View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17212_low_2 (Length: 247)
Name: NF17212_low_2
Description: NF17212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17212_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 36075577 - 36075350
Alignment:
| Q |
1 |
tttaactttctttggcagtataatatccattccatgctccatatcatggtatcatcaatatcaacatctagaacaaaacttctaattttatctataatgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36075577 |
tttaactttctttggcagtataatatccattccatgctccatatcatggtatcatcaaaatcaacatctagaacaacacttctaattttatctataatgt |
36075478 |
T |
|
| Q |
101 |
ttgtttctagctcactatataatttgtcatagttctaacgaccaattttagaaatatcataaaacttcaacatacactcattggggtggacataaggaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36075477 |
ttgtttctagctcactatataatttgtcatagttctaacgaccaattttagaaatatcataaaacttcaacatacactcattggggtggacataaggaac |
36075378 |
T |
|
| Q |
201 |
cacgtaatccaaatattgagttgaccaa |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
36075377 |
cacgtaatccaaatattgagttgaccaa |
36075350 |
T |
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