View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17213_low_2 (Length: 398)

Name: NF17213_low_2
Description: NF17213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17213_low_2
NF17213_low_2
[»] chr3 (5 HSPs)
chr3 (19-387)||(50101853-50102221)
chr3 (72-137)||(46431754-46431819)
chr3 (72-136)||(41452816-41452880)
chr3 (72-137)||(43308704-43308769)
chr3 (73-121)||(33307257-33307305)
[»] chr4 (6 HSPs)
chr4 (58-174)||(40018227-40018344)
chr4 (65-151)||(934492-934578)
chr4 (74-147)||(21879218-21879292)
chr4 (86-151)||(25755472-25755537)
chr4 (66-174)||(47372786-47372895)
chr4 (72-151)||(47147515-47147592)
[»] chr1 (6 HSPs)
chr1 (86-151)||(15577574-15577639)
chr1 (72-136)||(12231507-12231571)
chr1 (69-133)||(3818935-3818999)
chr1 (72-174)||(42501250-42501352)
chr1 (185-218)||(26299324-26299357)
chr1 (72-132)||(8342961-8343021)
[»] chr5 (2 HSPs)
chr5 (86-136)||(28186851-28186901)
chr5 (72-136)||(9917526-9917590)
[»] chr2 (5 HSPs)
chr2 (72-133)||(26784419-26784480)
chr2 (61-135)||(31254418-31254493)
chr2 (77-171)||(1626342-1626436)
chr2 (86-174)||(8197579-8197667)
chr2 (86-174)||(8202339-8202427)
[»] chr7 (3 HSPs)
chr7 (72-124)||(45601618-45601670)
chr7 (72-143)||(29653615-29653686)
chr7 (93-137)||(41578198-41578242)
[»] chr6 (1 HSPs)
chr6 (72-215)||(34501-34645)
[»] scaffold0018 (1 HSPs)
scaffold0018 (72-123)||(178509-178560)
[»] chr8 (5 HSPs)
chr8 (72-137)||(38178335-38178400)
chr8 (93-137)||(10079982-10080026)
chr8 (72-136)||(24739924-24739988)
chr8 (72-124)||(30198354-30198406)
chr8 (72-132)||(39967579-39967639)


Alignment Details
Target: chr3 (Bit Score: 353; Significance: 0; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 19 - 387
Target Start/End: Original strand, 50101853 - 50102221
Alignment:
Q  19 gagagtgggttggatggagggtagaaaaatcaaccaaaagcaaagaaagacttgaaaaactataactgaaaccattaagaaagatatggagagtaatgag 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50101853 gagagtgggttggatggagggtagaaaaatcaaccaaaagcaaagaaagacttgaaaaactataactgaaaccattaagaaagatatggagagtaatgag 50101952  T
Q  119 ttggatagagatatgatatctcatagatcattacaaagtcgtttgattcatgtagctaattccaccagtgggattagacttggttgctgttgttgttgta 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  50101953 ttggatagagatatgatatctcatagatcattacaaagtcgtttgattcatgtagctaaacccaccagtgggattagacttggttgctgttgttgttgta 50102052  T
Q  219 acaattaaatacattgtcgattcagatttcgatgagcttgatatgattaaagactatcaaaaatatatgttttatgattgctctgtctgtagtaaatggc 318  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50102053 acaattaaatacattgtcgattcagatttagatgagcttgatatgattaaagaccatcaaaaatatatgttttatgattgctctgtctgtagtaaatggc 50102152  T
Q  319 ctgggaaaaagcactggagggtaaccattactatgttgatctaattgtttcttgggttatgtttttcat 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50102153 ctgggaaaaagcactggagggtaaccattactatgttgatctaattgtttcttgggttatgtttttcat 50102221  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 46431819 - 46431754
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatat 137  Q
    ||||||||||||  ||||| ||||| |||||| | |||| ||||||||||||||||||||| ||||    
T  46431819 gaaaaactataagagaaactattaaaaaagatctagagattaatgagttggatagagatattatat 46431754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 41452880 - 41452816
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgata 136  Q
    |||||||||||| | |||| |||||||||||| | |||| |||||||||||||| | ||||||||    
T  41452880 gaaaaactataagttaaactattaagaaagatctagagattaatgagttggataaatatatgata 41452816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 43308704 - 43308769
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatat 137  Q
    ||||||||| ||  ||||| ||||||||| || | |||| |||| |||||||||||||||||||||    
T  43308704 gaaaaactacaagagaaactattaagaaaaatctagagattaatcagttggatagagatatgatat 43308769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 33307257 - 33307305
Alignment:
Q  73 aaaaactataactgaaaccattaagaaagatatggagagtaatgagttg 121  Q
    |||||||||||  |||||||||||||||||| | |||| ||||||||||    
T  33307257 aaaaactataagggaaaccattaagaaagatctagagattaatgagttg 33307305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 40018344 - 40018227
Alignment:
Q  58 gcaaagaaagactt-gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcattacaaag 156  Q
    ||||| |||||||| ||||||||||||   ||||  ||||||||||| | ||||  |||||||||||||| |||||||||| | ||||| ||||||   |    
T  40018344 gcaaataaagacttagaaaaactataagaaaaactgttaagaaagatctagagatcaatgagttggatagggatatgatatatgatagaacattacggcg 40018245  T
Q  157 tcgtttgattcatgtagc 174  Q
    ||||||||| ||||||||    
T  40018244 tcgtttgatccatgtagc 40018227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 934578 - 934492
Alignment:
Q  65 aagacttgaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcatta 151  Q
    |||||| |||||||||| |  ||||| |||||||||| | | |||| ||||||||||||||| | |||||||| | ||||| |||||    
T  934578 aagactagaaaaactattagagaaactattaagaaagttctagagattaatgagttggatagggttatgatatatgatagaacatta 934492  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 21879292 - 21879218
Alignment:
Q  74 aaaactataactgaaaccatt-aagaaagatatggagagtaatgagttggatagagatatgatatctcatagatc 147  Q
    ||||||||||  ||||| ||| ||||||||| | ||||  ||||||||||||||||||||||||| | |||||||    
T  21879292 aaaactataagagaaactattcaagaaagatctagagatgaatgagttggatagagatatgatatatgatagatc 21879218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 25755472 - 25755537
Alignment:
Q  86 gaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcatta 151  Q
    ||||| |||||| ||||  ||| || ||||||||||||||| |||||||||| ||||||| |||||    
T  25755472 gaaactattaagtaagacttggggattaatgagttggatagggatatgatatatcatagaacatta 25755537  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 47372786 - 47372895
Alignment:
Q  66 agacttga-aaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcattacaaagtcgtttga 164  Q
    |||||||| ||||||||||  ||||| | ||| ||||||   |||| |||||||||||||||| ||||| ||| | ||||| |||||   ||||||||||    
T  47372786 agacttgagaaaactataagagaaactactaataaagatccagagattaatgagttggatagaaatatggtatattatagaacattatggagtcgtttga 47372885  T
Q  165 ttcatgtagc 174  Q
    | ||||||||    
T  47372886 tccatgtagc 47372895  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 47147515 - 47147592
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcatta 151  Q
    |||||||||||   ||||| |||||||||||| | |||| |||||||||||||  ||||||||||| | ||||| |||||    
T  47147515 gaaaaactatagaagaaactattaagaaagatctagagattaatgagttggat--agatatgatatatgatagaacatta 47147592  T

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Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 15577574 - 15577639
Alignment:
Q  86 gaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcatta 151  Q
    ||||| |||||||| ||||| |||| |||||||||||||||||||||||||| | ||||| |||||    
T  15577574 gaaactattaagaaggatatagagattaatgagttggatagagatatgatatttgatagaacatta 15577639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 12231507 - 12231571
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgata 136  Q
    ||||||||||||  || || |||||||||||| | |||| |||||||||||||||||||||||||    
T  12231507 gaaaaactataagagagactattaagaaagatctcgagattaatgagttggatagagatatgata 12231571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 3818999 - 3818935
Alignment:
Q  69 cttgaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatg 133  Q
    |||||||||||||||  ||||| |||||||||||| | |||| |||||||||| ||||| |||||    
T  3818999 cttgaaaaactataagagaaactattaagaaagatttagagattaatgagttgaatagaaatatg 3818935  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 42501250 - 42501352
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcattacaaagtcgtttgattcatgt 171  Q
    ||||||||||||  ||||  |||||||||||| |  ||| |||||||||||||||| |||||  || | ||||| |||||||  ||||||| || |||||    
T  42501250 gaaaaactataagagaaattattaagaaagatctatagattaatgagttggatagaaatatggaatatgatagaacattacagcgtcgtttaatccatgt 42501349  T
Q  172 agc 174  Q
    |||    
T  42501350 agc 42501352  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 26299324 - 26299357
Alignment:
Q  185 agtgggattagacttggttgctgttgttgttgta 218  Q
    |||||||| |||||||||||||||||||||||||    
T  26299324 agtgggataagacttggttgctgttgttgttgta 26299357  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 8343021 - 8342961
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatat 132  Q
    ||||||||||||  ||||| ||||| |||||| | |||| |||||||||||||||| ||||    
T  8343021 gaaaaactataagagaaacaattaataaagatctagagattaatgagttggatagaaatat 8342961  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 28186901 - 28186851
Alignment:
Q  86 gaaaccattaagaaagatatggagagtaatgagttggatagagatatgata 136  Q
    ||||| |||||||||||| | |||| |||||||||||||||||||||||||    
T  28186901 gaaactattaagaaagatttagagattaatgagttggatagagatatgata 28186851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 9917590 - 9917526
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgata 136  Q
    |||||||||| |  ||||| ||| |||||||||| ||||  ||||||||||||||||||||||||    
T  9917590 gaaaaactattagagaaactatttagaaagatatagagatcaatgagttggatagagatatgata 9917526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 26784480 - 26784419
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatg 133  Q
    ||||||||||||  ||||| |||||||||||||| |||| |||||||||| ||||| |||||    
T  26784480 gaaaaactataagagaaactattaagaaagatatagagattaatgagttgaatagaaatatg 26784419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 31254418 - 31254493
Alignment:
Q  61 aagaaagact-tgaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgat 135  Q
    |||||||||| ||||||||| ||| | |||| |||||||||||| | |||| |||||||||| ||||| |||||||    
T  31254418 aagaaagactgtgaaaaactgtaagttaaactattaagaaagatctagagattaatgagttgaatagaaatatgat 31254493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 171
Target Start/End: Original strand, 1626342 - 1626436
Alignment:
Q  77 actataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcattacaaagtcgtttgattcatgt 171  Q
    |||||||  ||||| |||||||||||| | |||| |||||||||| ||| | ||||||||| | ||||| |||| ||| || ||||||| |||||    
T  1626342 actataagagaaactattaagaaagatctagagattaatgagttgtataaaaatatgatatataatagaacattgcaacgttgtttgatccatgt 1626436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 8197667 - 8197579
Alignment:
Q  86 gaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcattacaaagtcgtttgattcatgtagc 174  Q
    ||||| |||||||||||| |  ||| |||||||||||||||| ||||||||| | |||||  ||||    |||||||||| ||||||||    
T  8197667 gaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagc 8197579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 8202427 - 8202339
Alignment:
Q  86 gaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcattacaaagtcgtttgattcatgtagc 174  Q
    ||||| |||||||||||| |  ||| |||||||||||||||| ||||||||| | |||||  ||||    |||||||||| ||||||||    
T  8202427 gaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagc 8202339  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 45601618 - 45601670
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggat 124  Q
    ||||||||||||  |||||||||||||||||| | |||| |||||||||||||    
T  45601618 gaaaaactataagagaaaccattaagaaagatctagagattaatgagttggat 45601670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 29653686 - 29653615
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcata 143  Q
    |||||||| |||  ||||| |||||||||||| | |||| ||||||||| |||||| ||||||||| |||||    
T  29653686 gaaaaactgtaagagaaactattaagaaagatctagagattaatgagttagatagaaatatgatatatcata 29653615  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 41578242 - 41578198
Alignment:
Q  93 ttaagaaagatatggagagtaatgagttggatagagatatgatat 137  Q
    |||||||| |||| |||| || |||||||||||||||||||||||    
T  41578242 ttaagaaacatatagagattagtgagttggatagagatatgatat 41578198  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 34645 - 34501
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatatctcatagatcattacaaagtcgtttgattcatgt 171  Q
    ||||||||||||  |||||||||||||||||| |  ||| ||||||||||||| || ||||| | | | ||||| |||||    ||  |||||| |||||    
T  34645 gaaaaactataagagaaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatccatgt 34546  T
Q  172 agctaattccac-cagtgggattagacttggttgctgttgttgtt 215  Q
    |||| |  ||||  |||||||| ||||||||||| ||||||||||    
T  34545 agctgaccccacttagtgggataagacttggttgttgttgttgtt 34501  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 178560 - 178509
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttgga 123  Q
    ||||||||||||  ||||| |||||||||||||| |||| ||||||||||||    
T  178560 gaaaaactataagagaaactattaagaaagatatagagattaatgagttgga 178509  T

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Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 38178400 - 38178335
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgatat 137  Q
    ||||||||||||  ||||| ||||| |||||  | || | ||||||||||||||||||||||||||    
T  38178400 gaaaaactataagagaaactattaacaaagacctagacattaatgagttggatagagatatgatat 38178335  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 10080026 - 10079982
Alignment:
Q  93 ttaagaaagatatggagagtaatgagttggatagagatatgatat 137  Q
    ||||||||||| | |||| |||||||||||||||| |||||||||    
T  10080026 ttaagaaagatctagagattaatgagttggatagaaatatgatat 10079982  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 24739988 - 24739924
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgata 136  Q
    |||||| |||||  ||||| ||| |||||||| | |||| |||| ||||||||||||||||||||    
T  24739988 gaaaaattataagagaaactattgagaaagatgtagagattaatcagttggatagagatatgata 24739924  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 30198406 - 30198354
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggat 124  Q
    ||||||||||||  ||||  |||||||||||||| |||| |||||||||||||    
T  30198406 gaaaaactataagagaaattattaagaaagatattgagattaatgagttggat 30198354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 39967639 - 39967579
Alignment:
Q  72 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatat 132  Q
    ||||||||||||  ||||| |||||||||||| | | || ||||||||||||| |||||||    
T  39967639 gaaaaactataagagaaactattaagaaagatctagcgattaatgagttggattgagatat 39967579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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