View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1720_high_95 (Length: 235)
Name: NF1720_high_95
Description: NF1720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1720_high_95 |
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Alignment Details
Target: chr4 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 44077115 - 44076948
Alignment:
| Q |
16 |
ggaatatcaagtttctccaatgatagtgtgaccatagccggccatgtgttctatcactcaccagtcacgattatgatattgagatcctaaattcgattct |
115 |
Q |
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| T |
44077115 |
ggaatatcaagtttctccaatgatagtgtgaccatagccggccatgtgttctatcactcaccagtcacgattatgatattgagatcctaaattcgattct |
44077016 |
T |
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| Q |
116 |
tgtctatttaattattggttttgtttcaaaatgattcttaacatttcaacatattttttgtttgattt |
183 |
Q |
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| T |
44077015 |
tgtctatttaattattggttttgtttcaaaatgattcttaacatttcaacatattttttgtttgattt |
44076948 |
T |
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