View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17210_low_29 (Length: 229)

Name: NF17210_low_29
Description: NF17210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17210_low_29
NF17210_low_29
[»] chr4 (49 HSPs)
chr4 (95-215)||(19654636-19654756)
chr4 (1-95)||(19654411-19654505)
chr4 (14-92)||(38136351-38136429)
chr4 (3-92)||(29584879-29584968)
chr4 (5-92)||(14602686-14602773)
chr4 (8-92)||(56373375-56373459)
chr4 (3-85)||(41920076-41920158)
chr4 (14-78)||(12624692-12624756)
chr4 (14-92)||(3684219-3684297)
chr4 (14-92)||(25477221-25477299)
chr4 (14-92)||(28116536-28116614)
chr4 (14-88)||(31486484-31486558)
chr4 (14-95)||(30153250-30153331)
chr4 (5-85)||(37175060-37175139)
chr4 (7-87)||(45079847-45079927)
chr4 (14-78)||(50782774-50782838)
chr4 (14-92)||(3094178-3094256)
chr4 (14-64)||(5536493-5536543)
chr4 (14-92)||(20291336-20291414)
chr4 (1-55)||(31840081-31840135)
chr4 (14-92)||(37625156-37625234)
chr4 (7-88)||(39414225-39414306)
chr4 (14-95)||(52198756-52198837)
chr4 (5-88)||(7002169-7002253)
chr4 (8-92)||(13096573-13096656)
chr4 (14-78)||(20262439-20262503)
chr4 (12-92)||(22750873-22750953)
chr4 (8-64)||(30049421-30049477)
chr4 (8-88)||(33246532-33246612)
chr4 (9-57)||(41945838-41945886)
chr4 (14-85)||(22651460-22651531)
chr4 (17-84)||(34543701-34543768)
chr4 (14-85)||(52226015-52226086)
chr4 (16-85)||(5416907-5416974)
chr4 (14-92)||(5932883-5932960)
chr4 (14-88)||(16070427-16070501)
chr4 (14-56)||(20185723-20185765)
chr4 (14-92)||(24072763-24072841)
chr4 (12-78)||(51787765-51787831)
chr4 (14-95)||(54438506-54438587)
chr4 (14-88)||(48472530-48472605)
chr4 (14-92)||(26186786-26186864)
chr4 (8-78)||(26203120-26203190)
chr4 (8-85)||(45628112-45628190)
chr4 (1-35)||(50165869-50165903)
chr4 (8-53)||(54701357-54701402)
chr4 (14-85)||(20016521-20016590)
chr4 (14-78)||(39237634-39237698)
chr4 (14-78)||(46729302-46729365)
[»] chr3 (48 HSPs)
chr3 (1-88)||(20945337-20945424)
chr3 (12-85)||(52325543-52325616)
chr3 (14-87)||(42010863-42010936)
chr3 (14-85)||(11388116-11388187)
chr3 (14-88)||(37729066-37729140)
chr3 (8-66)||(51263071-51263129)
chr3 (14-95)||(11393917-11393998)
chr3 (14-95)||(29676769-29676850)
chr3 (15-88)||(41825174-41825247)
chr3 (3-95)||(31650695-31650787)
chr3 (14-85)||(14645929-14646000)
chr3 (12-95)||(26517245-26517328)
chr3 (14-92)||(50363022-50363100)
chr3 (9-85)||(27638117-27638193)
chr3 (8-92)||(54555957-54556041)
chr3 (14-85)||(31531465-31531536)
chr3 (14-92)||(44083621-44083700)
chr3 (14-85)||(46435770-46435841)
chr3 (17-92)||(48901550-48901625)
chr3 (17-92)||(48903116-48903191)
chr3 (5-87)||(11344544-11344626)
chr3 (7-85)||(26121320-26121398)
chr3 (8-85)||(26043008-26043085)
chr3 (39-88)||(29611854-29611903)
chr3 (7-88)||(41740010-41740091)
chr3 (12-92)||(12077776-12077856)
chr3 (14-78)||(46048517-46048581)
chr3 (1-85)||(12236263-12236349)
chr3 (17-64)||(23157093-23157140)
chr3 (14-85)||(33287861-33287932)
chr3 (14-88)||(13084395-13084469)
chr3 (14-88)||(22659575-22659649)
chr3 (15-85)||(27047218-27047288)
chr3 (14-92)||(29645353-29645431)
chr3 (27-85)||(33412013-33412071)
chr3 (14-92)||(34055895-34055973)
chr3 (13-83)||(42891413-42891483)
chr3 (13-78)||(31819400-31819465)
chr3 (14-95)||(41727268-41727349)
chr3 (14-78)||(26998890-26998954)
chr3 (14-78)||(30476036-30476100)
chr3 (17-64)||(23068032-23068078)
chr3 (14-85)||(40645669-40645740)
chr3 (95-133)||(44083833-44083871)
chr3 (14-59)||(35145235-35145280)
chr3 (14-87)||(41308814-41308887)
chr3 (14-95)||(41543637-41543718)
chr3 (14-78)||(25750522-25750586)
[»] chr8 (44 HSPs)
chr8 (8-85)||(14577691-14577768)
chr8 (14-92)||(43980615-43980693)
chr8 (8-85)||(14522643-14522720)
chr8 (5-88)||(34882657-34882740)
chr8 (14-92)||(31746437-31746515)
chr8 (14-78)||(24962411-24962475)
chr8 (6-85)||(3113572-3113651)
chr8 (5-92)||(7172206-7172293)
chr8 (13-92)||(25888590-25888669)
chr8 (14-85)||(26878767-26878838)
chr8 (17-94)||(3006811-3006888)
chr8 (12-64)||(16644096-16644148)
chr8 (19-95)||(41541550-41541626)
chr8 (14-77)||(4273955-4274018)
chr8 (6-85)||(5191588-5191666)
chr8 (14-85)||(22590371-22590442)
chr8 (14-85)||(24512206-24512277)
chr8 (15-85)||(41086971-41087041)
chr8 (14-78)||(2562776-2562840)
chr8 (14-78)||(37956117-37956181)
chr8 (13-85)||(45185306-45185378)
chr8 (14-85)||(25198285-25198356)
chr8 (14-92)||(25185026-25185104)
chr8 (15-92)||(36309628-36309703)
chr8 (14-92)||(43191509-43191587)
chr8 (7-88)||(31673586-31673666)
chr8 (19-92)||(34869831-34869904)
chr8 (14-78)||(57234-57298)
chr8 (5-53)||(2031210-2031258)
chr8 (14-62)||(24276617-24276665)
chr8 (14-78)||(45283828-45283892)
chr8 (5-88)||(14906588-14906671)
chr8 (14-85)||(36437497-36437568)
chr8 (22-88)||(14739433-14739499)
chr8 (14-64)||(17933700-17933750)
chr8 (14-92)||(38761390-38761468)
chr8 (14-92)||(38770219-38770297)
chr8 (14-92)||(40790785-40790862)
chr8 (14-92)||(44255449-44255527)
chr8 (1-38)||(23280630-23280667)
chr8 (39-92)||(30262570-30262623)
chr8 (3-92)||(37141711-37141800)
chr8 (22-66)||(27569-27613)
chr8 (1-53)||(23399836-23399888)
[»] chr1 (59 HSPs)
chr1 (9-92)||(38680465-38680548)
chr1 (5-88)||(30898597-30898680)
chr1 (3-85)||(25258314-25258396)
chr1 (3-85)||(32152142-32152224)
chr1 (3-88)||(13723512-13723597)
chr1 (14-66)||(15179405-15179457)
chr1 (14-78)||(15512825-15512889)
chr1 (14-78)||(28949008-28949072)
chr1 (5-87)||(4813497-4813579)
chr1 (17-95)||(13352832-13352910)
chr1 (14-92)||(47754672-47754750)
chr1 (12-85)||(23982629-23982702)
chr1 (19-88)||(28723687-28723756)
chr1 (15-88)||(31808006-31808079)
chr1 (16-85)||(40261592-40261661)
chr1 (14-88)||(52141209-52141285)
chr1 (12-92)||(8984691-8984771)
chr1 (14-85)||(2342899-2342970)
chr1 (14-85)||(6282469-6282540)
chr1 (14-85)||(30336054-30336125)
chr1 (19-84)||(15911590-15911655)
chr1 (14-95)||(16582528-16582609)
chr1 (3-92)||(32144295-32144384)
chr1 (6-83)||(37733932-37734009)
chr1 (14-95)||(46495304-46495385)
chr1 (39-92)||(47070991-47071044)
chr1 (12-92)||(47133469-47133550)
chr1 (5-88)||(10842315-10842396)
chr1 (6-78)||(20564762-20564834)
chr1 (5-85)||(31305304-31305384)
chr1 (1-64)||(3143792-3143855)
chr1 (6-85)||(41737112-41737191)
chr1 (14-85)||(44335284-44335355)
chr1 (14-64)||(28334273-28334323)
chr1 (14-92)||(32047437-32047515)
chr1 (14-87)||(34102331-34102404)
chr1 (14-95)||(36084965-36085046)
chr1 (15-88)||(44395531-44395604)
chr1 (14-78)||(5085133-5085197)
chr1 (14-78)||(25269372-25269436)
chr1 (14-78)||(33231835-33231899)
chr1 (5-85)||(35366021-35366101)
chr1 (14-78)||(48721912-48721976)
chr1 (14-57)||(47643537-47643580)
chr1 (27-85)||(3072147-3072205)
chr1 (12-78)||(27531092-27531158)
chr1 (14-92)||(34696913-34696991)
chr1 (14-92)||(44163227-44163305)
chr1 (15-85)||(50692405-50692475)
chr1 (3-64)||(51390592-51390654)
chr1 (14-59)||(3143398-3143443)
chr1 (14-59)||(10160714-10160759)
chr1 (43-88)||(16395582-16395627)
chr1 (3-92)||(24414984-24415073)
chr1 (7-85)||(43189091-43189171)
chr1 (15-78)||(44652905-44652965)
chr1 (13-85)||(28679858-28679929)
chr1 (14-78)||(29140698-29140762)
chr1 (7-95)||(36389040-36389128)
[»] chr7 (39 HSPs)
chr7 (8-88)||(37491654-37491734)
chr7 (12-88)||(48193609-48193685)
chr7 (5-88)||(26632833-26632916)
chr7 (5-92)||(40740937-40741024)
chr7 (3-85)||(46783879-46783961)
chr7 (14-85)||(20123446-20123517)
chr7 (7-78)||(31373743-31373814)
chr7 (14-92)||(6376164-6376242)
chr7 (5-97)||(20124175-20124267)
chr7 (14-88)||(4089535-4089609)
chr7 (22-92)||(29992979-29993049)
chr7 (14-87)||(26201004-26201077)
chr7 (14-95)||(40211305-40211386)
chr7 (5-85)||(2276615-2276695)
chr7 (14-78)||(18122087-18122151)
chr7 (14-86)||(42993225-42993297)
chr7 (7-58)||(19236132-19236183)
chr7 (13-92)||(25750363-25750442)
chr7 (13-88)||(35960373-35960448)
chr7 (14-85)||(37673733-37673804)
chr7 (5-85)||(42983652-42983734)
chr7 (14-92)||(1324704-1324782)
chr7 (14-92)||(28663752-28663829)
chr7 (14-92)||(36116317-36116395)
chr7 (27-92)||(5334426-5334491)
chr7 (14-95)||(21801084-21801165)
chr7 (13-78)||(27213482-27213547)
chr7 (14-78)||(10685081-10685145)
chr7 (14-78)||(21388238-21388302)
chr7 (12-92)||(21752522-21752602)
chr7 (14-78)||(23876033-23876097)
chr7 (20-64)||(36195393-36195437)
chr7 (14-64)||(37048031-37048081)
chr7 (14-92)||(40263707-40263785)
chr7 (12-78)||(48610181-48610247)
chr7 (13-78)||(21809692-21809757)
chr7 (12-85)||(29636078-29636151)
chr7 (28-64)||(41672626-41672662)
chr7 (14-78)||(48767560-48767624)
[»] chr5 (40 HSPs)
chr5 (7-95)||(14044525-14044613)
chr5 (1-63)||(38972185-38972247)
chr5 (14-92)||(18729584-18729662)
chr5 (14-88)||(27642498-27642572)
chr5 (14-92)||(32067824-32067902)
chr5 (14-78)||(39690530-39690594)
chr5 (14-85)||(3559064-3559135)
chr5 (14-85)||(21912116-21912187)
chr5 (13-92)||(27798151-27798230)
chr5 (8-87)||(35569040-35569119)
chr5 (14-83)||(16969370-16969439)
chr5 (12-92)||(20946081-20946161)
chr5 (22-92)||(600769-600839)
chr5 (15-85)||(15898500-15898570)
chr5 (14-92)||(34877662-34877740)
chr5 (14-88)||(43060544-43060618)
chr5 (15-92)||(41521185-41521262)
chr5 (14-88)||(10656588-10656660)
chr5 (14-85)||(21574917-21574988)
chr5 (22-85)||(24781305-24781367)
chr5 (3-92)||(4745111-4745201)
chr5 (8-78)||(27587828-27587898)
chr5 (14-92)||(36177288-36177366)
chr5 (14-92)||(4857524-4857606)
chr5 (14-95)||(15967139-15967220)
chr5 (8-85)||(36347638-36347715)
chr5 (14-78)||(11980712-11980776)
chr5 (14-78)||(29866185-29866249)
chr5 (8-59)||(20976353-20976404)
chr5 (14-85)||(30348114-30348185)
chr5 (14-64)||(33862873-33862924)
chr5 (1-92)||(42644508-42644599)
chr5 (14-92)||(25017704-25017782)
chr5 (5-54)||(4378129-4378178)
chr5 (14-55)||(4738626-4738667)
chr5 (13-78)||(7510601-7510666)
chr5 (14-87)||(10934002-10934075)
chr5 (14-78)||(3247318-3247382)
chr5 (5-57)||(36750839-36750891)
chr5 (8-88)||(43453972-43454052)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-92)||(214605-214692)
[»] chr6 (22 HSPs)
chr6 (14-88)||(31536008-31536082)
chr6 (8-95)||(22410872-22410959)
chr6 (14-85)||(31945951-31946022)
chr6 (7-85)||(12514624-12514702)
chr6 (14-78)||(19838927-19838991)
chr6 (14-85)||(3729385-3729456)
chr6 (13-91)||(15981789-15981867)
chr6 (16-88)||(28238350-28238422)
chr6 (14-92)||(9428163-9428241)
chr6 (14-95)||(5895727-5895808)
chr6 (14-78)||(4250704-4250768)
chr6 (14-78)||(11302851-11302915)
chr6 (3-78)||(3887988-3888063)
chr6 (13-92)||(16327118-16327197)
chr6 (14-88)||(11081892-11081966)
chr6 (14-78)||(1763809-1763873)
chr6 (14-85)||(10669313-10669384)
chr6 (13-92)||(16350516-16350595)
chr6 (15-53)||(5084612-5084650)
chr6 (6-79)||(8644841-8644914)
chr6 (12-87)||(10260624-10260700)
chr6 (32-88)||(33607369-33607425)
[»] chr2 (46 HSPs)
chr2 (14-78)||(20361979-20362043)
chr2 (4-88)||(21012839-21012923)
chr2 (14-92)||(8384003-8384081)
chr2 (4-88)||(2131743-2131827)
chr2 (14-78)||(17663620-17663684)
chr2 (8-92)||(44421439-44421523)
chr2 (14-88)||(27297573-27297647)
chr2 (12-78)||(44424589-44424655)
chr2 (1-78)||(13477078-13477155)
chr2 (5-78)||(26512058-26512131)
chr2 (12-85)||(45214719-45214792)
chr2 (14-85)||(247656-247727)
chr2 (12-87)||(9718208-9718283)
chr2 (14-85)||(15851527-15851598)
chr2 (5-88)||(41865703-41865786)
chr2 (14-64)||(2395798-2395848)
chr2 (14-92)||(4398555-4398632)
chr2 (14-92)||(32677471-32677549)
chr2 (14-92)||(35241739-35241817)
chr2 (14-92)||(37355032-37355110)
chr2 (14-92)||(38449745-38449823)
chr2 (1-78)||(27749495-27749572)
chr2 (14-78)||(3645319-3645383)
chr2 (3-78)||(43709903-43709979)
chr2 (14-85)||(24774861-24774932)
chr2 (14-92)||(28733821-28733897)
chr2 (14-85)||(41665706-41665777)
chr2 (13-92)||(44274698-44274777)
chr2 (14-64)||(2917156-2917206)
chr2 (7-64)||(6275626-6275684)
chr2 (14-92)||(14527620-14527697)
chr2 (14-92)||(17250992-17251070)
chr2 (14-92)||(28264982-28265060)
chr2 (14-64)||(42250935-42250985)
chr2 (15-88)||(8065107-8065180)
chr2 (5-78)||(43650021-43650094)
chr2 (15-66)||(2048885-2048936)
chr2 (12-85)||(8667632-8667706)
chr2 (23-85)||(14420682-14420744)
chr2 (15-133)||(34042055-34042164)
chr2 (40-78)||(35453778-35453816)
chr2 (43-92)||(375376-375425)
chr2 (14-83)||(920696-920765)
chr2 (27-64)||(20426950-20426987)
chr2 (14-63)||(36174852-36174901)
chr2 (26-78)||(11071676-11071728)
[»] scaffold1091 (1 HSPs)
scaffold1091 (14-88)||(1948-2022)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-92)||(49119-49210)
[»] scaffold0038 (1 HSPs)
scaffold0038 (16-88)||(38512-38584)
[»] scaffold0067 (1 HSPs)
scaffold0067 (47-95)||(35874-35922)
[»] scaffold0166 (1 HSPs)
scaffold0166 (22-85)||(23688-23750)
[»] scaffold0012 (1 HSPs)
scaffold0012 (6-78)||(99862-99934)


Alignment Details
Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 19654636 - 19654756
Alignment:
Q  95 taaagtcaaatggatgcttagatacaaggacggagggagaactagtaaaaccattgtcgtaacgttacatcatcccccaaaaaattatgataccccttaa 194  Q
    |||| ||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||  ||    
T  19654636 taaaatcaaatggatgcttagatataagaacggaggaagtactagtaaaaccattgtcgtaacgtaacatcatccgccaaaaaattatgacaccccccaa 19654735  T
Q  195 tttgtataatgaatatcaata 215  Q
    ||||||||| |||||||||||    
T  19654736 tttgtataacgaatatcaata 19654756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19654411 - 19654505
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||| |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| | || |||||| ||||||||||||||||    
T  19654411 aacatcttttatatttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctattttatgtgttgatattaccaaattatcatttatt 19654505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 38136351 - 38136429
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| | | |||||||||||||||| ||||||    
T  38136351 tttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcattt 38136429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 29584879 - 29584968
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | | | ||||||||| |||||| ||||||    
T  29584879 caccctttgcatttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattctgtgtgttaatattaccaaattgtcattt 29584968  T

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Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 14602773 - 14602686
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||| | | ||||||||| |||||| ||||||    
T  14602773 ccttttacttttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcattt 14602686  T

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Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 56373459 - 56373375
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||| |||||| | | ||||||||| |||||| ||||||    
T  56373459 tttatatttttcacatttcttaagaaaaattgttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcattt 56373375  T

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Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 41920158 - 41920076
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||||||| | |||||||| | | ||||||||| ||||||    
T  41920158 caccttttacatttttcacatttcttaagaaaagttgttagtgcaattaatatttctattttgtgtgttaatattaccaaatt 41920076  T

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Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 12624692 - 12624756
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||||    
T  12624692 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgactattttatgtgttaatatta 12624756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 3684297 - 3684219
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| |||||||| || ||  |||||||||||||||||||||| | | |||||||||| ||||||||||||    
T  3684297 tttttcacatttattaagaaagattgtcggtgtaattaatgtgtctattttgtgtattaatattattaaattatcattt 3684219  T

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Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 25477221 - 25477299
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||||| | |||||||||  ||||| ||||||    
T  25477221 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttatgtgttaatattacaaaattgtcattt 25477299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 28116614 - 28116536
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||| | ||||||||||||||| |||||||||| | | ||||||||  |||||||||||||    
T  28116614 tttttcacattttttaagaaaagttgttagtgtaattaatatgtctattttgtgtgttaatattgccaaattatcattt 28116536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 31486484 - 31486558
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||| | | |||||||||  ||||||||    
T  31486484 tttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtgttaatattactaaattatc 31486558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 30153331 - 30153250
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | |  |||||||| ||||||||| ||||||    
T  30153331 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgataatattaccaaattatcctttatt 30153250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 37175139 - 37175060
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||| | |||||||||||||||||||||| | ||| |||||||||||||||||||||| | | ||||||||| ||||||    
T  37175139 ccttttgcttttttcacatttcttaagaaaagttgtt-gtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 37175060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 45079927 - 45079847
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||  | |||||||| | | ||||||||| ||||||||    
T  45079927 ttttacctttttcacatttcttaagaaaagtagttagtgcaattaacatatctattttgtgtgttaatattagcaaattat 45079847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 50782774 - 50782838
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | |||||||||||    
T  50782774 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtcttaatatta 50782838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 3094178 - 3094256
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| |||||||||||||||| | ||||  |||||||||||||||||||| | | ||||||||| |||||| ||||||    
T  3094178 tttttgacatttcttaagaaaagttgttaaagtaattaatgtgtctattttgtgtgttaatattaccaaattgtcattt 3094256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 5536493 - 5536543
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  5536493 tttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgtttt 5536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 20291336 - 20291414
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | | || ||||||||||||||||||||| |   |||||||||  ||||||||||||    
T  20291336 tttttcacatttcttaagaaaagttggtaatgtaattaatgtgtctattttgtgggttaatattactaaattatcattt 20291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31840081 - 31840135
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgt 55  Q
    ||||||||||  |||||||| |||||||||||||||| |||||||||||||||||    
T  31840081 aacaccttttgtatttttcaaatttcttaagaaaaattgttagtgtaattaatgt 31840135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 37625234 - 37625156
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | || ||| |||||||||||| |||||| | | |||||||||  ||||||||||||    
T  37625234 tttttcacatttcttaagaaaagttgtcagtataattaatgtgtttattttgtgtgttaatattactaaattatcattt 37625156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 39414225 - 39414306
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||| ||||||| |||||||||||||| | | || || ||||||| |||||||||| | | |||||||||||||||||||    
T  39414225 ttttacttttttcatatttcttaagaaaagttgataatgcaattaatatgtctattttgtgtgttaatattatcaaattatc 39414306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 52198837 - 52198756
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||||||||||||| | || |||||||||||| ||||| || | | | ||||||||| ||||||||| ||||||    
T  52198837 tttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttctgtgtattaatattaccaaattatcttttatt 52198756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 7002169 - 7002253
Alignment:
Q  5 ccttttacatttttcacatttctt-aagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||| | ||||||||||||||| ||||||||| |||| || ||||||||| | |||||||| | ||||||||| |||||||||    
T  7002169 ccttttgcttttttcacatttctttaagaaaaattgttaatgcaattaatgtttatattttatgtgttaatattaccaaattatc 7002253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 13096656 - 13096573
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| |||||||||||| ||||||||| | ||||||||||||||||||||| | || | | ||||||||| |||||| ||||||    
T  13096656 tttacttttttcacattt-ttaagaaaagttgttagtgtaattaatgtgtctgtgttgtgtgttaatattaccaaattgtcattt 13096573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 20262503 - 20262439
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | |||||||||    
T  20262503 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 20262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 22750953 - 22750873
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||||| | ||  ||||||||||||| ||| |||| | | ||||||||| |||||| ||||||    
T  22750953 catttttcacatttcttaagaaaagttgtctgtgtaattaatgtatctgttttgtgtattaatattaccaaattgtcattt 22750873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 30049421 - 30049477
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||| |||||||||||| ||||||||| |  |||||||||||||||||||||||||    
T  30049421 tttacttttttcacattttttaagaaaagtgattagtgtaattaatgtgtctatttt 30049477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 33246612 - 33246532
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||| |||| ||||||| ||||||||| | ||||||||||||||  |||||||||| | | ||||||||| |||||||||    
T  33246612 tttaccttttccacattttttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattatc 33246532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 41945886 - 41945838
Alignment:
Q  9 ttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgt 57  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  41945886 ttacatttttcacattttttaagaaaaattgtcagtgtaattaatgtgt 41945838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 22651460 - 22651531
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| |  ||| |||||||||||||| |||||| | | ||||||||| ||||||    
T  22651460 tttttcacatttcttaagaaaatttattaatgtaattaatgtgtttattttgtatgttaatattaccaaatt 22651531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 34543701 - 34543768
Alignment:
Q  17 ttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaat 84  Q
    ||||||||||||||||||| | ||  |||||||||||||||||||||| | | ||||||||| |||||    
T  34543701 ttcacatttcttaagaaaagttgtccgtgtaattaatgtgtctattttgtgtgttaatattaccaaat 34543768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 52226015 - 52226086
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||| ||||||||  | || ||| |||||||||||||| |||||| | ||||||||||||||||    
T  52226015 tttttcacattttttaagaaatgttgtcagtataattaatgtgtctgttttatatgttaatattatcaaatt 52226086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 5416974 - 5416907
Alignment:
Q  16 tttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||| | ||| |||||  ||||||||||||||| ||| ||||||||| ||||||    
T  5416974 tttcacatttcttaagaaaagttgtttgtgta--taatgtgtctattttgtttgttaatattaccaaatt 5416907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 5932883 - 5932960
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||| | || |||||||||||||||| | |||| | | |||||||||||||||| ||||||    
T  5932883 tttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcattt 5932960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 16070427 - 16070501
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||    || |||||||||||||||||| |||| | | ||||||||| |||||||||    
T  16070427 tttttcacatttcttaagaaatgctgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattatc 16070501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 20185765 - 20185723
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtg 56  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  20185765 tttttcacatttcttaagaaaatttgttagtgtaattaatgtg 20185723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 24072763 - 24072841
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| |||||||||||||||| | || | |||||||||||||||| |||| | | |||||||||| ||||| ||||||    
T  24072763 ttttttacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcattt 24072841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 51787765 - 51787831
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||||| | ||  ||||||||||||||||| |||| | | |||||||||    
T  51787765 catttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatatta 51787831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 54438506 - 54438587
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||||||||||||||| ||  || ||||||| |||||| |||| | | |||||||||  |||||||| ||||||    
T  54438506 tttttcacatttcttaagaaaaattgtccgtataattaaagtgtctgttttgtgtgttaatattacgaaattatcctttatt 54438587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 48472605 - 48472530
Alignment:
Q  14 tttttcacatttctt-aagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||| || ||||||| | || ||||||||||||||||||||||| | | |||||||||  ||||||||    
T  48472605 tttttcacatttttttaagaaaagttgtcagtgtaattaatgtgtctattttgtgtgttaatattacgaaattatc 48472530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 26186864 - 26186786
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||| || ||| ||||||| ||||||  | | |||||| | | |||||||||||||||| ||||||    
T  26186864 tttttcacatttcttaataataattgttagtgcaattaagatatttattttgtgtgttaatattatcaaattgtcattt 26186786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 26203120 - 26203190
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||| |||| ||||||| ||||||||| | |||| |||||||||||| | |||||||| | |||||||||    
T  26203120 tttactttttccacatttattaagaaaagttgttactgtaattaatgtatatattttatgtgttaatatta 26203190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 45628190 - 45628112
Alignment:
Q  8 tttacatttttcacatttctt-aagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||| ||||||||||||| || ||||||| | |||||||||||| |||||||| |||| | | ||||||||| ||||||    
T  45628190 tttatatttttcacatttttttaagaaaagttgttagtgtaattgatgtgtctgttttgtgtattaatattaccaaatt 45628112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 50165903 - 50165869
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaa 35  Q
    |||||||||||||||||||| ||||||||||||||    
T  50165903 aacaccttttacatttttcatatttcttaagaaaa 50165869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 54701402 - 54701357
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaat 53  Q
    |||||||||||||||||| ||||||||| | || ||||||||||||    
T  54701402 tttacatttttcacattttttaagaaaagttgtcagtgtaattaat 54701357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 20016521 - 20016590
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||| ||||||||  ||||||||| ||||||  |||||||||| | | ||||||||| ||||||    
T  20016521 tttttcacattttttaagaaaggtagttagtgcaattaa--tgtctattttgtatgttaatattaccaaatt 20016590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 39237698 - 39237634
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||| ||||||||| | || |||||||||||||| ||| |||| | | |||||||||    
T  39237698 tttttcacattttttaagaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatatta 39237634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 46729302 - 46729365
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||| ||||||||| | || |||||||||||||||||| |||| | | |||||||||    
T  46729302 tttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 46729365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20945424 - 20945337
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||| | |||||||    
T  20945424 aacaccttttacatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttatgtgttaatattacctaattatc 20945337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 52325616 - 52325543
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| | ||||||||||||||||    
T  52325616 catttttcacatttcttaagaaaaaatgttagtgtaattaatgtgtctattttatgtgttaatattatcaaatt 52325543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 42010863 - 42010936
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||| | | ||||||||||||||||||    
T  42010863 tttttcacatttcttaagaaaatttgttaatgtaattaatgtgtctattttgtgtgttaatattatcaaattat 42010936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 11388116 - 11388187
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||   | ||||||||| ||||||    
T  11388116 tttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattttgcgtgttaatattaccaaatt 11388187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 37729140 - 37729066
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| | | |||||||||||| ||||||    
T  37729140 tttttcacatttcttaagaaaaattgttaatataattaatgtgtctattttgtgtgttaatattatcatattatc 37729066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 51263071 - 51263129
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttat 66  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  51263071 tttacatttttcacatttcttaaaaaaaattgttagtgtaattaatgtgtctgttttat 51263129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 11393917 - 11393998
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||| |||| |||| | |||||||||||||||||||||||||| | | |||||| ||||||||| |||||||||    
T  11393917 tttttcacattttttaaaaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatactatcaaattgtcatttatt 11393998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 29676850 - 29676769
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||||||||  ||||| || ||||||    
T  29676850 tttttcatatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgtgttaatattacgaaattgtcttttatt 29676769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 41825247 - 41825174
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||| |||||||||||| | || ||||||||||||||||||||||||| | ||||||||| |||||||||    
T  41825247 ttttcacacttcttaagaaaagttgtcagtgtaattaatgtgtctattttatgtgttaatattaccaaattatc 41825174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 31650787 - 31650695
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||| ||| |||||||||||||| |||| |||||| |||| || |||||||||||||||||||| |  |||||||| |||||| |||||||||    
T  31650787 caccctttgcatttttcacatttattaaaaaaaattgttaatgcaattaatgtgtctattttatgtggtaatattaccaaattgtcatttatt 31650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 14646000 - 14645929
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||| ||||||||| | |||||||||||||||||||||||||| | | ||||||||| ||||||    
T  14646000 tttttcacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 14645929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 26517328 - 26517245
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||||||||||||||| | || |||||||||||||||||| |||| | | ||||||||| |||||| || ||||||    
T  26517328 catttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttctgtgttaatattaccaaattgtcctttatt 26517245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 50363022 - 50363100
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||||| || |||||||||||| ||||| |||||| | ||||||||| |||||| ||||||    
T  50363022 tttttcacattttttaagaaaaattgtcagtgtaattaatatgtctgttttatgtattaatattaccaaattgtcattt 50363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 27638193 - 27638117
Alignment:
Q  9 ttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||| |||||||||||||||||||||| |  |||||||||||||||| |||||||| | | |||||||||| |||||    
T  27638193 ttacctttttcacatttcttaagaaaagttattagtgtaattaatgtctctattttgtgtgttaatattataaaatt 27638117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 54556041 - 54555957
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||| ||||||||| |||    ||||||||||||||| |||||||||||| | ||||| ||| |||||||||||||    
T  54556041 tttacatttttcatatttcttaataaatgctgttagtgtaattaatatgtctattttatatgttaattttaccaaattatcattt 54555957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 31531536 - 31531465
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | || |||||||||||||    
T  31531536 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttgatattatcaaatt 31531465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 44083621 - 44083700
Alignment:
Q  14 tttttcacatttctt-aagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| || ||||||||| |||| |||||||||||| |||||||| | | ||||||||| |||||||||||||    
T  44083621 tttttcacatttttttaagaaaaattgttattgtaattaatgtatctattttgtgtgttaatattaccaaattatcattt 44083700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 46435841 - 46435770
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | ||||||||| ||||||    
T  46435841 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaatt 46435770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 48901625 - 48901550
Alignment:
Q  17 ttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||||| | | |||||||||  ||||| ||||||    
T  48901625 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcattt 48901550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 48903191 - 48903116
Alignment:
Q  17 ttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||||| | | |||||||||  ||||| ||||||    
T  48903191 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcattt 48903116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 11344544 - 11344626
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    |||||| | |||||||||||||||||||||| |  || |||||||||||||||||||||| | | |||| |||| ||||||||    
T  11344544 ccttttgcttttttcacatttcttaagaaaagttattggtgtaattaatgtgtctattttgtgtgttaacattaccaaattat 11344626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 26121320 - 26121398
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||| ||||||| |||||||||||||||| | || |||||||||||||||| | |||| | | ||||||||||||||||    
T  26121320 ttttgcattttttacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaatt 26121398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 26043008 - 26043085
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||| |||||||||||||||||| || |||||||||||| ||||| |||| | | ||||| ||| ||||||    
T  26043008 tttacattttttacatttcttaagaaaaattgtcagtgtaattaatatgtctgttttgtgtgttaatgttaccaaatt 26043085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 29611854 - 29611903
Alignment:
Q  39 gttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||||||| | | |||||||||||||||||||    
T  29611854 gttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattatc 29611903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 41740091 - 41740010
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||| |||||||||||| |||||||||||  ||| |  |||||||||||||||||| | | ||||||||| |||||||||    
T  41740091 ttttacttttttcacattttttaagaaaaattattaatacaattaatgtgtctattttgtgtgttaatattaccaaattatc 41740010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 12077856 - 12077776
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||| |||||||||||||| | || |||||||||||||||||| |||| | | |||||||||  ||||| ||||||    
T  12077856 catttttcaaatttcttaagaaaagttgtcagtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcattt 12077776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 46048517 - 46048581
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | |||||||||    
T  46048517 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtattaatatta 46048581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12236263 - 12236349
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaa--tagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||| ||||||||||| |||||| |||||  | |||| ||||||||||||| |||||| |  | ||||||||||||||||    
T  12236263 aacaccttttatatttttcacatctcttaaaaaaaaatttgttaatgtaattaatgtggctatttcacgtgttaatattatcaaatt 12236349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 23157093 - 23157140
Alignment:
Q  17 ttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||||||||||||||| || |||||||||||||||||| ||||    
T  23157093 ttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgtttt 23157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 33287861 - 33287932
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| |   ||||||||||||| |||||||||| | | |||||||||| |||||    
T  33287861 tttttcacatttcttaagaaaagtttgtagtgtaattaatttgtctattttgtgtgttaatattattaaatt 33287932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 13084469 - 13084395
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||| |||||||||||||| | || ||| |||||||||||||| |||| | | ||||||||| |||||||||    
T  13084469 tttttcatatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaattatc 13084395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 22659575 - 22659649
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||| |||||||||||||||| | |||||| |||||||||| | |||||| | | ||||||||| |||||||||    
T  22659575 ttttttacatttcttaagaaaagttgttagtataattaatgtatttattttgtgtgttaatattaccaaattatc 22659649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 27047288 - 27047218
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||| ||||||||||   ||||||| |||||||||||||||||| | | ||||||||| ||||||    
T  27047288 ttttcacattccttaagaaaagctgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaatt 27047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 29645353 - 29645431
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||  | ||||||||||||||||| ||| |||||| | |||||||||  ||||| ||||||    
T  29645353 tttttcacatttattaagaaatgttgttagtgtaattaatgtatctgttttatgtgttaatattacgaaattgtcattt 29645431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 33412071 - 33412013
Alignment:
Q  27 ttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||| ||||||| |||||||||||||||||| | | ||||||||| ||||||    
T  33412071 ttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaatt 33412013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 34055973 - 34055895
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||| |||||| || | |||||||||| ||||| |||| | | |||||||||| ||||| ||||||    
T  34055973 tttttcacatttcttaaaaaaaattgtcaatgtaattaatatgtctgttttgtgtgttaatattatgaaattgtcattt 34055895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 42891413 - 42891483
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaa 83  Q
    ||||||||||||||||||||||| | |||||| |||||||| ||||| |||| | | ||||||||| ||||    
T  42891413 atttttcacatttcttaagaaaagttgttagtataattaatttgtctgttttgtgtgttaatattaccaaa 42891483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 31819400 - 31819465
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||||||||| |  |  ||||||||||||||||| |||||| | |||||||||    
T  31819400 atttttcacatttcttaagaaaagttatcggtgtaattaatgtgtctgttttatgtgttaatatta 31819465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 41727349 - 41727268
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    ||||||||||||||||| |||| | || |||||||||||||||||| |||| | | |||||||||  ||||| || ||||||    
T  41727349 tttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcctttatt 41727268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 26998890 - 26998954
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | || | | |||||||||| |||||||| ||| |||||||||    
T  26998890 tttttcacatttcttaagaaaagttgtcattataattaatgtatctattttgtttgttaatatta 26998954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 30476036 - 30476100
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||| ||||||||| | || |||||||||||||||||| |||| | | |||||||||    
T  30476036 tttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 30476100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 23068032 - 23068078
Alignment:
Q  17 ttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  23068032 ttcacattt-ttaagaaaaattgttattgtaattaatgtgtctatttt 23068078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 40645669 - 40645740
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||  | ||  ||||||||||||||||| |||| | | ||||||||| ||||||    
T  40645669 tttttcacatttcttaagaaatgttgtctgtgtaattaatgtgtctgttttgtgtgttaatattaccaaatt 40645740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 44083833 - 44083871
Alignment:
Q  95 taaagtcaaatggatgcttagatacaaggacggagggag 133  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  44083833 taaagtcaaatggatgcttagatatagggacggagggag 44083871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 35145235 - 35145280
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtct 59  Q
    |||||||||||||||||||||| | || ||||||||||| ||||||    
T  35145235 tttttcacatttcttaagaaaagttgtgagtgtaattaacgtgtct 35145280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 41308887 - 41308814
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    ||||||||||||||||| |||  | || |||||||||||||||||| |||| | | ||||||||| ||| ||||    
T  41308887 tttttcacatttcttaaaaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaatttat 41308814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 41543718 - 41543637
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    ||||||||||||||||| |||| | ||  ||||| |||||||||||||||| | |  ||||||||| ||||| || ||||||    
T  41543718 tttttcacatttcttaaaaaaagttgtctgtgtatttaatgtgtctattttgtgtgataatattataaaattgtcttttatt 41543637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 25750522 - 25750586
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||| |||||||||||||||  | |||| |||||||||| |||||||||| | | |||||||||    
T  25750522 ttttttacatttcttaagaaaggttgttaatgtaattaatttgtctattttgtgtgttaatatta 25750586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 14577768 - 14577691
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  14577768 tttacatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtttgttaatattaccaaatt 14577691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 43980693 - 43980615
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||||  ||||||||||||    
T  43980693 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcattt 43980615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 14522720 - 14522643
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| | | ||||||||| ||||||    
T  14522720 tttacatttttcacatttcttaagaaaaattgttagtgtaattaatgtgtatgttttgtgtgttaatattaccaaatt 14522643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 34882657 - 34882740
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||  |||||||||||| ||||||||||| |||| || |||||||||||||||||| | | |||||||||||||||||||    
T  34882657 ccttttatttttttcacattttttaagaaaaattgttaatgcaattaatgtgtctattttgtgtgttaatattatcaaattatc 34882740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 31746515 - 31746437
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| | | |||||||||  ||||| ||||||    
T  31746515 tttttcacatttcttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattacaaaattgtcattt 31746437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 24962475 - 24962411
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||||    
T  24962475 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatta 24962411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 3113651 - 3113572
Alignment:
Q  6 cttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||||||||||||||| ||||||  | |||||||||||| ||||| |||| | | ||||||||||||||||    
T  3113651 cttttacatttttcacatttcttaaaaaaaattatcagtgtaattaatatgtctgttttgtgtgttaatattatcaaatt 3113572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 7172206 - 7172293
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||| | |||||||||||||||||||||| |  || |||||||||||||||||||||| | | |||||||||| ||||| ||||||    
T  7172206 ccttttgcttttttcacatttcttaagaaaactttttggtgtaattaatgtgtctattttgtgtgttaatattataaaattgtcattt 7172293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 25888590 - 25888669
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||| |||||||||||||||| | ||||||||||||||| |||||||||| | | |||||||||||| ||| ||||||    
T  25888590 attttttacatttcttaagaaaagttgttagtgtaattaatatgtctattttgtatgttaatattatcatattgtcattt 25888669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 26878838 - 26878767
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||| | | ||||||||| ||||||    
T  26878838 tttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctattttgtgtgttaatattaccaaatt 26878767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 3006888 - 3006811
Alignment:
Q  17 ttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttat 94  Q
    |||| |||||||||||||| | |||||| |||||||| |||||||||||| | |||||||||  ||||||||||||||    
T  3006888 ttcatatttcttaagaaaagttgttagtataattaatatgtctattttatgtgttaatattactaaattatcatttat 3006811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 16644148 - 16644096
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  16644148 catttttcacatttcttaagaaaagttgttagtgtaattaatgtgtatatttt 16644096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 41541550 - 41541626
Alignment:
Q  19 cacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    ||||||||||||||||||||||||||  || ||||||||||||||| | | | |||||||||||||| || ||||||    
T  41541550 cacatttcttaagaaaaatagttagtacaactaatgtgtctattttgtgtgtcaatattatcaaattgtcctttatt 41541626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 4274018 - 4273955
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatt 77  Q
    ||||||||||||||||||||| || ||||||||||||||||||| | |||||| | ||||||||    
T  4274018 tttttcacatttcttaagaaatattgttagtgtaattaatgtgtttgttttatgtgttaatatt 4273955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 5191666 - 5191588
Alignment:
Q  6 cttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||| |||||||||||||||||||||||||| ||||| | ||||||||||||| |||| | | ||||||||| ||||||    
T  5191666 cttttgcatttttcacatttcttaagaaaaattgttag-gcaattaatgtgtctgttttgtgtgttaatattaccaaatt 5191588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 22590371 - 22590442
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||| | | ||||||| | ||||||    
T  22590371 tttttcacatttcttaagaaaatttgttagtgcaattaatgtgtctattttttgtgttaatatcaccaaatt 22590442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 24512277 - 24512206
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||| ||||||||| | || |||||||||||||||||| |||| | | ||||||||||||||||    
T  24512277 tttttcacattttttaagaaaatttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaatt 24512206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 41086971 - 41087041
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||| || || ||||||||||||||||||  ||| | | ||||||||||||||||    
T  41086971 ttttcacatttcttaagaaatattgtcagtgtaattaatgtgtctgatttgtgtgttaatattatcaaatt 41087041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 2562840 - 2562776
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||||  || |||||||||||||||||| |||| | | |||||||||    
T  2562840 tttttcacatttcttaagaaaaactgtcagtgtaattaatgtgtctgttttgtatgttaatatta 2562776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 37956117 - 37956181
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | |||||||||    
T  37956117 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 37956181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 45185378 - 45185306
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||||||||||||| | ||   |||||| ||||||||| |||||| | ||||||||||||||||    
T  45185378 atttttcacatttcttaagaaaagttgtcgttgtaataaatgtgtctgttttatgtattaatattatcaaatt 45185306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 25198285 - 25198356
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | || |||||||||||||||| | |||| | | ||||||||| ||||||    
T  25198285 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattaccaaatt 25198356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 25185026 - 25185104
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | || ||||||| |||||||||| |||| | | |||||||||  ||||| ||||||    
T  25185026 tttttcacatttcttaagaaaagttgtcagtgtaactaatgtgtctgttttgtgtgttaatattacgaaattgtcattt 25185104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 36309703 - 36309628
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||  ||| | ||||  |||||||||||||||||||| | | |||||||||||||||| ||||||    
T  36309703 ttttcacatttcttaa--aaatttgttaccgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcattt 36309628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 43191587 - 43191509
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| |||||||||||||||||  |||| | || |||||||||||||||||| | |||||||||  ||||| ||||||    
T  43191587 ttttttacatttcttaagaaaaaatgttaatttagttaatgtgtctattttatgtgttaatattactaaattgtcattt 43191509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 31673586 - 31673666
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||| |||||||||||| ||||||||| | ||  ||||||||||||||| |||||| | | ||||||||| |||||||||    
T  31673586 ttttacttttttcacattttttaagaaaagttgtg-gtgtaattaatgtgtttattttgtatgttaatattaccaaattatc 31673666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 34869831 - 34869904
Alignment:
Q  19 cacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||| ||||||||||| ||  |||||| |||||||| |||||| | | |||||||||||||||| ||||||    
T  34869831 cacattttttaagaaaaattgtcggtgtaactaatgtgtatattttgtgtattaatattatcaaattgtcattt 34869904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 57298 - 57234
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | ||  ||||||||||||||||| |||| | | |||||||||    
T  57298 tttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatatta 57234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 2031210 - 2031258
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaat 53  Q
    |||||||||||||||| ||||||| |||||||| ||||||| |||||||    
T  2031210 ccttttacatttttcatatttcttcagaaaaattgttagtgcaattaat 2031258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 24276665 - 24276617
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatt 62  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  24276665 tttttcacatttcttaaaaaaagttgttagtataattaatgtgtctatt 24276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 45283892 - 45283828
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||| ||||||||||||||||  | | |||||||||||||||| |||||| | |||||||||    
T  45283892 tttttcaaatttcttaagaaaaattatcaatgtaattaatgtgtctgttttatgtgttaatatta 45283828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 14906588 - 14906671
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||| |||||||||||| || | |||| |  ||| |||||||||| |||||||||| | | ||||||||| |||||||||    
T  14906588 ccttttacttttttcacattttttcataaaagttattaatgtaattaatatgtctattttgtgtgttaatattaccaaattatc 14906671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 36437497 - 36437568
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||| ||||||| ||||||||||  ||||||| |||||||||||||||||| | | |||| |||| ||||||    
T  36437497 ttttccacattttttaagaaaaaatgttagtgcaattaatgtgtctattttgtgtgttaacattaccaaatt 36437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 14739433 - 14739499
Alignment:
Q  22 atttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||| ||||||||| | ||  ||||||||||||||| |||||||| | ||||||||| |||||||||    
T  14739433 attttttaagaaaagttgtccgtgtaattaatgtgtttattttatatgttaatattaccaaattatc 14739499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 17933700 - 17933750
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||||||| |||||||||| ||   |||||||||||||||||||||    
T  17933700 tttttcacatttcgtaagaaaaattgtcgatgtaattaatgtgtctatttt 17933750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 38761468 - 38761390
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||| |||| |||| |||| | || |||||||||||||||||| |||| | | |||||||||| ||||| ||||||    
T  38761468 tttttcatatttattaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcattt 38761390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 38770297 - 38770219
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||| ||||||||||| || | || |||||||||||||||| |||||| | | |||||||||  ||||| ||||||    
T  38770297 tttttcatatttcttaagataagttgtcagtgtaattaatgtgtttattttgtgtgttaatattacgaaattgtcattt 38770219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 40790785 - 40790862
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | || ||||||||||||| ||||  ||| | | ||||||||| |||||| ||||||    
T  40790785 tttttcacatttcttaagaaaagttgtcagtgtaattaatgcgtct-gtttgtgtattaatattaccaaattgtcattt 40790862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 44255449 - 44255527
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| |||||||||   || || |||||||||||| || |||| | | |||||||||||||||| ||||||    
T  44255449 tttttcacatttgttaagaaaagatgtgagcgtaattaatgtgccttttttgtgtgttaatattatcaaattgtcattt 44255527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23280630 - 23280667
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaata 38  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  23280630 aacaccttttgcatttttcatatttcttaagaaaaata 23280667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 30262623 - 30262570
Alignment:
Q  39 gttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||| |||||||||||||||||| | | ||||||||| |||||| ||||||    
T  30262623 gttagtgcaattaatgtgtctattttgtatgttaatattaccaaattgtcattt 30262570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 37141711 - 37141800
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| || |||||||||||||| |||| |||| | || |||||||||||||| ||| |||| | | |||||||||  ||||| ||||||    
T  37141711 cacctattgcatttttcacattttttaaaaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcattt 37141800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 27569 - 27613
Alignment:
Q  22 atttcttaagaaaaatagttagtgtaattaatgtgtctattttat 66  Q
    |||||||||||||||| |||||||| || |||| |||||||||||    
T  27569 atttcttaagaaaaattgttagtgttatgaatgcgtctattttat 27613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23399888 - 23399836
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaat 53  Q
    |||||||||| ||||||||| |||||||||||||| | ||||  |||||||||    
T  23399888 aacaccttttgcatttttcatatttcttaagaaaagttgttaccgtaattaat 23399836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 38680465 - 38680548
Alignment:
Q  9 ttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||||| | | |||||||||||||||| ||||||    
T  38680465 ttacttttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcattt 38680548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 30898680 - 30898597
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||| | |||||||||||||||||||||||| || |||||||||||||||||| |||||| | ||||||||| |||||||||    
T  30898680 ccttttgcttttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatc 30898597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 25258314 - 25258396
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||| |||| ||||||||| | ||||||| |||||||||||||||||||| |||| |||||| ||||||    
T  25258314 caccttttacatttttcatattttttaagaaaagttgttagtgcaattaatgtgtctattttatgtcttgatattaccaaatt 25258396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 32152142 - 32152224
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||||||||||||||||||||||| | ||| ||| |||||||||||||||||| | | ||||||||| ||||||    
T  32152142 caccttttacatttttcacatttcttaagaaaagttgttggtgcaattaatgtgtctattttgtgtgttaatattaccaaatt 32152224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 13723597 - 13723512
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||| ||| |||||||||||||||||||||||| | ||||||| |||||||||||||||||| | | ||||||||| |||||||||    
T  13723597 caccctttgcatttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtattaatattaccaaattatc 13723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 15179405 - 15179457
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttat 66  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  15179405 tttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctattttat 15179457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 15512889 - 15512825
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||||    
T  15512889 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatta 15512825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 28949072 - 28949008
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||||    
T  28949072 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatta 28949008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 4813579 - 4813497
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    |||||| | |||||||||||||||||||||| | |||| || |||||||||||||||||| | | ||||||||| ||||||||    
T  4813579 ccttttgcttttttcacatttcttaagaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattaccaaattat 4813497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 13352832 - 13352910
Alignment:
Q  17 ttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    ||||||||||||||||||  ||||||||  ||||||||||||| |||||| | ||||||||| |||||| |||||||||    
T  13352832 ttcacatttcttaagaaatgtagttagttcaattaatgtgtctgttttatgtgttaatattagcaaattgtcatttatt 13352910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 47754750 - 47754672
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| ||||||||||| |||||| ||||||| |||||||||||||||||| | | ||||||||| |||||| ||||||    
T  47754750 ttttttacatttcttaaaaaaaattgttagtgcaattaatgtgtctattttttgtgttaatattaccaaattgtcattt 47754672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 23982702 - 23982629
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||||| | || | |||||||||||||||| |||| | | ||||||||||||||||    
T  23982702 catttttcacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatattatcaaatt 23982629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 28723756 - 28723687
Alignment:
Q  19 cacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||| | | ||||||||| |||||||||    
T  28723756 cacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatc 28723687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 31808079 - 31808006
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||| ||||| |||||| | |||||||||||||||||||||||||| | | ||||||||| |||||||||    
T  31808079 ttttcacacttcttgagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatc 31808006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 40261592 - 40261661
Alignment:
Q  16 tttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||| ||||| ||||||||| ||||||||||| |||||| | | ||||||||||||||||    
T  40261592 tttcacatttcttatgaaaagtagttagtgcaattaatgtgtttattttgtgtgttaatattatcaaatt 40261661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 52141285 - 52141209
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaat--gtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||| |||||||||||  ||||||||||||||  ||||||||||| | | |||||||||||||||||||    
T  52141285 tttttcacattttttaagaaaaattattagtgtaattaatgcgtgtctattttgtgtgttaatattatcaaattatc 52141209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 8984771 - 8984691
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||| | | |||||||||  ||||| ||||||    
T  8984771 catttttcacattttttaaggaaaattgttagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcattt 8984691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 2342899 - 2342970
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||| ||||||||||| |||||| || |||||||||||||||| | | ||||||||| ||||||    
T  2342899 tttttcacattttttaagaaaaattgttagtttacttaatgtgtctattttgtgtgttaatattaccaaatt 2342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 6282469 - 6282540
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||| |||| |||||||||| ||||||  |||||||||||||||||||| | |||||||||| |||||    
T  6282469 tttttcacgtttcataagaaaaattgttagtacaattaatgtgtctattttatgtgttaatattataaaatt 6282540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 30336054 - 30336125
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | ||  |||||||||||||||||||||| | | ||||||||| ||||||    
T  30336054 tttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 30336125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 15911655 - 15911590
Alignment:
Q  19 cacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaat 84  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||| | | ||||||||| |||||    
T  15911655 cacatttcttaagaaaagttgttagtgtacttaatgtgtctattttgtgtgttaatattaccaaat 15911590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 16582528 - 16582609
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | |||||||||  ||||| || ||||||    
T  16582528 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcttttatt 16582609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 32144295 - 32144384
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||| ||||||| |||||||||||||||| | ||| ||| | |||||||||||||||| |   ||||||||| |||||| ||||||    
T  32144295 caccttttgcattttttacatttcttaagaaaagttgttggtgcatttaatgtgtctattttgtgcgttaatattaccaaattgtcattt 32144384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 37734009 - 37733932
Alignment:
Q  6 cttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaa 83  Q
    ||||| |||||||||||||| ||| ||||||| ||||||| ||||||| |||| ||||| | | ||||||||||||||    
T  37734009 cttttgcatttttcacattttttacgaaaaattgttagtgcaattaatttgtccattttgtgttttaatattatcaaa 37733932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 46495304 - 46495385
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||| | || |||||| || |||||||||||||||||| |||| | | |||||||||||||||| || ||||||    
T  46495304 tttttcacatttttaaaaaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttatt 46495385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 47071044 - 47070991
Alignment:
Q  39 gttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||| ||||||    
T  47071044 gttagtgtaattaatgtgtctattttatgtgttaatattaccaaattgtcattt 47070991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 47133550 - 47133469
Alignment:
Q  12 catttttcacatttcttaagaaaaa-tagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||||| ||||| | |||| |||||||||||||| |||||| | | |||||||||| ||||| ||||||    
T  47133550 catttttcacatttcttaaaaaaaaattgttaatgtaattaatgtgtttattttgtgtgttaatattattaaattgtcattt 47133469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 10842315 - 10842396
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||  | | ||||||||| |||||||||    
T  10842315 ccttttacttttttcacatttcttaagaaaagttgttaatgcaattaatatgtctattt--tgtgttaatattaccaaattatc 10842396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 20564762 - 20564834
Alignment:
Q  6 cttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||| |||||||||||||| ||||||||| | | |||||||| ||||||||||| ||||| | |||||||||    
T  20564762 cttttgcatttttcacatttgttaagaaaagttgatagtgtaactaatgtgtctactttatgtgttaatatta 20564834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 31305304 - 31305384
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||| | |||||||||||| ||||||||| | ||| |||||||||||||||||||||| | |  |||||||| ||||||    
T  31305304 ccttttgcttttttcacatttattaagaaaagttgttggtgtaattaatgtgtctattttgtatgctaatattaccaaatt 31305384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3143855 - 3143792
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||||  |||||||| || ||||||||||| | | ||||||||||||||||||||||||    
T  3143855 aacaccttttgtatttttcatatgtcttaagaaaagttgatagtgtaattaatgtgtctatttt 3143792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 41737112 - 41737191
Alignment:
Q  6 cttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||| ||||| ||||| |||||||||||| | ||||||||||||||  |||||||||| | | ||||||||| ||||||    
T  41737112 cttttgcatttatcacacttcttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattaccaaatt 41737191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 44335284 - 44335355
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||||||| |||| | || |||||||||||||||||| |||| | | ||||||||| ||||||    
T  44335284 tttttcacatttcttaataaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaatt 44335355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 28334323 - 28334273
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    |||||||||||||||||||||| | || |||||||||||||||||| ||||    
T  28334323 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgtttt 28334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 32047437 - 32047515
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | || |||||||||||||||| | |||| | | |||||||||  ||||| ||||||    
T  32047437 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattacgaaattgtcattt 32047515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 34102331 - 34102404
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    ||||||| |||| |||||||||||  | | |||||||||||||||| |||| | | ||||||||||||||||||    
T  34102331 tttttcaaattttttaagaaaaattttcattgtaattaatgtgtctgttttgtgtgttaatattatcaaattat 34102404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 36084965 - 36085046
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||| |||||||||||  | |||||||||||||| ||| |||| | | |||||||||  |||||||| ||||||    
T  36084965 tttttcacattttttaagaaaaattatcagtgtaattaatgtatctgttttgtgtgttaatattaagaaattatcctttatt 36085046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 44395531 - 44395604
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||||||||||||||||  | || |||||||||||| ||| |||||||| | |||||||||  ||||||||    
T  44395531 ttttcacatttcttaagaaatgttgtcagtgtaattaatatgtttattttatgtgttaatattacaaaattatc 44395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 5085197 - 5085133
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||| ||||||||| | || |||||||||||||||||| |||| | | |||||||||    
T  5085197 tttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 5085133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 25269372 - 25269436
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||| ||||||||| | || ||||||| |||||||||| |||||| | |||||||||    
T  25269372 tttttcacattttttaagaaaagttgtcagtgtaaataatgtgtctgttttatgtgttaatatta 25269436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 33231835 - 33231899
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||| |||| | || |||||||||||||||||| |||| | | |||||||||    
T  33231835 tttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 33231899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 35366101 - 35366021
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||| | ||||||| ||||||||  |||| | |||||||||| |||||| |||||||| | | ||||||||||||||||    
T  35366101 ccttttgcttttttcatatttcttactaaaagttgttagtgtaagtaatgtatctattttgtgtgttaatattatcaaatt 35366021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 48721976 - 48721912
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||||||||   || |||||||||||||||||| |||| | | |||||||||    
T  48721976 tttttcacatttcttaagaaaagctgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 48721912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 47643537 - 47643580
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgt 57  Q
    |||||||||||||||||||||| | || ||||||||||||||||    
T  47643537 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgt 47643580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 3072147 - 3072205
Alignment:
Q  27 ttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||| | ||||||| ||||||||||| |||||||| | |||||||||| |||||    
T  3072147 ttaagaaaagttgttagtgcaattaatgtgtttattttatgtgttaatattattaaatt 3072205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 27531092 - 27531158
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||||| | || ||| |||||||||||| | |||| | | |||||||||    
T  27531092 catttttcacatttcttaagaaaagttgtcagtataattaatgtgtttgttttgtgtgttaatatta 27531158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 34696991 - 34696913
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||| | || |||||||||||| ||||| |||| | | |||||||||  ||||| ||||||    
T  34696991 tttttcacattttttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatattacgaaattgtcattt 34696913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 44163227 - 44163305
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||| |||| |  | |||||||||||||||| | |||| | | |||||||||| ||||| ||||||    
T  44163227 tttttcacatttcttaaaaaaagttatcagtgtaattaatgtgtttgttttgtgtgttaatattattaaattgtcattt 44163305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 50692405 - 50692475
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||||||||||| | || | || |||||||||||||||||| | | ||| ||||| ||||||    
T  50692405 ttttcacatttcttaagaaaagttgtcaatgcaattaatgtgtctattttgtgtgttagtattaccaaatt 50692475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 51390654 - 51390592
Alignment:
Q  3 caccttttacatttttcacatttcttaa-gaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||  |||||||||||||||||| ||| ||| |||| || ||||||||||||||||||    
T  51390654 caccttttgaatttttcacatttcttaaagaagaattgttaatgcaattaatgtgtctatttt 51390592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 3143398 - 3143443
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtct 59  Q
    |||||||||||||||||||||| | || | ||||||||||||||||    
T  3143398 tttttcacatttcttaagaaaagttgtcattgtaattaatgtgtct 3143443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 10160714 - 10160759
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtct 59  Q
    |||||||||||||||||||||| |  | ||||||||||||||||||    
T  10160714 tttttcacatttcttaagaaaagttatcagtgtaattaatgtgtct 10160759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 16395627 - 16395582
Alignment:
Q  43 gtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||| | | ||||||||| |||||||||    
T  16395627 gtgtaattaatgtgtctattttgtatgttaatattaccaaattatc 16395582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 24414984 - 24415073
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||| | ||||| |||||| ||||| || || ||  ||||||||||||| ||| |||| | | ||||||||| |||||||||||||    
T  24414984 caccttttgccttttttacatttattaagtaatattgtcggtgtaattaatgtatctcttttgtgtgttaatattaccaaattatcattt 24415073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 43189091 - 43189171
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaat--taatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||| ||||| |||||||||||| | ||||||| |||  |||| |||||||||| | | ||||||||| ||||||    
T  43189091 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatatgtctattttgtatgttaatattaccaaatt 43189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 44652965 - 44652905
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||||||    ||||||||||||||||||||| |||| | | |||||||||    
T  44652965 ttttcacatttcttaagaaat---gttagtgtaattaatgtgtctgttttgtgttttaatatta 44652905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 28679929 - 28679858
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||| |||| |||| | |||| || |||||||||||||||||| | | |||||||||| |||||    
T  28679929 atttttcacattt-ttaaaaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattattaaatt 28679858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 29140762 - 29140698
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | |   ||||||||||||||||| |||| | | |||||||||    
T  29140762 tttttcacatttcttaagaaaagttgccggtgtaattaatgtgtctgttttgtgtattaatatta 29140698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 36389040 - 36389128
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||| ||||||||  |||||||||||||||  |||||   ||||||| |||||||||||||| | | |||||| ||||| || ||||||    
T  36389040 tttttcatttttcgtatttcttaagaaaaaatgttagcacaattaatatgtctattttatttgtaattattattaaattgtcttttatt 36389128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 37491734 - 37491654
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||| |||||||||||||||||||||| | ||||||| |||||||||||||||||||| | ||||||||| |||||||||    
T  37491734 tttacttttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttatatgttaatattaccaaattatc 37491654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 48193609 - 48193685
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||| | | ||||||||| |||||||||    
T  48193609 catttttcacattttttaagaaaaattgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatc 48193685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 26632833 - 26632916
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||| | |||||||||||| ||||||||||| ||||||||| |||||||||||||||||| | |||||||||  ||||||||    
T  26632833 ccttttgcttttttcacattttttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatc 26632916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 40740937 - 40741024
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||  |||||||||||||||||||||| | |||| |||||||||| |||||||||| | | ||||||||| |||||||||||||    
T  40740937 ccttttatctttttcacatttcttaagaaaagttgttaatgtaattaatatgtctattttgtgtgttaatattaccaaattatcattt 40741024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 46783961 - 46783879
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||| ||||||||||||||||||||||| |  |||||| ||||||||||||||| |||| | ||||||||| ||||||    
T  46783961 caccttttatatttttcacatttcttaagaaaagttattagtgaaattaatgtgtctatcttatgtgttaatattaccaaatt 46783879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 20123446 - 20123517
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | ||||||||||||||||    
T  20123446 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaatt 20123517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 31373814 - 31373743
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||| | | |||||||||    
T  31373814 ttttgcatttttcacatttcttaagaaaaattgttagggcaattaatgtgtctattttgtgtgttaatatta 31373743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 6376242 - 6376164
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||| | | |||||||||  ||||| ||||||    
T  6376242 tttttcacatttcttaagaaaaattgttagtgtaattaatgtctctgttttgtgtgttaatattactaaattgtcattt 6376164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 20124175 - 20124267
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttattaa 97  Q
    |||||| | |||||||||||| ||||||||| | ||| |||||||||||||||||||||||| | || | ||||  |||||||||||| ||||    
T  20124175 ccttttgcttttttcacattttttaagaaaagttgttggtgtaattaatgtgtctattttatgtattgacattactaaattatcattttttaa 20124267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 4089609 - 4089535
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | |||||||||  ||||||||    
T  4089609 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattatc 4089535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 29992979 - 29993049
Alignment:
Q  22 atttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||| | ||||||| |||||||||||||||||| | | |||||| || |||||||||||||    
T  29992979 atttcttaagaaaagttgttagtgcaattaatgtgtctattttgtatgttaatactaccaaattatcattt 29993049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 26201077 - 26201004
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    ||||||| |||||||||||||| |  |||||| ||||| |||||||||||| | | ||||||||||||||||||    
T  26201077 tttttcatatttcttaagaaaagttattagtgcaattattgtgtctattttgtgtattaatattatcaaattat 26201004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 40211386 - 40211305
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    ||||||| |||| ||||||||||| ||| ||||||||||||||||| |||| | | |||||||||  ||||| |||||||||    
T  40211386 tttttcatattttttaagaaaaattgtttgtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcatttatt 40211305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 2276695 - 2276615
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||||||| |||| | || |||||| ||||| ||||| |||| | | ||||||||| ||||||    
T  2276695 ccttttacatttttcacatttcttaacaaaagttgtcagtgtagttaatttgtctgttttgtgtgttaatattaccaaatt 2276615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 18122151 - 18122087
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | || |||||||||| ||||||| |||||| | |||||||||    
T  18122151 tttttcacatttcttaagaaaagttgtgagtgtaattagtgtgtctgttttatgtgttaatatta 18122087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 42993297 - 42993225
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatta 86  Q
    ||||| |||||||||||||||| | |||| |  |||||| ||||||||||||| | |||||||||||||||||    
T  42993297 ttttttacatttcttaagaaaagttgttaatacaattaacgtgtctattttatgtgttaatattatcaaatta 42993225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 19236183 - 19236132
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtc 58  Q
    |||| ||||||||||||||| |||||||| | ||||||||||||||||||||    
T  19236183 tttttcatttttcacatttcgtaagaaaagttgttagtgtaattaatgtgtc 19236132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 25750363 - 25750442
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||| |||| | || |||||||||||||||||| |||| | | |||||||||  ||||| ||||||    
T  25750363 atttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcattt 25750442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 35960373 - 35960448
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||| ||||| |||||| ||||||  |||||||||||||||||||| | || ||||||  ||||||||    
T  35960373 atttttcacattccttaaaaaaaattgttagtacaattaatgtgtctattttatgtatttatattactaaattatc 35960448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 37673733 - 37673804
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||  | || |||||||||||||||||| |||| | | |||||||||| |||||    
T  37673733 tttttcacatttcttaagaaatgttgtgagtgtaattaatgtgtctgttttgtgtgttaatattatgaaatt 37673804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 42983734 - 42983652
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaa--tagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||||||| |||||| |||||||  | | | ||||||||||||||||| |||||| | |||||||||| |||||    
T  42983734 ccttttacatttttcacgtttcttgagaaaaaagttgatggtgtaattaatgtgtctcttttatatgttaatattattaaatt 42983652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 1324704 - 1324782
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||  |  | |||||||||||||||||| |||| | | ||||| |||||||||| ||||||    
T  1324704 tttttcacatttcttaagaaatgttatcagtgtaattaatgtgtctgttttgtgtgttaatcttatcaaattgtcattt 1324782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 28663752 - 28663829
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||  | |||| |  |||||||||||||||||| | | |||||||||||||||||| ||||    
T  28663752 tttttcacatttcttaagaaagtt-gttaatacaattaatgtgtctattttgtgtgttaatattatcaaattattattt 28663829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 36116317 - 36116395
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||  | ||  ||||||||||||||||| |||||| | |||||||||  ||||| ||||||    
T  36116317 tttttcacatttcttaagaaatgttgtcggtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcattt 36116395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 5334491 - 5334426
Alignment:
Q  27 ttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||| ||||||||||||||||||| | |||| | | ||||||||| |||| ||||||||    
T  5334491 ttaagaaaaattgttagtgtaattaatgtgtttgttttgtatgttaatattaccaaactatcattt 5334426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 21801165 - 21801084
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||||||||||||| | ||   |||||||||||||||| |||| | | |||||||||  ||||| |||||||||    
T  21801165 tttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttatt 21801084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 27213482 - 27213547
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||||||||| | ||||||| || |||| |||||||||| | | |||||||||    
T  27213482 atttttcacatttcttaagaaaagttgttagtgcaactaatatgtctattttgtgtgttaatatta 27213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 10685081 - 10685145
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||| |||||||||||||| |  | |||||||||||||||||| |||||| | |||||||||    
T  10685081 tttttcatatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtgttaatatta 10685145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 21388238 - 21388302
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | ||  ||||||||||||||||| |||| | | |||||||||    
T  21388238 tttttcacatttcttaagaaaatttgtcggtgtaattaatgtgtctgttttgtgtgttaatatta 21388302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 21752522 - 21752602
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||| |||||||||||| |||| | ||||||| ||||||| ||| |||||| |   ||||||||| |||||||||||||    
T  21752522 cattttccacatttcttaaaaaaagttgttagtgcaattaatttgtttattttgtgggttaatattaccaaattatcattt 21752602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 23876033 - 23876097
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||| |||| | ||||||||| ||||| |||| ||||||| | |||||||||    
T  23876033 tttttcacatttcttaaaaaaagttgttagtgtagttaatatgtccattttatgtgttaatatta 23876097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 36195393 - 36195437
Alignment:
Q  20 acatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||    
T  36195393 acatttctttagaaaaattgttagtataattaatgtgtctatttt 36195437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 37048031 - 37048081
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    |||||||||||||||||||||| |  | |||||||||||||||||| ||||    
T  37048031 tttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgtttt 37048081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 40263707 - 40263785
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||| | ||  ||||||||||||||||| ||||  || |||||||||  ||||| ||||||    
T  40263707 tttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgttttgattgttaatattacaaaattgtcattt 40263785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 48610247 - 48610181
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||| ||||||||| | || | |||||||||||||||| |||| | | |||||||||    
T  48610247 catttttcacattttttaagaaaagttgtcactgtaattaatgtgtctgttttgtgtattaatatta 48610181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 21809757 - 21809692
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||||||||| | ||   |||||||||||||||| |||| | | |||||||||    
T  21809757 atttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttttgtgttaatatta 21809692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 29636151 - 29636078
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||| ||||||| ||||||||| | || | |||||||||||||||| |||| | | ||||||||| ||||||    
T  29636151 cattttacacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatattaccaaatt 29636078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 41672662 - 41672626
Alignment:
Q  28 taagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    |||||||| | ||||||||||||||||||||||||||    
T  41672662 taagaaaacttgttagtgtaattaatgtgtctatttt 41672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 48767560 - 48767624
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||| |||  | || |||||||||||||||||| |||| | | |||||||||    
T  48767560 tttttcacatttcttaaaaaacgttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 48767624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 14044613 - 14044525
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||| |||||||||||||||||||||| | |||| || | ||||| |||||||||||| | ||||||||||||||||||||||||||    
T  14044613 ttttacttttttcacatttcttaagaaaagttgttaatgcagttaatatgtctattttatgtattaatattatcaaattatcatttatt 14044525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38972247 - 38972185
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattt 63  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  38972247 aacacattttacatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattt 38972185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 18729584 - 18729662
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||| | | |||||||||| ||| ||||||||    
T  18729584 tttttcacatttcttaagaaaaattatttgtgtaattaatgtgtctattttgtgtgttaatattattaaagtatcattt 18729662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 27642498 - 27642572
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||||  ||||||||    
T  27642498 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatc 27642572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 32067824 - 32067902
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||||| | | ||||||||| |||||| ||||||    
T  32067824 ttttttacatttcttaagaaaaatagttagtgcaattcatgtgtctattttgtgtgttaatattaccaaattgtcattt 32067902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 39690594 - 39690530
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||||    
T  39690594 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatta 39690530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 3559135 - 3559064
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||| | | ||||||||| ||||||    
T  3559135 tttttcacatttcttaagaaaaattgttggtataattaatgtgtctattttgtgtgttaatattaccaaatt 3559064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 21912116 - 21912187
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||| ||||||||| | ||||||||| |||||||||||||||||| | |||||||||| |||||    
T  21912116 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattattaaatt 21912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 27798151 - 27798230
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||| |||||||| || || |||||||||||| ||||| |||| | | |||||||||||||||||||||||    
T  27798151 atttttcacattttttaagaaatattgtcagtgtaattaatttgtctgttttgtgtgttaatattatcaaattatcattt 27798230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 35569119 - 35569040
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    |||||||||||||||||||||||||||| |  | |||||||||||||||||| |||||| | |||||||||  |||||||    
T  35569119 tttacatttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtattaatattactaaattat 35569040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 16969370 - 16969439
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaa 83  Q
    |||||||||||| |||| |||||| |||||| ||||||||||||||| ||| ||| ||||||||||||||    
T  16969370 tttttcacattttttaacaaaaattgttagtataattaatgtgtctaatttgtttgttaatattatcaaa 16969439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 20946081 - 20946161
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||| |||||||||||||  | ||||||| |||||| ||||||||||| | | |||||||||||||||| ||||||    
T  20946081 catttttcatatttcttaagaaacgttgttagtgcaattaacgtgtctattttgtgtgttaatattatcaaattgtcattt 20946161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 600769 - 600839
Alignment:
Q  22 atttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||| | ||||||| |||||||||||||||| | | | |||||||||||||||| ||||||    
T  600769 atttcttaagaaaacttgttagtgcaattaatgtgtctattatgtgtgttaatattatcaaattgtcattt 600839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 15898570 - 15898500
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||| ||||||||||||| | || |||||||||||||||||| |||| | | ||||||||||||||||    
T  15898570 ttttcacttttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaatt 15898500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 34877662 - 34877740
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||  | || |||||||||||| ||||| |||| | | ||||||||| |||||||||||||    
T  34877662 tttttcacatttcttaagaaatgttgtcagtgtaattaatttgtctgttttgtgtgttaatattaccaaattatcattt 34877740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 43060618 - 43060544
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||| |||| |||| | |||||||||||||||||||||||||| | | ||||||||| || ||||||    
T  43060618 tttttcacattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccatattatc 43060544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 41521185 - 41521262
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||| |||||| ||||||||||| ||||||| ||||||| |||||||||| | | |||||||||| ||||| ||||||    
T  41521185 tttttacattttttaagaaaaattgttagtgaaattaatatgtctattttgtgtgttaatattattaaattgtcattt 41521262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 10656588 - 10656660
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||||| |||| || ||||||||||  |||||||| | |||| |||| |||||||||    
T  10656588 tttttcacatttcttaagaaaaattgttaatgcaattaatgtg--tattttatgtgttaaaattaccaaattatc 10656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 21574988 - 21574917
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||  |  |||||||| |||||||||||||||| | | ||||||||| ||||||    
T  21574988 tttttcacatttcttaagaaatgtttttagtgtacttaatgtgtctattttgtatgttaatattaccaaatt 21574917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 24781367 - 24781305
Alignment:
Q  22 atttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||| ||||||||||| |||||||||||||| |||||| | | ||||||||||||||||    
T  24781367 atttcttaa-aaaaatagttaatgtaattaatgtgtttattttgtatgttaatattatcaaatt 24781305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 4745111 - 4745201
Alignment:
Q  3 caccttttacatttttcacatttctt-aagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||| ||| |||||||||||||| || ||||||| ||||||||| ||||||||||| |||||| |   ||||||||| |||||| ||||||    
T  4745111 caccctttgcatttttcacatttttttaagaaaagtagttagtgcaattaatgtgtttattttgtgggttaatattaccaaattgtcattt 4745201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 27587828 - 27587898
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||| |||||||||||||||||||||| | || ||| |||||||||||||| |||| | | |||||||||    
T  27587828 tttacttttttcacatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatatta 27587898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 36177288 - 36177366
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| |||||||||||||||| |  | ||||||||||||||||||||||| | | |||||||||  ||||| ||||||    
T  36177288 ttttttacatttcttaagaaaagttatcagtgtaattaatgtgtctattttgtgtgttaatattacaaaattgtcattt 36177366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 4857606 - 4857524
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaat----taatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||| |||| | |||||||||||    ||||||||||||||||| | |||||||||  ||||| ||||||    
T  4857606 tttttcacatttcttaataaaagttgttagtgtaattaattaatgtgtctattttatgtgttaatattactaaattgtcattt 4857524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 15967220 - 15967139
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||||||||||||  | ||  ||||||||||||||||| |||| | | ||||||||| ||||||| | ||||||    
T  15967220 tttttcacatttcttaagaaaggttgtcggtgtaattaatgtgtctgttttgtgtattaatattaccaaattaccctttatt 15967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 36347715 - 36347638
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||| ||||||| ||||||||| |||| | || |||||||||||||| ||| |||| | | ||||||||||||||||    
T  36347715 tttacttttttcagatttcttaataaaagttgtcagtgtaattaatgtatctgttttgtgtattaatattatcaaatt 36347638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 11980712 - 11980776
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||| |||| |||| |||| | |||||||||||||||||||||||||| | | |||||||||    
T  11980712 tttttcatattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatatta 11980776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 29866185 - 29866249
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | ||||||| ||||||| ||||| |||| | | |||||||||    
T  29866185 tttttcacatttcttaagaaaagttgttagtgcaattaatatgtcttttttgtgtgttaatatta 29866249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 20976404 - 20976353
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtct 59  Q
    ||||| ||||||| |||||||||||||| | || ||||||||||||||||||    
T  20976404 tttacttttttcatatttcttaagaaaatttgtcagtgtaattaatgtgtct 20976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 30348185 - 30348114
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||| ||||||| | |||| | || |||||||||||||||| | | ||||||||| ||||||    
T  30348185 tttttcacatttctgaagaaaagttgttaatttacttaatgtgtctattttgtgtgttaatattaccaaatt 30348114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 33862924 - 33862873
Alignment:
Q  14 tttttcacatttctt-aagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||| ||||    
T  33862924 tttttcacatttctttaagaaaaattgtcagtgtaattaatgtgtctgtttt 33862873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42644599 - 42644508
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||| ||||||||||||||   || ||||   ||||||||||||||||||  |||||| | |  ||||||||||||||| ||||||    
T  42644599 aacaccttttgcatttttcacattttaaaaaaaaagctgttagtgtaattaatgtgattattttgtatgctaatattatcaaattgtcattt 42644508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 25017782 - 25017704
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||| ||||||||||||  | || ||| |||||||||||||| |||| | | ||||||||| |||||| ||||||    
T  25017782 tttttcacgtttcttaagaaatgttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaattgtcattt 25017704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 4378129 - 4378178
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatg 54  Q
    |||||| | ||||||||||||||||| |||| | ||||||||||||||||    
T  4378129 ccttttgcttttttcacatttcttaaaaaaagttgttagtgtaattaatg 4378178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 4738626 - 4738667
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgt 55  Q
    ||||||||||||||||||||| || || ||||||||||||||    
T  4738626 tttttcacatttcttaagaaatattgtcagtgtaattaatgt 4738667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 7510601 - 7510666
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||| ||||||||| |  |||||||||||||||||| | |||| | | |||||||||    
T  7510601 atttttcacattttttaagaaaagttattagtgtaattaatgtgtatgttttgtgtgttaatatta 7510666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 10934002 - 10934075
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    |||||||||||| || |||||  | || |||||||||||||||||| |||| | | ||||||||| ||||||||    
T  10934002 tttttcacattttttcagaaatgttgtcagtgtaattaatgtgtctgttttgtatgttaatattaccaaattat 10934075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 3247382 - 3247318
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | |  |||||||||||| ||||| |||| | | |||||||||    
T  3247382 tttttcacatttcttaagaaaagttgacagtgtaattaatatgtctgttttgtatgttaatatta 3247318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 36750891 - 36750839
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgt 57  Q
    |||||||||||||||||| ||||||| |||| | ||||| |||| ||||||||    
T  36750891 ccttttacatttttcacaattcttaataaaagttgttagcgtaagtaatgtgt 36750839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 43453972 - 43454052
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||| |||||| | ||||||||| |||| | |||||| |||||||||||||  |||| | | |||||||||||||| ||||    
T  43453972 tttatattttttatatttcttaaaaaaagttgttagtataattaatgtgtcagttttgtatgttaatattatcaaactatc 43454052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 214605 - 214692
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||| | | ||||||||| |||||| ||||||    
T  214605 ccttttacttttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcattt 214692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 31536008 - 31536082
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||| |||||||||||||||| | ||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  31536008 ttttttacatttcttaagaaaagttgttagtgtaattaatatatctattttatttgttaatattatcaaattatc 31536082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 22410959 - 22410872
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||| | | ||||||||| |||||| || ||||||    
T  22410959 tttacttttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttttatgttaatattaccaaattgtcttttatt 22410872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 31946022 - 31945951
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| | | ||||||||| ||||||    
T  31946022 tttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 31945951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 12514702 - 12514624
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||||||||||| | ||||||||||| ||||||| |||||||||||||||||| | | ||||||||| ||||||    
T  12514702 ttttacatttttcacatattttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaatt 12514624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 19838927 - 19838991
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||||    
T  19838927 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatta 19838991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 3729385 - 3729456
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||| | | ||||||||| ||||||    
T  3729385 ttttttacatttcttaagaaaaattgttggtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 3729456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 15981789 - 15981867
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatt 91  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||| |||| | | ||||||||| |||||| |||||    
T  15981789 atttttcacatttcttaagaaaagttgttggtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcatt 15981867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 28238422 - 28238350
Alignment:
Q  16 tttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||| | | ||||||||| || ||||||    
T  28238422 tttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattaccatattatc 28238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 9428163 - 9428241
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||| ||||||||||||| | | || | |||||||||| |||||||| | | |||||||||||||||||||||||    
T  9428163 tttttcacgtttcttaagaaaagttgctactataattaatgtatctattttgtgtgttaatattatcaaattatcattt 9428241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 5895727 - 5895808
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    |||||||||||||||||||||| | |||| |||||||||||||||| |||| | | |||||||||  ||||| || ||||||    
T  5895727 tttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttatt 5895808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 4250768 - 4250704
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||| |||||||||||||||||| || |||||||||||||||||| |||| | | |||||||||    
T  4250768 ttttttacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 4250704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 11302851 - 11302915
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | |||||| |||||||||||||| |||| | | |||||||||    
T  11302851 tttttcacatttcttaagaaaagttgttagtataattaatgtgtctgttttttgtgttaatatta 11302915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 3888063 - 3887988
Alignment:
Q  3 caccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||| || ||||||||||||||||||||| | |||| || | |||||||||||||||| | | |||||||||    
T  3888063 caccttttgcaattttcacatttcttaagaaaagttgttattgcagttaatgtgtctattttgtgtgttaatatta 3887988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 16327118 - 16327197
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||||||||| | || | | |||||||||||||| |||| | | ||||||||| |||||| ||||||    
T  16327118 atttttcacatttcttaagaaaagttgtcaatataattaatgtgtctgttttgtgtgttaatattaccaaattgtcattt 16327197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 11081892 - 11081966
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||| ||||||||||| | ||||||||||||||| | |||||||| | | ||||| ||| |||||||||    
T  11081892 tttttcacatatcttaagaaaagttgttagtgtaattaatatatctattttctgtattaatgttaccaaattatc 11081966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 1763809 - 1763873
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||| |||||||||||||| | || |||||||||||||||||| |||| | | |||||||||    
T  1763809 tttttcatatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 1763873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 10669384 - 10669313
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||| |||||| || | |||||| ||||||| |||||||||||||||||| | | ||||||||| ||||||    
T  10669384 ttttttacatttttttaaaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaatt 10669313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 16350516 - 16350595
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||| |||| |||| | || ||||||||||||| |||| |||| | | ||||||||| |||||| ||||||    
T  16350516 atttttcacattttttaataaaagttgtcagtgtaattaatgagtctgttttgtgtgttaatattaccaaattgtcattt 16350595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 5084650 - 5084612
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaat 53  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  5084650 ttttcacatttcttaagaaaagttgttagtgtaattaat 5084612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 8644914 - 8644841
Alignment:
Q  6 cttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattat 79  Q
    ||||||||||||||||||||||||| |||| | |||||   ||||||| | |||||||| | | ||||||||||    
T  8644914 cttttacatttttcacatttcttaaaaaaagttgttagcacaattaatatatctattttgtatgttaatattat 8644841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 10260700 - 10260624
Alignment:
Q  12 catttttcacatttctt-aagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    ||||||| ||||||||| || |||||| |||| ||||||||| || |||||||||| | |||||||||  |||||||    
T  10260700 cattttttacatttcttaaaaaaaaattgttaatgtaattaacgtatctattttatgtattaatattactaaattat 10260624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 33607369 - 33607425
Alignment:
Q  32 aaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||| |||| || |||||||||||||||||  | | |||||||||||||||||||    
T  33607369 aaaaattgttaatgcaattaatgtgtctatttagtgtgttaatattatcaaattatc 33607425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 20361979 - 20362043
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||| | |||||||||    
T  20361979 tttttcacatttcttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatatta 20362043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 21012839 - 21012923
Alignment:
Q  4 accttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||| ||||||||| |||||||||||||| | ||||||| ||||||||||| |||||| | | |||||||||||||||||||    
T  21012839 accttttgcatttttcaaatttcttaagaaaagttgttagtgcaattaatgtgtttattttgtgtgttaatattatcaaattatc 21012923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 8384081 - 8384003
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||| | | ||||||||| |||||| ||||||    
T  8384081 tttttcatatttcttaagaaaaatagttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcattt 8384003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 2131743 - 2131827
Alignment:
Q  4 accttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||||||||||| |||||||||||||||| | ||||||| ||||||  |||||||||| | | ||||||||| |||||||||    
T  2131743 accttttacattttttacatttcttaagaaaagttgttagtgcaattaacatgtctattttgtgtgttaatattaccaaattatc 2131827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 17663620 - 17663684
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||||    
T  17663620 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgcctattttatgtgttaatatta 17663684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 44421439 - 44421523
Alignment:
Q  8 tttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||| ||| |||| ||| |||||||||  ||||| ||||||    
T  44421439 tttacttttttcacatttcttaagaaaaattgtcagtgtaattaatgtatctgttttgtttgttaatattactaaattgtcattt 44421523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 27297573 - 27297647
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||| | | |||||||||  ||||||||    
T  27297573 tttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattatc 27297647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 44424589 - 44424655
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||| | | |||||||||    
T  44424589 catttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttgtatgttaatatta 44424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13477155 - 13477078
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||| |||| |||||||||||||| ||||||||||| ||||||| ||||||| ||| |||||||| | |||||||||    
T  13477155 aacacattttgcatttttcacattttttaagaaaaattgttagtgcaattaatatgtttattttatgtgttaatatta 13477078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 26512058 - 26512131
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||| | ||||||||||||||||| |||||| |||||| |||||||||||| |||||||| | |||||||||    
T  26512058 ccttttgcttttttcacatttcttaaaaaaaattgttagtataattaatgtgtttattttatgtgttaatatta 26512131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 45214719 - 45214792
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||||| | || |||||||||||||||||| |||| | | |||||||| |||||||    
T  45214719 catttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattttcaaatt 45214792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 247656 - 247727
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||| ||||| ||| | |||||||||||||||||||||||||| | | |||||||||| |||||    
T  247656 tttttcacattttttaaggaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattataaaatt 247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 9718283 - 9718208
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattat 87  Q
    |||||||||||||||||||||||  | || |||||||||||||||||| |||| | | ||||||||| ||||||||    
T  9718283 catttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattat 9718208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 15851527 - 15851598
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||| | || |||||||||||||||||| |||| | | |||||||||| |||||    
T  15851527 tttttcacatttcttaagaaaagttgtgagtgtaattaatgtgtctgttttttgtgttaatattatgaaatt 15851598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 41865703 - 41865786
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||| | |||||||||||||||||||||| | ||| || ||||||||||||||||||| | | |||| |||| |||||||||    
T  41865703 ccttttgcttttttcacatttcttaagaaaagttgttggtctaattaatgtgtctattttgtgtgttaacattaccaaattatc 41865786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 2395798 - 2395848
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||    
T  2395798 ttttttacatttcttaagaaaagttgttagtgtaattaatgtgtctatttt 2395848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 4398632 - 4398555
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||| | |||||||||||||||||||||||||| | | |||||||||  ||||| ||||||    
T  4398632 tttttcacattt-ttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattacgaaattgtcattt 4398555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 32677471 - 32677549
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||| ||||||||||||||||||| |||| |  ||||||||||||||||||||   |||||||| ||||||| ||||||    
T  32677471 ttttccacatttcttaagaaaaattgttaatacaattaatgtgtctattttatgggttaatattttcaaattgtcattt 32677549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 35241817 - 35241739
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| ||||||| |||||||  | ||  ||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  35241817 ttttttacatttcataagaaatgttgtctgtgtaattaatgtgtctgttttgtttgttaatattatcaaattatcattt 35241739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 37355032 - 37355110
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||| |||| | | |||||||||  ||||| ||||||    
T  37355032 tttttcacatttcttaagaaaagttgtttgtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcattt 37355110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 38449823 - 38449745
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||||||| |||| |  ||  |||||||||||||||| |||| | | |||||||||||||||||||||||    
T  38449823 tttttcacatttcttaataaaagttatttttgtaattaatgtgtctgttttgtgtattaatattatcaaattatcattt 38449745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 27749495 - 27749572
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||| ||||| |||||||||||||||||||||| | || |||||||||||| ||||| |||| | | |||||||||    
T  27749495 aacaccctttacttttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtattaatatta 27749572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 3645319 - 3645383
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||||||||||||||| | |||||| || |||||||||||||||| | | |||||||||    
T  3645319 tttttcacatttcttaagaaaagttgttagtttacttaatgtgtctattttgtgtattaatatta 3645383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 43709903 - 43709979
Alignment:
Q  3 caccttttacatttttcacatttcttaag-aaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||| ||| |||||||||||||||||||| |||||| ||||||| |||||||| ||||||||| | | |||||||||    
T  43709903 caccctttgcatttttcacatttcttaagcaaaaattgttagtgcaattaatgcgtctattttgtgtgttaatatta 43709979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 24774861 - 24774932
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||| ||||||||| |  |||||||||||||||| |||||||| | | ||||||||| ||||||    
T  24774861 tttttcacattttttaagaaaatttattagtgtaattaatgtatctattttgtgtgttaatattaccaaatt 24774932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 28733821 - 28733897
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||||| ||  ||||||||||||||||| |||||  | ||||||||| |||||| ||||||    
T  28733821 tttttcacattttttaagaaaaattgtcggtgtaattaatgtgtctgtttta--tgttaatattaccaaattgtcattt 28733897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 41665706 - 41665777
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    |||||||||||||||||||||  | || |||||||||||||||||| |||| | | |||||| |||||||||    
T  41665706 tttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatagtatcaaatt 41665777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 44274777 - 44274698
Alignment:
Q  13 atttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||||||||||| ||||||||| | || | |||||||||||||||| |||||| | ||||||||  |||||| ||||||    
T  44274777 atttttcacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttatgtgttaatattgccaaattgtcattt 44274698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 2917206 - 2917156
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    |||| ||||||||||||||||| | |||||| |||||||||||||||||||    
T  2917206 ttttccacatttcttaagaaaagttgttagtataattaatgtgtctatttt 2917156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 6275684 - 6275626
Alignment:
Q  7 ttttacatttttcacatttcttaagaaaaa-tagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||||||| |||||||||| ||||| | ||||||| ||||||||||||||||||    
T  6275684 ttttacatttttcccatttcttaaaaaaaaattgttagtgcaattaatgtgtctatttt 6275626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 14527620 - 14527697
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||  |||| |||||| ||||| |||||||||||||||||||| | | ||||||||| | |||||||||||    
T  14527620 tttttcacattatttaa-aaaaattgttagggtaattaatgtgtctattttgtgtgttaatattaccgaattatcattt 14527697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 17251070 - 17250992
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||| ||||||||| | |||||| |||||||||||||| |||| | | |||||||||  ||||| ||||||    
T  17251070 tttttcacattttttaagaaaagttgttagtataattaatgtgtctgttttgtgtgttaatattacaaaattgtcattt 17250992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 28265060 - 28264982
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | || |||||||||||||||| | |||| |   ||||||||| |||||| ||||||    
T  28265060 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgcgttaatattaccaaattgtcattt 28264982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 42250985 - 42250935
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    |||||||||||||||| ||||| | | ||||||||||||||||||||||||    
T  42250985 tttttcacatttcttatgaaaagttggtagtgtaattaatgtgtctatttt 42250935  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 8065180 - 8065107
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    |||||||||||| |||||||  | || |||||||||||||||||| |||| | | ||||||||| |||||||||    
T  8065180 ttttcacatttcctaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattatc 8065107  T

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Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 43650021 - 43650094
Alignment:
Q  5 ccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||| | ||||| ||||||||| |||||||| || |||||||||||||||||| |||| | | |||||||||    
T  43650021 ccttttgctttttttacatttctttagaaaaattgtcagtgtaattaatgtgtctgttttgtatgttaatatta 43650094  T

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Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 2048936 - 2048885
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttat 66  Q
    ||||||||||||||||||||| | ||| |||||| |||||| ||||||||||    
T  2048936 ttttcacatttcttaagaaaagttgttggtgtaaataatgtctctattttat 2048885  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 8667632 - 8667706
Alignment:
Q  12 catttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttc-ttaatattatcaaatt 85  Q
    ||||||||||||||| |||||||| | || ||| |||||||| ||||| |||| | || ||||||||||||||||    
T  8667632 catttttcacatttcctaagaaaagttgtcagtctaattaatatgtctgttttgtatctttaatattatcaaatt 8667706  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 14420682 - 14420744
Alignment:
Q  23 tttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||| ||||||| | ||||||||||||||||||||| |||| | | ||||||||| ||||||    
T  14420682 tttctaaagaaaagttgttagtgtaattaatgtgtctgttttgtgtgttaatattaccaaatt 14420744  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 34042164 - 34042055
Alignment:
Q  15 ttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcatttattaaagtcaaatggatgctta 114  Q
    ||||||||||| || | |||||| ||||||  |||||||||||||||||| | | ||||||||| ||||         | ||||||||||||| ||||||    
T  34042164 ttttcacatttttttaaaaaaattgttagttcaattaatgtgtctattttgtatgttaatattaccaaa---------aataaagtcaaatgggtgctta 34042074  T
Q  115 gatacaaggacggagggag 133  Q
    |||| | ||||||||||||    
T  34042073 gatatagggacggagggag 34042055  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 35453816 - 35453778
Alignment:
Q  40 ttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  35453816 ttagtgtaattaatgtgtctattttatatgttaatatta 35453778  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 375425 - 375376
Alignment:
Q  43 gtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    |||||||||||||||||||||| | | ||| |||||||||||| ||||||    
T  375425 gtgtaattaatgtgtctattttgtgtgttagtattatcaaattgtcattt 375376  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 920765 - 920696
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaa 83  Q
    |||||||||||||||||  ||  ||||||||||| ||||| ||| |||||| | | ||||||||||||||    
T  920765 tttttcacatttcttaaataatgtagttagtgtagttaatatgtttattttgtatgttaatattatcaaa 920696  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 20426950 - 20426987
Alignment:
Q  27 ttaagaaaaatagttagtgtaattaatgtgtctatttt 64  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  20426950 ttaagaaaaattgttagtgaaattaatgtgtctatttt 20426987  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 36174901 - 36174852
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattt 63  Q
    |||||||| ||||||||||||||| ||||||| || |||| |||||||||    
T  36174901 tttttcacgtttcttaagaaaaattgttagtgcaaataatatgtctattt 36174852  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 11071676 - 11071728
Alignment:
Q  26 cttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    |||||||||| | ||||||| |||||||||||||| ||||| | |||||||||    
T  11071676 cttaagaaaagttgttagtgcaattaatgtgtctaatttatgtgttaatatta 11071728  T

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Target: scaffold1091 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 2022 - 1948
Alignment:
Q  14 tttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||| | | ||||||||| |||||||||    
T  2022 tttttcacatttcttaagataagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatc 1948  T

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Target: scaffold0013 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49119 - 49210
Alignment:
Q  1 aacaccttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatcattt 92  Q
    ||||| |||| ||||||| |||||||||||||||||| |||| |||||||||| |||||| ||| | | |||||||||| ||||| ||||||    
T  49119 aacactttttgcattttttacatttcttaagaaaaattgttaatgtaattaatatgtctactttgtgtgttaatattattaaattgtcattt 49210  T

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Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 38584 - 38512
Alignment:
Q  16 tttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaattatc 88  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||| | | ||||||||| || ||||||    
T  38584 tttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattaccatattatc 38512  T

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Target: scaffold0067 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 35874 - 35922
Alignment:
Q  47 aattaatgtgtctattttatttcttaatattatcaaattatcatttatt 95  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  35874 aattaatatgtcaattttatatcttaatattatcaaattatcatttatt 35922  T

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Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 23750 - 23688
Alignment:
Q  22 atttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatattatcaaatt 85  Q
    ||||||||| ||||||||||| |||||||||||||| |||||| | | ||||||||||||||||    
T  23750 atttcttaa-aaaaatagttaatgtaattaatgtgtttattttgtatgttaatattatcaaatt 23688  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 99934 - 99862
Alignment:
Q  6 cttttacatttttcacatttcttaagaaaaatagttagtgtaattaatgtgtctattttatttcttaatatta 78  Q
    ||||| ||||||||| |||| ||||||||| | ||||||| || | ||||||||||||| | | |||||||||    
T  99934 cttttgcatttttcatatttgttaagaaaagttgttagtgcaacttatgtgtctattttgtgtgttaatatta 99862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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