View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17206_low_7 (Length: 263)
Name: NF17206_low_7
Description: NF17206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17206_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 4544892 - 4545052
Alignment:
| Q |
1 |
atattggtagcaaatgttatattttcttgtagtgtagagagcagtacaagccaaaatgtcaaagacgagcttctttgcatgaactcactaagaagggaca |
100 |
Q |
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| T |
4544892 |
atattggtagcaaatgttatattttcttgtagtgtagagagcagtacaagccaaaatgtcaaagacgagcttctttgcatgaactcactaagaagggact |
4544991 |
T |
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| Q |
101 |
aataattattgcataatgaagaaataagtaaagccatgttgtaccatagaaactctgcata |
161 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4544992 |
aataattattgcataatgaagaaataagtaaagccatgttgtaccatagaaactctgcata |
4545052 |
T |
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