View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17209_low_36 (Length: 363)

Name: NF17209_low_36
Description: NF17209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17209_low_36
NF17209_low_36
[»] chr1 (21 HSPs)
chr1 (18-313)||(2056992-2057297)
chr1 (311-363)||(30529049-30529102)
chr1 (312-363)||(4605208-4605260)
chr1 (312-363)||(25531987-25532039)
chr1 (312-363)||(37281301-37281353)
chr1 (312-363)||(52379198-52379250)
chr1 (310-363)||(50876573-50876627)
chr1 (311-363)||(29162052-29162105)
chr1 (312-363)||(3898571-3898623)
chr1 (312-363)||(16265242-16265294)
chr1 (312-363)||(16266371-16266423)
chr1 (312-363)||(26441843-26441895)
chr1 (312-363)||(32988349-32988401)
chr1 (312-363)||(43680279-43680331)
chr1 (312-363)||(50539469-50539521)
chr1 (312-361)||(48264811-48264861)
chr1 (312-363)||(1849910-1849962)
chr1 (312-363)||(38458939-38458991)
chr1 (312-363)||(39354264-39354316)
chr1 (312-363)||(42708709-42708761)
chr1 (312-359)||(45234849-45234897)
[»] chr8 (19 HSPs)
chr8 (309-363)||(13138129-13138184)
chr8 (311-363)||(14522588-14522641)
chr8 (311-363)||(2986534-2986587)
chr8 (312-363)||(6471054-6471106)
chr8 (310-363)||(3293099-3293153)
chr8 (311-363)||(23249061-23249114)
chr8 (312-363)||(8350880-8350932)
chr8 (316-363)||(10658186-10658234)
chr8 (312-363)||(18809485-18809537)
chr8 (312-363)||(30290133-30290185)
chr8 (312-363)||(30380739-30380791)
chr8 (312-363)||(37710108-37710160)
chr8 (312-363)||(43066335-43066387)
chr8 (312-361)||(45082023-45082073)
chr8 (315-363)||(40013860-40013909)
chr8 (312-363)||(2805476-2805528)
chr8 (322-361)||(6470624-6470664)
chr8 (312-363)||(29791151-29791203)
chr8 (312-363)||(31127805-31127857)
[»] chr7 (17 HSPs)
chr7 (312-363)||(48531531-48531583)
chr7 (311-363)||(31466357-31466410)
chr7 (311-363)||(36819905-36819958)
chr7 (312-363)||(4612087-4612139)
chr7 (312-363)||(10464115-10464167)
chr7 (312-363)||(23473969-23474021)
chr7 (312-363)||(24151581-24151633)
chr7 (312-363)||(37950945-37950997)
chr7 (312-363)||(47081189-47081241)
chr7 (312-363)||(47538132-47538184)
chr7 (311-361)||(34478007-34478058)
chr7 (312-361)||(19072980-19073030)
chr7 (310-363)||(28185409-28185463)
chr7 (312-361)||(36859208-36859258)
chr7 (312-363)||(35500747-35500799)
chr7 (312-363)||(37231563-37231615)
chr7 (312-363)||(47713502-47713554)
[»] chr5 (21 HSPs)
chr5 (312-363)||(14475230-14475282)
chr5 (311-363)||(35290495-35290548)
chr5 (315-363)||(39036619-39036668)
chr5 (310-363)||(37843573-37843627)
chr5 (311-363)||(38698172-38698225)
chr5 (311-363)||(43517059-43517112)
chr5 (312-363)||(4299833-4299885)
chr5 (312-363)||(5212922-5212974)
chr5 (312-363)||(22613709-22613761)
chr5 (312-363)||(32002014-32002066)
chr5 (312-363)||(35447997-35448049)
chr5 (312-363)||(39894990-39895042)
chr5 (312-363)||(42148516-42148568)
chr5 (317-363)||(37516354-37516401)
chr5 (311-361)||(40512679-40512730)
chr5 (312-361)||(32334638-32334688)
chr5 (311-363)||(4924837-4924890)
chr5 (311-363)||(5364633-5364686)
chr5 (312-359)||(970351-970399)
chr5 (312-363)||(16048294-16048346)
chr5 (312-363)||(23988786-23988838)
[»] chr4 (29 HSPs)
chr4 (312-363)||(18359973-18360025)
chr4 (312-363)||(36602903-36602955)
chr4 (312-361)||(4209570-4209620)
chr4 (319-363)||(42187007-42187052)
chr4 (312-363)||(4264343-4264395)
chr4 (312-363)||(7738819-7738871)
chr4 (312-363)||(19652256-19652308)
chr4 (312-363)||(25644568-25644620)
chr4 (312-363)||(39260132-39260184)
chr4 (312-363)||(45198340-45198392)
chr4 (312-363)||(55190566-55190618)
chr4 (317-363)||(5123162-5123209)
chr4 (311-363)||(28152200-28152253)
chr4 (311-363)||(46212349-46212402)
chr4 (312-363)||(3442344-3442396)
chr4 (312-363)||(5735480-5735532)
chr4 (312-363)||(23603647-23603699)
chr4 (312-363)||(26205704-26205756)
chr4 (312-363)||(40250786-40250838)
chr4 (312-363)||(47579495-47579547)
chr4 (312-361)||(39786357-39786407)
chr4 (310-363)||(47278275-47278329)
chr4 (311-363)||(1377240-1377293)
chr4 (311-363)||(3443386-3443439)
chr4 (311-363)||(5744082-5744135)
chr4 (311-363)||(20678587-20678640)
chr4 (312-363)||(3901139-3901191)
chr4 (312-363)||(6494799-6494851)
chr4 (312-363)||(46803841-46803893)
[»] chr3 (25 HSPs)
chr3 (311-363)||(53066579-53066632)
chr3 (312-363)||(21907205-21907257)
chr3 (311-362)||(27849146-27849198)
chr3 (312-363)||(29728098-29728150)
chr3 (312-361)||(46483759-46483809)
chr3 (311-363)||(8559004-8559057)
chr3 (311-363)||(35717854-35717907)
chr3 (311-363)||(51062599-51062652)
chr3 (312-363)||(7459820-7459872)
chr3 (312-363)||(18659261-18659313)
chr3 (312-363)||(32951136-32951188)
chr3 (312-363)||(34827462-34827514)
chr3 (312-363)||(38833872-38833924)
chr3 (312-363)||(45167508-45167560)
chr3 (312-363)||(54840128-54840180)
chr3 (312-362)||(10435329-10435380)
chr3 (315-361)||(47638266-47638313)
chr3 (312-363)||(3547420-3547472)
chr3 (312-359)||(4238494-4238542)
chr3 (312-363)||(10571144-10571196)
chr3 (312-363)||(32285176-32285228)
chr3 (316-359)||(36665231-36665275)
chr3 (312-363)||(37833109-37833161)
chr3 (312-363)||(48706846-48706898)
chr3 (312-363)||(52668486-52668538)
[»] scaffold0604 (1 HSPs)
scaffold0604 (312-363)||(1317-1369)
[»] scaffold0007 (1 HSPs)
scaffold0007 (312-363)||(15216-15268)
[»] chr2 (20 HSPs)
chr2 (312-363)||(7442891-7442943)
chr2 (312-363)||(9877083-9877135)
chr2 (311-363)||(32775902-32775955)
chr2 (311-363)||(42038732-42038785)
chr2 (312-363)||(13399105-13399157)
chr2 (312-363)||(14707535-14707587)
chr2 (312-363)||(18718448-18718500)
chr2 (312-363)||(23671585-23671637)
chr2 (312-363)||(39418020-39418072)
chr2 (312-361)||(40425249-40425299)
chr2 (314-363)||(44283281-44283331)
chr2 (311-363)||(20517627-20517680)
chr2 (311-363)||(27559784-27559837)
chr2 (319-363)||(30708937-30708982)
chr2 (309-361)||(42020200-42020253)
chr2 (311-363)||(44330593-44330646)
chr2 (312-359)||(3987232-3987280)
chr2 (312-363)||(14372286-14372338)
chr2 (312-363)||(34827121-34827173)
chr2 (312-363)||(41172757-41172809)
[»] chr6 (11 HSPs)
chr6 (311-363)||(18992112-18992165)
chr6 (311-363)||(20662058-20662111)
chr6 (311-363)||(30237376-30237429)
chr6 (312-363)||(8796258-8796310)
chr6 (312-363)||(16696016-16696068)
chr6 (312-363)||(25163373-25163425)
chr6 (312-363)||(31855027-31855079)
chr6 (311-363)||(22020485-22020538)
chr6 (309-361)||(25435622-25435675)
chr6 (312-363)||(643431-643483)
chr6 (312-363)||(7097873-7097925)
[»] scaffold0051 (1 HSPs)
scaffold0051 (312-363)||(41217-41269)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 313
Target Start/End: Complemental strand, 2057297 - 2056992
Alignment:
Q  18 ttaagaaggcatgttctctgactttgtacttaattttgcctgtatttgagaaacgatgattcctaatatagtaaaatgcttaacacattattggaatcaa 117  Q
    |||||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2057297 ttaagaaggcatgttctctgcccttgtacttaattttatctgtatttgagaaacgatgattcctaatatagtaaaatgcttaacacattattggaatcaa 2057198  T
Q  118 ttttaacacattgttttcaagtttcctaagccaatgagaagtattatgatttctttaaaagtcgtttgaaagaatggacttcgagttgaactcattttta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  2057197 ttttaacacattgttttcaagtttcctaagccaatgagaagtattataatttctttaaaagtcgtttgaaagaatg---ttcgagttgaactcattttta 2057101  T
Q  218 aacctatctcatacaagttttcttatggac-aatgttaa------------tatattagtatttttattctttcatcatgctttgcatcgtcgttcttta 304  Q
    |||||||||||||||||||||||||| ||| ||||||||            ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  2057100 aacctatctcatacaagttttcttattgacaaatgttaatatattagttgttatattagtatttttattctttcatcatgctttgcttcgccgttcttta 2057001  T
Q  305 acccattta 313  Q
    || ||||||    
T  2057000 actcattta 2056992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 30529049 - 30529102
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  30529049 ttactccctccgtcccttaataaatgacctagttgacaatatacattattgact 30529102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 4605260 - 4605208
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  4605260 tactccctccgtcccttaatagatgacctatttgacaatatacattattgact 4605208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 25532039 - 25531987
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  25532039 tactccctccgtcccttaataaatgacctagttgacaatatacattattgact 25531987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 37281353 - 37281301
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  37281353 tactccctccgtcccttaatagatgatctagttgacaatatatattattgact 37281301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 52379250 - 52379198
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  52379250 tactccctccgtcctttaataaatgacctagttgacaatatgcattattgact 52379198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 363
Target Start/End: Complemental strand, 50876627 - 50876573
Alignment:
Q  310 tttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  50876627 tttactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 50876573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 29162105 - 29162052
Alignment:
Q  311 ttactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| | || ||||||||||||||||||||||||||    
T  29162105 ttactccctccgtcccttaataaacgatctagttgacaatatacattattgact 29162052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 3898571 - 3898623
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  3898571 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 3898623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 16265294 - 16265242
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  16265294 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 16265242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 16266423 - 16266371
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  16266423 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 16266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 26441895 - 26441843
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  26441895 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 26441843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 32988349 - 32988401
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| | ||||||||||||||||||||||||    
T  32988349 tactccctccgtcccttaataaatgatccagttgacaatatacattattgact 32988401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 43680331 - 43680279
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  43680331 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 43680279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 50539521 - 50539469
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||| |||||||||||||||| |||||||    
T  50539521 tactccctccgtcccttaataaatgactcagttgacaatatacataattgact 50539469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 48264811 - 48264861
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  48264811 tactccctccgtcccttaataaatgacctagttgacaatatgcattattga 48264861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 1849962 - 1849910
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||| ||||||| |||||| |||||  ||||||||||||||||||||||||    
T  1849962 tactccatccgtcccttaataaatgacccagttgacaatatacattattgact 1849910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 38458991 - 38458939
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||| ||| |||||| |||||  ||||||||||||||||||||||||    
T  38458991 tactccctccatcccttaataaatgacccagttgacaatatacattattgact 38458939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 39354264 - 39354316
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| |||||||||| ||| |||||||||||    
T  39354264 tactccctccgtcccttaataaatgacctagttgacagtatgcattattgact 39354316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 42708761 - 42708709
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||| ||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  42708761 tactccatccgtcccttaataaatgacctagttgacaatatgcattattgact 42708709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 45234849 - 45234897
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattatt 359  Q
    |||||||||||||  |||||| ||||| |||||||||||||||||||||    
T  45234849 tactccctccgtctcttaataaatgacctagttgacaatatacattatt 45234897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 13138129 - 13138184
Alignment:
Q  309 atttactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  13138129 atttactccctccgtcctttaatagatgacctagttgataatatacattattgact 13138184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 14522641 - 14522588
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  14522641 ttactccctccgtcccttaatagatgacctagttgacaatatacattattgact 14522588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 2986587 - 2986534
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  2986587 ttactccctccgtcccttaataaatgacttagttgacaatatacattattgact 2986534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 6471106 - 6471054
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  6471106 tactccctctgtcccttaatagatgacctagttgacaatatacattattgact 6471054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 363
Target Start/End: Original strand, 3293099 - 3293153
Alignment:
Q  310 tttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  3293099 tttactccctccgtcccttaataaatgacccagttgacaatatacattattgact 3293153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 23249114 - 23249061
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  23249114 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 23249061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 8350880 - 8350932
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||| ||| |||||| ||||| |||||||||||||||||||||||||    
T  8350880 tactccctccatcccttaataaatgacctagttgacaatatacattattgact 8350932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 10658234 - 10658186
Alignment:
Q  316 ccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  10658234 ccctccgtccttcaatagatgatctatttgacaatatacattattgact 10658186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 18809537 - 18809485
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  18809537 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 18809485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 30290185 - 30290133
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  30290185 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 30290133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 30380791 - 30380739
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| | ||||||||||||||||||||||||    
T  30380791 tactccctccgtcccttaataaatgatccagttgacaatatacattattgact 30380739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 37710160 - 37710108
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||| ||||||| |||||| |||||| ||||||||||||||||||||||||    
T  37710160 tactccatccgtcccttaataaatgactcagttgacaatatacattattgact 37710108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 43066387 - 43066335
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| |||| ||||||||||||||||||||    
T  43066387 tactccctccgtcccttaataaatgacctagtcgacaatatacattattgact 43066335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 45082073 - 45082023
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  45082073 tactccctccgtcccttaataaatgacctagttgacaatatgcattattga 45082023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 40013909 - 40013860
Alignment:
Q  315 tccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||| ||| || |||||| ||||||||||||||||||||||||    
T  40013909 tccctccgtcccttagtaaatgactcagttgacaatatacattattgact 40013860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 2805476 - 2805528
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| |||||||||||||| ||| |||||||    
T  2805476 tactccctccgtcccttaataaatgacctagttgacaatatgcatcattgact 2805528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 361
Target Start/End: Original strand, 6470624 - 6470664
Alignment:
Q  322 gtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  6470624 gtcccttaatagatgacctagttgacaatatacattattga 6470664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 29791203 - 29791151
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||    
T  29791203 tactccctacgtcccttaataaatgacctagttgacaatatgcattattgact 29791151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 31127805 - 31127857
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||| ||||||||||    
T  31127805 tactccctccgtccctcaataaatgacctagttgacaatatatattattgact 31127857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 48531583 - 48531531
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  48531583 tactccctccgtcccttaatagatgacctagttgacaatatacattattgact 48531531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 31466357 - 31466410
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  31466357 ttactccctccgtcccttaataaatgacctagttgacaatatacattattgact 31466410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 36819958 - 36819905
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  36819958 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 36819905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 4612087 - 4612139
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  4612087 tactccctccgtcccttaataaatgacccagttgacaatatacattattgact 4612139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 10464115 - 10464167
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  10464115 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 10464167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 23473969 - 23474021
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||| ||||||| |||||| ||||| |||||||||||||||||||||||||    
T  23473969 tactccatccgtcccttaataaatgacctagttgacaatatacattattgact 23474021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 24151581 - 24151633
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| ||||||| |||| || ||||||||||||||||||||||    
T  24151581 tactccctccgtcccttaataggtgacctatttgacaatatacattattgact 24151633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 37950945 - 37950997
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  37950945 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 37950997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 47081241 - 47081189
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  47081241 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 47081189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 47538184 - 47538132
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||| ||||    
T  47538184 tactccctccgccccttaatagatgacctagttgacaatatacattatggact 47538132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 34478007 - 34478058
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    ||||||||||||||| | |||| ||||| |||||||||||||||||||||||    
T  34478007 ttactccctccgtccctcaataaatgacctagttgacaatatacattattga 34478058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 19073030 - 19072980
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattga 361  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  19073030 tactccctccgtcccttaataaatgacccagttgacaatatacattattga 19072980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 363
Target Start/End: Original strand, 28185409 - 28185463
Alignment:
Q  310 tttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||| |||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  28185409 tttactctctccgtcccttaataaatgacatagttgacaatatgcattattgact 28185463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 36859208 - 36859258
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  36859208 tactccctccgtcccttaataaatgacttagttgacaatatgcattattga 36859258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 35500747 - 35500799
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | ||||  |||| |||||||||||||||||||||||||    
T  35500747 tactccctccgtccctcaataattgacctagttgacaatatacattattgact 35500799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 37231563 - 37231615
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| | ||| |||||||||||||||||||||||||    
T  37231563 tactccctccgtccctcaataaacgacctagttgacaatatacattattgact 37231615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 47713502 - 47713554
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||| |||| |||||| |||||  ||||||||||||||||||||||||    
T  47713502 tactccctctgtcccttaataaatgacccagttgacaatatacattattgact 47713554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 14475230 - 14475282
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  14475230 tactccctccgtccttcaatagatgacctagttgacaatatacattattgact 14475282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 35290548 - 35290495
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  35290548 ttacttcctccgtcccttaatagatgacctagttgacaatatacattattgact 35290495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 39036668 - 39036619
Alignment:
Q  315 tccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  39036668 tccctccgtcccttaatagatgacctagttgacaatatacattattgact 39036619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 363
Target Start/End: Original strand, 37843573 - 37843627
Alignment:
Q  310 tttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||||| | |||||||||| || ||||||||||||||||||||||    
T  37843573 tttactccctccgtccctcaatagatgacctacttgacaatatacattattgact 37843627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 38698225 - 38698172
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| |||||| |||||||||||| |||||||||||    
T  38698225 ttactccctccgtcccttaataaatgacttagttgacaatatgcattattgact 38698172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 43517059 - 43517112
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  43517059 ttacttcctccgtcccttaatagatgacttagttgacaatatatattattgact 43517112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 4299833 - 4299885
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  4299833 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 4299885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 5212922 - 5212974
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||  |||||| ||||| |||||||||||||||||||||||||    
T  5212922 tactccctccgtctcttaataaatgacctagttgacaatatacattattgact 5212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 22613709 - 22613761
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  22613709 tactccctccgtccctcaataaatgacctagttgacaatatacattattgact 22613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 32002014 - 32002066
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  32002014 tactccctccgtcccttaataaatgacccagttgacaatatacattattgact 32002066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 35447997 - 35448049
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  35447997 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 35448049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 39895042 - 39894990
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  39895042 tactccctccgtcccttaataaatgacccagttgacaatatacattattgact 39894990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 42148568 - 42148516
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  42148568 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 42148516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 37516401 - 37516354
Alignment:
Q  317 cctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||||    
T  37516401 cctccgtcccttaatagataacctagttgacaatatacattattgact 37516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 40512679 - 40512730
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattga 361  Q
    |||||| |||||||| |||||| |||||| ||||||||||||||||||||||    
T  40512679 ttactctctccgtcccttaataaatgactcagttgacaatatacattattga 40512730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 32334638 - 32334688
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattga 361  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  32334638 tactccctccgtcccttaataaatgacccagttgacaatatacattattga 32334688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 4924837 - 4924890
Alignment:
Q  311 ttactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    ||||| ||||||||| ||||||||||| ||| ||||||||||| ||||||||||    
T  4924837 ttacttcctccgtcccttaatagatgacctaattgacaatatatattattgact 4924890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 5364686 - 5364633
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||| |||||||| |||||| |||||  ||||||||||||||||||||||||    
T  5364686 ttactctctccgtcccttaataaatgacccagttgacaatatacattattgact 5364633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 970399 - 970351
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattatt 359  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||    
T  970399 tactccctccgtccctcaataaatgacctagttgacaatatacattatt 970351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 16048346 - 16048294
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||| ||||||| | |||| ||||| |||||||||||||||||||||||||    
T  16048346 tactccgtccgtccctcaataaatgacctagttgacaatatacattattgact 16048294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 23988838 - 23988786
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||| ||||||| |||||| |||||| |||||||||||| |||||||||||    
T  23988838 tactccatccgtcccttaataaatgacttagttgacaatatgcattattgact 23988786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 18359973 - 18360025
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  18359973 tactccctccgtcccttaatagatgacctagttgacaatatacattattgact 18360025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 36602955 - 36602903
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  36602955 tactccctccgtcccttaatagatgacctagttgacaatatacattattgact 36602903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 4209620 - 4209570
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  4209620 tactccctccgtcccttaatagatgacctagttgacaatatacattattga 4209570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 42187007 - 42187052
Alignment:
Q  319 tccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  42187007 tccgtcctttaatagatgacctagttgacaatatacattattgact 42187052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 4264395 - 4264343
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  4264395 tactccctccgtcccttaataaatgacttagttgacaatatacattattgact 4264343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 7738819 - 7738871
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  7738819 tactccctccgtcccttaataaatgacctagttgacaatatacattattgact 7738871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 19652256 - 19652308
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  19652256 tacttcctccgtcccttaatagatgatctagttgacaatatacattattgact 19652308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 25644620 - 25644568
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||||||    
T  25644620 tactccctccgtccttcaataaatgacctagttgacaatatacattattgact 25644568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 39260132 - 39260184
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  39260132 tacttcctccgtcccttaatagatgacctagttgacaatatacattattgact 39260184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 45198340 - 45198392
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  45198340 tactccctccgtcccttaataaatgacctagttgacaatatacattattgact 45198392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 55190566 - 55190618
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  55190566 tactccctccgtcccttaatagataacctagttgacaatatacattattgact 55190618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 5123162 - 5123209
Alignment:
Q  317 cctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  5123162 cctccgtcccttaatagatgacctagttgacaatatacattattgact 5123209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 28152253 - 28152200
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  28152253 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 28152200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 46212349 - 46212402
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  46212349 ttactccctccatcccttaataaatgactcagttgacaatatacattattgact 46212402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 3442344 - 3442396
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  3442344 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 3442396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 5735532 - 5735480
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  5735532 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 5735480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 23603647 - 23603699
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||| | | |||||||||| |||||||||||||||||||||||||    
T  23603647 tactccctccgttcctcaatagatgacctagttgacaatatacattattgact 23603699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 26205704 - 26205756
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||| |||||||||||| |||||||||||    
T  26205704 tactccctccgtcccttaataaatgacttagttgacaatatgcattattgact 26205756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 40250838 - 40250786
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||| |||||||  ||||||||||| |||||||||||||||||||||||||    
T  40250838 tactccttccgtcccataatagatgacatagttgacaatatacattattgact 40250786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 47579547 - 47579495
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  47579547 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 47579495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 39786357 - 39786407
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    |||||||| ||||| |||||||||||| |||||||||||||| ||||||||    
T  39786357 tactcccttcgtcccttaatagatgacttagttgacaatatatattattga 39786407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 363
Target Start/End: Original strand, 47278275 - 47278329
Alignment:
Q  310 tttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||||||||| ||||||| || || ||||||| |||||||||||    
T  47278275 tttactccctccgtcctttaagagatgacttatttaacaatatgcattattgact 47278329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 1377293 - 1377240
Alignment:
Q  311 ttactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||| |||| |||||| |||| | ||||||||||||||||||||||||    
T  1377293 ttactccctctgtcccttaataaatgatccagttgacaatatacattattgact 1377240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 3443386 - 3443439
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||| |||| ||| |||||| ||||| |||||||||||||||||||||||||    
T  3443386 ttactctctccctcccttaataaatgacctagttgacaatatacattattgact 3443439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 5744082 - 5744135
Alignment:
Q  311 ttactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| |||| | ||||||||||||||||| ||||||    
T  5744082 ttactccctccgtcccttaataaatgacccagttgacaatatacatttttgact 5744135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 20678587 - 20678640
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||| ||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  20678587 ttacttcctccgtcccttaataaatgacctagttgacaatatgcattattgact 20678640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 3901139 - 3901191
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||| ||||||||| |||||| |||| |||||||||||||| |||||||||||    
T  3901139 tacttcctccgtcccttaataaatgatctagttgacaatatgcattattgact 3901191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 6494851 - 6494799
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||| ||||||| |||||| |||||  ||||||||||||||||||||||||    
T  6494851 tactccttccgtcccttaataaatgacccagttgacaatatacattattgact 6494799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 46803893 - 46803841
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||| |||| |||||| ||||| ||||||||||||| |||||||||||    
T  46803893 tactccctctgtcccttaataaatgacctagttgacaatatgcattattgact 46803841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 53066632 - 53066579
Alignment:
Q  311 ttactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  53066632 ttactccctccgtcccttaatagatgatctagttgacaatatatattattgact 53066579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 21907257 - 21907205
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  21907257 tactccctccgtcccttaataaatgactcagttgacaatatacattattgact 21907205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 311 - 362
Target Start/End: Complemental strand, 27849198 - 27849146
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgac 362  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  27849198 ttactccttccgtcccttaatagatgacctagttgacaatatacattattgac 27849146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 29728098 - 29728150
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  29728098 tactccctccgtcccttaataaatgatctagttgacaatatacattattgact 29728150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 46483809 - 46483759
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattga 361  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  46483809 tactccctctgtcccttaatagatgatctagttgacaatatacattattga 46483759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 8559004 - 8559057
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  8559004 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 8559057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 35717854 - 35717907
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||| |||||||||||| |||||||||| || ||||||||||||||||||||||    
T  35717854 ttacaccctccgtccttcaatagatgacgtatttgacaatatacattattgact 35717907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 51062652 - 51062599
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| |||||| |||||| |||||||||||||||||    
T  51062652 ttactccctccgtcccttaataaatgactcagttgataatatacattattgact 51062599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 7459820 - 7459872
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  7459820 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 7459872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 18659313 - 18659261
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  18659313 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 18659261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 32951136 - 32951188
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| |||| ||||||||||||||||||||||||||    
T  32951136 tactccctccgtccctcaataaatgatctagttgacaatatacattattgact 32951188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 34827514 - 34827462
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  34827514 tactccctccgtcccttaataaatgacctagttgacaatatatattattgact 34827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 38833924 - 38833872
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  38833924 tactccctccgtcccttaataaatgacccagttgacaatatacattattgact 38833872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 45167560 - 45167508
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| | ||||||||||||||||||||||||    
T  45167560 tactccctccgtcccttaatatatgatccagttgacaatatacattattgact 45167508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 54840128 - 54840180
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  54840128 tactccctccgtcccttaataaatgacccagttgacaatatacattattgact 54840180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 10435380 - 10435329
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgac 362  Q
    |||||||||||||| | |||| ||||| ||||||||||||||||||||||||    
T  10435380 tactccctccgtccctcaataaatgacctagttgacaatatacattattgac 10435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 47638313 - 47638266
Alignment:
Q  315 tccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||    
T  47638313 tccctccgtcccttaatagatgacctaattgacaatatacattattga 47638266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 3547420 - 3547472
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||| ||||| | |||||||||| || ||||||||||||||||||||||    
T  3547420 tactcccttcgtccctcaatagatgacctatttgacaatatacattattgact 3547472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 4238494 - 4238542
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattatt 359  Q
    |||||||||||||| | |||| |||||| ||||||||||||||||||||    
T  4238494 tactccctccgtccctcaataaatgacttagttgacaatatacattatt 4238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 10571144 - 10571196
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| || ||  ||||||||||||||||||||||||    
T  10571144 tactccctccgtcccttaataaataacccagttgacaatatacattattgact 10571196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 32285176 - 32285228
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||| ||||| | |||||||||| | |||||||||||||||||||||||||    
T  32285176 tactccatccgttccttaatagatggcctagttgacaatatacattattgact 32285228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 359
Target Start/End: Complemental strand, 36665275 - 36665231
Alignment:
Q  316 ccctccgtcctttaatagatga-ctagttgacaatatacattatt 359  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||    
T  36665275 ccctccgtcccttaatagatgacctatttgacaatatacattatt 36665231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 37833161 - 37833109
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| |||||| ||||||| |||||||||||    
T  37833161 tactccctccgtcccttaataaatgacctagttaacaatatgcattattgact 37833109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 48706846 - 48706898
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| | ||||||||||||| ||||||||||    
T  48706846 tactccctccgtcccttaataaatgatccagttgacaatatatattattgact 48706898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 52668486 - 52668538
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| || || ||||||||||||| |||||||||||    
T  52668486 tactccctccgtcccttaataaatcacctagttgacaatatgcattattgact 52668538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 1369 - 1317
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  1369 tactccctccgtccgtcaatagatgacctagttgacaatatacattattgact 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 15216 - 15268
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  15216 tactccctccgtcccttaataaatgacctagttgacaatatacattattgact 15268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 7442891 - 7442943
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  7442891 tactccctccgtcccttaataaatgatctagttgacaatatacattattgact 7442943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 9877083 - 9877135
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  9877083 tactccctccgtcccttaatagatgacctaattgacaatatacattattgact 9877135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 32775902 - 32775955
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||||| | ||||||||||  ||||||||||||||||||||||||    
T  32775902 ttactccctccgtccctcaatagatgacccagttgacaatatacattattgact 32775955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 42038785 - 42038732
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| |||| | ||||||||||||||||||||||||    
T  42038785 ttactccctccgtcccttaataaatgattcagttgacaatatacattattgact 42038732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 13399105 - 13399157
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||||||||    
T  13399105 tactccccccgtccctcaatagatgatctagttgacaatatacattattgact 13399157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 14707535 - 14707587
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  14707535 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 14707587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 18718500 - 18718448
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  18718500 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 18718448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 23671637 - 23671585
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  23671637 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 23671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 39418020 - 39418072
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||||||    
T  39418020 tactccctccgtctcttaatggatgacttagttgacaatatacattattgact 39418072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 40425249 - 40425299
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  40425249 tactccctccgtcccttaataaatgacctagttgacaatatgcattattga 40425299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 44283281 - 44283331
Alignment:
Q  314 ctccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  44283281 ctccctccgtcccttaataaatgacctagttgacaatatgcattattgact 44283331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 20517680 - 20517627
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||| | |||||| |||||| |||||||||||| |||||||||||    
T  20517680 ttactccctccgttccttaataaatgacttagttgacaatatgcattattgact 20517627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 27559837 - 27559784
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| |||||  ||||||||||||||||| ||||||    
T  27559837 ttactccctccgtcccttaataaatgacccagttgacaatatacatttttgact 27559784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 30708982 - 30708937
Alignment:
Q  319 tccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||||    
T  30708982 tccgtcccttaataaatgacctagttgacaatatacattattgact 30708937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 42020200 - 42020253
Alignment:
Q  309 atttactccctccgtcctttaatagatgac-tagttgacaatatacattattga 361  Q
    ||||||||||||||||| | ||||||| || || ||||||||||||||||||||    
T  42020200 atttactccctccgtccctcaatagataacctatttgacaatatacattattga 42020253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 44330646 - 44330593
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||||| ||| || |||||  ||||||||||||||||||||||||    
T  44330646 ttactccctccgtcccttattaaatgacccagttgacaatatacattattgact 44330593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 3987232 - 3987280
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattatt 359  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||||    
T  3987232 tactccctccgtcccttaataaatgacttagttgacaatatgcattatt 3987280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 14372338 - 14372286
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| ||| |||||||||| |||||||||||    
T  14372338 tactccctccgtcccttaataaatgacctaattgacaatatgcattattgact 14372286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 34827173 - 34827121
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||  ||||||||||||| ||||||||||    
T  34827173 tactccctccgtcccttaataaatgacccagttgacaatatatattattgact 34827121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 41172757 - 41172809
Alignment:
Q  312 tactccctccgtcctttaatagatga-ctagttgacaatatacattattgact 363  Q
    ||||||| |||||| |||||| |||| |||||||||||||| |||||||||||    
T  41172757 tactccccccgtcccttaataaatgatctagttgacaatatgcattattgact 41172809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 18992165 - 18992112
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||| |||||||| |||||| ||||| |||||||||||||||||||||||||    
T  18992165 ttactcgctccgtcccttaataaatgacctagttgacaatatacattattgact 18992112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 20662058 - 20662111
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  20662058 ttactccctccgtcccttaataaatgacctagttgacaatatgcattattgact 20662111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 30237429 - 30237376
Alignment:
Q  311 ttactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    ||||||||| ||||| |||||| ||||| |||||||||||||||||||||||||    
T  30237429 ttactcccttcgtcccttaataaatgacatagttgacaatatacattattgact 30237376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 8796310 - 8796258
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  8796310 tactccctccgtcccttaataaatgacccagttgacaatatacattattgact 8796258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 16696016 - 16696068
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||||||||| ||||||||||||||||| |||||||    
T  16696016 tactccctccgtccctcaatagatgacctagttgacaatatacatcattgact 16696068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 25163425 - 25163373
Alignment:
Q  312 tactccctccgtcctttaatagatgac-tagttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  25163425 tactccctccgtccctcaataaatgacatagttgacaatatacattattgact 25163373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 31855079 - 31855027
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||||| |||||||||||||| |||||||||    
T  31855079 tactccctccgtcccttaataaatgactcagttgacaatatacgttattgact 31855027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 22020538 - 22020485
Alignment:
Q  311 ttactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    ||||||||||||||| ||| || |||||  ||||||||||||||||||||||||    
T  22020538 ttactccctccgtcccttattaaatgacccagttgacaatatacattattgact 22020485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 25435675 - 25435622
Alignment:
Q  309 atttactccctccgtcctttaatagatgact-agttgacaatatacattattga 361  Q
    |||||||| |||||||| |||||| |||||  ||||||||||||||||||||||    
T  25435675 atttactctctccgtcccttaataaatgacccagttgacaatatacattattga 25435622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 643431 - 643483
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| | |||| |||||| |||||||||||||||| |||||||    
T  643431 tactccctccgtccctaaataaatgactcagttgacaatatacataattgact 643483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 7097873 - 7097925
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||| |||||| |||| | ||||||||||||| ||||||||||    
T  7097873 tactccctccgtcccttaataaatgattcagttgacaatatagattattgact 7097925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 41217 - 41269
Alignment:
Q  312 tactccctccgtcctttaatagatgact-agttgacaatatacattattgact 363  Q
    |||||||||||||  |||||| |||||| |||||||||||||| |||||||||    
T  41217 tactccctccgtctcttaataaatgacttagttgacaatatacgttattgact 41269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University