View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17213_low_6 (Length: 250)
Name: NF17213_low_6
Description: NF17213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17213_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 8766582 - 8766796
Alignment:
| Q |
1 |
acccactttagtatagtcttattctattgaagatcctttaattnnnnnnngaatgtggggctctagaaccatgtataccattacttaataatcagttgaa |
100 |
Q |
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| T |
8766582 |
acccactttagtatagtcttattctattgaagatcctttaattaaaagaagaatgtggggctttagaaccatgtataccattacttaataatcagttgaa |
8766681 |
T |
|
| Q |
101 |
ctatataaattaatcatagtacacacgtcatgcattttggattggaatctgcaattggttagaatgtcactttgagatttgaaaaatgtacacataaact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8766682 |
ctatataaattaatcatagtacacacgtcatgcattttggattggaatctgcaattggttagaatgtcactttgagatttgaaaaatgtacacataaact |
8766781 |
T |
|
| Q |
201 |
aattgtcaatgcaac |
215 |
Q |
| |
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||| ||||||||||| |
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| T |
8766782 |
aatagtcaatgcaac |
8766796 |
T |
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