View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17205_low_20 (Length: 207)
Name: NF17205_low_20
Description: NF17205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17205_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 38264689 - 38264880
Alignment:
| Q |
1 |
tcgacaaccagacttctgtgctgcgatgtgagcaggatcgttggaatactttgtcgtggttaaaatcgtgattttccagtgggatcgtaggattgtgtgt |
100 |
Q |
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| T |
38264689 |
tcgacaaccagacttctgtgctgcgatgtgagcaggatcgttggaatactttgtcgtggttaaaatcgtgattttccagtgggatcgtaggattgtgtgt |
38264788 |
T |
|
| Q |
101 |
gtggatagatgcaggtcaggttttggttatatgacatgtttggtttgcgccaatgactactgcactcgtgctgccatctgactctccctttt |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38264789 |
gtggatagatgcaggtcaggttttggttatatgacatgtttggtttgcgccaatgactactgcactcgtgctgccatctgactctccctttt |
38264880 |
T |
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