View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17205_low_1 (Length: 601)

Name: NF17205_low_1
Description: NF17205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17205_low_1
NF17205_low_1
[»] chr2 (35 HSPs)
chr2 (11-353)||(38264370-38264712)
chr2 (401-582)||(38264178-38264359)
chr2 (301-359)||(13240950-13241009)
chr2 (279-354)||(12026188-12026264)
chr2 (301-359)||(14197367-14197427)
chr2 (232-284)||(19336933-19336985)
chr2 (232-284)||(43573170-43573222)
chr2 (301-359)||(12141562-12141621)
chr2 (301-357)||(3481161-3481218)
chr2 (303-359)||(41858749-41858806)
chr2 (232-284)||(9496056-9496108)
chr2 (300-359)||(24583836-24583896)
chr2 (232-284)||(38435142-38435194)
chr2 (300-359)||(38452889-38452949)
chr2 (232-284)||(39029771-39029823)
chr2 (300-359)||(41763246-41763306)
chr2 (300-358)||(3243857-3243916)
chr2 (325-359)||(18958925-18958959)
chr2 (309-358)||(37481830-37481880)
chr2 (232-277)||(9531640-9531685)
chr2 (309-353)||(9556582-9556627)
chr2 (279-359)||(23714444-23714525)
chr2 (279-359)||(24102116-24102197)
chr2 (300-359)||(38434969-38435030)
chr2 (232-284)||(3635363-3635415)
chr2 (232-284)||(3720455-3720507)
chr2 (232-284)||(6219155-6219207)
chr2 (300-359)||(8180798-8180858)
chr2 (232-284)||(12882085-12882137)
chr2 (300-359)||(25834699-25834759)
chr2 (232-284)||(38430074-38430126)
chr2 (304-359)||(38860191-38860247)
chr2 (232-284)||(39709241-39709293)
chr2 (300-359)||(40759118-40759178)
chr2 (232-276)||(41197267-41197311)
[»] chr3 (34 HSPs)
chr3 (279-359)||(54128396-54128477)
chr3 (279-359)||(21200566-21200647)
chr3 (300-359)||(39235156-39235216)
chr3 (307-359)||(50960844-50960897)
chr3 (300-359)||(36303997-36304056)
chr3 (308-359)||(49503766-49503818)
chr3 (300-359)||(52138818-52138878)
chr3 (309-359)||(3987065-3987116)
chr3 (309-359)||(11581462-11581513)
chr3 (301-359)||(41842716-41842775)
chr3 (301-359)||(45289296-45289355)
chr3 (302-355)||(48734341-48734395)
chr3 (279-359)||(19737015-19737096)
chr3 (279-359)||(19757918-19757999)
chr3 (300-359)||(38060449-38060509)
chr3 (300-358)||(19676284-19676343)
chr3 (301-359)||(39600886-39600945)
chr3 (301-359)||(42026741-42026800)
chr3 (301-359)||(46140450-46140509)
chr3 (309-359)||(49841637-49841688)
chr3 (327-357)||(36820193-36820223)
chr3 (232-278)||(41842563-41842609)
chr3 (232-277)||(42510056-42510101)
chr3 (232-284)||(5169022-5169074)
chr3 (301-356)||(7278481-7278537)
chr3 (232-284)||(35033336-35033388)
chr3 (232-284)||(36304156-36304208)
chr3 (324-356)||(36868453-36868485)
chr3 (300-359)||(38430866-38430926)
chr3 (236-284)||(40116382-40116430)
chr3 (300-339)||(43694969-43695009)
chr3 (300-359)||(47233800-47233860)
chr3 (232-284)||(49841806-49841858)
chr3 (301-359)||(50249402-50249464)
[»] chr1 (38 HSPs)
chr1 (284-359)||(43423737-43423813)
chr1 (301-359)||(48431611-48431670)
chr1 (301-358)||(32404731-32404789)
chr1 (300-359)||(5338742-5338802)
chr1 (301-356)||(10569272-10569328)
chr1 (305-359)||(8343067-8343122)
chr1 (301-359)||(40416389-40416448)
chr1 (304-359)||(13827925-13827981)
chr1 (300-359)||(27848009-27848069)
chr1 (312-359)||(38868900-38868948)
chr1 (301-359)||(14226034-14226093)
chr1 (313-359)||(17815490-17815537)
chr1 (304-356)||(16822230-16822283)
chr1 (300-359)||(1210763-1210823)
chr1 (232-284)||(28090734-28090786)
chr1 (300-359)||(34792553-34792613)
chr1 (300-359)||(51602074-51602134)
chr1 (312-359)||(51812543-51812591)
chr1 (301-359)||(1661448-1661507)
chr1 (301-359)||(2544617-2544676)
chr1 (232-275)||(9599434-9599477)
chr1 (301-359)||(17275214-17275273)
chr1 (301-359)||(35828755-35828814)
chr1 (301-359)||(46388394-46388453)
chr1 (232-282)||(21769751-21769801)
chr1 (232-278)||(27072527-27072573)
chr1 (309-359)||(36624080-36624130)
chr1 (307-359)||(7921853-7921906)
chr1 (307-359)||(26016455-26016508)
chr1 (300-352)||(32231158-32231211)
chr1 (232-284)||(6084165-6084217)
chr1 (232-284)||(8796399-8796451)
chr1 (308-359)||(9509336-9509388)
chr1 (300-359)||(15085952-15086012)
chr1 (300-347)||(25979435-25979483)
chr1 (232-284)||(37311795-37311847)
chr1 (232-284)||(39318319-39318371)
chr1 (232-284)||(41560419-41560471)
[»] chr5 (28 HSPs)
chr5 (279-359)||(43475258-43475339)
chr5 (284-359)||(43558015-43558091)
chr5 (279-359)||(18351090-18351172)
chr5 (301-359)||(42199304-42199363)
chr5 (305-359)||(33667234-33667289)
chr5 (301-358)||(4026540-4026598)
chr5 (308-359)||(31636132-31636184)
chr5 (305-358)||(2712963-2713017)
chr5 (301-359)||(7359465-7359523)
chr5 (307-359)||(28676613-28676666)
chr5 (303-359)||(41833789-41833846)
chr5 (300-359)||(4496402-4496462)
chr5 (232-284)||(9235237-9235289)
chr5 (300-359)||(12492588-12492648)
chr5 (232-284)||(32442165-32442217)
chr5 (300-359)||(34273045-34273105)
chr5 (309-359)||(6889011-6889062)
chr5 (324-359)||(15588769-15588804)
chr5 (301-359)||(29938133-29938192)
chr5 (309-358)||(35685783-35685832)
chr5 (232-284)||(418074-418126)
chr5 (308-359)||(1525662-1525714)
chr5 (300-359)||(2075678-2075738)
chr5 (300-359)||(3301862-3301922)
chr5 (300-359)||(10639322-10639382)
chr5 (300-359)||(16347582-16347642)
chr5 (327-359)||(32516574-32516606)
chr5 (300-359)||(38684985-38685045)
[»] chr8 (34 HSPs)
chr8 (301-359)||(9695649-9695708)
chr8 (301-359)||(30748475-30748534)
chr8 (303-359)||(35643808-35643865)
chr8 (305-359)||(12611553-12611608)
chr8 (301-359)||(16917202-16917261)
chr8 (301-344)||(79076-79120)
chr8 (232-284)||(490525-490577)
chr8 (308-359)||(1549589-1549641)
chr8 (300-359)||(12491342-12491402)
chr8 (232-284)||(29520839-29520891)
chr8 (300-359)||(36545167-36545227)
chr8 (232-284)||(43904705-43904757)
chr8 (301-359)||(2518597-2518656)
chr8 (301-359)||(2776434-2776493)
chr8 (304-358)||(16705779-16705836)
chr8 (309-359)||(18474173-18474224)
chr8 (300-358)||(32043609-32043668)
chr8 (301-359)||(41971983-41972042)
chr8 (306-359)||(10080117-10080170)
chr8 (193-284)||(31716010-31716103)
chr8 (325-359)||(41444556-41444590)
chr8 (325-359)||(42493536-42493570)
chr8 (300-341)||(42584407-42584449)
chr8 (302-359)||(45419255-45419313)
chr8 (311-359)||(6483275-6483324)
chr8 (301-353)||(30559717-30559770)
chr8 (232-277)||(35914641-35914686)
chr8 (300-359)||(36395153-36395214)
chr8 (301-349)||(5908676-5908723)
chr8 (312-359)||(7046352-7046400)
chr8 (308-359)||(23023261-23023313)
chr8 (300-359)||(39946875-39946935)
chr8 (300-359)||(40813342-40813402)
chr8 (232-284)||(42469767-42469819)
[»] chr7 (50 HSPs)
chr7 (307-359)||(41948534-41948587)
chr7 (301-352)||(6420695-6420747)
chr7 (308-359)||(12966040-12966092)
chr7 (284-359)||(42187488-42187564)
chr7 (301-359)||(19262638-19262697)
chr7 (301-359)||(25579282-25579341)
chr7 (301-359)||(36101970-36102029)
chr7 (308-357)||(24549905-24549955)
chr7 (310-359)||(28020982-28021032)
chr7 (279-359)||(47848692-47848773)
chr7 (304-359)||(35713713-35713769)
chr7 (301-359)||(38135417-38135476)
chr7 (313-359)||(38920812-38920859)
chr7 (309-359)||(40169667-40169718)
chr7 (310-359)||(27021906-27021956)
chr7 (279-359)||(28628116-28628197)
chr7 (301-353)||(48202907-48202960)
chr7 (304-359)||(7220762-7220818)
chr7 (300-359)||(7273057-7273117)
chr7 (300-359)||(12841479-12841539)
chr7 (300-359)||(13859212-13859272)
chr7 (228-284)||(26741930-26741986)
chr7 (300-359)||(31682806-31682866)
chr7 (232-284)||(34926562-34926614)
chr7 (300-359)||(35906405-35906465)
chr7 (300-359)||(44855376-44855436)
chr7 (300-359)||(49029294-49029354)
chr7 (324-359)||(1740819-1740854)
chr7 (313-359)||(36514424-36514471)
chr7 (301-358)||(18605351-18605409)
chr7 (301-358)||(18637581-18637639)
chr7 (301-358)||(18651015-18651073)
chr7 (305-357)||(5335940-5335993)
chr7 (307-359)||(30200174-30200227)
chr7 (315-359)||(40008636-40008681)
chr7 (300-352)||(43491333-43491386)
chr7 (300-359)||(6374886-6374946)
chr7 (312-359)||(7189442-7189490)
chr7 (232-284)||(9210744-9210796)
chr7 (323-359)||(28542124-28542160)
chr7 (300-359)||(31005241-31005301)
chr7 (232-284)||(32631754-32631806)
chr7 (300-359)||(33072970-33073030)
chr7 (300-347)||(33350010-33350058)
chr7 (232-284)||(36101817-36101869)
chr7 (232-284)||(36239836-36239888)
chr7 (232-284)||(40979968-40980020)
chr7 (300-359)||(43281692-43281752)
chr7 (232-284)||(43281864-43281916)
chr7 (300-359)||(45836684-45836744)
[»] chr6 (12 HSPs)
chr6 (279-359)||(9593889-9593970)
chr6 (305-359)||(33084076-33084131)
chr6 (284-358)||(6293574-6293649)
chr6 (301-359)||(24665828-24665887)
chr6 (232-284)||(34545-34597)
chr6 (284-359)||(2079358-2079434)
chr6 (301-359)||(9749429-9749488)
chr6 (310-359)||(43266-43316)
chr6 (301-354)||(33997747-33997801)
chr6 (235-284)||(9568889-9568938)
chr6 (300-347)||(608187-608235)
chr6 (232-284)||(5096024-5096076)
[»] chr4 (51 HSPs)
chr4 (301-359)||(41192854-41192913)
chr4 (309-359)||(46715585-46715636)
chr4 (305-359)||(50471544-50471599)
chr4 (309-359)||(51252674-51252725)
chr4 (307-359)||(47611745-47611798)
chr4 (301-359)||(50662405-50662465)
chr4 (228-276)||(20605375-20605423)
chr4 (300-359)||(28236201-28236261)
chr4 (304-359)||(54470225-54470281)
chr4 (301-359)||(29398836-29398895)
chr4 (305-359)||(35555856-35555911)
chr4 (305-359)||(42285909-42285964)
chr4 (309-359)||(42639233-42639284)
chr4 (301-359)||(44860864-44860923)
chr4 (309-358)||(38570960-38571010)
chr4 (279-359)||(28497508-28497588)
chr4 (301-357)||(40268468-40268525)
chr4 (301-359)||(50680757-50680817)
chr4 (300-359)||(436247-436307)
chr4 (193-284)||(2557672-2557764)
chr4 (301-353)||(31403223-31403275)
chr4 (300-359)||(31960018-31960078)
chr4 (300-359)||(43433942-43434002)
chr4 (300-359)||(52569719-52569779)
chr4 (300-359)||(53707812-53707872)
chr4 (305-359)||(1427493-1427548)
chr4 (301-359)||(22420919-22420978)
chr4 (305-359)||(33709942-33709997)
chr4 (301-359)||(38903925-38903984)
chr4 (301-359)||(42293454-42293513)
chr4 (300-342)||(53518524-53518567)
chr4 (305-358)||(25257790-25257844)
chr4 (310-359)||(31459048-31459098)
chr4 (325-359)||(49987446-49987480)
chr4 (235-284)||(5306486-5306535)
chr4 (326-359)||(20999037-20999070)
chr4 (301-353)||(31339560-31339613)
chr4 (307-359)||(45094371-45094424)
chr4 (312-359)||(2589008-2589056)
chr4 (300-359)||(4440871-4440931)
chr4 (301-340)||(13805470-13805510)
chr4 (300-359)||(20601850-20601910)
chr4 (232-284)||(25575014-25575066)
chr4 (309-356)||(30853378-30853426)
chr4 (232-284)||(32479228-32479280)
chr4 (300-359)||(33227227-33227287)
chr4 (232-284)||(34208309-34208361)
chr4 (301-340)||(45176043-45176083)
chr4 (300-359)||(48174297-48174357)
chr4 (311-358)||(56225085-56225133)
chr4 (300-359)||(56375308-56375368)
[»] scaffold0018 (2 HSPs)
scaffold0018 (307-359)||(44079-44132)
scaffold0018 (300-359)||(31486-31546)
[»] scaffold0325 (1 HSPs)
scaffold0325 (303-359)||(11816-11873)
[»] scaffold0570 (1 HSPs)
scaffold0570 (300-359)||(1152-1212)


Alignment Details
Target: chr2 (Bit Score: 331; Significance: 0; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 38264712 - 38264370
Alignment:
Q  11 gcagcacagaagtctggttgtcgatcgtagactcgtgcgatccaatgatctaactcataatcttgactgccttgctgccaagtgataatacattgttcac 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38264712 gcagcacagaagtctggttgtcgatcgtagactcgtgcgatccaatgatctaactcataatcttgaccgccttgctgccaagtgataatacattgttcac 38264613  T
Q  111 cacccatttaatttaatcgtatatgtgagccttcctatgtggtcacatggtataaaaatataagcactgtcattgtgggattcaacaacaaccaagcctt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38264612 cacccatttaatttaatcgtatatgtgagccttcctatgtggtcacatggtataaaaatataagcactgtcattgtgggattcaacaacaaccaagcctt 38264513  T
Q  211 aatgcactacatagtggtggttacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatccactctacttagtgcatcatctacaggt 310  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38264512 aatgcactacgtagtgttggttacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatccactctacttagtgcatcatctacaggt 38264413  T
Q  311 cttctctctacatcccaaaccacctaagcctagtttccaccat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38264412 cttctctctacatcccaaaccacctaagcctagtttccaccat 38264370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 401 - 582
Target Start/End: Complemental strand, 38264359 - 38264178
Alignment:
Q  401 aaatgtaataatcattttataaattaaaaattgtgctaaaccattgtaattagggtctctcatcattgattgatcatcagtaggcagtccaagttatctt 500  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38264359 aaatgtaataatcattttataaattaaaaaatgtgctaaaccattgtaattagggtctctcatcattgattgatcatcagtaggcagtccaagttatctt 38264260  T
Q  501 acgccgtaggccatttaggaactaaatttaaagctattcccatggttttgtttgttgtgaatcaagtatcctctgcgcggaa 582  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38264259 acgccgtaggccatttaggaactaaatttaaagctattcccatggttttgtttgttgtgaatcaagtatcctctgcgcggaa 38264178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 13240950 - 13241009
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13240950 atctacatgtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttc 13241009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 12026188 - 12026264
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatc 354  Q
    |||| ||||| |||||| ||  |||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  12026188 gatctactctccttagtacaaaatctacaggtcttctctctacatggtcaaaccacctaagcctagtttccaccatc 12026264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 14197367 - 14197427
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaa-gcctagtttccaccatcttttc 359  Q
    ||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  14197367 atctacaagtcttcactctacatgcccaaaccacctaaagcctagtttccaccatcttttc 14197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 19336933 - 19336985
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||||||||||    
T  19336933 tacatggatcaaattacgccataatgttctatcataaaccatatttcgatcca 19336985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 43573170 - 43573222
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||    
T  43573170 tacatggatcaaattacgccataacgttcgatcataaatcatatttggatcca 43573222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 12141621 - 12141562
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||| ||||| | ||||||||||||||||||  ||||||||||||||||    
T  12141621 atctacaggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttc 12141562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 3481218 - 3481161
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttt 357  Q
    ||||| |||||||||||||||||  |||||||||||||||||  ||||||||||||||    
T  3481218 atctataggtcttctctctacatgtccaaaccacctaagcctgttttccaccatcttt 3481161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 41858806 - 41858749
Alignment:
Q  303 ctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| |||||||||||||||  |||||||| ||||||| ||||||||||||||||||    
T  41858806 ctacatgtcttctctctacatgtccaaaccatctaagcccagtttccaccatcttttc 41858749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 9496108 - 9496056
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||| ||||||    
T  9496108 tacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 9496056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 24583836 - 24583896
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  24583836 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 24583896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 38435194 - 38435142
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| |||||| |||||||||||    
T  38435194 tacatggatcaaattacgccataatgttcaatcataaaccaaatttcgatcca 38435142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 38452889 - 38452949
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  38452889 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 38452949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 39029823 - 39029771
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||| ||||  ||||||||||||||| ||||||    
T  39029823 tacatggatcaaatgacgccataatgttctatcaaaaaccatatttggatcca 39029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 41763246 - 41763306
Alignment:
Q  300 catctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||| |||  |||||||||||||||||| |||| |||| ||||||    
T  41763246 catctacaggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttc 41763306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 3243857 - 3243916
Alignment:
Q  300 catctacaggtcttctctctaca-tcccaaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||| |||||| || |||||    
T  3243857 catctacgggtcttctctctacattcccaaaccatctaagcctattttccatcaactttt 3243916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 18958959 - 18958925
Alignment:
Q  325 ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||| ||||||||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttc 18958925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 37481830 - 37481880
Alignment:
Q  309 gtcttctctctacatcc-caaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||||||||||| | |||||||||||||||||| ||| ||||||||||    
T  37481830 gtcttctctctacatgctcaaaccacctaagcctaggttcaaccatctttt 37481880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 9531640 - 9531685
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatattt 277  Q
    |||||||||||||||||||||||| ||||  ||| |||||||||||    
T  9531640 tacatggatcaaattacgccataatgttccatcataaaccatattt 9531685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 9556582 - 9556627
Alignment:
Q  309 gtcttctctctacatccc-aaaccacctaagcctagtttccaccat 353  Q
    ||||||||||||||| || |||||||||||||||| ||||||||||    
T  9556582 gtcttctctctacatgcctaaaccacctaagcctattttccaccat 9556627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 23714444 - 23714525
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| | ||| ||| ||| ||||||||||||||| || |||| || |||| ||||||||||||||||||||    
T  23714444 gatctactctccttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttc 23714525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 24102116 - 24102197
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| | ||| ||| ||| ||||||||||||||| || |||| || |||| ||||||||||||||||||||    
T  24102116 gatctactctccttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttc 24102197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 38435030 - 38434969
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaa-gcctagtttccaccatcttttc 359  Q
    |||||||| ||||||||| ||||| ||||||||||| || | ||||||||||||||||||||    
T  38435030 catctacaagtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttc 38434969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 3635363 - 3635415
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||  ||||  ||||||||||||||| ||||||    
T  3635363 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatcca 3635415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 3720455 - 3720507
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||||||||||| |||||| ||||  ||| ||||||| ||||||||||    
T  3720455 tacatggatcaaattacaccataatgttctatcataaaccatttttcgatcca 3720507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 6219207 - 6219155
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||||||||||| |||||| ||||  ||| ||||||||||||| ||||    
T  6219207 tacatggatcaaattacaccataatgttctatcataaaccatatttcggtcca 6219155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 8180858 - 8180798
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||||||||||||||||| ||||||||| |||||| || |||| |||| ||||||    
T  8180858 catccacaggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttc 8180798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 12882085 - 12882137
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||||||||||||||| || ||||  ||| ||||||||||| ||||||    
T  12882085 tacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatcca 12882137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 25834759 - 25834699
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| |||||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  25834759 catccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 25834699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 38430126 - 38430074
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||  ||||  ||||||||||||||| ||||||    
T  38430126 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatcca 38430074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 38860247 - 38860191
Alignment:
Q  304 tacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||| |||| || || |||||||||||||||| ||||||| ||||||||    
T  38860247 tacaggtcttctttctaaatgcctaaaccacctaagcctattttccacaatcttttc 38860191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 39709241 - 39709293
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||  ||||  ||| ||||||||||| ||||||    
T  39709241 tacatggatcaaattacgccatagtgttcaatcataaaccatattttgatcca 39709293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 40759178 - 40759118
Alignment:
Q  300 catctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||| | ||||||||||||||| | ||||||||||||  |||||||||||||| |||||    
T  40759178 catctaaaagtcttctctctacatgcacaaaccacctaactctagtttccaccattttttc 40759118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 41197267 - 41197311
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatt 276  Q
    |||||||||||||| ||||||||| ||||  ||||||||||||||    
T  41197267 tacatggatcaaatgacgccataatgttctatcaaaaaccatatt 41197311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 54128477 - 54128396
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||    
T  54128477 gatctactctacgtactgcatcatctacaggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttc 54128396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 21200647 - 21200566
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| ||||  ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  21200647 gatctactctccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttc 21200566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 39235216 - 39235156
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  39235216 catctacaggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttc 39235156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 50960844 - 50960897
Alignment:
Q  307 aggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  50960844 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttc 50960897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 36304056 - 36303997
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  36304056 catctacaggtcttctctctacatgcccaacccatctaa-cctagtttccaccatcttttc 36303997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 49503766 - 49503818
Alignment:
Q  308 ggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttc 49503818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 52138878 - 52138818
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  52138878 catctacaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 52138818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 3987116 - 3987065
Alignment:
Q  309 gtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  3987116 gtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttc 3987065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 11581513 - 11581462
Alignment:
Q  309 gtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  11581513 gtcttctctctacatacccaaaccacctaagtctagtttctaccatcttttc 11581462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 41842716 - 41842775
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||| | |||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  41842716 atctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatcttttc 41842775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 45289296 - 45289355
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| || |||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  45289296 atctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttc 45289355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 48734341 - 48734395
Alignment:
Q  302 tctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatct 355  Q
    ||||||| |||||||||||||| ||||||||||||||||||| |||| |||||||    
T  48734341 tctacagttcttctctctacatgcccaaaccacctaagcctattttctaccatct 48734395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 19737096 - 19737015
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| | || |||||||||||||||||||| ||| | |||||||||||| |||| |||| |||||||||||    
T  19737096 gatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttc 19737015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 19757999 - 19757918
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| | || |||||||||||||||||||| ||| | |||||||||||| |||| |||| |||||||||||    
T  19757999 gatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttc 19757918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 38060509 - 38060449
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  38060509 catctacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 38060449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 19676284 - 19676343
Alignment:
Q  300 catctacaggtcttctctctacatcccaa-accacctaagcctagtttccaccatctttt 358  Q
    |||||||||||||||||||||||| |||| |||||||||||| | |||| | ||||||||    
T  19676284 catctacaggtcttctctctacatgccaataccacctaagccaattttctatcatctttt 19676343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 39600886 - 39600945
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||| ||||| || ||||||||||||| |  ||||||||||||||||    
T  39600886 atctacaggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttc 39600945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 42026741 - 42026800
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| || |||||||||||  | |||||||||||||||||||||||||| |||||||    
T  42026741 atctacaagttttctctctacaagctcaaaccacctaagcctagtttccaccctcttttc 42026800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 46140509 - 46140450
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||| ||  ||||||||||| || |||||||||||| |||||||    
T  46140509 atctacaggtcttctctctatatgtccaaaccacctgagtctagtttccaccgtcttttc 46140450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 49841688 - 49841637
Alignment:
Q  309 gtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  49841688 gtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttc 49841637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 36820193 - 36820223
Alignment:
Q  327 aaaccacctaagcctagtttccaccatcttt 357  Q
    |||||||||||||||||||||||||||||||    
T  36820193 aaaccacctaagcctagtttccaccatcttt 36820223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 41842563 - 41842609
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttc 278  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||||    
T  41842563 tacatggatcaaattacaccataatgttctatcaaaaaccatatttc 41842609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 42510056 - 42510101
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatattt 277  Q
    |||||||||||||||||||||||| ||||  ||| |||||||||||    
T  42510056 tacatggatcaaattacgccataatgttcaatcataaaccatattt 42510101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 5169074 - 5169022
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||  ||||  ||||||||||||||| ||||||    
T  5169074 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatcca 5169022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 356
Target Start/End: Complemental strand, 7278537 - 7278481
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatctt 356  Q
    |||||||||| | |||||||||| |||||||||| | |||| |||||||||||||||    
T  7278537 atctacaggtttgctctctacatgcccaaaccacatgagccgagtttccaccatctt 7278481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 35033388 - 35033336
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||  ||||  ||||||||||||||| ||||||    
T  35033388 tacatggatcaaataacgccatagtgttctatcaaaaaccatatttggatcca 35033336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 36304208 - 36304156
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| || |  ||| ||||||||||| ||||||    
T  36304208 tacatggatcaaattacgccataatgtcctatcataaaccatattttgatcca 36304156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 36868453 - 36868485
Alignment:
Q  324 cccaaaccacctaagcctagtttccaccatctt 356  Q
    ||||||||||||||||||| |||||||||||||    
T  36868453 cccaaaccacctaagcctactttccaccatctt 36868485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 38430926 - 38430866
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| |||||| ||||||||||| ||||| | ||||||||||| |||| |||||||||||    
T  38430926 catctgcaggtcgtctctctacatgcccaatcaacctaagcctattttctaccatcttttc 38430866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 40116382 - 40116430
Alignment:
Q  236 tggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||| ||||  ||| ||||||||||||| ||||    
T  40116382 tggatcaaattacgccataatgttctatcataaaccatatttcggtcca 40116430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 43694969 - 43695009
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagc 339  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  43694969 catctacaggtcttctctctacatgcccaaaccatctaagc 43695009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 47233800 - 47233860
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  47233800 catctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 47233860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 49841858 - 49841806
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||| ||||||| ||||  ||| | ||||||||||||||||    
T  49841858 tacatggatcaaattatgccataatgttctatcatataccatatttcgatcca 49841806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 50249464 - 50249402
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacc---taagcctagtttccaccatcttttc 359  Q
    ||||||| |||||| |||||||| |||||||||||   |||| ||||||||||||||||||||    
T  50249464 atctacatgtcttcactctacatgcccaaaccaccacctaagtctagtttccaccatcttttc 50249402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 43423813 - 43423737
Alignment:
Q  284 actctacttagtgcatcatctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||| | ||| ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  43423813 actctacttactacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttc 43423737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 48431611 - 48431670
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  48431611 atctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttc 48431670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 32404731 - 32404789
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatctttt 358  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  32404731 atctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatctttt 32404789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 5338802 - 5338742
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||    
T  5338802 catctacaggtcttctctctgcatgcccaaaccacctaagctcagtttccaccatcttttc 5338742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 356
Target Start/End: Original strand, 10569272 - 10569328
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatctt 356  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  10569272 atctacaggtcttctctctacatgcccaaaccacctaagccaagttttcaccatctt 10569328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 8343067 - 8343122
Alignment:
Q  305 acaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  8343067 acaggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttc 8343122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 40416448 - 40416389
Alignment:
Q  301 atctacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||| |||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  40416448 atctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttc 40416389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 13827925 - 13827981
Alignment:
Q  304 tacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||||   |||||||||||| |||||||||||||||||||||    
T  13827925 tacaggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttc 13827981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 27848009 - 27848069
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||| ||| |||||||||||||||| || |||| |||||||||||    
T  27848009 catctacaggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttc 27848069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 38868948 - 38868900
Alignment:
Q  312 ttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  38868948 ttctctctacatgcccaaaccacctaagccgagtttccaccatcttttc 38868900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 14226034 - 14226093
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||  | |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  14226034 atctacaggaatcctctctacatgcccaaaccacctaagcctattttccaccatcttttc 14226093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 17815537 - 17815490
Alignment:
Q  313 tctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  17815537 tctctctacatgcccaaaccaactaagcctagtttccaccatcttttc 17815490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 304 - 356
Target Start/End: Original strand, 16822230 - 16822283
Alignment:
Q  304 tacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatctt 356  Q
    ||||||||||||||||||||  |||||||||||||||| |||||| ||||||||    
T  16822230 tacaggtcttctctctacatgtccaaaccacctaagccgagtttctaccatctt 16822283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 1210823 - 1210763
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  1210823 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 1210763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 28090734 - 28090786
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||| ||||||    
T  28090734 tacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 34792553 - 34792613
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  34792553 catctacgggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttc 34792613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 51602134 - 51602074
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  51602134 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 51602074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 51812591 - 51812543
Alignment:
Q  312 ttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttc 51812543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 1661507 - 1661448
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| ||||||||||||||||| | ||||||| || |||||| ||||||||||||||||    
T  1661507 atctataggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttc 1661448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 2544676 - 2544617
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| |||||||||||||||||  |||||||||||||| ||  ||||||||||||||||    
T  2544676 atctataggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttc 2544617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 9599434 - 9599477
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatat 275  Q
    |||||||||||||||||||||||||||||  ||| |||||||||    
T  9599434 tacatggatcaaattacgccataacgttctatcataaaccatat 9599477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 17275273 - 17275214
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||  |||||||||||| | ||||||||||||||| ||||||||| ||||||||    
T  17275273 atctacagggattctctctacatgcacaaaccacctaagccaagtttccacaatcttttc 17275214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 35828755 - 35828814
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| ||||||||||||||||   ||||||||||||| |||| ||||||||||||||||    
T  35828755 atctataggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttc 35828814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 46388453 - 46388394
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||   ||||| ||||||||| ||||||||||||||||||    
T  46388453 atctacaagtcttctctctacatgtgcaaactacctaagccgagtttccaccatcttttc 46388394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 21769751 - 21769801
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatc 282  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||| ||||    
T  21769751 tacatggatcaaattacgccataatgttctatcacaaaccatatttagatc 21769801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 27072527 - 27072573
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttc 278  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||||    
T  27072527 tacatggatcaaattacgccataatgttctatcataaaccatatttc 27072573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 36624080 - 36624130
Alignment:
Q  309 gtcttctctctacatcccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||| |||| |||||||||||||||||| |||| || ||||||||    
T  36624080 gtcttctctcgacatgccaaaccacctaagcctattttctacaatcttttc 36624130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 7921906 - 7921853
Alignment:
Q  307 aggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||||||||||  ||||||||| ||| |||||||||||||||||||||    
T  7921906 aggtattctctctacatgtccaaaccacataaacctagtttccaccatcttttc 7921853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 26016508 - 26016455
Alignment:
Q  307 aggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||| ||||||| ||||||||||||||  |||||||| |||||||||||    
T  26016508 aggtcttctttctacatacccaaaccacctaaatctagtttctaccatcttttc 26016455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 32231158 - 32231211
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccacca 352  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  32231158 catctacaagtcttctctctacatgcccaaaccatctaagcctattttctacca 32231211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 6084217 - 6084165
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||  ||||  ||| ||||||||||| ||||||    
T  6084217 tacatggatcaaattacgccatattgttctatcataaaccatattttgatcca 6084165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 8796451 - 8796399
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||| |||||||||||||| ||||  ||| |||||||||||| |||||    
T  8796451 tacatggattaaattacgccataatgttctatcataaaccatatttcaatcca 8796399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 9509388 - 9509336
Alignment:
Q  308 ggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| ||||||| ||||||||||| |||  |||||||||||    
T  9509388 ggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttc 9509336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 15086012 - 15085952
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  15086012 catctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 15085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 347
Target Start/End: Original strand, 25979435 - 25979483
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttc 347  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||||||||    
T  25979435 catctacgggtcttctctctacatgtccaaaccatctaagcctagtttc 25979483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 37311795 - 37311847
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||  ||||  ||||||||||||||| ||||||    
T  37311795 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatcca 37311847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 39318371 - 39318319
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||  ||||  ||| ||||||||||| ||||||    
T  39318371 tacatggatcaaattacgccatagtgttctatcataaaccatatttggatcca 39318319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 41560471 - 41560419
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||| ||||||    
T  41560471 tacatggatcaaattacgccataatgttctatcataacccatatttggatcca 41560419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 43475339 - 43475258
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| | || ||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  43475339 gatctactctccttactacaacatctacaggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttc 43475258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 43558015 - 43558091
Alignment:
Q  284 actctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| |||| |||| |||||||| |||||||||||| || |||||||||||||||| |||||||||||||||||||    
T  43558015 actcttcttactgcagcatctacaagtcttctctctatatgcccaaaccacctaagcttagtttccaccatcttttc 43558091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 18351090 - 18351172
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctaca--tcccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| ||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||||| |||||    
T  18351090 gatctactctccttattgcataatctacaggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttc 18351172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 42199363 - 42199304
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  42199363 atctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttc 42199304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 33667289 - 33667234
Alignment:
Q  305 acaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  33667289 acaggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttc 33667234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 4026540 - 4026598
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatctttt 358  Q
    |||||||||||| ||||||||||  |||||||||||||| |||||||||||||||||||    
T  4026540 atctacaggtctcctctctacatgtccaaaccacctaagactagtttccaccatctttt 4026598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 31636132 - 31636184
Alignment:
Q  308 ggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  31636132 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttc 31636184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 2713017 - 2712963
Alignment:
Q  305 acaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||||||||||||||| ||||||||||||||| ||||| || ||||||||||    
T  2713017 acaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatctttt 2712963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 7359465 - 7359523
Alignment:
Q  301 atctacaggtcttctctctacatcccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||  |||||||||||||| ||||||||||||| |||| |||||||||| |||||    
T  7359465 atctacatatcttctctctacatgccaaaccacctaaacctattttccaccatattttc 7359523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 28676666 - 28676613
Alignment:
Q  307 aggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||| || |||||||||||| ||| ||||||||||||||||    
T  28676666 aggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttc 28676613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 41833789 - 41833846
Alignment:
Q  303 ctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||| ||||||||| |||||||||||||||| ||  |||||||||||||||    
T  41833789 ctacaggtcttgtctctacatgcccaaaccacctaagcatatgttccaccatcttttc 41833846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 4496462 - 4496402
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  4496462 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttc 4496402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 9235289 - 9235237
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||| ||||||| ||||  ||| ||||||||||||||||||    
T  9235289 tacatggatcaaattatgccataatgttctatcataaaccatatttcgatcca 9235237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 12492588 - 12492648
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  12492588 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 12492648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 32442165 - 32442217
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  || |||||||||||| ||||||    
T  32442165 tacatggatcaaattacgccataatgttctatccaaaaccatatttggatcca 32442217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 34273105 - 34273045
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  34273105 catctgcaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 34273045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 6889062 - 6889011
Alignment:
Q  309 gtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||  ||||||||| |||||||| ||||||||||||||||    
T  6889062 gtcttctctctacatgtccaaaccacttaagcctattttccaccatcttttc 6889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 15588769 - 15588804
Alignment:
Q  324 cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||| |||||||||||||||||||||||||||||    
T  15588769 cccaaatcacctaagcctagtttccaccatcttttc 15588804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 29938192 - 29938133
Alignment:
Q  301 atctacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||| |  |  |||||||||||||||| ||||||||||||||||    
T  29938192 atctacaggtcttctctctataggcttaaaccacctaagcctattttccaccatcttttc 29938133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 35685832 - 35685783
Alignment:
Q  309 gtcttctctctacatcccaaaccacctaagcctagtttccaccatctttt 358  Q
    |||||||||||| |||||||||||||||| | || ||||||| |||||||    
T  35685832 gtcttctctctatatcccaaaccacctaaacttattttccactatctttt 35685783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 418074 - 418126
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| |||||| |||| ||||||    
T  418074 tacatggatcaaattacgccataatgttctatcataaaccacatttggatcca 418126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 1525714 - 1525662
Alignment:
Q  308 ggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||  |||| ||||||||| |||||||| |||||||||||    
T  1525714 ggtcttctctctacatgtccaagccacctaagtctagtttctaccatcttttc 1525662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 2075678 - 2075738
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| | || |||| ||||||    
T  2075678 catctacgggtcttctctctacatgcccaaaccatctaagcctattgtctaccaacttttc 2075738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 3301922 - 3301862
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  3301922 catctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 3301862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 10639382 - 10639322
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||| |||||  || ||||||||| |||| |||| ||||||    
T  10639382 catctacaggtcttctctctacatgcccaattcatctaagcctattttctaccaacttttc 10639322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 16347582 - 16347642
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  16347582 catctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 16347642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 32516606 - 32516574
Alignment:
Q  327 aaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| ||||||||||||||||    
T  32516606 aaaccacctaagcctattttccaccatcttttc 32516574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 38685045 - 38684985
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  38685045 catctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 38684985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 9e-16; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 9695708 - 9695649
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  9695708 atctacaggacttctctctacatgcccaaaccacctaagccgagtttccaccatcttttc 9695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 30748534 - 30748475
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  30748534 atctacaggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttc 30748475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 35643808 - 35643865
Alignment:
Q  303 ctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| ||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  35643808 ctacatgtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttc 35643865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 12611608 - 12611553
Alignment:
Q  305 acaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  12611608 acaggtgttctgtctacatacgcaaaccacctaagcctagtttccaccatcttttc 12611553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 16917261 - 16917202
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| | ||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  16917261 atctacaagccttctctttacatgcccaaaccacctaagcctagtttgcaccatcttttc 16917202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 79120 - 79076
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagt 344  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  79120 atctacaggtcttctctatacatgcccaaaccacctaagcctagt 79076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 490577 - 490525
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||| ||||||    
T  490577 tacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 490525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 1549589 - 1549641
Alignment:
Q  308 ggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| | ||||| ||||||||||||||||| ||||||||||    
T  1549589 ggtcttctctctacatgctcaaactacctaagcctagtttcccccatcttttc 1549641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 12491342 - 12491402
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  12491342 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 12491402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 29520891 - 29520839
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||| ||||||    
T  29520891 tacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 29520839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 36545227 - 36545167
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  36545227 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 36545167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 43904705 - 43904757
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||| ||||||    
T  43904705 tacatggatcaaattacgccataatgttctatcataaaccatatttagatcca 43904757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 2518597 - 2518656
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||   |||||||||||| |||| ||||||||||||||||    
T  2518597 atctacaagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttc 2518656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 2776434 - 2776493
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||| ||||||||||| |||| ||||||||||||||||| |||||| |||||| ||||    
T  2776434 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttc 2776493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 16705836 - 16705779
Alignment:
Q  304 tacaggtcttctctctacat---cccaaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||||||||||||||||   ||||||| || |||||||||| |||||||||||||    
T  16705836 tacaggtcttctctctacatatgcccaaactacttaagcctagtctccaccatctttt 16705779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 18474173 - 18474224
Alignment:
Q  309 gtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||| ||||    
T  18474173 gtcttctctctacatgctcaaaccaactaagcctagtttccaccatcatttc 18474224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 32043668 - 32043609
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatctttt 358  Q
    |||| |||||||||||||||||||  |||||||||| ||| |||||||| ||||||||||    
T  32043668 catccacaggtcttctctctacatggccaaaccaccaaagtctagtttctaccatctttt 32043609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 41971983 - 41972042
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||  ||||||||||||| | || ||||||||||||||||    
T  41971983 atctacacgtcttctctctacatgtccaaaccacctaaacttattttccaccatcttttc 41972042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 10080117 - 10080170
Alignment:
Q  306 caggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||| ||||||||| | | ||||||||||||||||||||||    
T  10080117 caggtcttctctctacatgcccaaaccatc-aggcctagtttccaccatcttttc 10080170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 31716103 - 31716010
Alignment:
Q  193 caacaacaaccaagccttaatgcactacatagtggtg--gttacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||   |||||  | ||||||  | |||||||||||||||||||||||| ||||  ||  ||||||||||| ||||||    
T  31716103 caacaacaaccaagccttatcccactaagtggtggtgacgctacatggatcaaattacgccataatgttctatcttaaaccatatttggatcca 31716010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 41444556 - 41444590
Alignment:
Q  325 ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||| |||||||||||||||||||||    
T  41444556 ccaaaccacctaaacctagtttccaccatcttttc 41444590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 42493536 - 42493570
Alignment:
Q  325 ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||||| ||||||||    
T  42493536 ccaaaccacctaagcctagtttccacaatcttttc 42493570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 42584449 - 42584407
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcct 341  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  42584449 catctacaggttttctctctacatgcccaaaccacctaagcct 42584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 45419313 - 45419255
Alignment:
Q  302 tctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||| ||||||||| ||||||||||||||| ||| |||  |||||||||||    
T  45419313 tctacaggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttc 45419255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 6483324 - 6483275
Alignment:
Q  311 cttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| |||||||| ||||||||||||||||| |||||||||| |||||||    
T  6483324 cttccctctacatgcccaaaccacctaagccaagtttccaccctcttttc 6483275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 30559770 - 30559717
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccat 353  Q
    ||||||| |||||||||||| || ||||||||||||||||||| |||| |||||    
T  30559770 atctacatgtcttctctctaaatgcccaaaccacctaagcctattttcgaccat 30559717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 35914641 - 35914686
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatattt 277  Q
    |||||||||||||||||||||||| ||||  ||| |||||||||||    
T  35914641 tacatggatcaaattacgccataatgttctatcataaaccatattt 35914686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 36395153 - 36395214
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacct-aagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||| ||||||||| || ||||||| |||| |||| ||||||    
T  36395153 catctacaggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttc 36395214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 5908723 - 5908676
Alignment:
Q  301 atctacaggtcttctctctacatcccaaaccacctaagcctagtttcca 349  Q
    |||||||||||||||||||| || |||||||| ||||| ||||||||||    
T  5908723 atctacaggtcttctctctatat-ccaaaccaactaagtctagtttcca 5908676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 7046400 - 7046352
Alignment:
Q  312 ttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||| ||||||||| ||||||| || |||||||||||||||    
T  7046400 ttctctctacatgcccaaaccagctaagccgaggttccaccatcttttc 7046352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 23023313 - 23023261
Alignment:
Q  308 ggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||   ||||| ||||||||||||||||| ||||||||||    
T  23023313 ggtcttctctctacataatcaaactacctaagcctagtttcccccatcttttc 23023261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 39946935 - 39946875
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| |||||||  |||||||| ||||||||| |||| |||| ||||||    
T  39946935 catctacaggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttc 39946875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 40813402 - 40813342
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||| |||||||||||||| ||||||||| |||| |||| |||| |||| ||||||    
T  40813402 catctacagatcttctctctacatgcccaaaccatctaaacctattttctaccaacttttc 40813342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 42469767 - 42469819
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||  ||||  ||||||||||||||| ||||||    
T  42469767 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatcca 42469819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 41948587 - 41948534
Alignment:
Q  307 aggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  41948587 aggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttc 41948534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 6420695 - 6420747
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccacca 352  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  6420695 atctacaagtcttctctctacatgcccaaaccacctaagcctagtttccacca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 12966092 - 12966040
Alignment:
Q  308 ggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  12966092 ggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttc 12966040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 42187564 - 42187488
Alignment:
Q  284 actctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| |||| | ||| ||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  42187564 actctccttactacataatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttc 42187488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 19262638 - 19262697
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  19262638 atctacaggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttc 19262697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 25579282 - 25579341
Alignment:
Q  301 atctacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  25579282 atctacatgtcttctctctacatccccaaaccacctaagcctattttccaccattttttc 25579341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 36101970 - 36102029
Alignment:
Q  301 atctacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||| |||||| |||||||||    
T  36101970 atctataggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttc 36102029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 24549905 - 24549955
Alignment:
Q  308 ggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttt 357  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  24549905 ggtcttctctctacatgcccaaaccacctaagcctagtttccatcatcttt 24549955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 28021032 - 28020982
Alignment:
Q  310 tcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttc 28020982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 47848773 - 47848692
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||||| ||  || |||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  47848773 gatctactctccttagtacagaatttacaagtcttctctcgacatgcccaaaccacctaagcctattttccaccatcttttc 47848692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 35713769 - 35713713
Alignment:
Q  304 tacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||||    
T  35713769 tacaagtcttctctctacatgcccaaaccacctaagcctattttccaccattttttc 35713713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 38135417 - 38135476
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||| |||||||| |||||||  |||||||||||||||||| ||||||||||||||||    
T  38135417 atctactggtcttctgtctacatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 38920859 - 38920812
Alignment:
Q  313 tctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttc 38920812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 40169718 - 40169667
Alignment:
Q  309 gtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  40169718 gtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttc 40169667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 27021906 - 27021956
Alignment:
Q  310 tcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttc 27021956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 28628116 - 28628197
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| | ||| |||||||||| |||||| ||||| ||||||||||||||||| | ||||||||||| ||||    
T  28628116 gatctactctccttactacataatctacaggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttc 28628197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 48202907 - 48202960
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccat 353  Q
    ||||||| ||||||||||||||| | |||||||||||||||||| |||||||||    
T  48202907 atctacaagtcttctctctacatgcgcaaaccacctaagcctagattccaccat 48202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 7220818 - 7220762
Alignment:
Q  304 tacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||| | |||||||||    
T  7220818 tacacgtcttctctctacatgcccaaaccacctaagccaagtttctatcatcttttc 7220762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 7273117 - 7273057
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||| |||| |||| ||||||    
T  7273117 catctacaggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttc 7273057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 12841479 - 12841539
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  12841479 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 12841539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 13859212 - 13859272
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  13859212 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 13859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 26741930 - 26741986
Alignment:
Q  228 tggttacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||| |||||||||||||||||| ||||  ||| ||||||||||||| ||||    
T  26741930 tggttacattgatcaaattacgccataatgttctatcataaaccatatttcggtcca 26741986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 31682806 - 31682866
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  31682806 catctacgggtcttctctctacatacccaaaccatctaagcctattttctaccaacttttc 31682866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 34926562 - 34926614
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||| | ||||  ||| ||||||||||||||||||    
T  34926562 tacatggatcaaattacgccattaagttctatcataaaccatatttcgatcca 34926614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 35906405 - 35906465
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  35906405 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 35906465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 44855376 - 44855436
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  44855376 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 44855436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 49029354 - 49029294
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  49029354 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 49029294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 1740854 - 1740819
Alignment:
Q  324 cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||||||||| |||||    
T  1740854 cccaaaccacctaagcctagtttccaccatattttc 1740819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 36514424 - 36514471
Alignment:
Q  313 tctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  36514424 tctctctacatgcccaaaccacctaagtctagtttctaccatcttttc 36514471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 18605351 - 18605409
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||| ||||||||||||||| | |||||||||||||  ||||||| ||||||||||    
T  18605351 atctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatctttt 18605409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 18637639 - 18637581
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||| ||||||||||||||| | |||||||||||||  ||||||| ||||||||||    
T  18637639 atctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatctttt 18637581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 18651073 - 18651015
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||| ||||||||||||||| | |||||||||||||  ||||||| ||||||||||    
T  18651073 atctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatctttt 18651015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 5335993 - 5335940
Alignment:
Q  305 acaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttt 357  Q
    |||| ||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  5335993 acagttcttctctctatatgcccaaaccacctaagtctagtttcgaccatcttt 5335940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 30200174 - 30200227
Alignment:
Q  307 aggtcttctctctacatcccaaac-cacctaagcctagtttccaccatcttttc 359  Q
    ||||||||| | ||||| |||||  |||||||||||||||||||||||||||||    
T  30200174 aggtcttctatttacatgccaaaatcacctaagcctagtttccaccatcttttc 30200227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 40008636 - 40008681
Alignment:
Q  315 tctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||    
T  40008636 tctctacatgcccaaaccacctaatccgagtttccaccatcttttc 40008681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 43491386 - 43491333
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccacca 352  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  43491386 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctacca 43491333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 6374946 - 6374886
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| | ||||||| ||||||||| |||| |||| ||||||    
T  6374946 catctactggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttc 6374886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 7189442 - 7189490
Alignment:
Q  312 ttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||| |||||||||||||||| || |||| |||||||||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttc 7189490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 9210744 - 9210796
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| |||   ||| ||||||||||| ||||||    
T  9210744 tacatggatcaaattacgccataatgttgtatcataaaccatatttggatcca 9210796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 28542124 - 28542160
Alignment:
Q  323 tcccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  28542124 tcccaaaccacctaaggctattttccaccatcttttc 28542160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 31005301 - 31005241
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| |||| |||| |||| |||| ||||||    
T  31005301 catctacgggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttc 31005241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 32631806 - 32631754
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||| |||||||| |||||||| |||||  ||||||||||||||| ||||||    
T  32631806 tacatagatcaaatgacgccatagcgttctatcaaaaaccatatttggatcca 32631754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 33073030 - 33072970
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| |||||| || ||||||||| |||| |||| ||||||    
T  33073030 catctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttc 33072970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 347
Target Start/End: Original strand, 33350010 - 33350058
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttc 347  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| ||||    
T  33350010 catctacgggtcttctctctacatgcccaaaccatctaagcctattttc 33350058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 36101817 - 36101869
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||| ||||| ||||  ||| ||||||||||| ||||||    
T  36101817 tacatggatcaaattacgtcataatgttctatcataaaccatattttgatcca 36101869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 36239836 - 36239888
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| ||| ||||||| ||||||    
T  36239836 tacatggatcaaattacgccataatgttctatcataaagcatatttggatcca 36239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 40979968 - 40980020
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||  ||||  ||| ||||||||||| ||||||    
T  40979968 tacatggatcaaattacgccatagtgttctatcataaaccatatttggatcca 40980020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 43281752 - 43281692
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  43281752 catctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 43281692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 43281916 - 43281864
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||  ||||  ||||||||||||||| ||||||    
T  43281916 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatcca 43281864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 45836684 - 45836744
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  45836684 catctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttc 45836744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 9593889 - 9593970
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| | || |||||||| ||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  9593889 gatctactcttcttactacagcatctacatgtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttc 9593970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 33084131 - 33084076
Alignment:
Q  305 acaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  33084131 acaggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttc 33084076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 6293574 - 6293649
Alignment:
Q  284 actctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatctttt 358  Q
    ||||| |||| | ||| |||||||||| |||||||||||| |||||||||||| | ||||||||||||||| ||||    
T  6293574 actctccttattacataatctacaggtgttctctctacatgcccaaaccacctgaacctagtttccaccatatttt 6293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 24665887 - 24665828
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||| ||||| |||||    
T  24665887 atctacaggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttc 24665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 34545 - 34597
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||||||| ||||  ||| |||||||||||| |||||    
T  34545 tacatggatcaaattacgccataatgttctatcataaaccatatttcaatcca 34597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 2079434 - 2079358
Alignment:
Q  284 actctacttagtgcatcatctacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| |||| | ||| |||||||  |||||||||||||| || ||||||| |||||||| ||||||||||||||||    
T  2079434 actctccttactacataatctacaaatcttctctctacatacctaaaccacttaagcctattttccaccatcttttc 2079358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 9749429 - 9749488
Alignment:
Q  301 atctacaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| | |||||||||||||||| ||||||||||| || |||||||||| |||||||    
T  9749429 atctacatgacttctctctacatccctaaaccacctaaaccaagtttccaccttcttttc 9749488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 43266 - 43316
Alignment:
Q  310 tcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||| |||||    
T  43266 tcttctctctacatggccagaccacctaagcctagtttccaccattttttc 43316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 33997747 - 33997801
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatc 354  Q
    ||||| ||||||||  ||||||| |||||||||||||||| ||||||||||||||    
T  33997747 atctataggtcttccttctacatgcccaaaccacctaagcttagtttccaccatc 33997801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 9568938 - 9568889
Alignment:
Q  235 atggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||| ||||||    
T  9568938 atggatcaaattacgccataacggtctatcataaaccatatttggatcca 9568889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 608235 - 608187
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttc 347  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| ||||    
T  608235 catctacaggtcttctctctacatgtccaaaccatctaagcctattttc 608187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 5096076 - 5096024
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||| |||||||||||||||||| ||||  ||| ||||||||||| ||||||    
T  5096076 tacatagatcaaattacgccataatgttctatcataaaccatattttgatcca 5096024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 41192913 - 41192854
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||||||| | |||| |||||||| ||||||||||||||||||||    
T  41192913 atctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttc 41192854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 46715585 - 46715636
Alignment:
Q  309 gtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  46715585 gtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttc 46715636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 50471599 - 50471544
Alignment:
Q  305 acaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  50471599 acaggtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttc 50471544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 51252674 - 51252725
Alignment:
Q  309 gtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  51252674 gtcttctctctacatgcccataccacctaagcctagtttccaccatcttttc 51252725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 47611798 - 47611745
Alignment:
Q  307 aggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  47611798 aggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttc 47611745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 50662465 - 50662405
Alignment:
Q  301 atctacaggtcttctctctacatccc--aaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||| ||  |||||||||||||||| ||||||||||||||||    
T  50662465 atctacaagtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttc 50662405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 20605423 - 20605375
Alignment:
Q  228 tggttacatggatcaaattacgccataacgttcggtcaaaaaccatatt 276  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  20605423 tggttacatgaatcaaattacgccataacgttcgatcataaaccatatt 20605375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 28236261 - 28236201
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||| ||||||    
T  28236261 catctacaagtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttc 28236201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 54470281 - 54470225
Alignment:
Q  304 tacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  54470281 tacatgtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttc 54470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 29398895 - 29398836
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||| ||||||||||||||||| |||||||||| ||||| || ||||||||||||||||    
T  29398895 atctataggtcttctctctacatgcccaaaccacataagcatattttccaccatcttttc 29398836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 35555856 - 35555911
Alignment:
Q  305 acaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||| || ||||||||||||||| |||||||| |||||||||||    
T  35555856 acaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttc 35555911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 42285909 - 42285964
Alignment:
Q  305 acaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||    
T  42285909 acaggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttc 42285964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 42639233 - 42639284
Alignment:
Q  309 gtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  42639233 gtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttc 42639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 44860923 - 44860864
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||| |||||||| ||||| ||||||||| |||||||| |||||||||||||||||    
T  44860923 atctacagctcttctctatacatgcccaaaccatctaagcctggtttccaccatcttttc 44860864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 38570960 - 38571010
Alignment:
Q  309 gtcttctctctacat-cccaaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||||||    
T  38570960 gtcttctttctacatgcccaaaccacctaagcctagtttccactatctttt 38571010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 28497588 - 28497508
Alignment:
Q  279 gatccactctacttagtgcatcatctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||| |||| | ||| ||||||| ||||||||||||||| ||||||||||||||||||  ||||||| ||||||||    
T  28497588 gatctactctccttactacataatctacaagtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttc 28497508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 357
Target Start/End: Original strand, 40268468 - 40268525
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttt 357  Q
    ||||||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||    
T  40268468 atctacaggtcttctctctacatgcccaagccaccaaagccgagttcccaccatcttt 40268525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 50680817 - 50680757
Alignment:
Q  301 atctacaggtcttctctctacatccca--aaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| | ||||||||||||| |||  ||||||||||||||| ||||||||||||||||    
T  50680817 atctacaagccttctctctacatgccataaaccacctaagcctattttccaccatcttttc 50680757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 436307 - 436247
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||| |||||| || ||||||||| |||| |||| ||||||    
T  436307 catctacaggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttc 436247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 284
Target Start/End: Original strand, 2557672 - 2557764
Alignment:
Q  193 caacaacaaccaagccttaatgcactacatagtggtggttacatggatcaaattacgcc-ataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||||||||   ||||| || | | ||| ||||||||||||||||| || |||| ||||  ||| ||||||||||||||||||    
T  2557672 caacaacaaccaagccttatcccactaaatggagttggctacatggatcaaattacaccaataatgttctatcataaaccatatttcgatcca 2557764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 31403223 - 31403275
Alignment:
Q  301 atctacaggtcttctctctacatcccaaaccacctaagcctagtttccaccat 353  Q
    |||| ||||| |||||| ||||| || ||||||||||||||||||||||||||    
T  31403223 atcttcaggtgttctctttacatgcccaaccacctaagcctagtttccaccat 31403275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 31960018 - 31960078
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  31960018 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 31960078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 43434002 - 43433942
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  43434002 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 43433942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 52569719 - 52569779
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  52569719 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 52569779  T

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Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 53707872 - 53707812
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  53707872 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 53707812  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 1427493 - 1427548
Alignment:
Q  305 acaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||| | ||||||| |||||||||||||||||||| |||||    
T  1427493 acaggtcctctctctacatgctcaaaccatctaagcctagtttccaccatgttttc 1427548  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 22420919 - 22420978
Alignment:
Q  301 atctacaggtcttctctctacatc-ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||| ||||||||||||||  ||||| ||||||||||||| |||||||||||||||    
T  22420919 atcttcagatcttctctctacatgtccaaatcacctaagcctagcttccaccatcttttc 22420978  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 33709997 - 33709942
Alignment:
Q  305 acaggtcttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| ||||||||| |||| || ||||||||||| |||||||||||||||||||||    
T  33709997 acagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttc 33709942  T

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Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 38903925 - 38903984
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||| |||| | ||||||| ||||||| ||||||||||||||||||    
T  38903925 atctacaagtcttctctccacatgctcaaaccaactaagccgagtttccaccatcttttc 38903984  T

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Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 42293454 - 42293513
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||| ||| ||||||| ||||||||||||||||| |||||||| |||||||||    
T  42293454 atctacatgtcgtctttctacatacccaaaccacctaagccgagtttccatcatcttttc 42293513  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 53518524 - 53518567
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagccta 342  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  53518524 catccacaggtcttctctctacatacccaaaccacctaagccta 53518567  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 25257790 - 25257844
Alignment:
Q  305 acaggtcttctctctacatcc-caaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||||||||||||||| | ||||||||||||| |||| ||| ||||||||||    
T  25257790 acaggtcttctctctacatgctcaaaccacctaagtctagcttctaccatctttt 25257844  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 31459098 - 31459048
Alignment:
Q  310 tcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||| ||||| ||||||||||||||||||| |||| |||||||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttc 31459048  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 49987480 - 49987446
Alignment:
Q  325 ccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||| ||||||||||||||||    
T  49987480 ccaaaccacctaagcctattttccaccatcttttc 49987446  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 5306535 - 5306486
Alignment:
Q  235 atggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||||||||||||||| |||  |||| ||||||||||| ||||||    
T  5306535 atggatcaaattacgccataatgttatgtcataaaccatatttggatcca 5306486  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 20999070 - 20999037
Alignment:
Q  326 caaaccacctaagcctagtttccaccatcttttc 359  Q
    |||| |||||||||||||||||||||||||||||    
T  20999070 caaaacacctaagcctagtttccaccatcttttc 20999037  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 31339613 - 31339560
Alignment:
Q  301 atctacaggtcttctctctacatcc-caaaccacctaagcctagtttccaccat 353  Q
    ||||||| ||||||||||||||| | |||||||||||||| ||||||| |||||    
T  31339613 atctacaagtcttctctctacatgctcaaaccacctaagcttagtttcgaccat 31339560  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 45094371 - 45094424
Alignment:
Q  307 aggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||| |||||||| ||||||||||||||||| ||||| ||||||| ||||    
T  45094371 aggtcttccctctacatgcccaaaccacctaagccgagttttcaccatcctttc 45094424  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 2589056 - 2589008
Alignment:
Q  312 ttctctctacatccc-aaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||| || |||||||||||| |||||||| |||||||||||    
T  2589056 ttctctctacatgcctaaaccacctaagtctagtttctaccatcttttc 2589008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 4440931 - 4440871
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||| || ||||||||| ||||||||| |||| |||| ||||||    
T  4440931 catctacgggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttc 4440871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 13805470 - 13805510
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcc 340  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  13805470 atctaaaggtcttctctctacatacccaaaccacctaagcc 13805510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 20601850 - 20601910
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||||||||||||||||||||| | ||||||| |||| |||| |||| |||| ||||||    
T  20601850 catctacaggtcttctctctacatgcacaaaccatctaatcctattttctaccaacttttc 20601910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 25575066 - 25575014
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||||||||||| ||| || ||||  ||| ||||||||||||||||||    
T  25575066 tacatggatcaaattacaccacaatgttctatcataaaccatatttcgatcca 25575014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 30853426 - 30853378
Alignment:
Q  309 gtcttctctctacat-cccaaaccacctaagcctagtttccaccatctt 356  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| |||||    
T  30853426 gtcttctctctacatgcccaaaccacctaagctgagtttccactatctt 30853378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 32479280 - 32479228
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    |||||||||||||| ||||||||  ||||  ||||||||||||||| ||||||    
T  32479280 tacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatcca 32479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 33227287 - 33227227
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||| | ||||||||| |||| |||| ||||||    
T  33227287 catctacgggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttc 33227227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 34208309 - 34208361
Alignment:
Q  232 tacatggatcaaattacgccataacgttcggtcaaaaaccatatttcgatcca 284  Q
    ||||||||||||||| |||||||| ||||  ||| ||||||||||| ||||||    
T  34208309 tacatggatcaaattgcgccataatgttctatcataaaccatatttggatcca 34208361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 45176083 - 45176043
Alignment:
Q  301 atctacaggtcttctctctacat-cccaaaccacctaagcc 340  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  45176083 atctacaagtcttctctctacatgcccaaaccacctaagcc 45176043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 48174297 - 48174357
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| |||||| || ||||||||| |||| |||| ||||||    
T  48174297 catctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttc 48174357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 56225133 - 56225085
Alignment:
Q  311 cttctctctacatcc-caaaccacctaagcctagtttccaccatctttt 358  Q
    ||||||||||||| | ||||||||||||||||| |||| ||||||||||    
T  56225133 cttctctctacatactcaaaccacctaagcctattttctaccatctttt 56225085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 56375368 - 56375308
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||  |||| |||| ||||||    
T  56375368 catctacgggtcttctctctacatgcccaaaccatctaagcctgttttctaccaacttttc 56375308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 44079 - 44132
Alignment:
Q  307 aggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  44079 aggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttc 44132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 31546 - 31486
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||    
T  31546 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttc 31486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 11873 - 11816
Alignment:
Q  303 ctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    |||||| |||||||||||||| ||||||||||||||||| |||| | |||||||||||    
T  11873 ctacagatcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttc 11816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 1152 - 1212
Alignment:
Q  300 catctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccatcttttc 359  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||| |||| ||||||    
T  1152 catctacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttc 1212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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