View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17211_high_24 (Length: 248)
Name: NF17211_high_24
Description: NF17211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17211_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 39645597 - 39645836
Alignment:
| Q |
1 |
ttaaacacaggtggcagtcacaatcttgaccttaatttgggcatggcgactccaggacatgaacccaaagaaaacaaaggatattgtcaatttcagaccg |
100 |
Q |
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| T |
39645597 |
ttaaacacaggtggcagtcacaatcttgaccttaatttgggcatggcgactccaggacatgaacccaaagaaaacaaaggatattgtcaatttcagaccg |
39645696 |
T |
|
| Q |
101 |
tcccttcttacaacatgcatcctggaaggaatttaaaggtatataattgaattttactacttccaaatttaatatattcgtaaaatgtacatgtattagt |
200 |
Q |
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| T |
39645697 |
tcccttcttacaacatgcatcctggaaggaatttaaaggtatataattgaattttactacttccaaatttaatatattcgtaaaatgtacatgtattagt |
39645796 |
T |
|
| Q |
201 |
ctaaatttaagtccagagtaatacaacataatttcctatg |
240 |
Q |
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||||||||||||||||||||||||| |||||||||||||| |
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| T |
39645797 |
ctaaatttaagtccagagtaatacatcataatttcctatg |
39645836 |
T |
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