View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1721-Insertion-5 (Length: 911)
Name: NF1721-Insertion-5
Description: NF1721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1721-Insertion-5 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 8 - 422
Target Start/End: Complemental strand, 20374002 - 20373588
Alignment:
| Q |
8 |
gatagtattcacgagtgatcttattaccgcatttagagatttgttatttatcaagaattgaagtttaaagatatttctgcaaattaatatatgttgaata |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20374002 |
gatagtattcacgagtgatcttattaccgcatttagagatttgttatttatcaagaattgaagtttaaagatatttctgcaaattaatatatgttgaata |
20373903 |
T |
 |
| Q |
108 |
ttcttgttctgcttgtttttagacctagtgcatccaagcaagaattattactcattatttatatgttgattagaatctaatcttcaataacatagccctc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20373902 |
ttcttgttctgcttgtttttagacctagtgcatccaagcaagaattattactcattatttatatgttgattagaatctaatctttaataacatagccctc |
20373803 |
T |
 |
| Q |
208 |
atgttacctgtggtgtagggttgtattcatggcagcacggttgaaagttgttgcagcacagtttaacgtttatcagctcctctttcgtgtatggtgtgag |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20373802 |
atgttacctgtggtgtagggttgtattcatggcagcacggttgaaaattgttgcagcacagtttaacgtttatcagctcctctttcgtgtatggtgtgag |
20373703 |
T |
 |
| Q |
308 |
cttccagtggctgcagtttgcattggtgtttagtagtttgtttgtgttttttctctggtgcagtttaaggttcagtgctaaatctttcatctcagcaagc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20373702 |
cttccagtggctgcagtttgcattggtgtttagtagtttgtttgtgttttttctctggtgcagtttaaggttcagtgctaaatctttcatctcagcaagc |
20373603 |
T |
 |
| Q |
408 |
ctagattaatgaata |
422 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
20373602 |
ctagattaatgaata |
20373588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 487 - 733
Target Start/End: Complemental strand, 20373523 - 20373275
Alignment:
| Q |
487 |
ctgttatctgctagtgccagagttgttgtatctttccgaactttttcggctatttcttgtttgtatttcgagtgagcttttctaataaattcattttctg |
586 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20373523 |
ctgttatctgctagtgccagagttgctgtatctttccgaactttttcggctatttcttgtttgtatttcgagtgagcttttctaataaattcattttctg |
20373424 |
T |
 |
| Q |
587 |
tttaaaannnnnnnnnnnn--ccctagatagaatgttatttggtttcaatttagttttcttaatcttcttcttgattcatctcggattctgctatatatg |
684 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20373423 |
tttaaaaaaatatatatatatccctagatagaatgttatttggtttcaatttagttttcttaatcttcttcttgattcatctcggattctgctatatatg |
20373324 |
T |
 |
| Q |
685 |
gagacaaaataacttaaatatggccgaaatatactgtttgatcagattc |
733 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
20373323 |
gagacaaaataacttaaatatggcctaaatatactgtttgatcagattc |
20373275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 771 - 911
Target Start/End: Complemental strand, 20373145 - 20373005
Alignment:
| Q |
771 |
tttaattgctatgtatagcgctctttgattgtttcagtcttagacatttaatctctagatctgtgagaactgagaaggtaactcatcaaagccgcttata |
870 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
20373145 |
tttaattgctacgtatagcgcactttgattgtttcagtcttagacaattaatctctagatctgtgagaactgagaaggcaactcatcaaagccacttata |
20373046 |
T |
 |
| Q |
871 |
atgactctgagtaagagaaaacaaaatcagtttgccacata |
911 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20373045 |
ataactctgagtaagagaaaacaaaatcagtttgccacata |
20373005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 178 - 420
Target Start/End: Original strand, 20423459 - 20423698
Alignment:
| Q |
178 |
tagaatctaatcttcaataacatagccctcatgttacctgtggtgtagggttgtattcatggcagcacggttgaaagttgttgcagcacagtttaacgtt |
277 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||| ||||||||| |||||| ||||||||||| ||||||| |||||||||||||||| ||| | || | | |
|
|
| T |
20423459 |
tagaatctaatctttaataacacagccctcattttacctgtgatgtaggtttgtattcatgtcagcacgattgaaagttgttgcagaacaaatcaatg-t |
20423557 |
T |
 |
| Q |
278 |
tatcagctcctctttcgtgtatggtgtgagcttccagtggctgcagtttgcattggtgtttagtagtttgtttgtgtttt-ttctctggtgcagtttaag |
376 |
Q |
| |
|
| ||||||| || |||||||||||||||| |||| ||||| ||| || || |||||| || ||||| |||||||||| ||||||||||||| || || |
|
|
| T |
20423558 |
tgtcagctcgtcgttcgtgtatggtgtgaccttctagtggatgcggtgggctttggtgcttggtagt---tttgtgttttattctctggtgcagatttag |
20423654 |
T |
 |
| Q |
377 |
gttcagtgctaaatctttcatctcagcaagcctagattaatgaa |
420 |
Q |
| |
|
||||||| |||||||| |||||||| ||| |||||||| ||||| |
|
|
| T |
20423655 |
gttcagttctaaatctctcatctcaacaaacctagattgatgaa |
20423698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 37 - 420
Target Start/End: Original strand, 20442356 - 20442763
Alignment:
| Q |
37 |
catttagagatttgttatttatcaagaattgaagtttaaagatatttctgcaaattaatatatgttgaatattcttgttctgcttgtttttagacctagt |
136 |
Q |
| |
|
||||||||| || ||| |||||||||||||||||| |||||||| || || |||||||||||| ||||||||||||||| | ||| |||||| ||||| |
|
|
| T |
20442356 |
catttagagcttggttctttatcaagaattgaagtataaagatagttttgaaaattaatatatattgaatattcttgttgcgattgggtttagatctagt |
20442455 |
T |
 |
| Q |
137 |
gcatcca-------------agcaagaattattactcattatttatatgt---------------tgat-tagaatctaatcttcaataacatagccctc |
207 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||| || | |||||||||||||| ||||||| ||||| | |
|
|
| T |
20442456 |
gcatccatgttgattagggaagcaagaattattactcattatttatgtgtactggttaatggtattgctatagaatctaatctttaataacacagcccac |
20442555 |
T |
 |
| Q |
208 |
atgttacctgtggtgtagggttgtattcatggcagcacggttgaaagttgttgcagcacagtttaacgtttatcagctcctctttcgtgtatggtgtgag |
307 |
Q |
| |
|
|| |||||| || |||||| ||||||||||| ||||||||| ||||||||| ||| ||| | || ||| ||||||| || ||||| ||||||||| |
|
|
| T |
20442556 |
attttacctatgatgtaggtttgtattcatgatagcacggttaaaagttgttccagaacacatcaatgttg-tcagctcgtcgttcgt--atggtgtgac |
20442652 |
T |
 |
| Q |
308 |
cttccagtggctgcagtttgcattggtgtttagtagtttgtttgtgtttt-ttctctggtgcagtttaaggttcagtgctaaatctttcatctcagcaag |
406 |
Q |
| |
|
|||||||||||||| |||||| |||||| || ||| ||| |||||||| ||||||| ||||| || |||||| || |||||||| |||||||||||| |
|
|
| T |
20442653 |
cttccagtggctgcggtttgcgttggtgcttggtaattt---tgtgttttattctctgttgcagatttaggttcggttctaaatctctcatctcagcaaa |
20442749 |
T |
 |
| Q |
407 |
cctagattaatgaa |
420 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
20442750 |
cctagattaatgaa |
20442763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 13397864 - 13397992
Alignment:
| Q |
8 |
gatagtattcacgagtgatcttattaccgcatttagagatttgttatttatcaagaattgaagtttaaagatatttctgcaaattaatatatgttgaata |
107 |
Q |
| |
|
|||||||| || |||||||| |||||||| |||||||| || |||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||| || |
|
|
| T |
13397864 |
gatagtatgcaggagtgatcctattaccgtatttagagcttggttatttatcaagaattgaagtataacgatatttttgcaaattaatatatattgagta |
13397963 |
T |
 |
| Q |
108 |
ttcttgttctgcttgtttttagacctagt |
136 |
Q |
| |
|
|||||||||||||| | |||||||||||| |
|
|
| T |
13397964 |
ttcttgttctgcttctgtttagacctagt |
13397992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 322 - 420
Target Start/End: Original strand, 13398044 - 13398144
Alignment:
| Q |
322 |
agtttgcattggtgtttagtagtttgtttgtgtttt--ttctctggtgcagtttaaggttcagtgctaaatctttcatctcagcaagcctagattaatga |
419 |
Q |
| |
|
||||||| ||||||||| |||||| |||||||||| ||||||| ||||||||| ||||||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
13398044 |
agtttgcgttggtgtttgttagtttttttgtgttttttttctctgctgcagtttagggttcagtgctaaatttctcatctcagcaagcctaaattaatga |
13398143 |
T |
 |
| Q |
420 |
a |
420 |
Q |
| |
|
| |
|
|
| T |
13398144 |
a |
13398144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 20339679 - 20339771
Alignment:
| Q |
187 |
atcttcaataacatagccctc--atgttacctgtggtgtagggttgtattcatggcagcacggttgaaagttgttgcagcacagtttaacgtt |
277 |
Q |
| |
|
||||| ||||||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||| ||||||||||| ||||| |||||| |
|
|
| T |
20339679 |
atctttaataacatagccctcgtatgttacctttggtgtagggttgtattgagggcagcacggttgaaggttgttgcagcccagttcaacgtt |
20339771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 280 - 420
Target Start/End: Original strand, 20407959 - 20408097
Alignment:
| Q |
280 |
tcagctcctctttcgtgtatggtgtgagcttccagtggctgcagtttgcattggtgtttagtagtttgtttgtgtttt-ttctctggtgcagtttaaggt |
378 |
Q |
| |
|
||||||| || |||||||||||||||| |||| ||| ||||| |||||| |||||| || ||||| |||||||||| ||||||||||||| || |||| |
|
|
| T |
20407959 |
tcagctcgtcgttcgtgtatggtgtgaccttctagtagctgcggtttgcgttggtgcttggtagt---tttgtgttttattctctggtgcagatttaggt |
20408055 |
T |
 |
| Q |
379 |
tcagtgctaaatctttcatctcagcaagcctagattaatgaa |
420 |
Q |
| |
|
||||| |||||||| |||||| ||||| |||| |||| |||| |
|
|
| T |
20408056 |
tcagttctaaatctctcatcttagcaaacctaaattagtgaa |
20408097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 13400952 - 13401046
Alignment:
| Q |
553 |
ttcgagtgagcttttctaataaattcattttctgtttaaaannnnnnnnnnnnccctagatagaatgttatttggtttcaatttagttttcttaa |
647 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13400952 |
ttcgagtgagctattctaataaattcattttttgtttaaaaaaatatatatatccctagatagaatgttatttggtttcaatttagttttcttaa |
13401046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 776 - 901
Target Start/End: Original strand, 20410072 - 20410197
Alignment:
| Q |
776 |
ttgctatgtatagcgctctttgattgtttcagtcttagacatttaatctctagatctgtgagaactgagaaggtaactcatcaaagccgcttataatgac |
875 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||| |||| ||||||||||||||||||| ||| || |||| |||| |||||| || ||||| || | |
|
|
| T |
20410072 |
ttgctatgtatagtgcactttgattgttgcagtcctagaaatttaatctctagatctgtcagagcttagaatataacacatcaatgcaacttattatatc |
20410171 |
T |
 |
| Q |
876 |
tctgagtaagagaaaacaaaatcagt |
901 |
Q |
| |
|
|||||||||||||||| |||| |||| |
|
|
| T |
20410172 |
tctgagtaagagaaaagaaaaccagt |
20410197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 20407732 - 20407830
Alignment:
| Q |
37 |
catttagagatttgttatttatcaagaattgaagtttaaagatatttctgcaaattaatatatgttgaatattcttgttctgcttgtttttagacctag |
135 |
Q |
| |
|
||||||||| || ||| |||||||||||||||||| |||||||| || ||| ||||||||||| |||||| ||||||||| | |||| |||||||||| |
|
|
| T |
20407732 |
catttagagcttggttctttatcaagaattgaagtataaagatagttttgcgaattaatatatattgaattttcttgttccgattgtgattagacctag |
20407830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 779 - 901
Target Start/End: Original strand, 20445187 - 20445309
Alignment:
| Q |
779 |
ctatgtatagcgctctttgattgtttcagtcttagacatttaatctctagatctgtgagaactgagaaggtaactcatcaaagccgcttataatgactct |
878 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||||| ||||||||||||||||||| ||| || |||| ||| |||||| || ||||| || |||| |
|
|
| T |
20445187 |
ctatgtatagcgcactttgattgttgcaatcttagaaatttaatctctagatctgtcagagcttagaatataatccatcaatgcaacttattatatctct |
20445286 |
T |
 |
| Q |
879 |
gagtaagagaaaacaaaatcagt |
901 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
20445287 |
gagtaagagaaaaacaaatcagt |
20445309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 20132916 - 20132831
Alignment:
| Q |
178 |
tagaatctaatcttcaataacatagccctcatgttacctgtggtgtagggttgtattcatggcagcacggttgaaagttgttgcag |
263 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||||| | | |||||||||||||||||||| ||||| ||||| |||||||||| |
|
|
| T |
20132916 |
tagaatccaacctttaataacatagccctcatgttacattttgtgtagggttgtattcatgggagcacaattgaaggttgttgcag |
20132831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 20140146 - 20140036
Alignment:
| Q |
178 |
tagaatctaatcttcaataacatagccctcatgttacctgtgg---tgtagggttgtattcatggcagcacggttgaaagttgttgcagcacagtttaac |
274 |
Q |
| |
|
||||||||| |||| ||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||| ||||| ||| ||||||||| || ||| |
|
|
| T |
20140146 |
tagaatctactctttaataacataaccctcatgtcacctgtgggattgtagggttgtattcatgggagcacaattgaaggttactgcagcacacttcaac |
20140047 |
T |
 |
| Q |
275 |
gtttatcagct |
285 |
Q |
| |
|
||| ||||||| |
|
|
| T |
20140046 |
gttgatcagct |
20140036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 495 - 647
Target Start/End: Original strand, 20408170 - 20408313
Alignment:
| Q |
495 |
tgctagtgccagagttgttgtatctttccgaactttttcggctatttcttgtttgtatttcgagtgagcttttctaataaattcattttctgtttaaaan |
594 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||| | || || |||||||||||| || || |||||| ||||| ||||||||||| |||||| ||| |
|
|
| T |
20408170 |
tgctagtgc-agagttgttgtatctttccgagctttcttgggtacttcttgtttgtactttgaatgagctgttctattaaattcatttactgtttgaaa- |
20408267 |
T |
 |
| Q |
595 |
nnnnnnnnnnnccctagatagaatgttatttggtttcaatttagttttcttaa |
647 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
20408268 |
-------aaatccctagatagaatgttatttggtatcaattaggttttcttaa |
20408313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 776 - 834
Target Start/End: Original strand, 20426772 - 20426830
Alignment:
| Q |
776 |
ttgctatgtatagcgctctttgattgtttcagtcttagacatttaatctctagatctgt |
834 |
Q |
| |
|
|||| ||||| ||||| |||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
20426772 |
ttgccatgtagagcgcattttgattgttgcagtcttagaaatttaatctctagatctgt |
20426830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 20408678 - 20408613
Alignment:
| Q |
794 |
tttgattgtttcagtcttagacatttaatctctagatctgtgagaactgagaaggtaactcatcaa |
859 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||||| ||| || |||| |||| |||||| |
|
|
| T |
20408678 |
tttgattgttgcagtcttagaaatttaatctctagatctgtcagagcttagaatataacccatcaa |
20408613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 20339550 - 20339612
Alignment:
| Q |
50 |
gttatttatcaagaattgaagtttaaagatatttctgcaaattaatatatgttgaatattcttg |
113 |
Q |
| |
|
||||| ||| || ||||||||| ||||||||||| || |||||| ||||||||||||||||||| |
|
|
| T |
20339550 |
gttatctataaataattgaagtataaagatattt-tgaaaattattatatgttgaatattcttg |
20339612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 649
Target Start/End: Complemental strand, 20139762 - 20139733
Alignment:
| Q |
620 |
ttatttggtttcaatttagttttcttaatc |
649 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
20139762 |
ttatttggtttcaatttagttttcttaatc |
20139733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 805 - 862
Target Start/End: Complemental strand, 20443284 - 20443227
Alignment:
| Q |
805 |
cagtcttagacatttaatctctagatctgtgagaactgagaaggtaactcatcaaagc |
862 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||| || |||| |||| ||||||||| |
|
|
| T |
20443284 |
cagtcttagaaatttaatctctagatctgtcagagcttagaatataacccatcaaagc |
20443227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 607 - 700
Target Start/End: Original strand, 15963246 - 15963340
Alignment:
| Q |
607 |
cctagatagaatgttatttggtttcaatttagttttcttaatcttcttcttgattcatctcgga-ttctgctatatatggagacaaaataactta |
700 |
Q |
| |
|
|||| |||||| ||||||||||||||||| ||||||||||| ||| || || |||||||| ||| || |||| ||||||||||||| | |||||| |
|
|
| T |
15963246 |
cctaaatagaaggttatttggtttcaattcagttttcttaaacttgtttttaattcatcttggatttatgctttatatggagacaagacaactta |
15963340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 15963142 - 15963194
Alignment:
| Q |
237 |
tggcagcacggttgaaagttgttgcagcacagtttaacgtttatcagctcctc |
289 |
Q |
| |
|
|||||||| |||||||||||||||||||||| || |||||| ||||||||||| |
|
|
| T |
15963142 |
tggcagcatggttgaaagttgttgcagcacacttcaacgttgatcagctcctc |
15963194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University