View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17214_low_11 (Length: 238)
Name: NF17214_low_11
Description: NF17214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17214_low_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 44465320 - 44465100
Alignment:
| Q |
18 |
tttacaaggtgaaaatatccaaacattactcagcgcgattctgacaaaccaacaaacttgtttggatggtcttaaagacacttcttcagcttggagtttt |
117 |
Q |
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| T |
44465320 |
tttacaaggtgaaaatatccaaacattactcagcgcgattctgacaaaccaacaaacttgtttggatggtcttaaagacacttcgtcagcttggagtttt |
44465221 |
T |
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| Q |
118 |
cgaaatggactcacaattccactttctaatgacaccaaactctatagtgtctctcttgctttctttaccaaaggttgggttaatcccaaaaccaataaaa |
217 |
Q |
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| T |
44465220 |
cgaaatggactcacaattccactttctaatgacaccaaactctatagtgtctctcttgctttctttaccaaaggttgggttaatcccaaaaccaataaaa |
44465121 |
T |
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| Q |
218 |
cctcgtttcctaattccaaac |
238 |
Q |
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| T |
44465120 |
cctcgtttcctaattccaaac |
44465100 |
T |
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