View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1720_high_79 (Length: 251)
Name: NF1720_high_79
Description: NF1720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1720_high_79 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 236
Target Start/End: Complemental strand, 47462277 - 47462057
Alignment:
| Q |
16 |
ctaacttcccaattaccaccatcctcctccttctctcggcccaaccgccccgttattgtcggatatatcgacaatacttcagacaatgattctctcaacg |
115 |
Q |
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| T |
47462277 |
ctaacttcccaattaccaccatcctcctccttctctcggcccaaccggcccgttattgtcggatatatcgacaatacttcagacaatgattctctcaacg |
47462178 |
T |
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| Q |
116 |
ggtccaactcaaatgatccaaaccatttttcttcatttttgtaatagtatatcaaatgcagtgtatgataactcataccatggtctacacccgtcaactt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47462177 |
ggtccaactcaaatgatccaaaccatttttcttcatttttgtaatagtatatcaaatgcagtgtatgataactcataccatggtctacacccgtcaactt |
47462078 |
T |
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| Q |
216 |
gtgggtcttacccgaactcac |
236 |
Q |
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|||| |||||||||||||||| |
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| T |
47462077 |
gtggctcttacccgaactcac |
47462057 |
T |
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