View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1720_high_64 (Length: 291)
Name: NF1720_high_64
Description: NF1720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1720_high_64 |
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Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 7 - 275
Target Start/End: Complemental strand, 11363974 - 11363705
Alignment:
| Q |
7 |
aagaatatggtttaaaaattcaaatgatgtgctttgaatatctaactttgaatgttgcattgcattcaaaattgatcccatcatcctccgggtgagcatt |
106 |
Q |
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| T |
11363974 |
aagaatatggtttaaaaattcaaatgatgtgctttgaatatctaactttgaatgttgcattgcattcaaaattgatcccatcatcctccgggtgagcatt |
11363875 |
T |
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| Q |
107 |
tgttgatcctcctgcagaatataggcagaccc-attaacgaaggaaggagttgttaacgaaatcttttaaaattagagtatactactattaccctactac |
205 |
Q |
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| T |
11363874 |
tgttgatcctcctgcagaatataggcagaccccattaacgaaggaaggagttgttaacgaaatcttttaaaattagagtatactactattaccctactac |
11363775 |
T |
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| Q |
206 |
tagaagaaacacttctattgaaagtgaaagagagtaccacatcaagatatggaaagaccagttcaaaaac |
275 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11363774 |
tagaagaaacacttttattgaaagtgaaagagagtaccacatcaagatatggaaagaccagttcaaaaac |
11363705 |
T |
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