View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17207_high_4 (Length: 315)
Name: NF17207_high_4
Description: NF17207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17207_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 26587258 - 26587559
Alignment:
| Q |
1 |
cctataattgacatatctttccgtgacaacaacacctactaaaagataagtagcctacaagcatcaaagaaaaataaagtgatgccttgtgattgctact |
100 |
Q |
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| T |
26587258 |
cctataattgacatatctttccgtgacaacaacacctactaaaagataagtagcctacaagcatcaaagaaaaataaagtgatgccttgtgattgctact |
26587357 |
T |
|
| Q |
101 |
catattttatttgggtaatcaccacctaagtgtgaaaaggattaacaaccaaccgtagctcttattacattctatatttttgtattaatcatttgtatta |
200 |
Q |
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| T |
26587358 |
catattttatttgggtaatcaccacctaagtgtgaaaaggattaacaaccaaccgtagctcttattacattctatatttttgtattaatcatttgtatta |
26587457 |
T |
|
| Q |
201 |
ttataactaggatacaattatgttctatttgttattatagcaaagacccaccagttccctccaaaacaaaaccaaattttacaaatttcaattgagaata |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
26587458 |
ttataactaggatacaattatgttctatttgttattatagcaaagacccaccagttccctccaaaacaaaaccaaatttcacaaatttcaattgagaata |
26587557 |
T |
|
| Q |
301 |
tt |
302 |
Q |
| |
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|| |
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| T |
26587558 |
tt |
26587559 |
T |
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