View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17210_low_26 (Length: 245)

Name: NF17210_low_26
Description: NF17210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17210_low_26
NF17210_low_26
[»] chr8 (51 HSPs)
chr8 (16-148)||(37985850-37985982)
chr8 (47-148)||(26041907-26042008)
chr8 (47-148)||(40779923-40780024)
chr8 (47-147)||(6108028-6108128)
chr8 (47-147)||(10044518-10044618)
chr8 (47-147)||(17841645-17841745)
chr8 (47-146)||(14129029-14129128)
chr8 (47-145)||(24211169-24211267)
chr8 (47-148)||(1645758-1645859)
chr8 (47-148)||(15187730-15187831)
chr8 (47-148)||(32064916-32065017)
chr8 (47-147)||(25581034-25581134)
chr8 (53-148)||(1503637-1503732)
chr8 (47-145)||(20091598-20091696)
chr8 (47-145)||(34665551-34665649)
chr8 (47-147)||(3596836-3596936)
chr8 (47-147)||(42754837-42754937)
chr8 (48-145)||(38017103-38017201)
chr8 (47-147)||(30055686-30055786)
chr8 (47-136)||(39772608-39772697)
chr8 (59-148)||(31347570-31347659)
chr8 (47-135)||(32394027-32394114)
chr8 (47-135)||(35353211-35353299)
chr8 (48-145)||(37132477-37132575)
chr8 (15-122)||(8453971-8454078)
chr8 (57-148)||(7022159-7022250)
chr8 (55-116)||(41819594-41819655)
chr8 (55-144)||(3890412-3890502)
chr8 (67-148)||(30834849-30834931)
chr8 (57-148)||(7017652-7017743)
chr8 (47-147)||(24844655-24844756)
chr8 (71-135)||(27782105-27782170)
chr8 (71-135)||(32064757-32064822)
chr8 (71-135)||(34665394-34665459)
chr8 (71-135)||(42755030-42755095)
chr8 (71-143)||(30835035-30835107)
chr8 (97-135)||(1886633-1886672)
chr8 (71-144)||(24844847-24844920)
chr8 (71-143)||(6108221-6108294)
chr8 (71-135)||(7021990-7022055)
chr8 (71-135)||(8453846-8453911)
chr8 (71-116)||(15972865-15972910)
chr8 (71-135)||(17841838-17841903)
chr8 (71-135)||(20091789-20091854)
chr8 (71-108)||(25581227-25581264)
chr8 (71-135)||(26042104-26042169)
chr8 (50-107)||(27835288-27835345)
chr8 (71-116)||(31347770-31347815)
chr8 (71-143)||(39772789-39772862)
chr8 (71-135)||(40780117-40780182)
chr8 (80-135)||(38016983-38017039)
[»] chr5 (29 HSPs)
chr5 (19-147)||(8145515-8145643)
chr5 (16-148)||(3521801-3521933)
chr5 (47-148)||(4892372-4892473)
chr5 (16-148)||(14138806-14138938)
chr5 (47-147)||(33584124-33584224)
chr5 (47-148)||(25398408-25398509)
chr5 (47-148)||(37321587-37321688)
chr5 (47-147)||(6043307-6043407)
chr5 (47-144)||(12850972-12851069)
chr5 (47-146)||(3362949-3363048)
chr5 (47-147)||(2477806-2477906)
chr5 (47-147)||(38899520-38899621)
chr5 (47-148)||(12614531-12614633)
chr5 (57-147)||(22912852-22912942)
chr5 (47-126)||(11360947-11361026)
chr5 (57-148)||(17545476-17545567)
chr5 (47-105)||(4433845-4433903)
chr5 (71-147)||(27482017-27482095)
chr5 (71-143)||(8145379-8145452)
chr5 (71-135)||(12614721-12614786)
chr5 (54-110)||(13664736-13664792)
chr5 (71-135)||(22913042-22913107)
chr5 (16-116)||(31640767-31640867)
chr5 (76-135)||(10458409-10458469)
chr5 (71-135)||(2477648-2477713)
chr5 (71-135)||(6043499-6043564)
chr5 (71-135)||(11361119-11361184)
chr5 (71-116)||(17545673-17545718)
chr5 (71-116)||(31640928-31640973)
[»] chr3 (39 HSPs)
chr3 (16-148)||(22426139-22426271)
chr3 (16-147)||(19650695-19650826)
chr3 (16-147)||(30385539-30385670)
chr3 (47-148)||(3137208-3137309)
chr3 (47-148)||(33113964-33114065)
chr3 (47-148)||(34482682-34482783)
chr3 (47-148)||(37216847-37216948)
chr3 (47-146)||(8320378-8320477)
chr3 (47-148)||(3456234-3456335)
chr3 (47-148)||(6042047-6042148)
chr3 (47-147)||(3089589-3089689)
chr3 (47-147)||(3574321-3574421)
chr3 (47-147)||(2754889-2754989)
chr3 (47-147)||(37522223-37522323)
chr3 (47-145)||(33145882-33145980)
chr3 (47-147)||(47738281-47738382)
chr3 (47-148)||(48161076-48161177)
chr3 (47-147)||(26612916-26613017)
chr3 (55-148)||(36864826-36864920)
chr3 (57-148)||(40328011-40328103)
chr3 (57-147)||(9796824-9796914)
chr3 (47-135)||(33839705-33839794)
chr3 (57-148)||(8361833-8361924)
chr3 (48-147)||(24343720-24343820)
chr3 (47-146)||(46919064-46919164)
chr3 (57-148)||(41224414-41224505)
chr3 (47-145)||(42921295-42921394)
chr3 (47-107)||(42298032-42298092)
chr3 (58-132)||(41883031-41883106)
chr3 (71-143)||(9797017-9797090)
chr3 (71-135)||(2754729-2754794)
chr3 (71-135)||(6041896-6041961)
chr3 (71-135)||(47738117-47738182)
chr3 (71-135)||(3137402-3137467)
chr3 (71-135)||(3574515-3574580)
chr3 (71-116)||(8362033-8362078)
chr3 (47-84)||(11347439-11347476)
chr3 (71-143)||(19650888-19650961)
chr3 (71-135)||(33145725-33145789)
[»] chr7 (30 HSPs)
chr7 (16-147)||(24395110-24395241)
chr7 (47-147)||(34483008-34483108)
chr7 (50-148)||(15577641-15577739)
chr7 (16-148)||(3962117-3962249)
chr7 (47-148)||(45637881-45637982)
chr7 (47-148)||(35445567-35445668)
chr7 (47-148)||(15329444-15329545)
chr7 (47-148)||(42611981-42612082)
chr7 (47-148)||(48880721-48880822)
chr7 (47-147)||(30848739-30848839)
chr7 (47-145)||(4974532-4974630)
chr7 (47-147)||(35876414-35876514)
chr7 (63-147)||(25167651-25167735)
chr7 (47-138)||(29737314-29737406)
chr7 (55-148)||(42696261-42696355)
chr7 (57-146)||(37476876-37476965)
chr7 (50-145)||(20009895-20009991)
chr7 (57-148)||(15238564-15238655)
chr7 (57-148)||(18037157-18037248)
chr7 (188-225)||(16848140-16848177)
chr7 (71-135)||(4974723-4974788)
chr7 (71-135)||(15329285-15329350)
chr7 (83-147)||(36790271-36790336)
chr7 (71-135)||(42611823-42611888)
chr7 (71-135)||(45637724-45637789)
chr7 (71-135)||(48880915-48880980)
chr7 (74-135)||(15577841-15577903)
chr7 (81-147)||(40880641-40880706)
chr7 (71-116)||(15238414-15238459)
chr7 (71-135)||(34482847-34482912)
[»] chr4 (45 HSPs)
chr4 (16-147)||(36073488-36073619)
chr4 (19-148)||(22199401-22199530)
chr4 (47-148)||(2625007-2625108)
chr4 (47-148)||(21802114-21802215)
chr4 (47-148)||(46442014-46442115)
chr4 (47-148)||(49387681-49387782)
chr4 (47-148)||(7744906-7745007)
chr4 (48-148)||(10442581-10442682)
chr4 (47-148)||(44893007-44893108)
chr4 (47-148)||(53123201-53123302)
chr4 (47-147)||(44893596-44893696)
chr4 (47-145)||(9089040-9089138)
chr4 (47-148)||(36073121-36073222)
chr4 (47-148)||(47290236-47290337)
chr4 (47-148)||(50156373-50156473)
chr4 (47-147)||(33530479-33530579)
chr4 (47-145)||(24128409-24128507)
chr4 (47-148)||(4751617-4751718)
chr4 (47-148)||(31078613-31078714)
chr4 (47-137)||(23964269-23964359)
chr4 (47-145)||(17655600-17655699)
chr4 (47-148)||(37219801-37219903)
chr4 (50-148)||(11314045-11314144)
chr4 (47-149)||(37934734-37934837)
chr4 (49-147)||(42671840-42671939)
chr4 (47-116)||(30563379-30563448)
chr4 (57-145)||(24392854-24392942)
chr4 (55-146)||(44744610-44744698)
chr4 (81-147)||(25063369-25063436)
chr4 (71-135)||(33530676-33530741)
chr4 (55-147)||(36073256-36073349)
chr4 (71-134)||(36073731-36073795)
chr4 (71-135)||(10442777-10442842)
chr4 (71-135)||(31078807-31078872)
chr4 (71-135)||(49387876-49387941)
chr4 (71-135)||(2624849-2624914)
chr4 (71-135)||(7745100-7745165)
chr4 (71-135)||(21802310-21802375)
chr4 (71-135)||(22199273-22199338)
chr4 (71-143)||(23964453-23964526)
chr4 (71-135)||(24392679-24392744)
chr4 (71-135)||(36072959-36073024)
chr4 (71-135)||(46441856-46441921)
chr4 (71-135)||(47290078-47290143)
chr4 (107-147)||(53998979-53999020)
[»] scaffold0228 (6 HSPs)
scaffold0228 (47-148)||(26106-26207)
scaffold0228 (47-148)||(16154-16255)
scaffold0228 (71-135)||(8414-8479)
scaffold0228 (47-80)||(8572-8605)
scaffold0228 (71-135)||(15996-16061)
scaffold0228 (71-135)||(25948-26013)
[»] chr6 (27 HSPs)
chr6 (47-148)||(33696867-33696968)
chr6 (47-147)||(17175816-17175916)
chr6 (47-148)||(28675318-28675419)
chr6 (47-148)||(32702375-32702476)
chr6 (47-147)||(18365369-18365469)
chr6 (47-147)||(18370633-18370733)
chr6 (47-147)||(33695121-33695221)
chr6 (47-148)||(17705263-17705363)
chr6 (47-148)||(23290875-23290976)
chr6 (47-147)||(2309218-2309318)
chr6 (50-136)||(6031546-6031632)
chr6 (47-116)||(18889470-18889539)
chr6 (57-145)||(11548386-11548474)
chr6 (47-148)||(29693615-29693717)
chr6 (47-106)||(6127447-6127506)
chr6 (81-146)||(34238883-34238948)
chr6 (69-147)||(582522-582602)
chr6 (94-147)||(2121004-2121058)
chr6 (71-135)||(28675160-28675225)
chr6 (71-135)||(33695315-33695380)
chr6 (71-135)||(33696708-33696773)
chr6 (71-135)||(6127287-6127352)
chr6 (71-116)||(11548576-11548621)
chr6 (71-135)||(17176009-17176074)
chr6 (71-135)||(17705453-17705518)
chr6 (71-135)||(23291072-23291137)
chr6 (47-79)||(9752109-9752141)
[»] chr1 (31 HSPs)
chr1 (47-148)||(20304924-20305025)
chr1 (16-148)||(44094836-44094968)
chr1 (47-148)||(51737675-51737776)
chr1 (47-147)||(37821629-37821729)
chr1 (47-146)||(40215158-40215257)
chr1 (47-148)||(18404618-18404719)
chr1 (47-148)||(19015574-19015675)
chr1 (47-148)||(36966502-36966603)
chr1 (47-148)||(41876236-41876337)
chr1 (47-147)||(9910086-9910186)
chr1 (47-147)||(25463846-25463946)
chr1 (47-147)||(25973577-25973677)
chr1 (47-147)||(3559787-3559887)
chr1 (47-147)||(6883657-6883757)
chr1 (71-147)||(19722894-19722970)
chr1 (57-148)||(33786425-33786516)
chr1 (57-147)||(32000061-32000151)
chr1 (50-145)||(44690818-44690914)
chr1 (57-145)||(40273888-40273976)
chr1 (47-148)||(10167569-10167671)
chr1 (71-144)||(33786623-33786696)
chr1 (55-148)||(27523049-27523143)
chr1 (71-143)||(40273706-40273779)
chr1 (75-146)||(52064373-52064445)
chr1 (71-135)||(16045786-16045851)
chr1 (71-135)||(40215000-40215065)
chr1 (55-110)||(52329453-52329508)
chr1 (71-135)||(18404454-18404519)
chr1 (71-135)||(25463688-25463753)
chr1 (71-135)||(32000255-32000320)
chr1 (71-135)||(44094710-44094775)
[»] scaffold0178 (2 HSPs)
scaffold0178 (47-147)||(11791-11891)
scaffold0178 (71-135)||(11633-11698)
[»] scaffold0085 (2 HSPs)
scaffold0085 (16-147)||(47988-48119)
scaffold0085 (71-134)||(47863-47927)
[»] chr2 (31 HSPs)
chr2 (47-147)||(9293370-9293470)
chr2 (47-147)||(10662058-10662158)
chr2 (47-147)||(33380377-33380477)
chr2 (47-147)||(35160929-35161029)
chr2 (47-148)||(13355018-13355119)
chr2 (47-147)||(23267857-23267957)
chr2 (16-144)||(31174633-31174761)
chr2 (47-143)||(3989246-3989342)
chr2 (47-147)||(7475303-7475403)
chr2 (57-148)||(43331092-43331183)
chr2 (47-148)||(22592880-22592984)
chr2 (57-147)||(9723586-9723677)
chr2 (47-116)||(16767288-16767357)
chr2 (47-116)||(21936252-21936321)
chr2 (57-145)||(21393483-21393570)
chr2 (57-108)||(34320991-34321042)
chr2 (57-126)||(37335824-37335894)
chr2 (71-135)||(14941354-14941419)
chr2 (102-147)||(39819272-39819317)
chr2 (71-135)||(27847644-27847709)
chr2 (71-143)||(31174822-31174895)
chr2 (47-107)||(14941199-14941259)
chr2 (71-135)||(9293564-9293629)
chr2 (72-117)||(37335744-37335789)
chr2 (71-135)||(9723417-9723482)
chr2 (71-135)||(10661899-10661964)
chr2 (71-143)||(13354850-13354923)
chr2 (71-135)||(21936093-21936158)
chr2 (71-135)||(23268050-23268115)
chr2 (71-135)||(35160769-35160834)
chr2 (71-135)||(43330924-43330989)
[»] scaffold0096 (2 HSPs)
scaffold0096 (16-147)||(41149-41280)
scaffold0096 (71-135)||(41023-41088)
[»] scaffold0204 (1 HSPs)
scaffold0204 (47-147)||(4566-4666)
[»] scaffold0471 (1 HSPs)
scaffold0471 (47-145)||(13012-13110)
[»] scaffold0041 (1 HSPs)
scaffold0041 (81-147)||(85577-85642)


Alignment Details
Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 37985982 - 37985850
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37985982 atggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 37985883  T
Q  116 tataaaatcattcttgatatctaacattttcct 148  Q
    ||||||||||||||||||||||| |||||||||    
T  37985882 tataaaatcattcttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 26042008 - 26041907
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  26042008 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26041909  T
Q  147 ct 148  Q
    ||    
T  26041908 ct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 40780024 - 40779923
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  40780024 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 40779925  T
Q  147 ct 148  Q
    ||    
T  40779924 ct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 6108128 - 6108028
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  6108128 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6108029  T
Q  147 c 147  Q
    |    
T  6108028 c 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  147 c 147  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 17841745 - 17841645
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  17841745 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 17841646  T
Q  147 c 147  Q
    |    
T  17841645 c 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 1645859 - 1645758
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttc 1645760  T
Q  147 ct 148  Q
    ||    
T  1645759 ct 1645758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 15187730 - 15187831
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15187829  T
Q  147 ct 148  Q
    ||    
T  15187830 ct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 32064916 - 32065017
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 32065015  T
Q  147 ct 148  Q
    ||    
T  32065016 ct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 25581134 - 25581034
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  25581134 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25581035  T
Q  147 c 147  Q
    |    
T  25581034 c 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  53 gattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 20091696 - 20091598
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20091696 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 34665551 - 34665649
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 3596936 - 3596836
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  3596936 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3596837  T
Q  147 c 147  Q
    |    
T  3596836 c 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 42754937 - 42754837
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 42754838  T
Q  147 c 147  Q
    |    
T  42754837 c 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 38017103 - 38017201
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggtga-ttattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38017103 tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 30055686 - 30055786
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 30055785  T
Q  147 c 147  Q
    |    
T  30055786 c 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 39772697 - 39772608
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatc 136  Q
    |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 31347659 - 31347570
Alignment:
Q  59 taaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 31347570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 32394027 - 32394114
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatat 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 35353211 - 35353299
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatat 135  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  35353211 atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 8453971 - 8454078
Alignment:
Q  15 tatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttc 114  Q
    ||||| |||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  8453971 tatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttc 8454070  T
Q  115 ttataaaa 122  Q
    ||||||||    
T  8454071 ttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 7022159 - 7022250
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||   |||||||| |||||||||| |||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcct 7022250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattt 144  Q
    ||||||||| ||| | |||||||| |||||||||| || ||| ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 30834931 - 30834849
Alignment:
Q  67 actgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||| |||| ||||| || |||||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 7017743 - 7017652
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||| | |||||||| | | ||||||||||| ||| ||||||   ||||||||||||||||||| |||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcct 7017652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 24844756 - 24844655
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    ||||||| ||||||| | ||| | ||||||||  ||||||||| || |||| ||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T
Q  146 cc 147  Q
    ||    
T  24844656 cc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || ||||||||| ||||||||||||| |||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 32064822 - 32064757
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 34665459 - 34665394
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 30835035 - 30835107
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatt 143  Q
    ||||| || |||||||||| || |||||||||||||||| |||   |||||||| |||||||||| |||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatatataacatt 30835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 1886633 - 1886672
Alignment:
Q  97 gtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  1886633 gtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattt 144  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||  |||||||||| || |||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 6108221 - 6108294
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 143  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacatt 6108294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || ||| |||||||||||| |||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 8453911 - 8453846
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 8453846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 15972865 - 15972910
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||| |||||||||| || |||||||||||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttctt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 17841838 - 17841903
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 20091789 - 20091854
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 25581227 - 25581264
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaa 108  Q
    ||||||||||||||||||| || |||||||||||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaa 25581264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 26042104 - 26042169
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatat 26042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 27835345 - 27835288
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttga 107  Q
    |||| ||||||||||||| |||||||||| | ||||||||||| ||| ||||| ||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 31347770 - 31347815
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 31347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 39772789 - 39772862
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttg-aatctttcttataaaatcattcttgatatctaacatt 143  Q
    |||||||| |||||||||| || ||||||||||||| ||| ||| | |||||||  |||||||||| |||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacatt 39772862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 40780117 - 40780182
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  80 ggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 8145515 - 8145643
Alignment:
Q  19 gggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttat 118  Q
    |||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8145515 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 8145614  T
Q  119 aaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||||||||||| ||||||||    
T  8145615 aaaatcattcttgatatctagcattttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 3521933 - 3521801
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  3521933 atggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttct 3521834  T
Q  116 tataaaatcattcttgatatctaacattttcct 148  Q
    ||||||||||||||||||||||| |||||||||    
T  3521833 tataaaatcattcttgatatctagcattttcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 4892372 - 4892473
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4892372 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 4892471  T
Q  147 ct 148  Q
    ||    
T  4892472 ct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 14138806 - 14138938
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  14138806 atggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 14138905  T
Q  116 tataaaatcattcttgatatctaacattttcct 148  Q
    ||||||||||||||| ||||||| |||||||||    
T  14138906 tataaaatcattcttaatatctagcattttcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 33584224 - 33584124
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  33584224 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33584125  T
Q  147 c 147  Q
    |    
T  33584124 c 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 25398408 - 25398509
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  25398408 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttc 25398507  T
Q  147 ct 148  Q
    ||    
T  25398508 ct 25398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 37321688 - 37321587
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  37321688 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttc 37321589  T
Q  147 ct 148  Q
    ||    
T  37321588 ct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 6043407 - 6043307
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  6043407 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 6043308  T
Q  147 c 147  Q
    |    
T  6043307 c 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 12850972 - 12851069
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattt 144  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 3362949 - 3363048
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  3362949 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 2477806 - 2477906
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  2477806 atgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 2477905  T
Q  147 c 147  Q
    |    
T  2477906 c 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 38899621 - 38899520
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaa-tctttcttataaaatcattcttgatatctaacatttt 145  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||||||||| ||||||    
T  38899621 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatttt 38899522  T
Q  146 cc 147  Q
    ||    
T  38899521 cc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||||||| ||||||||||| ||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  146 cct 148  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 11361026 - 11360947
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcat 126  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  11361026 atgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   ||||||||||||||||||| |||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 4433903 - 4433845
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattctt 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  4433903 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 27482017 - 27482095
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctaacattttcc 147  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| || |||||||||||| || |||||||| |||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctttaatatctaatattttcc 27482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 8145452 - 8145379
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 143  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  54 attaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatc 110  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 22913042 - 22913107
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 31640867 - 31640767
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         ||||||| ||||||||| |||    |||||||||  ||||||| || ||||||||||||||||||||||    
T  31640867 atggggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatctaaagtcgattattctgccatgtcattcttgaatctttct 31640768  T
Q  116 t 116  Q
    |    
T  31640767 t 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  76 taaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||||||||| || |||||||||||||||| |||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 2477713 - 2477648
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 6043499 - 6043564
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| |  |||||||||||||||  |||||| |||||||| ||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 11361119 - 11361184
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||| |||| ||||| || |||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 22426271 - 22426139
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  22426271 atggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttct 22426172  T
Q  116 tataaaatcattcttgatatctaacattttcct 148  Q
    ||||||||||||||||||||||| |||||||||    
T  22426171 tataaaatcattcttgatatctagcattttcct 22426139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 19650826 - 19650695
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  19650826 atggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttct 19650727  T
Q  116 tataaaatcattcttgatatctaacattttcc 147  Q
    ||||||||||||||||||||||| ||||||||    
T  19650726 tataaaatcattcttgatatctagcattttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 30385539 - 30385670
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30385539 atggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 30385638  T
Q  116 tataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||||||||||| || ||||||||    
T  30385639 tataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 3137309 - 3137208
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  3137309 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 3137210  T
Q  147 ct 148  Q
    ||    
T  3137209 ct 3137208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 33113964 - 33114065
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33113964 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 33114063  T
Q  147 ct 148  Q
    ||    
T  33114064 ct 33114065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 34482783 - 34482682
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  147 ct 148  Q
    ||    
T  34482683 ct 34482682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 37216948 - 37216847
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37216849  T
Q  147 ct 148  Q
    ||    
T  37216848 ct 37216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 3456234 - 3456335
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3456234 atgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 3456333  T
Q  147 ct 148  Q
    ||    
T  3456334 ct 3456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 6042047 - 6042148
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  147 ct 148  Q
    ||    
T  6042147 ct 6042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 3089589 - 3089689
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T
Q  147 c 147  Q
    |    
T  3089689 c 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 3574421 - 3574321
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  3574421 atgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 3574322  T
Q  147 c 147  Q
    |    
T  3574321 c 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 2754889 - 2754989
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T
Q  147 c 147  Q
    |    
T  2754989 c 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 37522223 - 37522323
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 37522322  T
Q  147 c 147  Q
    |    
T  37522323 c 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  146 cc 147  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 48161076 - 48161177
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||||||||||||||||||||||||| |||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T
Q  147 ct 148  Q
    ||    
T  48161176 ct 48161177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  146 cc 147  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 36864920 - 36864826
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcct 36864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 40328011 - 40328103
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 148  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcct 40328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 147  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 8361924 - 8361833
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||| |||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 8361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttc 146  Q
    |||||| ||||||||| |||||||||||||| |||||||||  |  |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  147 c 147  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| || ||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  146 c 146  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 41224414 - 41224505
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    ||||||||||| |||||| ||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||| |||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    ||||||| |||||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||| |||||| |||||||||||||| ||||||| ||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 42298032 - 42298092
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttga 107  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  42298032 atgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 41883106 - 41883031
Alignment:
Q  58 ataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttga 132  Q
    |||||| ||||||||||| |||| |||||||| |  ||||||||||||||||||||||| ||||||||||| ||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 9797017 - 9797090
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 143  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| |||||||||| |||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacatt 9797090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 2754794 - 2754729
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    ||||||||||||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 6041961 - 6041896
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||||||| |||||| || ||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 3137402 - 3137467
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 3137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 3574515 - 3574580
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 11347439 - 11347476
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtga 84  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11347439 atgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 19650888 - 19650961
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 143  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacatt 19650961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  ||| | |||||||| ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 24395110 - 24395241
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  24395110 atggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttt 24395209  T
Q  116 tataaaatcattcttgatatctaacattttcc 147  Q
    ||||||||||||||||||||||| ||||||||    
T  24395210 tataaaatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  147 c 147  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 15577739 - 15577641
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 15577641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 3962117 - 3962249
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||    
T  3962117 atggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttct 3962216  T
Q  116 tataaaatcattcttgatatctaacattttcct 148  Q
    ||||||||||||||||||||||| |||||||||    
T  3962217 tataaaatcattcttgatatctagcattttcct 3962249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 45637881 - 45637982
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  45637881 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 45637980  T
Q  147 ct 148  Q
    ||    
T  45637981 ct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  147 ct 148  Q
    ||    
T  35445667 ct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 15329444 - 15329545
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  147 ct 148  Q
    ||    
T  15329544 ct 15329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 42611981 - 42612082
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  42611981 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 42612080  T
Q  147 ct 148  Q
    ||    
T  42612081 ct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 48880822 - 48880721
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  48880822 atgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 48880723  T
Q  147 ct 148  Q
    ||    
T  48880722 ct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 30848739 - 30848839
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttc 30848838  T
Q  147 c 147  Q
    |    
T  30848839 c 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 4974630 - 4974532
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  || |||||||||||||||||||||||||||| |||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  147 c 147  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  63 tgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 138  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 148
Target Start/End: Original strand, 42696261 - 42696355
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||| || ||||||||||| ||||||||||||||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||   ||||||||||||||||||| |||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    |||| ||||||||||||||| ||||||||   ||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   ||||||||||||||||||| |||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 18037157 - 18037248
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||| ||||||||||||| ||||||||||||  |||||||||||| ||||||||||   |||||||| |||||||||| |||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcct 18037248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 16848140 - 16848177
Alignment:
Q  188 atcatccaatttaatttgagtcaatcttaaaccccaag 225  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16848140 atcatccaatttaatttgagtcaatcttaaaccccaag 16848177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 4974723 - 4974788
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 15329350 - 15329285
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  83 gattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||| |||||||||||||||||||| || |||||| |||| ||||||| || ||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 42611888 - 42611823
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 45637789 - 45637724
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 48880915 - 48880980
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 15577841 - 15577903
Alignment:
Q  74 tctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    ||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  81 gtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||| ||||| ||| || ||||||||  || ||||||||||||||||||| ||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 34482912 - 34482847
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatat 34482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 36073488 - 36073619
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  36073488 atggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 36073587  T
Q  116 tataaaatcattcttgatatctaacattttcc 147  Q
    ||||||||||||||||||||||| ||||||||    
T  36073588 tataaaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 22199401 - 22199530
Alignment:
Q  19 gggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttat 118  Q
    |||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22199401 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttat 22199500  T
Q  119 aaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||| |||||||||    
T  22199501 aaaatcattcttgatatctagcattttcct 22199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 2625007 - 2625108
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2625007 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttc 2625106  T
Q  147 ct 148  Q
    ||    
T  2625107 ct 2625108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 21802215 - 21802114
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T
Q  147 ct 148  Q
    ||    
T  21802115 ct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 46442014 - 46442115
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  46442014 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 46442113  T
Q  147 ct 148  Q
    ||    
T  46442114 ct 46442115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 49387782 - 49387681
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttc 49387683  T
Q  147 ct 148  Q
    ||    
T  49387682 ct 49387681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 7745007 - 7744906
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7745007 atgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 7744908  T
Q  147 ct 148  Q
    ||    
T  7744907 ct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 10442682 - 10442581
Alignment:
Q  48 tgaaagattaa-taaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T
Q  147 ct 148  Q
    ||    
T  10442582 ct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 44893108 - 44893007
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  44893108 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893009  T
Q  147 ct 148  Q
    ||    
T  44893008 ct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 53123201 - 53123302
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  53123201 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 53123300  T
Q  147 ct 148  Q
    ||    
T  53123301 ct 53123302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 44893596 - 44893696
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  44893596 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893695  T
Q  147 c 147  Q
    |    
T  44893696 c 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 9089040 - 9089138
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  9089040 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 36073121 - 36073222
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttc 36073220  T
Q  147 ct 148  Q
    ||    
T  36073221 ct 36073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 47290236 - 47290337
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  47290236 atgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 47290335  T
Q  147 ct 148  Q
    ||    
T  47290336 ct 47290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 50156473 - 50156373
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50156473 atgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 50156375  T
Q  147 ct 148  Q
    ||    
T  50156374 ct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  147 c 147  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 24128409 - 24128507
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  24128409 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 4751617 - 4751718
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||| |||||||||||||| |||||||    
T  4751617 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttc 4751716  T
Q  147 ct 148  Q
    ||    
T  4751717 ct 4751718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 31078714 - 31078613
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  31078714 atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttc 31078615  T
Q  147 ct 148  Q
    ||    
T  31078614 ct 31078613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatct 137  Q
    ||||||||||||||||||||| |||||||||||| |||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    ||||||| |||||||||||||||||||||||||||| |||||| || |||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 37219801 - 37219903
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  146 cct 148  Q
    |||    
T  37219901 cct 37219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 11314144 - 11314045
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 148  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 37934837 - 37934734
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||| ||| ||||| ||||||||||||| ||||||||| || | ||||||||||||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacatttt 37934738  T
Q  146 cctc 149  Q
    ||||    
T  37934737 cctc 37934734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  49 gaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 147  Q
    ||||| |||| |||||||||| ||||||||   |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 30563379 - 30563448
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    ||||||| ||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  30563379 atgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||||||||||| | |||||||||||  ||||||||||| ||| ||||||   ||||||||||||||||||| ||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 44744610 - 44744698
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||| |||||||||||||| | | ||||||| | ||||||||||||||||||   | ||||||||||| ||||||||||||||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  81 gtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 147  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 147  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| |||||||||| ||||||||||| ||  |||||| ||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgata 134  Q
    ||||||||| ||||||||| || |||||||||||| |||||||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 10442777 - 10442842
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 31078807 - 31078872
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 49387876 - 49387941
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 2624914 - 2624849
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| |||||||| ||||||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatat 2624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 7745100 - 7745165
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 21802310 - 21802375
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 22199338 - 22199273
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| | |||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 23964453 - 23964526
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattctt-gaatctttcttataaaatcattcttgatatctaacatt 143  Q
    |||||||| |||||||||| || ||||||||||||  ||| ||| | |||||||| |||||||||| |||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacatt 23964526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 24392744 - 24392679
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||| ||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 36073024 - 36072959
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||| ||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 46441921 - 46441856
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatat 46441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 47290143 - 47290078
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 53999020 - 53998979
Alignment:
Q  107 aatctttctt-ataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  53999020 aatctttcttgataaaatcattcttgatatctaatattttcc 53998979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 90; Significance: 1e-43; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 26106 - 26207
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  26106 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26205  T
Q  147 ct 148  Q
    ||    
T  26206 ct 26207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 16154 - 16255
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  16154 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 16253  T
Q  147 ct 148  Q
    ||    
T  16254 ct 16255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 8572 - 8605
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaag 80  Q
    ||||||||||||||||||||||||||||||||||    
T  8572 atgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 33696867 - 33696968
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 33696966  T
Q  147 ct 148  Q
    ||    
T  33696967 ct 33696968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 17175916 - 17175816
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17175916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17175817  T
Q  147 c 147  Q
    |    
T  17175816 c 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 28675318 - 28675419
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 28675417  T
Q  147 ct 148  Q
    ||    
T  28675418 ct 28675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 32702375 - 32702476
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 32702474  T
Q  147 ct 148  Q
    ||    
T  32702475 ct 32702476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 18365469 - 18365369
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  18365469 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18365370  T
Q  147 c 147  Q
    |    
T  18365369 c 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 18370733 - 18370633
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  18370733 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18370634  T
Q  147 c 147  Q
    |    
T  18370633 c 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 33695221 - 33695121
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  33695221 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttc 33695122  T
Q  147 c 147  Q
    |    
T  33695121 c 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 17705363 - 17705263
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17705363 atgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17705265  T
Q  147 ct 148  Q
    ||    
T  17705264 ct 17705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 23290976 - 23290875
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T
Q  147 ct 148  Q
    ||    
T  23290876 ct 23290875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 2309318 - 2309218
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttc 2309219  T
Q  147 c 147  Q
    |    
T  2309218 c 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 6031632 - 6031546
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 18889539 - 18889470
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  18889539 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||   ||||||||||||||||||| ||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 29693615 - 29693717
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| || |||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  146 cct 148  Q
    |||    
T  29693715 cct 29693717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 6127447 - 6127506
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttg 106  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  81 gtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||| |||||||||||||||||||  | |||||||||||||||||||||| |||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  69 tgaaatctaaaggtgattattgtgac-atgtcattcttgaatctttctta-taaaatcattcttgatatctaacattttcc 147  Q
    |||||||||| |||||||||| || | || |||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 2121058 - 2121004
Alignment:
Q  94 catgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  2121058 catgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 28675225 - 28675160
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| ||||||||||  |||||||||||||||||  |||||| |||||||| ||||||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatat 28675160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 33695315 - 33695380
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 33696773 - 33696708
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 6127352 - 6127287
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 11548576 - 11548621
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 11548621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 17176009 - 17176074
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  ||| || |||||||| ||||||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatat 17176074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 17705453 - 17705518
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 17705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 23291072 - 23291137
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 9752141 - 9752109
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaa 79  Q
    ||||||| |||||||||||||||||||||||||    
T  9752141 atgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 20305025 - 20304924
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T
Q  147 ct 148  Q
    ||    
T  20304925 ct 20304924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 44094836 - 44094968
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  44094836 atggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttct 44094935  T
Q  116 tataaaatcattcttgatatctaacattttcct 148  Q
    |||||||| |||||||||||||| |||||||||    
T  44094936 tataaaataattcttgatatctagcattttcct 44094968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 51737675 - 51737776
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  51737675 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 51737774  T
Q  147 ct 148  Q
    ||    
T  51737775 ct 51737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 37821729 - 37821629
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  37821729 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 37821630  T
Q  147 c 147  Q
    |    
T  37821629 c 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 40215158 - 40215257
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40215158 atgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 18404618 - 18404719
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  147 ct 148  Q
    ||    
T  18404718 ct 18404719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 19015574 - 19015675
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  19015574 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttc 19015673  T
Q  147 ct 148  Q
    ||    
T  19015674 ct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 36966603 - 36966502
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  36966603 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttc 36966504  T
Q  147 ct 148  Q
    ||    
T  36966503 ct 36966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 41876337 - 41876236
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  41876337 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 41876238  T
Q  147 ct 148  Q
    ||    
T  41876237 ct 41876236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 9910186 - 9910086
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 9910087  T
Q  147 c 147  Q
    |    
T  9910086 c 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 25463846 - 25463946
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  25463846 atgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 25463945  T
Q  147 c 147  Q
    |    
T  25463946 c 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 25973577 - 25973677
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  25973577 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25973676  T
Q  147 c 147  Q
    |    
T  25973677 c 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T
Q  147 c 147  Q
    |    
T  3559887 c 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 6883657 - 6883757
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  6883657 atgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6883756  T
Q  147 c 147  Q
    |    
T  6883757 c 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 33786516 - 33786425
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 33786425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 44690914 - 44690818
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||| |||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||| ||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 10167569 - 10167671
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaat-ctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||| |||||||||| |||||||||||||||||||||||||||  ||| | |||||| |||  ||| |||||||||||||||| |||| |||||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  146 cct 148  Q
    |||    
T  10167669 cct 10167671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattt 144  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||| |||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 27523143 - 27523049
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 148  Q
    ||||||||| ||||| ||||| || |||||||| | || |||   ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  27523143 ttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcct 27523049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 143  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| | |||||| ||||||||||||| ||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  75 ctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttc 146  Q
    |||| ||||| |||| || ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 16045786 - 16045851
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 40215065 - 40215000
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 52329453 - 52329508
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatc 110  Q
    ||||||| | |||||||||||||| |||||||||| ||  ||||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 18404519 - 18404454
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    ||||||||||||||||||| |  |||||||||||| ||  |||||| |||||||| ||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatat 18404454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 25463753 - 25463688
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatat 25463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 32000255 - 32000320
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||| ||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatat 32000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 44094775 - 44094710
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 11791 - 11891
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 11890  T
Q  147 c 147  Q
    |    
T  11891 c 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 11698 - 11633
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 47988 - 48119
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  47988 atggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttct 48087  T
Q  116 tataaaatcattcttgatatctaacattttcc 147  Q
    ||||||||||||||||||||||| ||||||||    
T  48088 tataaaatcattcttgatatctagcattttcc 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgata 134  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 9293470 - 9293370
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9293470 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 9293371  T
Q  147 c 147  Q
    |    
T  9293370 c 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 10662058 - 10662158
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 10662157  T
Q  147 c 147  Q
    |    
T  10662158 c 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 33380377 - 33380477
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  33380377 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33380476  T
Q  147 c 147  Q
    |    
T  33380477 c 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 35160929 - 35161029
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35161028  T
Q  147 c 147  Q
    |    
T  35161029 c 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 13355018 - 13355119
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 13355117  T
Q  147 ct 148  Q
    ||    
T  13355118 ct 13355119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 23267957 - 23267857
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  23267957 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 23267858  T
Q  147 c 147  Q
    |    
T  23267857 c 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 31174761 - 31174633
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||    
T  31174761 atggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttct 31174662  T
Q  116 tataaaatcattcttgatatctaacattt 144  Q
    ||||||||||||||||||||||| |||||    
T  31174661 tataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 3989246 - 3989342
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatt 143  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  3989246 atgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 7475403 - 7475303
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  7475403 atgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 7475304  T
Q  147 c 147  Q
    |    
T  7475303 c 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 148  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 22592880 - 22592984
Alignment:
Q  47 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 143  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  144 ttcct 148  Q
    |||||    
T  22592980 ttcct 22592984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 147  Q
    ||||||| ||||||||||||||||||||||||| || |||||||||||| ||| |||||| || ||||||||||||||||||||||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 21936252 - 21936321
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  21936252 atgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||| ||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaa 108  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcat 126  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  102 tcttgaatctttcttataaaatcattcttgatatctaacattttcc 147  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 31174822 - 31174895
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 143  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacatt 31174895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttga 107  Q
    ||||||| ||||||||| ||| |||||||||| | ||||||||||| ||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 9293564 - 9293629
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  72 aatctaaaggtgattattgtgacatgtcattcttgaatctttctta 117  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 9723482 - 9723417
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||| ||| |||||||||| || |||||||||||| |||||||||| |||||||| ||||| ||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatat 9723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 10661964 - 10661899
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 13354923 - 13354850
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 143  Q
    |||||||| ||| |||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacatt 13354850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 21936158 - 21936093
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| |||||||| ||||||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 21936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 23268050 - 23268115
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 35160834 - 35160769
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 43330989 - 43330924
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttgaatctttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || |||||||||||||||| ||| || | |||||| ||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 41149 - 41280
Alignment:
Q  16 atggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttct 115  Q
    ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||    
T  41149 atggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttct 41248  T
Q  116 tataaaatcattcttgatatctaacattttcc 147  Q
    ||||||||||||||||||||||| ||||||||    
T  41249 tataaaatcattcttgatatctagcattttcc 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  71 aaatctaaaggtgattattgtgacatgtcattcttg-aatctttcttataaaatcattcttgatat 135  Q
    |||||||| |||||||||| || ||||||||||||| ||| ||| | |||||||| ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 4566 - 4666
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  4566 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 4665  T
Q  147 c 147  Q
    |    
T  4666 c 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 13012 - 13110
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  13012 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  81 gtgattattgtgacatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 147  Q
    |||||||||||| ||||| ||| || ||||||||  || ||||||||||||||||||| ||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University