View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17210_high_21 (Length: 264)
Name: NF17210_high_21
Description: NF17210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17210_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 7092180 - 7092410
Alignment:
| Q |
19 |
taaggtgtattattatgaaactagaattaaattattaannnnnnn-agggataaattattcatattatattgtaaattaatggtaatacacctagctagg |
117 |
Q |
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| T |
7092180 |
taaggtgtattattatgaaactagaattaaattattaattttttttagggataaattattcatattatattgtaaattaatggtaatacacctagctagg |
7092279 |
T |
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| Q |
118 |
gacaatggtttttgtgaaggacggatcctacaagaatcattcctaaaagttcccctacaattaaaaacaaaacatcacaaagatagagagatacctttga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7092280 |
gacaatggtttttgtgaaggacggatcctacaagaatcattcctaaaagttcccctacaattaaaaacaaaacatcacaaagatagagagatacctttga |
7092379 |
T |
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| Q |
218 |
ggataaccaaaccaaaccgaatcattttagt |
248 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
7092380 |
ggataaccaaaccaaaccgaatcattttagt |
7092410 |
T |
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