||| ||||||| ||| ||||||||||| |||||| ||| | ||||||||||| ||||||||||||||| |
|
|
| T |
23109 |
aatagcataagatgacctgtcatcacaaccccaaacttagactgttgcttgtcttcaagtaacgaaaga |
23177 |
T |
 |
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Target: scaffold0871 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0871
Description:
Target: scaffold0871; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 4031 - 4099
Alignment:
| Q |
23 |
aataacataagacgacttgtcatcacaatcccaaaattaaattgttgcttgtcctcaagtaacgaaaga |
91 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||| || ||| ||| | ||||||||||||||||||||||||||| |
|
|
| T |
4031 |
aataacgtaagaggacctgtcatctcaaccctaaacttagactgttgcttgtcctcaagtaacgaaaga |
4099 |
T |
 |
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