View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17209_high_38 (Length: 348)

Name: NF17209_high_38
Description: NF17209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17209_high_38
NF17209_high_38
[»] chr2 (37 HSPs)
chr2 (13-329)||(16903092-16903408)
chr2 (10-97)||(4386960-4387047)
chr2 (10-100)||(7716667-7716757)
chr2 (10-96)||(9224266-9224352)
chr2 (10-97)||(28223787-28223874)
chr2 (10-96)||(20244171-20244257)
chr2 (10-88)||(3595254-3595332)
chr2 (10-96)||(16571118-16571204)
chr2 (10-88)||(28224388-28224466)
chr2 (13-98)||(6849545-6849630)
chr2 (13-88)||(6849296-6849371)
chr2 (10-96)||(7583793-7583879)
chr2 (10-88)||(7717285-7717362)
chr2 (10-88)||(10883295-10883373)
chr2 (10-88)||(11256124-11256202)
chr2 (10-88)||(16887591-16887669)
chr2 (10-103)||(11256740-11256833)
chr2 (10-93)||(8113300-8113383)
chr2 (10-97)||(30161932-30162019)
chr2 (10-88)||(7583140-7583218)
chr2 (10-88)||(39477325-39477403)
chr2 (10-99)||(40165870-40165959)
chr2 (10-97)||(3595895-3595982)
chr2 (13-96)||(8963504-8963587)
chr2 (10-88)||(16571726-16571804)
chr2 (10-96)||(33847873-33847959)
chr2 (22-88)||(8112688-8112754)
chr2 (13-87)||(40166846-40166920)
chr2 (10-67)||(20243582-20243639)
chr2 (10-61)||(467140-467191)
chr2 (10-45)||(17918685-17918720)
chr2 (10-73)||(39476538-39476601)
chr2 (47-97)||(12206787-12206837)
chr2 (29-88)||(4386363-4386422)
chr2 (10-52)||(17918065-17918107)
chr2 (47-96)||(9958740-9958789)
chr2 (48-97)||(18949908-18949957)
[»] chr3 (42 HSPs)
chr3 (10-97)||(50687708-50687795)
chr3 (10-96)||(3944895-3944981)
chr3 (10-96)||(25025174-25025260)
chr3 (10-96)||(23584883-23584969)
chr3 (10-96)||(23599706-23599792)
chr3 (10-88)||(25025764-25025842)
chr3 (10-88)||(44868618-44868696)
chr3 (10-96)||(48219235-48219321)
chr3 (10-98)||(37373963-37374051)
chr3 (10-98)||(55282421-55282508)
chr3 (10-97)||(32672165-32672252)
chr3 (10-88)||(29342349-29342427)
chr3 (10-88)||(31014345-31014423)
chr3 (10-97)||(31014924-31015011)
chr3 (10-96)||(42356233-42356322)
chr3 (13-96)||(50675128-50675211)
chr3 (10-88)||(8427743-8427821)
chr3 (10-88)||(23584245-23584323)
chr3 (10-88)||(23599068-23599146)
chr3 (10-96)||(44868007-44868093)
chr3 (10-88)||(55281843-55281921)
chr3 (10-85)||(37375468-37375543)
chr3 (21-88)||(41459138-41459204)
chr3 (10-96)||(19555270-19555356)
chr3 (10-88)||(24220587-24220665)
chr3 (10-96)||(37374820-37374901)
chr3 (46-98)||(41040569-41040621)
chr3 (10-58)||(43658895-43658943)
chr3 (10-66)||(47737673-47737729)
chr3 (10-52)||(29342993-29343035)
chr3 (10-60)||(41875616-41875666)
chr3 (10-88)||(48218599-48218677)
chr3 (13-53)||(37374609-37374649)
chr3 (10-58)||(38575059-38575107)
chr3 (10-45)||(19555923-19555958)
chr3 (10-45)||(49752324-49752359)
chr3 (13-60)||(49752913-49752960)
chr3 (10-52)||(38575642-38575684)
chr3 (10-44)||(40887941-40887975)
chr3 (18-88)||(43658263-43658332)
chr3 (10-71)||(43103924-43103985)
chr3 (16-57)||(50687141-50687182)
[»] chr4 (48 HSPs)
chr4 (10-98)||(40847675-40847763)
chr4 (10-96)||(199226-199312)
chr4 (10-98)||(55815823-55815911)
chr4 (10-97)||(25370392-25370479)
chr4 (10-97)||(52597711-52597798)
chr4 (10-96)||(2713843-2713929)
chr4 (10-96)||(12639965-12640051)
chr4 (10-95)||(26424404-26424489)
chr4 (13-97)||(388752-388836)
chr4 (10-90)||(40344509-40344589)
chr4 (10-97)||(20422731-20422818)
chr4 (10-97)||(48091095-48091182)
chr4 (10-88)||(20075533-20075611)
chr4 (10-96)||(31876788-31876874)
chr4 (10-88)||(55816450-55816528)
chr4 (11-88)||(26423767-26423844)
chr4 (11-96)||(33569720-33569805)
chr4 (10-103)||(37567474-37567567)
chr4 (10-97)||(32291014-32291101)
chr4 (10-88)||(199007-199085)
chr4 (10-88)||(36945223-36945301)
chr4 (10-88)||(40848130-40848208)
chr4 (10-88)||(52597498-52597576)
chr4 (13-88)||(12640589-12640664)
chr4 (13-88)||(48782077-48782152)
chr4 (10-88)||(389405-389483)
chr4 (10-88)||(25369791-25369869)
chr4 (10-88)||(28223571-28223649)
chr4 (10-96)||(29809087-29809173)
chr4 (10-88)||(36111217-36111294)
chr4 (11-88)||(48090474-48090551)
chr4 (10-98)||(36944608-36944696)
chr4 (13-88)||(40345133-40345208)
chr4 (10-95)||(32901852-32901937)
chr4 (10-88)||(32902465-32902543)
chr4 (10-57)||(20076186-20076233)
chr4 (22-88)||(20422139-20422205)
chr4 (10-88)||(35427254-35427331)
chr4 (19-96)||(47321759-47321836)
chr4 (10-96)||(6862647-6862733)
chr4 (13-78)||(31877435-31877500)
chr4 (11-52)||(47328397-47328438)
chr4 (10-58)||(37566941-37566989)
chr4 (10-61)||(3708808-3708859)
chr4 (55-97)||(18501738-18501780)
chr4 (48-98)||(35428238-35428288)
chr4 (46-96)||(55011746-55011796)
chr4 (13-45)||(31842726-31842758)
[»] chr8 (35 HSPs)
chr8 (10-97)||(39852153-39852240)
chr8 (10-96)||(7818474-7818560)
chr8 (10-96)||(33114188-33114274)
chr8 (10-88)||(16880518-16880596)
chr8 (10-96)||(16889195-16889281)
chr8 (10-88)||(7819097-7819175)
chr8 (10-96)||(11999080-11999166)
chr8 (10-96)||(35237259-35237345)
chr8 (10-96)||(43591616-43591702)
chr8 (10-99)||(43480613-43480702)
chr8 (10-88)||(11998464-11998542)
chr8 (10-96)||(16879888-16879974)
chr8 (10-86)||(33113585-33113661)
chr8 (13-96)||(4374995-4375078)
chr8 (10-88)||(16889828-16889905)
chr8 (10-88)||(36848197-36848275)
chr8 (10-88)||(39852803-39852881)
chr8 (10-88)||(40907607-40907684)
chr8 (10-88)||(43591015-43591093)
chr8 (10-88)||(44061993-44062071)
chr8 (10-91)||(10806437-10806518)
chr8 (11-88)||(35237865-35237941)
chr8 (10-103)||(30115354-30115453)
chr8 (13-88)||(38778798-38778873)
chr8 (10-97)||(40309500-40309587)
chr8 (13-88)||(43481284-43481359)
chr8 (10-88)||(30115996-30116074)
chr8 (10-67)||(2209035-2209092)
chr8 (10-66)||(38778184-38778240)
chr8 (13-96)||(44062599-44062682)
chr8 (10-58)||(4374301-4374349)
chr8 (54-98)||(37532574-37532618)
chr8 (10-53)||(10805991-10806034)
chr8 (10-88)||(4373694-4373772)
chr8 (55-96)||(41761799-41761840)
[»] chr6 (13 HSPs)
chr6 (10-97)||(6032753-6032840)
chr6 (10-96)||(5523846-5523932)
chr6 (10-104)||(33668213-33668307)
chr6 (10-97)||(30611345-30611432)
chr6 (10-88)||(6032166-6032244)
chr6 (10-96)||(13936640-13936726)
chr6 (10-95)||(12809702-12809787)
chr6 (10-88)||(5523208-5523286)
chr6 (10-88)||(12809077-12809155)
chr6 (10-96)||(31723833-31723919)
chr6 (10-97)||(33648163-33648250)
chr6 (10-88)||(13944298-13944376)
chr6 (10-84)||(30610723-30610797)
[»] chr5 (19 HSPs)
chr5 (10-96)||(3957500-3957586)
chr5 (10-96)||(5324403-5324489)
chr5 (13-96)||(4929509-4929592)
chr5 (10-96)||(33430043-33430128)
chr5 (10-96)||(8813683-8813769)
chr5 (10-88)||(26687508-26687586)
chr5 (10-88)||(26957239-26957317)
chr5 (13-88)||(3958137-3958212)
chr5 (10-88)||(3739663-3739741)
chr5 (10-98)||(28075969-28076057)
chr5 (10-88)||(4928879-4928957)
chr5 (10-52)||(42408565-42408607)
chr5 (10-88)||(21770002-21770084)
chr5 (10-53)||(13738103-13738146)
chr5 (10-98)||(26688057-26688137)
chr5 (10-98)||(26957788-26957868)
chr5 (46-96)||(39149467-39149517)
chr5 (10-58)||(3739038-3739086)
chr5 (10-66)||(42408022-42408078)
[»] scaffold0229 (1 HSPs)
scaffold0229 (10-98)||(15233-15321)
[»] chr7 (29 HSPs)
chr7 (10-98)||(27855564-27855651)
chr7 (10-97)||(36682834-36682921)
chr7 (10-98)||(46732565-46732653)
chr7 (10-93)||(4895082-4895165)
chr7 (10-88)||(24044043-24044121)
chr7 (10-88)||(47814635-47814713)
chr7 (10-97)||(34853996-34854083)
chr7 (13-88)||(36683467-36683542)
chr7 (10-97)||(47813970-47814057)
chr7 (10-88)||(30711796-30711874)
chr7 (10-88)||(34853399-34853477)
chr7 (10-96)||(42455921-42456007)
chr7 (10-96)||(46815062-46815147)
chr7 (13-88)||(42456519-42456594)
chr7 (10-88)||(19816272-19816350)
chr7 (13-98)||(19816895-19816980)
chr7 (13-90)||(22276079-22276156)
chr7 (10-85)||(46814416-46814491)
chr7 (10-80)||(4894515-4894585)
chr7 (10-88)||(22275433-22275510)
chr7 (10-73)||(32499872-32499935)
chr7 (10-88)||(24323982-24324059)
chr7 (10-91)||(33805974-33806055)
chr7 (10-58)||(32499287-32499335)
chr7 (10-53)||(18520900-18520943)
chr7 (13-97)||(36620117-36620201)
chr7 (13-50)||(36620743-36620780)
chr7 (46-98)||(85085-85137)
chr7 (13-45)||(46012943-46012975)
[»] chr1 (28 HSPs)
chr1 (10-98)||(1403038-1403126)
chr1 (10-96)||(6288204-6288290)
chr1 (10-88)||(43368835-43368913)
chr1 (10-97)||(42838936-42839023)
chr1 (10-97)||(49534396-49534483)
chr1 (10-96)||(8560156-8560242)
chr1 (12-94)||(27817006-27817088)
chr1 (10-83)||(51248483-51248556)
chr1 (10-97)||(27797736-27797823)
chr1 (10-88)||(1403688-1403765)
chr1 (10-88)||(8560743-8560820)
chr1 (10-88)||(42839709-42839787)
chr1 (10-88)||(52859788-52859866)
chr1 (10-82)||(42839548-42839620)
chr1 (10-88)||(7219648-7219725)
chr1 (10-96)||(7782691-7782777)
chr1 (10-88)||(27797125-27797203)
chr1 (10-88)||(49533751-49533829)
chr1 (10-83)||(43368203-43368276)
chr1 (10-88)||(41563187-41563265)
chr1 (10-88)||(48843588-48843666)
chr1 (10-51)||(41563792-41563833)
chr1 (10-58)||(48843962-48844010)
chr1 (10-52)||(37725423-37725465)
chr1 (10-58)||(6287658-6287706)
chr1 (13-85)||(42840316-42840388)
chr1 (10-53)||(48369525-48369568)
chr1 (170-316)||(10447497-10447642)
[»] scaffold0007 (1 HSPs)
scaffold0007 (10-97)||(11265-11351)
[»] scaffold0368 (1 HSPs)
scaffold0368 (10-97)||(11784-11871)
[»] scaffold1095 (1 HSPs)
scaffold1095 (10-88)||(1493-1571)


Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 329
Target Start/End: Original strand, 16903092 - 16903408
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctttatttaaaccnnnn 112  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||  |||| ||||| ||||||||||| ||||| ||| ||||||||||||        
T  16903092 aatatgttattcacttaatctaatcattgaatccaactttctcatggtggaaaaggattaacctttcccatgtaaaatgtcacttttatttaaaccaaaa 16903191  T
Q  113 nnnccattggttttctcatcattttaaactaaaacttagtaatggaatttctcatcattttcttaatggttttgttattgtctccctcaatagcattttc 212  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||     
T  16903192 aaaccattggttttctcatcattttaaactaaaacttagtaatggaatttctcatcattttcttagtggttttgttattgtctccctcgatagcattttg 16903291  T
Q  213 tgcatacgattttttaatgtttgcacagcaatggccgagtactttttgtacttcatcaactagaaaaacagacaaatgcaaaccaaattatgagcatgga 312  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16903292 tgcatacgattttttaatgtttgcacaacaatggccgagtactttttgtacttcgtcaactagaaaaacagacaaatgcaaaccaaattatgagcatgga 16903391  T
Q  313 gtaacagactttcgaat 329  Q
    |||||| ||||||||||    
T  16903392 gtaacaaactttcgaat 16903408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 4386960 - 4387047
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| |||||||||||||||||||||||    
T  4386960 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacct 4387047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 7716757 - 7716667
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccaccttta 100  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| |||||  |||||||||||||||||||||||||    
T  7716757 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttcccatgtgaaatgccaccttta 7716667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 9224352 - 9224266
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  9224352 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 9224266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 28223874 - 28223787
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| |||||||  |||||| ||||| ||||| |||||||||||||||||||||||    
T  28223874 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaaggattaacctttcccatgtgaaatgccacct 28223787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 20244171 - 20244257
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| ||||| ||||||||||||||||||||||    
T  20244171 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccacc 20244257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 3595332 - 3595254
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||| ||||||| ||||||||||| ||||||||||||||    
T  3595332 aagaatatgttcttcactttatctaatcattgaatccaactttcccatggtgggaaagaattaacctttcccatgtgaa 3595254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 16571204 - 16571118
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||| ||||    
T  16571204 aagaatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatggcacc 16571118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 28224388 - 28224466
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  28224388 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 28224466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 6849545 - 6849630
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| |||| |||||| ||||||||||||    
T  6849545 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtaaaatgccacctt 6849630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 6849371 - 6849296
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  6849371 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 6849296  T

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Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 7583793 - 7583879
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||| ||| ||| ||||  ||||| ||||||||||||||||||||||    
T  7583793 aagaatatgttcttcacttaagctaatcattgaatccaactttcccatagtgggaaaagattaacctttcccatgtgaaatgccacc 7583879  T

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Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7717285 - 7717362
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||| ||||| ||||||||||||||    
T  7717285 aagaatatgttcttcacttaatataatcattgaatc-aactttcccatggtgagaaaggattaacctttcccatgtgaa 7717362  T

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Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 10883373 - 10883295
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  10883373 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 10883295  T

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Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 11256202 - 11256124
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||  ||||| ||||||||||||||    
T  11256202 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgagaaatgattaacctttcccatgtgaa 11256124  T

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Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16887669 - 16887591
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| |||| || ||||||| ||||| ||||| ||||||||||||||    
T  16887669 aagaatatgttcttcacttaatctaatcattgaatccaactatcccatggtgggaaaggattaacctttcccatgtgaa 16887591  T

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Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 11256740 - 11256833
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctttattt 103  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||||||||  |||  ||||| |||| |||||| ||||||||||| |||||    
T  11256740 aagaatatattcttcacttaatctaatcattgaatccaactttctcatggtggaaaatgattaaccttttccatgtaaaatgccacctatattt 11256833  T

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Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 8113300 - 8113383
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgcc 93  Q
    ||||||||||||||||| ||||||||| || ||||| ||||||| |||||||  |||| ||||| |||||||||||||||||||    
T  8113300 aagaatatgttcttcacataatctaatcatcgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgcc 8113383  T

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Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 30162019 - 30161932
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  |||| || ||||| |||||  ||||||| ||||||||||||||    
T  30162019 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatgatgggaaaggattaacttttcccacgtgaaatgccacct 30161932  T

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Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 7583218 - 7583140
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||| ||||||||| |||||||| || |||||||||||| ||||| ||||| |||||| |||||||    
T  7583218 aagaatatgttcttcacctaatctaatcattgaatccaattttctcatggtgggaaaggattaacctttccgatgtgaa 7583140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 39477325 - 39477403
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||| ||||    
T  39477325 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatatgaa 39477403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 40165959 - 40165870
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccaccttt 99  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||| |||||||  |||  |||  |||||||||||||||||| |||||||    
T  40165959 aagaatatgttcttcacttaatccaatcattgaatccaactttcccatggtggaaaatgattggtctttcccatgtgaaatgtcaccttt 40165870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 3595895 - 3595982
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||  |||| ||| |||| |||||  |||||||||||||||| |||||    
T  3595895 aagaatatgtttttcacttaatctaatcattgaatccaacttttccatgatgaaaaaggattaacatttcccatgtgaaatgtcacct 3595982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 8963587 - 8963504
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||| ||||||||||||||| |||||||| ||||||| |||| |   |||| ||||| ||||||||||||||||||||||    
T  8963587 aatatgtttttcacttaatctaatcattgaatccaactttcccatgatagaaaaggattaacctttcccatgtgaaatgccacc 8963504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 16571726 - 16571804
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||| ||||||| |||||||| || |||| |||| || ||||| ||||| ||||||||||||||    
T  16571726 aagaatatgttcttcacttgatctaatcattgaatccaattttcccatgatgggaaaggattaacctttcccatgtgaa 16571804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 33847959 - 33847873
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||||||||||||||  ||||||| | ||||| |||||||  |||| |||   ||||||||||||||||||||||    
T  33847959 aagaatatgttcttcacttaatctaattgttgaatccatctttcccatggtggaaaaggattggcctttcccatgtgaaatgccacc 33847873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 8112754 - 8112688
Alignment:
Q  22 ttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||| |||||  |||| ||||||||    
T  8112754 ttcacttaatctaatcattgaatccaactttcccatggtgagaaaggattaacatttctcatgtgaa 8112688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 40166846 - 40166920
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtga 87  Q
    ||||||||||| |||||||||||| |||||||| || |||| ||||||| ||||| ||||| |||||| ||||||    
T  40166846 aatatgttcttgacttaatctaatcattgaatccaattttcccatggtgggaaaggattaacctttcctatgtga 40166920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 20243639 - 20243582
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaag 67  Q
    |||||||| |||||||||||||||||| |||||||| ||||||| ||||||| |||||    
T  20243639 aagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaag 20243582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 467191 - 467140
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtg 61  Q
    |||||||||||||||||||||| |||| |||||||| ||||||| |||||||    
T  467191 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtg 467140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 17918685 - 17918720
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatc 45  Q
    ||||||||||||||||||||||||||||||||||||    
T  17918685 aagaatatgttcttcacttaatctaataattgaatc 17918720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 39476601 - 39476538
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaa 73  Q
    |||||||| |||||||||||||||||| ||||||| |||||||| ||| ||| ||||| |||||    
T  39476601 aagaatatattcttcacttaatctaatcattgaattaaactttcccatagtgggaaaggattaa 39476538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 12206837 - 12206787
Alignment:
Q  47 aactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||| |||||    
T  12206837 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgtcacct 12206787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 4386422 - 4386363
Alignment:
Q  29 aatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||| |||||||| |||||||  |||||| ||||| ||||| ||||||||||||||    
T  4386422 aatctaatcattgaatccaactttcctatggtgggaaagtattaacctttcccatgtgaa 4386363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 17918107 - 17918065
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaacttt 52  Q
    |||||||| |||||||||||||||||| |||||||| ||||||    
T  17918107 aagaatatattcttcacttaatctaatcattgaatctaacttt 17918065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 9958740 - 9958789
Alignment:
Q  47 aactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||| |||||| ||||| ||| ||||||||||||| ||||||||||    
T  9958740 aactttcttatggtgggaaaggattgatctttcccatgttaaatgccacc 9958789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 18949957 - 18949908
Alignment:
Q  48 actttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    |||||| ||||||||||||  |||||  ||||||||||||||||||||||    
T  18949957 actttcccatggtgagaaaagattaacttttcccatgtgaaatgccacct 18949908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 50687708 - 50687795
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| |||||    
T  50687708 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaagaattaacctttcccatgtgaaatgtcacct 50687795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 3944981 - 3944895
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  3944981 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 3944895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 25025260 - 25025174
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||| ||||| ||||||||||||||||||||||    
T  25025260 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatgatgggaaaggattaacctttcccatgtgaaatgccacc 25025174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 23584883 - 23584969
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| ||||| ||||||||||||||||||||||    
T  23584883 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaaatgccacc 23584969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 23599706 - 23599792
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| ||||| ||||||||||||||||||||||    
T  23599706 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaaatgccacc 23599792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 25025764 - 25025842
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||| ||||| ||||||||||||||    
T  25025764 aagaatatgttcttctcttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatgtgaa 25025842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 44868618 - 44868696
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||| ||||| ||||||||||||||    
T  44868618 aagaatatgttcttcacttaatctaatcattgaatcaaattttcccatggtgggaaaggattaacctttcccatgtgaa 44868696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 48219235 - 48219321
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||| ||| |||||||||||||| |||||||| || |||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  48219235 aagaatatattcatcacttaatctaatcattgaatccaattttcccatggtgagaaagaattaacctttcccatgtaaaatgccacc 48219321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 37374051 - 37373963
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||||||||||||||||||| |||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||||| ||||||||||||    
T  37374051 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtaaaatgccacctt 37373963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 55282421 - 55282508
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||| ||||||| ||||| ||||| | ||||||||||||||||||||||    
T  55282421 aagaatatgttcttcacttaatctaatcattaaatccaactttcccatggtgggaaaggattaaac-ttcccatgtgaaatgccacctt 55282508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 32672252 - 32672165
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||| |||| || ||||| ||||| ||||||||||| |||||||||||    
T  32672252 aagaatatgttcttcacttaatctaatcattaaatccaactttcccatgttgggaaaggattaacctttcccatgtaaaatgccacct 32672165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 29342427 - 29342349
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||||||||    
T  29342427 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaa 29342349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 31014423 - 31014345
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  |||| ||||||||||| ||||||||    
T  31014423 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaatctttctcatgtgaa 31014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 31014924 - 31015011
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| |||||||  ||| || ||||  ||||| ||||||||| |||||||||||||    
T  31014924 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaagattaacctttcccatatgaaatgccacct 31015011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 42356322 - 42356233
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctca---tggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||   ||||| ||||| ||| | ||||||||||||||||||||||    
T  42356322 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggtgggaaaggattgacctttcccatgtgaaatgccacc 42356233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 50675128 - 50675211
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||||||||||| |||||||  ||||||| ||| |||| |||| ||||| ||||||||||||||||| ||||    
T  50675128 aatatgttcttcacttaatctaatcattgaattcaactttcccattgtgaaaaaggattaacctttcccatgtgaaatgtcacc 50675211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8427743 - 8427821
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||| ||||||| ||||| ||||| ||| ||||||||||    
T  8427743 aagaatatgttcttcacttaatctaatcattaaatctaactttcccatggtgggaaaggattaaccttccccatgtgaa 8427821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 23584323 - 23584245
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| || |||||||||||    
T  23584323 aagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgtgaa 23584245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 23599146 - 23599068
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| || |||||||||||    
T  23599146 aagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgtgaa 23599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 44868093 - 44868007
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||| |||||||||||| |||||||| ||||||| |||||||  |||  ||||| |||||| |||||||||||||||    
T  44868093 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaatgattaacctttcctatgtgaaatgccacc 44868007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 55281921 - 55281843
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| ||| |||| || |||| ||||||| ||||| ||||| ||||||||||||||    
T  55281921 aagaatatgttcttcacttaatctaatcattaaatccaattttcccatggtgggaaaggattaacctttcccatgtgaa 55281843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 37375468 - 37375543
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgt 85  Q
    ||||| ||||||||||||||||||||| || ||||| |||||||| |||||| ||||| ||||| |||||||||||    
T  37375468 aagaagatgttcttcacttaatctaatcatcgaatccaactttcttatggtgggaaaggattaacctttcccatgt 37375543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 41459204 - 41459138
Alignment:
Q  21 cttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||||||||||||    
T  41459204 cttcacttaatctaatcattgaatcaa-ctttctcatggtgggaaaggattaacctttcccatgtgaa 41459138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 19555356 - 19555270
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||| |||| || ||||  ||||| ||||  ||||||||||||||||    
T  19555356 aagaatatgttcttcacttaatctaatcatttaatccaactttcccatgatgggaaaagattaacctttttcatgtgaaatgccacc 19555270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 24220665 - 24220587
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||| || |||||||| || |||  ||||||  ||||||||||| ||||||||||||||    
T  24220665 aagaatatgttcttcacttaatctgatcattgaatccaatttttccatggtaggaaagaattaacctttcccatgtgaa 24220587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 37374901 - 37374820
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |     | ||||| ||||| ||||||||||||||||||||||    
T  37374901 aagaatatgttcttcacttaatctaatcattgaatccaactttccc-----gggaaaggattaacctttcccatgtgaaatgccacc 37374820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 41040621 - 41040569
Alignment:
Q  46 aaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||| |||||||||||||| ||| | ||||||||||||||||||||||||    
T  41040621 aaactttttcatggtgagaaaggattcacctttcccatgtgaaatgccacctt 41040569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 43658895 - 43658943
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatg 58  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  43658895 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 43658943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 47737673 - 47737729
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaa 66  Q
    ||||||||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||    
T  47737673 aagaatatgttcttcacttaatctaatcattgaatccaacattcccatggtgggaaa 47737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 29342993 - 29343035
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaacttt 52  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  29342993 aagaatatgttcttcacttaatctaatcattgaatccaacttt 29343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 41875616 - 41875666
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggt 60  Q
    ||||||||||||||||||||||||||| |||||| | ||||||| ||||||    
T  41875616 aagaatatgttcttcacttaatctaatcattgaacccaactttcccatggt 41875666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 48218677 - 48218599
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||  ||| ||| ||||  ||||| ||||| ||||||||    
T  48218677 aagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaaagattaacctttctcatgtgaa 48218599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 37374609 - 37374649
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttc 53  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  37374609 aatatgttcttcacttaatctaatcattgaatccaactttc 37374649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 38575107 - 38575059
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatg 58  Q
    |||||||||||||||| |||||||||| |||||||| ||||||| ||||    
T  38575107 aagaatatgttcttcatttaatctaatcattgaatccaactttcccatg 38575059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 19555923 - 19555958
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatc 45  Q
    ||||||||||||||||||||||||||| ||||||||    
T  19555923 aagaatatgttcttcacttaatctaatcattgaatc 19555958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 49752359 - 49752324
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatc 45  Q
    ||||||||||||||||||||||||||| ||||||||    
T  49752359 aagaatatgttcttcacttaatctaatcattgaatc 49752324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 49752913 - 49752960
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggt 60  Q
    ||||| |||||||||||||||||| |||||||| ||||||| ||||||    
T  49752913 aatatattcttcacttaatctaatcattgaatccaactttcccatggt 49752960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 38575642 - 38575684
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaacttt 52  Q
    |||||||||||||||||||||| |||| |||||||| ||||||    
T  38575642 aagaatatgttcttcacttaatttaatcattgaatccaacttt 38575684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 40887941 - 40887975
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaat 44  Q
    ||||||||||||||||||||||||||| |||||||    
T  40887941 aagaatatgttcttcacttaatctaatcattgaat 40887975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 43658332 - 43658263
Alignment:
Q  18 gttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||| |||||||| ||||||| ||| || |||||| ||||| | || |||||||||    
T  43658332 gttcttcacttaatctaatcattgaatc-aactttcccatagtaagaaaggattaaccgtttccatgtgaa 43658263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 43103985 - 43103924
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaatt 71  Q
    ||||||||||| ||||||||||| |||  ||||||| |||||||  |||||| |||||||||    
T  43103985 aagaatatgttattcacttaatccaatcgttgaatccaactttcctatggtgggaaagaatt 43103924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 50687182 - 50687141
Alignment:
Q  16 atgttcttcacttaatctaataattgaatcaaactttctcat 57  Q
    ||||| ||||||||||||||| |||||||| |||||||||||    
T  50687182 atgttattcacttaatctaattattgaatccaactttctcat 50687141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 40847763 - 40847675
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||| |||| |||||||||||||||||||    
T  40847763 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttttccatgtgaaatgccacctt 40847675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 199226 - 199312
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  199226 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 199312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 55815911 - 55815823
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  55815911 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaaatgccacctt 55815823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 25370392 - 25370479
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||| |||||||||||    
T  25370392 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtaaaatgccacct 25370479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 52597711 - 52597798
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| |||||||  ||||||| |||| ||||| |||||||||||||||||||||||    
T  52597711 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgaaaaaggattaacctttcccatgtgaaatgccacct 52597798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 2713843 - 2713929
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| ||||| ||||||||||||||||||||||    
T  2713843 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccacc 2713929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 12640051 - 12639965
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  |||| ||||| ||||||||||||||||||||||    
T  12640051 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgccacc 12639965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 26424404 - 26424489
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccac 95  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  |||||| ||| |||||||||||||||||||||    
T  26424404 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaagaactaacctttcccatgtgaaatgccac 26424489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 388836 - 388752
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    |||||||| ||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| |||||||||||||||||||||||    
T  388836 aatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacct 388752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 40344589 - 40344509
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaat 90  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| ||||| ||||||||| ||||||    
T  40344589 aagaatatgttcttcacttaatctaataatttaatccaactttctcatgatgagaaaggattaaactttcccatatgaaat 40344509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 20422731 - 20422818
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  |||||||  |||| ||||| |||||||||||||||||||||||    
T  20422731 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaaatgccacct 20422818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 48091095 - 48091182
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||| |||||||||||||    
T  48091095 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatatgaaatgccacct 48091182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 20075611 - 20075533
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  20075611 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 20075533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 31876874 - 31876788
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  |||||||  |||| ||||| ||||||||||||||||||||||    
T  31876874 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaacctttcccatgtgaaatgccacc 31876788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 55816450 - 55816528
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  55816450 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 55816528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 26423844 - 26423767
Alignment:
Q  11 agaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||| ||||| ||||||||||||||    
T  26423844 agaatatgttcttcacttaatctaatcattgaatccaactttttcatggtgggaaaggattaacctttcccatgtgaa 26423767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 33569805 - 33569720
Alignment:
Q  11 agaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| ||| | ||||||||||||||||||||||    
T  33569805 agaatatgttcttcacttaatctaattattgaatccaacttttccatggtgggaaaggattgacctttcccatgtgaaatgccacc 33569720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 37567474 - 37567567
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctttattt 103  Q
    |||||||||||||| |||||||||||| |||||||| ||||||| |||||||  |||| ||||| ||||||||||||||||| ||||| |||||    
T  37567474 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaagtattaacctttcccatgtgaaatgacacctatattt 37567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 32291101 - 32291014
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||| |  ||||  ||||| |||||||||||||||||||||||    
T  32291101 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatgattggaaatgattaacctttcccatgtgaaatgccacct 32291014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 199085 - 199007
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  199085 aagaatatgttcttcacttaatctaatcattgaatttaactttcccatggtgggaaaggattaacctttcccatgtgaa 199007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36945223 - 36945301
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  |||| ||||| ||||||||||||||    
T  36945223 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 36945301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 40848130 - 40848208
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||  ||||| |||| |||||||||    
T  40848130 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatagtgagaaatgattaaccttttccatgtgaa 40848208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 52597576 - 52597498
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||||||||    
T  52597576 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtgggaaaagattaacctttcccatgtgaa 52597498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 12640589 - 12640664
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||| ||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  12640589 aatatgttcttcgcttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaa 12640664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 48782077 - 48782152
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||||||||    
T  48782077 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgcgaaatgattaacctttcccatgtgaa 48782152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 389405 - 389483
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| | |||||| ||||||  ||||||| ||||| ||||| ||||||||||||||    
T  389405 aagaatatgttcttcacttaatctaatcactgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 25369869 - 25369791
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||| |||  |||| ||||| ||||||||||||||    
T  25369869 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtggaaaaggattaacctttcccatgtgaa 25369791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 28223649 - 28223571
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| | | ||||  ||||| ||||||||||||||    
T  28223649 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatagagggaaaagattaacctttcccatgtgaa 28223571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 29809087 - 29809173
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| |||| | |||||  ||||| ||||||||| ||||||||||||    
T  29809087 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatgataagaaatgattaacctttcccatatgaaatgccacc 29809173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36111217 - 36111294
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| || |||| ||||||| ||||| ||||| ||||||||||||||    
T  36111217 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggtgggaaaggattaacctttcccatgtgaa 36111294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 48090551 - 48090474
Alignment:
Q  11 agaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||| ||||||||||||| |||||||| ||||||| ||||||| ||| | ||||| ||||||||||||||    
T  48090551 agaatatgttctacacttaatctaatcattgaatccaactttcccatggtgggaatggattaacctttcccatgtgaa 48090474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 36944696 - 36944608
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  |||||||  |||  ||||| ||||| | ||||||||||||||||    
T  36944696 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaagattaacctttcacgtgtgaaatgccacctt 36944608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 40345133 - 40345208
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||| ||| ||||  ||||| ||||||||||||||    
T  40345133 aatatgttcttcacttaatctaatcattgaatctaactttcccattgtgggaaaagattaacctttcccatgtgaa 40345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 32901937 - 32901852
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatc-tttcccatgtgaaatgccac 95  Q
    |||||||||||||| |||||||||||| |||||||| ||||||| |||||||  |||| | ||||| ||||||||||||||||||||    
T  32901937 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaagga-taatcttttcccatgtgaaatgccac 32901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 32902465 - 32902543
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||  ||||| ||||| ||||||||    
T  32902465 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaatattaacctttctcatgtgaa 32902543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 20076186 - 20076233
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcat 57  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  20076186 aagaatatgttcttcacttaatctaatcattgaatccaactttctcat 20076233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 20422205 - 20422139
Alignment:
Q  22 ttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||| |||||||| | ||||| ||||||| ||||| ||||| ||||||||||||||    
T  20422205 ttcacttaatctaatcattgaatctacctttcccatggtgggaaaggattaacctttcccatgtgaa 20422139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 35427331 - 35427254
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| || |||| ||||| |  |||| ||||| ||||||||||||||    
T  35427331 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggcggaaaaggattaacctttcccatgtgaa 35427254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 47321836 - 47321759
Alignment:
Q  19 ttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||||| ||| |||| ||||||  ||| |||| |||| ||||| ||||||||| ||||||||||||    
T  47321836 ttcttcacttaatctaatcattaaatccaacttttccatagtgataaaggattaacctttcccatatgaaatgccacc 47321759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 6862733 - 6862647
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggt-gagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||||||||||||||  ||||||| |||||||  ||||| || |||| ||| | |||||| |||||||||||||||    
T  6862733 aagaatatgttcttcacttaatctaatctttgaatccaactttcctatggtagaaaaag-attgacctttcctatgtgaaatgccacc 6862647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 31877435 - 31877500
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatcttt 78  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| ||||| ||||    
T  31877435 aatatgttcttcacttaatctaatcattaaatccaactttcccatagtgaaaaaggattaaacttt 31877500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 47328397 - 47328438
Alignment:
Q  11 agaatatgttcttcacttaatctaataattgaatcaaacttt 52  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  47328397 agaatatgttcttcacttaatctaattattgaatctaacttt 47328438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 37566989 - 37566941
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatg 58  Q
    |||||||||||||||||||||| |||| |||||||| || |||||||||    
T  37566989 aagaatatgttcttcacttaatttaatcattgaatctaattttctcatg 37566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 3708859 - 3708808
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtg 61  Q
    |||| ||||||||| |||||||||||| |||||||| ||||||| |||||||    
T  3708859 aagagtatgttctttacttaatctaatcattgaatccaactttcccatggtg 3708808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 18501780 - 18501738
Alignment:
Q  55 catggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||    
T  18501780 catggtgggaaaggattaacctttcccatgtgaaatgccacct 18501738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 35428238 - 35428288
Alignment:
Q  48 actttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||| ||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  35428238 actttcccatggtgggaaaggattaacctttcccatctgaaatgccacctt 35428288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 55011746 - 55011796
Alignment:
Q  46 aaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||| ||| |||||||||  |||||||||||||||||| ||||    
T  55011746 aaactttctcatagtgggaaagaattcctctttcccatgtgaaatgtcacc 55011796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 31842726 - 31842758
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatc 45  Q
    |||||||||||||||||||||||| ||||||||    
T  31842726 aatatgttcttcacttaatctaatcattgaatc 31842758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 39852240 - 39852153
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||| ||||||||| |||||||||||||    
T  39852240 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatttgaaatgccacct 39852153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 7818560 - 7818474
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  7818560 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 7818474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 33114188 - 33114274
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  33114188 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 33114274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 16880518 - 16880596
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||||||||||||||||||    
T  16880518 aagaatatgttcttcacttaatctaatcattgaatctaactttcacatggtgggaaaggattaatctttcccatgtgaa 16880596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 16889281 - 16889195
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||||||||||||||||    
T  16889281 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaaatgccacc 16889195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7819097 - 7819175
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||||||||||||||||||    
T  7819097 aagaatatgttcttcacttaatctaatcattgaatctaactttcgcatggtgggaaaagattaatctttcccatgtgaa 7819175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 11999080 - 11999166
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||||||||||||||||    
T  11999080 aagaatatgttcttcacttcatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgccacc 11999166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 35237345 - 35237259
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||| ||||    
T  35237345 aagaatatgttattcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgtcacc 35237259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 43591616 - 43591702
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| ||||| || ||||||| ||||||| |||| |||||| ||||||||||||||||| ||||    
T  43591616 aagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaataattaacctttcccatgtgaaatgacacc 43591702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 43480702 - 43480613
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccaccttt 99  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||| |||||||  |||  ||||| |||||||||||||||||||||||||    
T  43480702 aagaatatgttcttcacttaatctaatcatttaatccaactttcccatggtgtaaaaagattaacctttcccatgtgaaatgccaccttt 43480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 11998542 - 11998464
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||||||||    
T  11998542 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 11998464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 16879974 - 16879888
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |  ||||  |||||  |||||||||||||||||||||    
T  16879974 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatgataggaaatgattaacttttcccatgtgaaatgccacc 16879888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 33113661 - 33113585
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtg 86  Q
    |||||||| |||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||||||||||||||||    
T  33113661 aagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaatctttcccatgtg 33113585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 4374995 - 4375078
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||  |||  ||| ||||||||||| ||||||||||||    
T  4374995 aatatgttcttcacttaatccaatcattgaatccaactttctcatggtggaaaatgattcatctttcccatatgaaatgccacc 4375078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 16889828 - 16889905
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||  ||||| | ||||||||||||    
T  16889828 aagaatatgttcttcacttaatctaataattgaatccaactttcccatggtgggaaatgattaa-ccttcccatgtgaa 16889905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36848197 - 36848275
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  |||||||  |||| ||||| ||||||||||||||    
T  36848197 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaa 36848275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 39852803 - 39852881
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||| ||||||||||||||||||||||||||| |||||| | |||||| ||||| ||||| ||||| ||||||||    
T  39852803 aagaatatattcttcacttaatctaataattgaatctaacttttttatggtgggaaaggattaacctttctcatgtgaa 39852881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 40907684 - 40907607
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | ||||| ||||| ||||| ||||||||||||||    
T  40907684 aagaatatgttcttcacttaatctaatcattgaatc-aactttcccgtggtgggaaaggattaacctttcccatgtgaa 40907607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 43591093 - 43591015
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||| |||||||||| |||||||  ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  43591093 aagaatatgttcttcatttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaa 43591015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 44062071 - 44061993
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||  ||||| ||||| ||||| ||||||||    
T  44062071 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggttggaaagtattaacctttctcatgtgaa 44061993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 10806437 - 10806518
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatg 91  Q
    |||||||||||||| ||||||| |||| |||||||||||||||| ||||||  ||||  ||||| |||||||||||||||||    
T  10806437 aagaatatgttctttacttaatttaatcattgaatcaaactttcccatggtaggaaaagattaacctttcccatgtgaaatg 10806518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 35237865 - 35237941
Alignment:
Q  11 agaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||||| ||||||||||  ||||| |||||| ||||| ||||| ||||||||||||||    
T  35237865 agaatatgttcttcacttaatctaattattgaatcaacttttct-atggtgggaaaggattaacctttcccatgtgaa 35237941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 30115453 - 30115354
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaa------tctttcccatgtgaaatgccacctttattt 103  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| |||||       |||||||||||||||||||||||| ||||    
T  30115453 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaaccttatcctttcccatgtgaaatgccaccttgattt 30115354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 38778798 - 38778873
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||| |||||||||||||||||| |||||||  ||||||||||||||||||||  ||||| ||||| ||||||||    
T  38778798 aatatattcttcacttaatctaatcattgaatacaactttctcatggtgagaaatgattaacctttctcatgtgaa 38778873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 40309500 - 40309587
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| |||||||  |||||| ||||  ||||| |||| | |||||||||| |||||    
T  40309500 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaatgattaaccttttctatgtgaaatgtcacct 40309587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 43481284 - 43481359
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||  ||||||||    
T  43481284 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttttcatgtgaa 43481359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 30115996 - 30116074
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||| ||||| |||||||||||| |||||||| ||||||| |||||||  |||| ||||| ||||||||||||||    
T  30115996 aagaatatattctttacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 30116074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 2209092 - 2209035
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaag 67  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||||| |||||    
T  2209092 aagaatatgttattcacttaatctaatcattgaatcgaactttctcatggtgggaaag 2209035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 38778240 - 38778184
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaa 66  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||    
T  38778240 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaa 38778184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 44062599 - 44062682
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||| |||| ||||||||||||| |||||||| ||||||| |||||||  |||| ||||| |||||| || ||||||||||||    
T  44062599 aatatattctccacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcctatatgaaatgccacc 44062682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 4374301 - 4374349
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatg 58  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  4374301 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 4374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 37532618 - 37532574
Alignment:
Q  54 tcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  37532618 tcatggtgggaaaggattaacctttcccatgtgaaatgccacctt 37532574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 10806034 - 10805991
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttc 53  Q
    |||||||||||||||| |||||||||| |||||||| |||||||    
T  10806034 aagaatatgttcttcatttaatctaatcattgaatccaactttc 10805991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 4373772 - 4373694
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||| |||| |||||||  |||||||  ||| || ||||  |||||  |||||||||||||    
T  4373772 aagaatatgttcttcacttaatataatcattgaattcaactttcctatgatgggaaatgattaacatttcccatgtgaa 4373694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 41761840 - 41761799
Alignment:
Q  55 catggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||    
T  41761840 catggtgggaaaggattaacctttcccatgtgaaatgccacc 41761799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 6e-28; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 6032753 - 6032840
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| |||| |||| |||||||||||||    
T  6032753 aagaatatgttcttcacttaatctaatcattgaatctaactttctcatggtgagaaaaaattaaccttttccatatgaaatgccacct 6032840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 5523846 - 5523932
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  |||||| ||||  ||||| ||||||||||||||||||||||    
T  5523846 aagaatatgttcttcacttaatctaatcattgaatcaaactttccaatggtgggaaaagattaacctttcccatgtgaaatgccacc 5523932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 33668307 - 33668213
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctttattta 104  Q
    |||||||||||||||||||||| |||| |||||||| ||||||| ||||||| ||||  ||||| ||||||||||||||||||||||| ||||||    
T  33668307 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgccacctatattta 33668213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 30611345 - 30611432
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    |||||||||||||||| |||||||||| |||||||| ||||||| ||||||| ||||| |||||  |||| |||||||||||||||||    
T  30611345 aagaatatgttcttcagttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttctcatgtgaaatgccacct 30611432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 6032244 - 6032166
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| ||||| ||||| ||||||||||||||    
T  6032244 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaa 6032166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 13936640 - 13936726
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||| |||||||||||| ||||| || ||||||| ||||||| ||||| ||||| ||||||||||||||||| ||||    
T  13936640 aagaatatgttctttacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaaatggcacc 13936726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 12809702 - 12809787
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccac 95  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||   || ||||| ||||| |||||||||||||||||||||    
T  12809702 aagaatatgttcttcacttaatctaatcattgaatccaactttcccaccatgggaaaggattaacctttcccatgtgaaatgccac 12809787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 5523286 - 5523208
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| |||||||  ||||||  |||| ||||| ||||||||||||||    
T  5523286 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtggaaaaggattaacctttcccatgtgaa 5523208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 12809155 - 12809077
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||  || ||| ||||| ||||| ||||||||||||||    
T  12809155 aagaatatgttcttcacttaatctaatcattgcatccaactttcctatagtgggaaaggattaacctttcccatgtgaa 12809077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 31723919 - 31723833
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| ||| |||| || |||| ||||||  ||||| ||||| ||||||||| | ||||||||||    
T  31723919 aagaatatgttcttcacttaatctaatcattaaatccaaatttcccatggtaggaaaggattaacctttcccatataaaatgccacc 31723833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 33648163 - 33648250
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    |||||||| |||||||||||||  ||| |||||||| || ||||  |||||| ||||||||| | |||||||||||||||||| ||||    
T  33648163 aagaatatattcttcacttaattcaatcattgaatccaattttcctatggtgtgaaagaattgacctttcccatgtgaaatgctacct 33648250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 13944376 - 13944298
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||| |||||||||| |||||||  ||||||| |||| || ||||  ||||||||||||||| ||||    
T  13944376 aagaatatgttcttcatttaatctaatcattgaattcaactttcccatgatgggaaatgattaatctttcccatatgaa 13944298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 30610797 - 30610723
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatg 84  Q
    ||||||||||||||||||||||||||| |||||||| || |||| |||||||  |||  ||||| ||||||||||    
T  30610797 aagaatatgttcttcacttaatctaatcattgaatccaattttcccatggtggaaaatgattaacctttcccatg 30610723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 3957586 - 3957500
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  3957586 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 3957500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 5324403 - 5324489
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||| ||||||||||||||||| ||||    
T  5324403 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtatgaaagaattaacctttcccatgtgaaatgtcacc 5324489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 4929509 - 4929592
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||| |||||||||||||||||| |||||||| ||||||| |||||||  |||| ||||| ||||||||||||||||||||||    
T  4929509 aatatattcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgccacc 4929592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 33430128 - 33430043
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||  ||||| ||||| |||| |||||||||||||||||    
T  33430128 aagaatatgttcttcacttaatctaatcattgaatccaactttc-catggtaggaaaggattaaccttttccatgtgaaatgccacc 33430043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 8813683 - 8813769
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||| |||||||||||| |||||||| ||||||| |||| ||  |||| ||||| ||||||||| ||||||||||||    
T  8813683 aagaatatgttctttacttaatctaatcattgaatccaactttcccatgatggaaaaggattaacctttcccatatgaaatgccacc 8813769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 26687586 - 26687508
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||   |||| ||||| ||||||||||||||    
T  26687586 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaa 26687508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 26957317 - 26957239
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||   |||| ||||| ||||||||||||||    
T  26957317 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaa 26957239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 3958137 - 3958212
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||| ||||||||||||||||   || || ||||| ||||| ||||||||||||||    
T  3958137 aatatgttcttcacttaatctaattattgaatcaaactttccattgatgggaaaggattaacctttcccatgtgaa 3958212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 3739663 - 3739741
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||||  ||||| |||||||    
T  3739663 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatagtaggaaaggattaagttttcctatgtgaa 3739741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 28075969 - 28076057
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||||| || ||||||||||||||| |||||||| ||||||| |||||||  |||  ||||| |||| |||||||||||| ||||||    
T  28075969 aagaatatatttttcacttaatctaatcattgaatccaactttcccatggtggaaaatgattaaccttttccatgtgaaatgtcacctt 28076057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 4928957 - 4928879
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||   |||||| ||||| |||||  |||||||||||||    
T  4928957 aagaatatgttcttcacttaatctaatcattaaatccaacttttctatggtgggaaaggattaacttttcccatgtgaa 4928879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 42408565 - 42408607
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaacttt 52  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  42408565 aagaatatgttcttcacttaatctaatcattgaatccaacttt 42408607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 21770084 - 21770002
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaat----caaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||    | ||||||| |||||||  |||| ||||| ||||||||| ||||    
T  21770084 aagaatatgttcttcacttaatctaatcattgaatccaaccaactttcccatggtggaaaaggattaacctttcccatatgaa 21770002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 13738146 - 13738103
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttc 53  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||    
T  13738146 aagaatatgttcttcacttaatccaatcattgaatccaactttc 13738103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 26688057 - 26688137
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||||||||||||||||||| |||| |||||||| |         ||||| ||||| ||||| ||||||||||||||||||||||||    
T  26688057 aagaatatgttcttcacttaatataatcattgaatctag--------tggtgggaaaggattaacctttcccatgtgaaatgccacctt 26688137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 26957788 - 26957868
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||||||||||||||||||| |||| |||||||| |         ||||| ||||| ||||| ||||||||||||||||||||||||    
T  26957788 aagaatatgttcttcacttaatataatcattgaatctag--------tggtgggaaaggattaacctttcccatgtgaaatgccacctt 26957868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 39149467 - 39149517
Alignment:
Q  46 aaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||| ||||||| ||||| ||| | ||||||||||||||||||||||    
T  39149467 aaactttcccatggtgggaaaggattcacctttcccatgtgaaatgccacc 39149517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 3739086 - 3739038
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatg 58  Q
    |||||||| || ||||||||||||||| |||||||| ||||||| ||||    
T  3739086 aagaatatatttttcacttaatctaatcattgaatccaactttcccatg 3739038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 42408078 - 42408022
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaa 66  Q
    |||||||||||||||| |||||||||| |||||||| || |||| ||| ||| ||||    
T  42408078 aagaatatgttcttcatttaatctaatcattgaatccaattttcccatagtgggaaa 42408022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 15233 - 15321
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| |||| |||||||||||||||||||    
T  15233 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaaatgccacctt 15321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 27855651 - 27855564
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  27855651 aagaatatgttcttcacttaatctaatcattgaatcaa-ctttctcatggtgggaaatgattaacctttcccatgtgaaatgccacctt 27855564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 36682921 - 36682834
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| |||||||||||||||||||||||    
T  36682921 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgccacct 36682834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 46732653 - 46732565
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||  ||| ||| ||||||||||| ||||||||||||||||||||||||    
T  46732653 aagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaagaattaacctttcccatgtgaaatgccacctt 46732565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 4895082 - 4895165
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgcc 93  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||  |||  ||||| |||||||||||||||||||    
T  4895082 aagaatatgttcttcacttaatctaataattgaatccaactttcccatggtggaaaatgattaacctttcccatgtgaaatgcc 4895165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 24044043 - 24044121
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||| ||||| ||||||||||||||    
T  24044043 aagaatatgttcttcacttaatctaatcattgaataaaactttcccatggtgggaaaggattaacctttcccatgtgaa 24044121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 47814635 - 47814713
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  47814635 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaa 47814713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 34853996 - 34854083
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| ||||| || |||||||  |||||| ||||| ||||| ||||||||||||||||| |||||    
T  34853996 aagaatatgttcttcacttaatctaatcattgactctaactttcctatggtgggaaaggattaacctttcccatgtgaaatggcacct 34854083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 36683467 - 36683542
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  36683467 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 36683542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 47814057 - 47813970
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| ||||| ||||||||  |||||||||||||    
T  47814057 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccacatgaaatgccacct 47813970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 30711874 - 30711796
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||| |||||| |||| |||||||||    
T  30711874 aagaatatgttcttcacttaatctaataattgaatccaacttttccatggtgggaaaaaattaaccttttccatgtgaa 30711796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 34853477 - 34853399
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  34853477 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaa 34853399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 42456007 - 42455921
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||||||||| |||| |||||||| || |||| | ||||| ||||| ||||| ||||||||||||||||||||||    
T  42456007 aagaatatgttcttcacttaatttaatcattgaatccaattttcccgtggtgggaaaggattaacctttcccatgtgaaatgccacc 42455921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 46815062 - 46815147
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||| |||||||||| |||||||| ||||||| ||||||| |||| |||||| |||| |||||||||||||||||    
T  46815062 aagaatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaataattaa-cttttccatgtgaaatgccacc 46815147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 42456519 - 42456594
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||| |||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  42456519 aatatgttcttcacttaatgtaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 42456594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 19816350 - 19816272
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||| | ||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  19816350 aagaatatgttttacacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 19816272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 19816895 - 19816980
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||||||||||||||||||||| ||| |||| ||||||| |||||||  |||| ||||| ||||||||| ||||||||| ||||    
T  19816895 aatatgttcttcacttaatctaatcatttaatccaactttcccatggtggaaaaggattaacctttcccatatgaaatgccgcctt 19816980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 22276079 - 22276156
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaat 90  Q
    ||||||||||||| |||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||||||| ||||    
T  22276079 aatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtaaaat 22276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 46814491 - 46814416
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgt 85  Q
    |||||||||||||||||||||||||||  ||||||  ||||||| ||||||| ||||| ||||| |||||||||||    
T  46814491 aagaatatgttcttcacttaatctaatcgttgaattcaactttcccatggtgggaaaggattaacctttcccatgt 46814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 4894585 - 4894515
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcc 80  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||| ||||| ||||||    
T  4894585 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcc 4894515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 22275510 - 22275433
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| |||| |||||||||    
T  22275510 aagaatatgttcttcacttaatctaatcattgaatc-aactttcccatggtgggaaatgattaaccttttccatgtgaa 22275433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 32499872 - 32499935
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaa 73  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | | ||| |||||||||||    
T  32499872 aagaatatgttcttcacttaatctaatcattgaatccaactttcccgttgtgggaaagaattaa 32499935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 24323982 - 24324059
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| || |||| ||| ||| ||||  ||||| ||||||||||||||    
T  24323982 aagaatatgttcttcacttaatctaattattgaatccaa-tttcccatagtgggaaatgattaacctttcccatgtgaa 24324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 33806055 - 33805974
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatg 91  Q
    |||||||||||||||||||||| |||| |||||||| ||||||  |||||||  |||  |||  ||||||||||||||||||    
T  33806055 aagaatatgttcttcacttaatttaatcattgaatccaacttttccatggtggaaaatgattggtctttcccatgtgaaatg 33805974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 32499335 - 32499287
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatg 58  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  32499335 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 32499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 18520943 - 18520900
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttc 53  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  18520943 aagaatatgttcttcacttaatctaatcattgaatccaactttc 18520900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 36620201 - 36620117
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggt-gagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    |||||||| |||||||||| |||| |||||||  |||||||||||| | || |||| ||||| ||||||||| |||||||||||||    
T  36620201 aatatgtttttcacttaatttaatcattgaattcaactttctcatgatagaaaaag-attaacctttcccatatgaaatgccacct 36620117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 36620743 - 36620780
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaact 50  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  36620743 aatatgttcttcacttaatctaatcattgaatccaact 36620780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 85085 - 85137
Alignment:
Q  46 aaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    |||||||  ||||||| ||||| ||| | ||||||||||||||||||||||||    
T  85085 aaacttttccatggtgggaaaggattcacctttcccatgtgaaatgccacctt 85137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 46012943 - 46012975
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatc 45  Q
    |||||||||||||||||||||||| ||||||||    
T  46012943 aatatgttcttcacttaatctaatcattgaatc 46012975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 1403126 - 1403038
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacctt 98  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| |||| |||||||||||||||||||    
T  1403126 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaaatgccacctt 1403038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 6288204 - 6288290
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||||||||||| |||||||| |||||   ||||||||||||| ||||| ||||||||||||||||||||||    
T  6288204 aagaatatgttcttcacttaatctaatcattgaatccaacttctccatggtgagaaaggattaacctttcccatgtgaaatgccacc 6288290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 43368835 - 43368913
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||||||||| ||||||||||||||    
T  43368835 aagaatatgttcttcacttaatctaatcattgaatacaactttcccatggtgggaaagaattaacctttcccatgtgaa 43368913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 42839023 - 42838936
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| ||||| || ||||||| ||||||| ||||| ||||| |||| |||||||||||| |||||    
T  42839023 aagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaaatggcacct 42838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 49534396 - 49534483
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||| || |||||||||||| |||||||| ||||||  ||||||| ||||| ||||| |||||||||||||||||||||||    
T  49534396 aagaatatgtttttaacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccacct 49534483  T

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Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 8560242 - 8560156
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    |||||||||||||||||||||||||||  ||||||| ||| ||| |||||||  |||| ||||| ||||||||||||||||||||||    
T  8560242 aagaatatgttcttcacttaatctaatctttgaatccaacattcccatggtggaaaaggattaacctttcccatgtgaaatgccacc 8560156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 27817006 - 27817088
Alignment:
Q  12 gaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgcca 94  Q
    ||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| ||||| ||| ||||||||||||||||    
T  27817006 gaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaaccttacccatgtgaaatgcca 27817088  T

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Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 51248483 - 51248556
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccat 83  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||||||| |||| |||||| |||||||||    
T  51248483 aagaatatgttcttcacttaatctaattattgaatcaaacttttccatggtgggaaaaaattaacctttcccat 51248556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 27797736 - 27797823
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| ||||| || ||||||| ||| |||  |||| ||||| ||||||||||||||||| |||||    
T  27797736 aagaatatgttcttcacttaatctaatcattgactctaactttcccatagtggaaaaggattaacctttcccatgtgaaatggcacct 27797823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 1403688 - 1403765
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| |||||| |||||||    
T  1403688 aagaatatgttcttcacttaatctaatcattgaatc-aactttcccatggtgggaaaggattaacctttcctatgtgaa 1403765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8560743 - 8560820
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||  ||||||| ||||| ||||| ||||||||||||||    
T  8560743 aagaatatgttcttcacttaatctaatcattgaatc-aacttttccatggtgggaaaggattaacctttcccatgtgaa 8560820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 42839787 - 42839709
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    |||||||||||||||||||||||| || ||||| || ||||||| ||||||| ||||| ||||| ||||||||||||||    
T  42839787 aagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaa 42839709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 52859788 - 52859866
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||||||  ||||| ||||| ||||||||||||||    
T  52859788 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggttggaaaggattaacctttcccatgtgaa 52859866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 42839548 - 42839620
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttccca 82  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||| ||||| ||||||||    
T  42839548 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttccca 42839620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7219648 - 7219725
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| || |||| |||| || ||||| ||||| ||||||||||||||    
T  7219648 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatgatgggaaaggattaacctttcccatgtgaa 7219725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 7782691 - 7782777
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacc 96  Q
    ||||||||||||||||||| ||| ||| |||||||| ||||||| ||||||  ||||| |||   ||||||||||||||||||||||    
T  7782691 aagaatatgttcttcacttgatccaatcattgaatccaactttcccatggtaggaaaggattggcctttcccatgtgaaatgccacc 7782777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 27797203 - 27797125
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||  ||| ||| ||||||| ||||| ||||| |||| |||||||||    
T  27797203 aagaatatgttcttcacttaatctaatcattgaattcaaccttcccatggtgggaaaggattaaccttttccatgtgaa 27797125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 49533829 - 49533751
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | ||||| ||||| ||||| ||| || |||||||    
T  49533829 aagaatatgttcttcacttaatctaatcattgaatccaactttcccgtggtgggaaaggattaaccttccctatgtgaa 49533751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 43368276 - 43368203
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccat 83  Q
    |||||||||||||||||||||| |||| |||||||| ||| ||| ||||||| ||||| ||||| |||||||||    
T  43368276 aagaatatgttcttcacttaatttaatcattgaatctaacattcccatggtgggaaaggattaacctttcccat 43368203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 41563265 - 41563187
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||| ||||||   ||||||||||  |||||||| ||||    
T  41563265 aagaatacgttcttcatttaatctaataattgaatccaactttcccatggtagaaaagaattaacatttcccatatgaa 41563187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 48843666 - 48843588
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||| |||||||||| |||| |||||||| |||||||  |||||| ||||  ||||| ||||||||||||||    
T  48843666 aagaatatgttattcacttaatataatcattgaatccaactttcctatggtgtgaaaagattaacctttcccatgtgaa 48843588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 41563792 - 41563833
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactt 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  41563792 aagaatatgttcttcacttaatctaataattgaatccaactt 41563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 48843962 - 48844010
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatg 58  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  48843962 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 48844010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 37725465 - 37725423
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaacttt 52  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  37725465 aagaatatgttcttcacttaatctaatgattgaatccaacttt 37725423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 6287706 - 6287658
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatg 58  Q
    ||||||||||||||||||||||||||| ||||||| || |||| |||||    
T  6287706 aagaatatgttcttcacttaatctaatcattgaattaatctttttcatg 6287658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 42840316 - 42840388
Alignment:
Q  13 aatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgt 85  Q
    |||||||||||||||||||||||| |||||||  ||||||| ||| |||  |||  ||||| |||||||||||    
T  42840316 aatatgttcttcacttaatctaatcattgaattcaactttcccatagtggaaaatgattaacctttcccatgt 42840388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 48369568 - 48369525
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttc 53  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||    
T  48369568 aagaatatgttcttcacttaatccaatcattgaatccaactttc 48369525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 316
Target Start/End: Complemental strand, 10447642 - 10447497
Alignment:
Q  170 ttttcttaatggttttgttattgtctccctcaatagcattttctgcatacgattttttaatgtttgcacagcaatggccgagtactttttgtacttcatc 269  Q
    |||||||  ||||||| ||||||| || ||||| | | |||| |||||| ||||  |||||||||||||| ||| |||| | ||| |||||| ||||  |    
T  10447642 ttttcttggtggttttcttattgtttcactcaacaaccttttgtgcatatgattacttaatgtttgcacaacaaaggccaaatac-ttttgtgcttcgcc 10447544  T
Q  270 aactagaaaaacagacaaatgcaaaccaaattatgagcatggagtaa 316  Q
    || |||||||||| ||  |||||||| |  |||| ||||||||||||    
T  10447543 aagtagaaaaacatacccatgcaaactagcttattagcatggagtaa 10447497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 11351 - 11265
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||| |||||||||||||||||||||||    
T  11351 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtg-gaaaagattaacctttcccatgtgaaatgccacct 11265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 11784 - 11871
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaaatgccacct 97  Q
    |||||||||||||||||||||||| || ||||| || ||||||| ||||||| ||||| ||||| |||| |||||||||||| |||||    
T  11784 aagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaaatggcacct 11871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 1571 - 1493
Alignment:
Q  10 aagaatatgttcttcacttaatctaataattgaatcaaactttctcatggtgagaaagaattaatctttcccatgtgaa 88  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||  ||||||| ||||  ||||| ||||||||||||||    
T  1571 aagaatatgttattcacttaatctaatcattgaatccaacttttccatggtgcgaaatgattaagctttcccatgtgaa 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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