View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17215_high_38 (Length: 296)

Name: NF17215_high_38
Description: NF17215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17215_high_38
NF17215_high_38
[»] chr2 (41 HSPs)
chr2 (5-284)||(2062870-2063147)
chr2 (97-253)||(16959994-16960150)
chr2 (112-253)||(22885061-22885202)
chr2 (94-253)||(33788542-33788701)
chr2 (116-253)||(15126342-15126479)
chr2 (103-253)||(27739987-27740137)
chr2 (106-253)||(4471935-4472081)
chr2 (107-253)||(25504831-25504978)
chr2 (111-243)||(3745356-3745489)
chr2 (107-243)||(27880054-27880188)
chr2 (119-253)||(10173512-10173647)
chr2 (139-235)||(16952337-16952434)
chr2 (139-235)||(17023002-17023099)
chr2 (139-235)||(17060308-17060405)
chr2 (122-250)||(18681080-18681208)
chr2 (122-253)||(31902352-31902483)
chr2 (135-253)||(14405210-14405330)
chr2 (112-197)||(43816384-43816469)
chr2 (180-253)||(1269495-1269568)
chr2 (164-235)||(17079199-17079271)
chr2 (125-244)||(7695984-7696102)
chr2 (95-253)||(29487143-29487301)
chr2 (125-235)||(34230231-34230341)
chr2 (182-253)||(39338863-39338934)
chr2 (181-253)||(7874303-7874375)
chr2 (122-199)||(12793669-12793745)
chr2 (125-253)||(13337286-13337414)
chr2 (125-250)||(37770583-37770707)
chr2 (139-250)||(915408-915518)
chr2 (180-253)||(14106520-14106593)
chr2 (122-210)||(20572130-20572218)
chr2 (181-253)||(387185-387257)
chr2 (205-253)||(4162041-4162089)
chr2 (181-253)||(5254268-5254340)
chr2 (213-253)||(10524109-10524149)
chr2 (213-253)||(23650397-23650437)
chr2 (194-253)||(36276182-36276240)
chr2 (216-250)||(9560820-9560854)
chr2 (126-184)||(29044778-29044836)
chr2 (247-283)||(14566410-14566446)
chr2 (125-215)||(41086738-41086826)
[»] chr5 (26 HSPs)
chr5 (106-253)||(22675246-22675393)
chr5 (96-253)||(27713081-27713238)
chr5 (111-253)||(39184112-39184256)
chr5 (107-253)||(8730929-8731076)
chr5 (125-253)||(13954175-13954303)
chr5 (107-241)||(24072190-24072323)
chr5 (139-235)||(8297498-8297594)
chr5 (122-243)||(31721699-31721820)
chr5 (125-253)||(14302371-14302499)
chr5 (182-253)||(698373-698444)
chr5 (126-253)||(7391979-7392100)
chr5 (125-250)||(21402778-21402903)
chr5 (125-253)||(7195181-7195308)
chr5 (154-253)||(34378110-34378210)
chr5 (93-253)||(23426356-23426505)
chr5 (180-253)||(25992019-25992092)
chr5 (180-253)||(26045960-26046033)
chr5 (119-250)||(17854001-17854133)
chr5 (186-240)||(39024452-39024506)
chr5 (164-253)||(33258862-33258951)
chr5 (183-241)||(18593267-18593325)
chr5 (205-253)||(29087493-29087541)
chr5 (164-248)||(25658131-25658217)
chr5 (24-85)||(39184012-39184071)
chr5 (14-82)||(17853870-17853937)
chr5 (30-82)||(31742377-31742428)
[»] chr1 (35 HSPs)
chr1 (14-241)||(50589023-50589264)
chr1 (106-253)||(19598648-19598795)
chr1 (94-253)||(42374175-42374335)
chr1 (93-253)||(17033598-17033760)
chr1 (122-253)||(4651792-4651922)
chr1 (111-253)||(38544664-38544807)
chr1 (125-243)||(27102213-27102331)
chr1 (129-254)||(34774882-34775007)
chr1 (125-253)||(6583157-6583285)
chr1 (139-253)||(24658941-24659057)
chr1 (181-253)||(46814464-46814536)
chr1 (182-253)||(31585758-31585829)
chr1 (182-253)||(41920464-41920535)
chr1 (182-253)||(46692817-46692888)
chr1 (182-243)||(5389419-5389480)
chr1 (139-253)||(27031793-27031909)
chr1 (180-235)||(10785455-10785510)
chr1 (181-253)||(7857665-7857737)
chr1 (140-251)||(32864517-32864628)
chr1 (182-253)||(30685902-30685973)
chr1 (141-250)||(40933878-40933987)
chr1 (16-85)||(19598831-19598899)
chr1 (139-253)||(27905424-27905533)
chr1 (123-202)||(2988058-2988138)
chr1 (139-253)||(24684431-24684547)
chr1 (121-197)||(28395026-28395103)
chr1 (212-253)||(30655572-30655613)
chr1 (213-253)||(5459173-5459213)
chr1 (179-235)||(16147585-16147641)
chr1 (202-241)||(9313307-9313346)
chr1 (199-253)||(46603404-46603458)
chr1 (212-253)||(15840940-15840981)
chr1 (216-253)||(38564913-38564950)
chr1 (184-248)||(9081506-9081569)
chr1 (212-252)||(42374049-42374089)
[»] chr7 (44 HSPs)
chr7 (106-253)||(48058576-48058723)
chr7 (111-253)||(47456949-47457091)
chr7 (104-253)||(13311851-13312000)
chr7 (108-253)||(11379052-11379196)
chr7 (108-253)||(9428030-9428174)
chr7 (121-250)||(12480901-12481031)
chr7 (122-253)||(46133214-46133347)
chr7 (122-253)||(38485568-38485698)
chr7 (125-250)||(3478367-3478492)
chr7 (139-253)||(6584921-6585037)
chr7 (125-253)||(6716678-6716805)
chr7 (116-240)||(22568043-22568168)
chr7 (139-253)||(34389974-34390090)
chr7 (125-253)||(42533194-42533321)
chr7 (125-252)||(8745166-8745293)
chr7 (182-253)||(47325883-47325954)
chr7 (139-253)||(41089701-41089817)
chr7 (125-250)||(24324738-24324864)
chr7 (135-253)||(1320806-1320925)
chr7 (182-250)||(3419654-3419722)
chr7 (182-253)||(38306273-38306344)
chr7 (182-252)||(10244195-10244265)
chr7 (179-253)||(23983207-23983281)
chr7 (181-241)||(35745824-35745884)
chr7 (182-253)||(9349761-9349832)
chr7 (134-249)||(26386125-26386240)
chr7 (135-250)||(3867131-3867248)
chr7 (180-253)||(16954665-16954739)
chr7 (139-235)||(36449113-36449210)
chr7 (17-85)||(47456841-47456909)
chr7 (182-249)||(5860286-5860353)
chr7 (195-253)||(1820013-1820071)
chr7 (196-242)||(33435132-33435178)
chr7 (107-192)||(9107234-9107319)
chr7 (216-253)||(27993568-27993605)
chr7 (182-235)||(37795019-37795072)
chr7 (99-147)||(12546322-12546370)
chr7 (39-85)||(9107355-9107401)
chr7 (180-241)||(16828931-16828993)
chr7 (205-258)||(17802837-17802890)
chr7 (220-253)||(25153232-25153265)
chr7 (182-243)||(44353562-44353623)
chr7 (216-253)||(46262151-46262188)
chr7 (213-253)||(25160827-25160867)
[»] chr4 (41 HSPs)
chr4 (88-253)||(12296187-12296352)
chr4 (106-242)||(28966890-28967026)
chr4 (106-253)||(38929839-38929986)
chr4 (125-253)||(35800501-35800629)
chr4 (97-220)||(21983734-21983857)
chr4 (140-250)||(16501746-16501858)
chr4 (112-253)||(46698712-46698854)
chr4 (125-253)||(53823362-53823490)
chr4 (180-253)||(25753184-25753257)
chr4 (118-241)||(41117901-41118024)
chr4 (164-253)||(19673113-19673201)
chr4 (180-253)||(22811156-22811229)
chr4 (125-253)||(19815161-19815293)
chr4 (136-253)||(24740054-24740172)
chr4 (125-253)||(38637174-38637301)
chr4 (129-251)||(39420958-39421080)
chr4 (172-253)||(6599932-6600014)
chr4 (139-253)||(21387159-21387273)
chr4 (121-210)||(43374031-43374120)
chr4 (121-243)||(43077000-43077126)
chr4 (164-253)||(8255039-8255129)
chr4 (164-253)||(8268457-8268547)
chr4 (12-85)||(38930021-38930094)
chr4 (180-253)||(49747539-49747612)
chr4 (125-253)||(2061679-2061807)
chr4 (182-253)||(4305737-4305808)
chr4 (181-236)||(35341335-35341390)
chr4 (31-85)||(21983654-21983708)
chr4 (28-85)||(12296370-12296426)
chr4 (181-249)||(2825799-2825867)
chr4 (181-253)||(31050659-31050731)
chr4 (14-86)||(46487465-46487536)
chr4 (180-236)||(48098362-48098418)
chr4 (247-284)||(21988007-21988045)
chr4 (196-242)||(30167576-30167622)
chr4 (186-252)||(30964454-30964520)
chr4 (247-284)||(38929789-38929827)
chr4 (180-241)||(16833017-16833078)
chr4 (196-253)||(36962628-36962684)
chr4 (212-253)||(39041302-39041343)
chr4 (216-253)||(40813813-40813850)
[»] chr3 (30 HSPs)
chr3 (98-249)||(47945722-47945873)
chr3 (115-253)||(5556582-5556721)
chr3 (121-248)||(1652823-1652950)
chr3 (122-253)||(27398970-27399102)
chr3 (127-253)||(33143891-33144018)
chr3 (125-243)||(823375-823494)
chr3 (121-250)||(30935326-30935456)
chr3 (139-253)||(43012387-43012503)
chr3 (181-253)||(19176514-19176586)
chr3 (107-241)||(25594454-25594577)
chr3 (182-253)||(17550969-17551040)
chr3 (146-253)||(9584013-9584122)
chr3 (139-250)||(23328303-23328416)
chr3 (180-250)||(37123397-37123467)
chr3 (181-250)||(39021273-39021342)
chr3 (155-253)||(40023541-40023641)
chr3 (180-253)||(14193952-14194027)
chr3 (181-253)||(45398808-45398880)
chr3 (125-253)||(14879447-14879576)
chr3 (121-225)||(38488835-38488940)
chr3 (182-251)||(2392504-2392573)
chr3 (14-85)||(25594347-25594417)
chr3 (195-253)||(30127274-30127333)
chr3 (180-253)||(14755260-14755334)
chr3 (186-251)||(2394255-2394320)
chr3 (182-235)||(20611813-20611866)
chr3 (113-226)||(46358315-46358428)
chr3 (213-253)||(34475783-34475823)
chr3 (216-253)||(20710740-20710777)
chr3 (212-253)||(31424248-31424289)
[»] chr8 (23 HSPs)
chr8 (80-253)||(15906698-15906872)
chr8 (88-250)||(17720610-17720771)
chr8 (121-253)||(30236064-30236197)
chr8 (122-253)||(35062469-35062600)
chr8 (125-242)||(17656943-17657060)
chr8 (129-242)||(41791209-41791322)
chr8 (122-253)||(10552280-10552410)
chr8 (125-250)||(10248494-10248619)
chr8 (164-241)||(32945683-32945760)
chr8 (182-253)||(24995393-24995464)
chr8 (146-253)||(32066256-32066364)
chr8 (137-253)||(15821330-15821448)
chr8 (186-253)||(31207364-31207431)
chr8 (179-253)||(12198064-12198138)
chr8 (179-253)||(12442492-12442566)
chr8 (181-253)||(36630849-36630921)
chr8 (182-253)||(9519511-9519582)
chr8 (182-253)||(34389003-34389074)
chr8 (182-243)||(16457459-16457520)
chr8 (182-253)||(37986856-37986927)
chr8 (182-253)||(41893399-41893469)
chr8 (17-85)||(15906882-15906949)
chr8 (182-243)||(20138448-20138509)
[»] scaffold0499 (1 HSPs)
scaffold0499 (96-253)||(6570-6727)
[»] chr6 (18 HSPs)
chr6 (121-253)||(9224053-9224186)
chr6 (96-242)||(13098483-13098629)
chr6 (121-253)||(26534652-26534788)
chr6 (125-253)||(26215960-26216088)
chr6 (121-251)||(21266127-21266257)
chr6 (125-253)||(32935280-32935408)
chr6 (100-241)||(33968531-33968670)
chr6 (125-249)||(13423482-13423606)
chr6 (125-243)||(20701744-20701862)
chr6 (140-248)||(21265003-21265111)
chr6 (182-250)||(3117508-3117576)
chr6 (105-243)||(15944041-15944178)
chr6 (125-210)||(15120538-15120623)
chr6 (219-250)||(20499934-20499965)
chr6 (219-253)||(7546464-7546498)
chr6 (212-250)||(34105428-34105466)
chr6 (179-236)||(12794144-12794201)
chr6 (119-155)||(16180837-16180873)
[»] scaffold1613 (1 HSPs)
scaffold1613 (111-253)||(943-1086)
[»] scaffold0200 (1 HSPs)
scaffold0200 (125-253)||(19395-19523)
[»] scaffold0119 (1 HSPs)
scaffold0119 (180-253)||(42134-42207)
[»] scaffold0063 (1 HSPs)
scaffold0063 (164-250)||(58142-58228)
[»] scaffold0050 (1 HSPs)
scaffold0050 (139-241)||(36731-36835)
[»] scaffold0068 (1 HSPs)
scaffold0068 (182-253)||(35770-35840)
[»] scaffold0620 (1 HSPs)
scaffold0620 (212-253)||(3842-3883)


Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 5 - 284
Target Start/End: Complemental strand, 2063147 - 2062870
Alignment:
Q  5 cacctaaaaactccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataaatcactctgtccgcatcgc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2063147 cacctaaaaactccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataaatcactctgtccgcatcgc 2063048  T
Q  105 ctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagc 204  Q
    ||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2063047 ctaagctgagccactatt--aaagatcaatcagtttccacaacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagc 2062950  T
Q  205 caaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagacgggcaccccttaccccggtccaccagagaat 284  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2062949 caaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagacgggcaccccttaccccggtccaccagagaat 2062870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 16960150 - 16959994
Alignment:
Q  97 cgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaa 196  Q
    |||||| |||| | ||||||| ||||| ||||| ||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  16960150 cgcatcacctacgctgagccattattccaaagaacaatcaacttccaccagctcacaacctctggtccaccgaaagaacaccaaataagcccaaaaccaa 16960051  T
Q  197 acttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  16960050 acttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagac 16959994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 22885061 - 22885202
Alignment:
Q  112 gagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagag 211  Q
    |||||||||||||| ||||||||||  |||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||     
T  22885061 gagccactattctatagatcaatcaacttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaacccaaaaccaaacttgaaccaaagaa 22885160  T
Q  212 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  22885161 ctgactcccgatctcgaatcaaaagtgatcggcccaccagac 22885202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 94 - 253
Target Start/End: Original strand, 33788542 - 33788701
Alignment:
Q  94 gtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaac 193  Q
    |||| |||| |||||| |||||||||| |||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| | |||||| |    
T  33788542 gtcctcatcacctaagctgagccactaatctatagatcaatcagcttccaccacctctcaacctctggttcaccgaaagaacaccaaaacaacccaaagc 33788641  T
Q  194 caaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  33788642 caaacctgaaccaaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagac 33788701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 116 - 253
Target Start/End: Original strand, 15126342 - 15126479
Alignment:
Q  116 cactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctga 215  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||| |||||||||||||||||| ||||||||||| | ||    
T  15126342 cactattctaaagatcaataagtttccaccacctcacaacctccggaccaccgaaagaacaccataaaagcccaaaaccaaacatgagccaaagaaccga 15126441  T
Q  216 ctcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||  |||||| |||||||||    
T  15126442 ctcccgatctcgaatcaaaaatgatcggcccaccagac 15126479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 103 - 253
Target Start/End: Complemental strand, 27740137 - 27739987
Alignment:
Q  103 gcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttga 202  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||    
T  27740137 gcctaagttgagccactattccatagatcaatcagtttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaacccaagaccaaacttga 27740038  T
Q  203 gccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
     || ||   ||||||| |||||| ||||||||||||||||| |||||||||    
T  27740037 accgaaacactgactctcgatcttgaatcaaaagcgatcggcccaccagac 27739987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 253
Target Start/End: Complemental strand, 4472081 - 4471935
Alignment:
Q  106 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 205  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    ||||| ||| |||| |||||||||||| ||||||||||| |||||||||  |    
T  4472081 taagttgagccactattctaaagatcaatcagcttctaccacct-ttgacctccggtccaccaaaagaacaccaataaagcccaaaaacaaacttgaatc 4471983  T
Q  206 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  4471982 aaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagac 4471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 253
Target Start/End: Original strand, 25504831 - 25504978
Alignment:
Q  107 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacc-aaacttgagcc 205  Q
    |||||||||| |||||||||| |||||| || ||||||||||||  |||||  ||| || |||||||||||||||||||||||||||| |||| ||| ||    
T  25504831 aagttgagccgctattctaaatatcaattagcttccaccacctctgaaccttcggtccatcgaaagaacaccaaaaaagcccaaaaccaaaacctgaacc 25504930  T
Q  206 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  25504931 aaagaactgactcccgatctcgaattaaaagcgataggtccaccagac 25504978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 243
Target Start/End: Complemental strand, 3745489 - 3745356
Alignment:
Q  111 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagccc-aaaaccaaacttgagccaaag 209  Q
    |||||||||||||||||||||||||||  |||||||| |   |||||||| | ||||||||||||| ||||||||||| ||||| |||||| | ||||||    
T  3745489 tgagccactattctaaagatcaatcagcctccaccacttttaaacctctgatccaccgaaagaacaacaaaaaagcccaaaaacaaaacttaaaccaaag 3745390  T
Q  210 agctgactcccgatctcgaatcaaaagcgatcgg 243  Q
    | |||||| |||||||||||| ||||||||||||    
T  3745389 aactgacttccgatctcgaattaaaagcgatcgg 3745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 27880054 - 27880188
Alignment:
Q  107 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcca 206  Q
    ||||||||||| |||||| |||||||||||| || ||||||||| || |||| ||| ||||||||||||| ||||| |||||||| |||||||||| |||    
T  27880054 aagttgagccattattctcaagatcaatcagctttcaccacctctcatcctccggt-caccgaaagaacaacaaaacagcccaaa-ccaaacttgaacca 27880151  T
Q  207 aagagctgactcccgatctcgaatcaaaagcgatcgg 243  Q
    || | |||||| ||||||||||||||||| |||||||    
T  27880152 aataactgacttccgatctcgaatcaaaatcgatcgg 27880188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 119 - 253
Target Start/End: Original strand, 10173512 - 10173647
Alignment:
Q  119 tattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaa-aaaagcccaaaaccaaacttgagccaaagagctgact 217  Q
    ||||| |||||||| |||  |||||||||||| | ||||| | | ||||||||||||||||| |||||||||||||||||||||||||||| | || |||    
T  10173512 tattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaaagaacaccaacaaaagcccaaaaccaaacttgagccaaataacttact 10173611  T
Q  218 cccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
     |||||||||||||||||| |||||| |||| ||||    
T  10173612 tccgatctcgaatcaaaagtgatcggcccactagac 10173647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 16952337 - 16952434
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  16952337 ttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 16952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 17023002 - 17023099
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17023002 ttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 17060308 - 17060405
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17060308 ttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17060405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 18681208 - 18681080
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 221  Q
    ||||||||||| |||| || |||||||   ||||||||| | |||| || |||||||| |||||||||||||||||||||| ||| ||| ||||||||||    
T  18681208 tctaaagatcattcagctttcaccaccgtgcaacctctgatccaccaaaggaacaccacaaaagcccaaaaccaaacttgaaccagagaactgactcccg 18681109  T
Q  222 atctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||||| || ||||| ||||||    
T  18681108 atctcgaatcaaatgcaatcggcccacca 18681080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 31902352 - 31902483
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 221  Q
    ||||||||||| |||| |||| ||||| | ||||||| ||| |||| || ||||| |||| |||| ||||||||||||||| ||| ||| ||||||||||    
T  31902352 tctaaagatcattcagcttcccccaccacgcaacctccggtccaccaaaggaacatcaaataagctcaaaaccaaacttgaaccagagaactgactcccg 31902451  T
Q  222 atctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||| ||||||||| || |||||||||    
T  31902452 atctcgaattaaaagcgattggcccaccagac 31902483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 14405330 - 14405210
Alignment:
Q  135 cagtttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatca 232  Q
    |||||||||| ||| | | || |||| | |||||||||| ||| |||  ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  14405330 cagtttccacaaccactcgacttctgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatca 14405231  T
Q  233 aaagcgatcggtccaccagac 253  Q
    |||| |||||| |||||||||    
T  14405230 aaagtgatcggcccaccagac 14405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 43816384 - 43816469
Alignment:
Q  112 gagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa 197  Q
    ||||||||||||||||||||||||||  ||||||||||   |||||||||| ||||||||||| ||||||||||||||||||||||    
T  43816384 gagccactattctaaagatcaatcagcctccaccacctttaaacctctggtccaccgaaagaataccaaaaaagcccaaaaccaaa 43816469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 1269568 - 1269495
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  1269568 aaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 1269495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 17079271 - 17079199
Alignment:
Q  164 caccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17079271 caccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17079199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 125 - 244
Target Start/End: Complemental strand, 7696102 - 7695984
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    |||||||| |||| |||||||||||| | ||||  | | ||||||||||| |||  |||||||||||||| ||||||||||||||| |||||||||| |     
T  7696102 aaagatcattcagcttccaccacctcccgaccttcgatccaccgaaagaa-accgtaaaagcccaaaacctaacttgagccaaagaactgactcccggta 7696004  T
Q  225 tcgaatcaaaagcgatcggt 244  Q
    |||||||||||| |||||||    
T  7696003 tcgaatcaaaagtgatcggt 7695984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 253
Target Start/End: Complemental strand, 29487301 - 29487143
Alignment:
Q  95 tccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagccc-aaaac 193  Q
    |||||| | ||||||  |||||||||||| |   ||||||||| |||||||||| |||||||||||||  |||||||||||| || || ||||| |||||    
T  29487301 tccgcaactcctaagccgagccactattccatgaatcaatcagcttccaccaccacacaacctctggtcaaccgaaagaacatcataacagcccaaaaac 29487202  T
Q  194 caaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||| || |||| ||||||  | ||||||||||||||||||| || |||||||||    
T  29487201 caaacatgaaccgaagaactgactatcaatctcgaatcaaaagcgattgg-ccaccagac 29487143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 34230341 - 34230231
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||||| |||| |||||||||||| ||||||| | | ||||||||||| |||| ||||||||||||| ||||||||| ||||||| |||||||| |||    
T  34230341 aaagatcattcagcttccaccacctctcaacctccgatccaccgaaagaa-accacaaaaagcccaaaatcaaacttgatccaaagaactgactcctgat 34230243  T
Q  224 ctcgaatcaaaa 235  Q
    ||||||| ||||    
T  34230242 ctcgaataaaaa 34230231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 39338863 - 39338934
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  39338863 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagac 39338934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 7874375 - 7874303
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||    
T  7874375 aaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagac 7874303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 12793669 - 12793745
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaact 199  Q
    ||||||||||| |||| |||||||||| ||||||||| ||| || |||| |||||||| |||||||||||||||||||    
T  12793669 tctaaagatcattcagcttccaccaccgcacaacctccggtcca-cgaaggaacaccataaaagcccaaaaccaaact 12793745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 13337414 - 13337286
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||||| ||||| | ||||||||| | |||||   | ||||||||||| |||| |||||| |||||||| |||||||| |||||| |||||| |||||    
T  13337414 aaagatcattcagtgttcaccacctctcgacctcctatccaccgaaagaa-accataaaaagtccaaaacctaacttgagtcaaagaactgacttccgat 13337316  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
     |||||||||||| |||||| ||| |||||    
T  13337315 ttcgaatcaaaagtgatcggcccatcagac 13337286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 37770583 - 37770707
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    |||||||| |||| ||||| |||||| | ||||| | | ||||||||||| |||| ||||||||||||||||| |||| | |||||  ||||||| ||||    
T  37770583 aaagatcattcagcttccaacacctctcgacctccgattcaccgaaagaa-accataaaagcccaaaaccaaaattgatctaaagaattgactcctgatc 37770681  T
Q  225 tcgaatcaaaagcgatcggtccacca 250  Q
      |||||||||| |||||| ||||||    
T  37770682 cagaatcaaaagtgatcggcccacca 37770707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 915408 - 915518
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcg 238  Q
    |||||||||| | ||||||| ||| ||||||||||| || |||||   ||||||||||||||||  |||| | ||||||  |||||||||||||||||||    
T  915408 ttccaccaccgcgcaacctccggtgcaccgaaagaatactaaaaagctccaaaaccaaacttgaatcaaa-aactgactttcgatctcgaatcaaaagcg 915506  T
Q  239 atcggtccacca 250  Q
    ||| | ||||||    
T  915507 atcagcccacca 915518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 14106520 - 14106593
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| || |||||||||  ||| | |||||||||||||||||||| |||||||||| |||||| |||||||||    
T  14106520 aaaaacccaaaaaccaaaactgatctaaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagac 14106593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 20572218 - 20572130
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaaga 210  Q
    ||||||||||  |||||||| | || ||| |||| |||| | ||||||||||||||||||||| ||||||| ||||||| || ||||||    
T  20572218 tctaaagatcgttcagtttcaagcatctctcaacttctgatccaccgaaagaacaccaaaaaaacccaaaatcaaacttaagtcaaaga 20572130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 387257 - 387185
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||| ||||| | |||||||| ||||||  |||||||||||||| ||||||||| |||| | |||||||||    
T  387257 aaaagctcaaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagac 387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 4162041 - 4162089
Alignment:
Q  205 caaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||| ||||| ||||||||||||||||||||| |||||| |||||||||    
T  4162041 caaaaagctggctcccgatctcgaatcaaaagtgatcggcccaccagac 4162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 5254340 - 5254268
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||| ||| | ||||||| ||||||||| ||||||||||||| ||| ||||| |||||| |||| ||||    
T  5254340 aaaagcccgaaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagac 5254268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 10524149 - 10524109
Alignment:
Q  213 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  10524149 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 10524109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 23650437 - 23650397
Alignment:
Q  213 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  23650437 tgactcccgatctcgaatcaaaagcgatcagcccaccagac 23650397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 36276182 - 36276240
Alignment:
Q  194 caaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| | | |||||||||    
T  36276182 caaacttgagtcaaagat-tgactcccgatctcgaatcaaaagcgaacagcccaccagac 36276240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 9560820 - 9560854
Alignment:
Q  216 ctcccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||||||||||||| |||||||||||||    
T  9560820 ctcccgatctcgaatcaaaagtgatcggtccacca 9560854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 29044778 - 29044836
Alignment:
Q  126 aagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa 184  Q
    |||||||| |||  ||||||||  ||||||||||||| ||||||||||||||| |||||    
T  29044778 aagatcaaacagcctccaccactgcacaacctctggtccaccgaaagaacacctaaaaa 29044836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 14566446 - 14566410
Alignment:
Q  247 accagacgggcaccccttaccccggtccaccagagaa 283  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  14566446 accagacgggcacccctaaccccagtccaccagagaa 14566410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 41086738 - 41086826
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctga 215  Q
    |||||||| |||| |||||||||||| | ||||| | | ||||||||| | |||| ||||||||||||||||||||  | ||||||||||||    
T  41086738 aaagatcattcagcttccaccacctctcgacctccgatccaccgaaagga-accataaaaagcccaaaaccaaact--atccaaagagctga 41086826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 106 - 253
Target Start/End: Original strand, 22675246 - 22675393
Alignment:
Q  106 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 205  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||  ||| ||||||||||||  ||||||||||||||||||||||||    
T  22675246 taagttgagccactagtctaaagatcaatcaacttccaccacctcacaacctccggaccactgaaagaacaccattaaagcccaaaaccaaacttgagcc 22675345  T
Q  206 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  22675346 aaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagac 22675393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 27713238 - 27713081
Alignment:
Q  96 ccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacca 195  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |  ||||||||||||| || |||||||||||||||    
T  27713238 ccgcatcccataagttgagccactattctaaagatcaataagtttccaccacctgacaacctctagaccaccgaaagaacaacataaaagcccaaaacca 27713139  T
Q  196 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||| |||| ||||    
T  27713138 aacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagac 27713081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 111 - 253
Target Start/End: Original strand, 39184112 - 39184256
Alignment:
Q  111 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa--cttgagccaaa 208  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||| |||||    
T  39184112 tgagccactattcaaaagatcaatcagcttccactacctcacaacctctggtccaccgaaagaacaccaaaaaagctcaaaaccaaatgcttgaaccaaa 39184211  T
Q  209 gagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    || |||||| |||||||||||||||||| |||||| |||||||||    
T  39184212 gaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 39184256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 253
Target Start/End: Complemental strand, 8731076 - 8730929
Alignment:
Q  107 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacc-aaacttgagcc 205  Q
    |||||||||| |||||||||| |||||| || ||||||||||||  |||||  ||| || |||||||||||||||||||||||||||| |||| ||| ||    
T  8731076 aagttgagccgctattctaaatatcaattagcttccaccacctctgaaccttcggtccatcgaaagaacaccaaaaaagcccaaaaccaaaacctgaacc 8730977  T
Q  206 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  8730976 aaagaactgactcccgatctcgaattaaaagcgataggtccaccagac 8730929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 13954175 - 13954303
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||||||||||||||||||||||  |||| || | | ||||||||||| |||| ||||||||||||||||||||||||||||||   |||||||||||    
T  13954175 aaagatcaatcagtttccaccacctttcaacttccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgagccaaagtaatgactcccgat 13954273  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||| |||||| |||||||||    
T  13954274 ctcgaatcaaaagtgatcggcccaccagac 13954303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 24072190 - 24072323
Alignment:
Q  107 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcca 206  Q
    |||||||| |||||||||||||| || ||||  || |||||||  ||||||| ||| ||||||||||||||||||||| ||| ||| | ||||||| |||    
T  24072190 aagttgagtcactattctaaagaccattcagcatcaaccacctttcaacctccggtccaccgaaagaacaccaaaaaaaccccaaatc-aacttgaacca 24072288  T
Q  207 aagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    |||| |||||| |||||||| ||||||||||||||    
T  24072289 aagaactgacttccgatctcaaatcaaaagcgatc 24072323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 8297594 - 8297498
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    |||||||||||||| ||||| | | ||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8297594 ttccaccacctcacgacctccgattcaccgaaagaa-accataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 8297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 31721820 - 31721699
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 221  Q
    |||||||||||||||  |||||||||| | |||| || ||| ||| ||| ||||||||||| | ||||||||||||  ||| ||| ||| ||||||||||    
T  31721820 tctaaagatcaatcaacttccaccaccgcgcaacatccggtccactgaaggaacaccaaaacaacccaaaaccaaaaatgaaccagagaactgactcccg 31721721  T
Q  222 atctcgaatcaaaagcgatcgg 243  Q
    ||||||||||||||||||||||    
T  31721720 atctcgaatcaaaagcgatcgg 31721699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 14302371 - 14302499
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    ||||||||  ||| |||||||||||| | ||||| | | ||||||||||| |||| ||||||||||||||||||||||  ||||||| ||||||||| ||    
T  14302371 aaagatcatgcagcttccaccacctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgctccaaagaactgactcccaat 14302469  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||| |||||| |||| |||||||||||    
T  14302470 ctcgaaccaaaagtgatcagtccaccagac 14302499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 698444 - 698373
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  698444 aaagcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagac 698373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 7391979 - 7392100
Alignment:
Q  126 aagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatct 225  Q
    |||||||||| | ||| |||||||| | ||||| | | ||||||||||| |||| ||||||||||||||||      |||||||| ||||||||||||||    
T  7391979 aagatcaatccgcttcaaccacctctcgacctccgatccaccgaaagaa-accataaaagcccaaaaccaat-----gccaaagaactgactcccgatct 7392072  T
Q  226 cgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| ||||||||||||||||    
T  7392073 cgaatcaaaagtgatcggtccaccagac 7392100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 21402778 - 21402903
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    ||||||||||||  |||||||||||| |||||||   | ||||||||||| |||| ||||||| ||||||||||| |||| |||||| ||||||||||||    
T  21402778 aaagatcaatcaacttccaccacctctcaacctccaatccaccgaaagaa-accataaaaagctcaaaaccaaacctgagtcaaagaactgactcccgat 21402876  T
Q  224 ctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||  ||||| |||||| ||||||    
T  21402877 ctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 7195181 - 7195308
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    |||||| | |||| |||||| ||||| | ||||| | | |||||||| || |||| |||||||||||  | ||||||||||||||| |||||||||||||    
T  7195181 aaagattattcagcttccacgacctctcgacctccgatccaccgaaaaaa-accataaaagcccaaactctaacttgagccaaagaactgactcccgatc 7195279  T
Q  225 tcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| ||||||  ||||||||    
T  7195280 tcgaatcaaaagtgatcggctcaccagac 7195308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 34378210 - 34378110
Alignment:
Q  154 acctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccaga 252  Q
    ||||| ||| |||||||||| ||| ||| ||||||||||| | |||||| | |||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  34378210 acctccggtccaccgaaagagcacaaaacaaagcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga 34378111  T
Q  253 c 253  Q
    |    
T  34378110 c 34378110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 93 - 253
Target Start/End: Complemental strand, 23426505 - 23426356
Alignment:
Q  93 tgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaa 192  Q
    |||||||| | |||||| |||||||| |||| |  |||||||||| |||||||||| ||||||||||||| |||||||| |           ||||||||    
T  23426505 tgtccgcaactcctaagctgagccacaattccatggatcaatcagcttccaccaccacacaacctctggtccaccgaaata-----------gcccaaaa 23426417  T
Q  193 ccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||  | |||| ||||||||| ||||||||||||||| | ||||||||||||||    
T  23426416 ccaaaattgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagac 23426356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 25992092 - 25992019
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||| || |||| ||||| ||||||| ||||||||||||||||||||| || |||||||||    
T  25992092 aaaaagcccaaaaccaacctcgagctaaagaactgactctcgatctcgaatcaaaagcgattggcccaccagac 25992019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 26045960 - 26046033
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||| ||||||||||||||||||||||   || |||||||||||||||||||||| ||||||| ||||||||    
T  26045960 aaaaagtccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcggttcaccagac 26046033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 17854001 - 17854133
Alignment:
Q  119 tattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaa-aagcccaaaaccaaacttgagccaaagagctgact 217  Q
    |||||||||||||| |||  |||||||||||| |||| || ||| |||||||||||||  |||| |||||||||    ||||||| ||||| |  |||||    
T  17854001 tattctaaagatcattcaacttccaccacctctcaacttcaggtccaccgaaagaacattaaaataagcccaaagtagaacttgaaccaaataattgact 17854100  T
Q  218 cccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||| ||||||||| |||| ||||||    
T  17854101 cccgatctcgagtcaaaagcggtcggcccacca 17854133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 39024452 - 39024506
Alignment:
Q  186 cccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgat 240  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  39024452 cccaaaaccaaacttgaaccaaagaagtgactcccgatctcgaatcaaaagcgat 39024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 253
Target Start/End: Original strand, 33258862 - 33258951
Alignment:
Q  164 caccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| |||| |||||||||||| |||| || || ||||||| || ||||| |||||||||||||||| |||||| |||||||||    
T  33258862 caccgaaagaa-accataaaaagcccaaatccaacctcgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagac 33258951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 18593325 - 18593267
Alignment:
Q  183 aagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    |||||||||| | |||||||| |||||| || |||||||||||||||||||||| ||||    
T  18593325 aagcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatc 18593267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 29087541 - 29087493
Alignment:
Q  205 caaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||| |||||||| |||||||||||||||| |||| |||||||||||    
T  29087541 caaagaactgactcctgatctcgaatcaaaagggatcagtccaccagac 29087493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 25658131 - 25658217
Alignment:
Q  164 caccgaaagaacaccaaaaa-agcccaaaaccaaa-cttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccac 248  Q
    |||||||||||||||| ||| |||||||||| ||| |||||   ||||| |||||||||  ||| ||||||||||||||||| ||||    
T  25658131 caccgaaagaacaccataaatagcccaaaacaaaaacttgaattaaagaactgactcccagtctagaatcaaaagcgatcggcccac 25658217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 39184012 - 39184071
Alignment:
Q  24 gaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    ||||||||||||| ||||||| |||||||||||| |||| ||||||||| | ||||||||||    
T  39184012 gaaacgaccactg-aaaaacggtatccataacca-acatcgccactacttatcccaaaataa 39184071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 17853870 - 17853937
Alignment:
Q  14 actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaa 82  Q
    ||||||| | ||||||| ||||||||| ||||||||||||||||  |||  |||||||||| |||||||    
T  17853870 actcctttacgaaacgatcactgaaaa-acgatatccataaccacccatcaccactactcaccccaaaa 17853937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 31742428 - 31742377
Alignment:
Q  30 accactgaaaaaacgatatccataaccatacattgccactactcaacccaaaa 82  Q
    ||||||||||||||||||||||||| ||  ||| ||||||||||| |||||||    
T  31742428 accactgaaaaaacgatatccataa-cacccatcgccactactcaccccaaaa 31742377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 241
Target Start/End: Original strand, 50589023 - 50589264
Alignment:
Q  14 actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaa-----------taaat----cactctgtccg 98  Q
    |||||| |||||| ||||||| |||||| ||||||||||||||   |||||||||||||||||||||||           |||||    ||||| ||| |    
T  50589023 actcctacaagaaccgaccaccgaaaaa-cgatatccataacctcccattgccactactcaacccaaaaataaccccctctaaatgaaacactccgtctg 50589121  T
Q  99 catcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaac 198  Q
    |||| |||||||||||| ||||||| ||||||||||||  ||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  50589122 catcacctaagttgagctactattccaaagatcaatcaacttctaccacctcacaacctctggtccaccgaaagaacactaaataagcccaaaaccaaac 50589221  T
Q  199 ttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    ||| |||||||| ||| |||||||| |||||||||||||||||    
T  50589222 ttgggccaaagaactggctcccgatttcgaatcaaaagcgatc 50589264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 106 - 253
Target Start/End: Complemental strand, 19598795 - 19598648
Alignment:
Q  106 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 205  Q
    |||||||||||  ||||||||||||||||||  |||||||||||||||||||| ||  |||||||||||||||| |||| ||||||| |||||||||| |    
T  19598795 taagttgagccgttattctaaagatcaatcaacttccaccacctcacaacctccggaccaccgaaagaacaccataaaaacccaaaatcaaacttgagtc 19598696  T
Q  206 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  19598695 aaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagac 19598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 94 - 253
Target Start/End: Complemental strand, 42374335 - 42374175
Alignment:
Q  94 gtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaac 193  Q
    |||| |||| || ||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||  |||||||||| ||||| |||||||||||    
T  42374335 gtcctcatcaccaaagttgagccactattctaaagatcaatcagcttccaccacctctcaatctccggtatgccgaaagaacgccaaacaagcccaaaac 42374236  T
Q  194 c-aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    | |||||||| |||||   ||||||||||||||| ||||||||||||||||||||||||||    
T  42374235 caaaacttgaaccaaaagactgactcccgatctcaaatcaaaagcgatcggtccaccagac 42374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 253
Target Start/End: Complemental strand, 17033760 - 17033598
Alignment:
Q  93 tgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacac-caaaaaagcccaaa 191  Q
    ||||| |||| || ||||||||||| ||||||||||||||||||| || || ||||||| |||||| ||  | ||||||||||||  |||||||||||||    
T  17033760 tgtcctcatcaccaaagttgagccattattctaaagatcaatcagcttgcatcacctcataacctcaggatcgccgaaagaacacaaaaaaaagcccaaa 17033661  T
Q  192 acc-aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||| |||||||| ||||||| ||||||||||||||||| ||||||| |||||| |||||||||    
T  17033660 accaaaacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagac 17033598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 4651922 - 4651792
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 221  Q
    ||||||||||| |||| |||||||||| | ||||||| ||| ||||||| |||||||||||||||||||||||||||| || ||| ||| ||||||||||    
T  4651922 tctaaagatcattcagcttccaccaccgcgcaacctccggtccaccgaaggaacaccaaaaaagcccaaaaccaaactagaaccagaga-ctgactcccg 4651824  T
Q  222 atctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||| |||||| || ||||||    
T  4651823 atctcgaatcaaaagtgatcggccccccagac 4651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 253
Target Start/End: Original strand, 38544664 - 38544807
Alignment:
Q  111 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagccaaag 209  Q
    ||||||||||||||||||||||||||  ||||||||| ||  || ||| | | || ||| ||||||| |||||| | |||||||||| ||| | ||||||    
T  38544664 tgagccactattctaaagatcaatcatcttccaccacttcttaatctccgattcatcgagagaacactaaaaaacctcaaaaccaaaacttaaaccaaag 38544763  T
Q  210 agctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    | |||||||||||||||||||||||||||||||| |||||||||    
T  38544764 aactgactcccgatctcgaatcaaaagcgatcggcccaccagac 38544807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 27102331 - 27102213
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    |||||||| |||| |||||||||||| | ||||| | | |||||||||||  |  ||||||||||||||||||||||| ||||||| |||||||||||||    
T  27102331 aaagatcattcagcttccaccacctctcgacctccgatccaccgaaagaaaccgtaaaaagcccaaaaccaaacttgatccaaagaactgactcccgatc 27102232  T
Q  225 tcgaatcaaaagcgatcgg 243  Q
    |||||||||||| ||||||    
T  27102231 tcgaatcaaaagtgatcgg 27102213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 34775007 - 34774882
Alignment:
Q  129 atcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagcc-aaagagctgactcccgatctc 226  Q
    ||||||||| |||||||||||| |||||||   | ||||||||||| |||| |||||||||||||| ||||||||||| ||| | |||||||||||||||    
T  34775007 atcaatcagcttccaccacctctcaacctccaattcaccgaaagaa-accataaaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctc 34774909  T
Q  227 gaatcaaaagcgatcggtccaccagacg 254  Q
    | |||||||| |||||||||||||||||    
T  34774908 g-atcaaaagtgatcggtccaccagacg 34774882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 6583157 - 6583285
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    ||||||||||||| |||||||||||| | ||||| | | ||||||||||| |||| |||||||  |||||||||  ||| |||||||  ||||| |||||    
T  6583157 aaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaa-accataaaaagcaaaaaaccaaaactgatccaaagaattgactgccgat 6583255  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||| ||||||||||||||||    
T  6583256 ctcgaatcaaaagtgatcggtccaccagac 6583285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 24659057 - 24658941
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  24659057 ttccacaacctctcgacctccgatccaccgaaagagcacaaaaccaaagcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaag 24658958  T
Q  237 cgatcggtccaccagac 253  Q
     ||| || |||||||||    
T  24658957 tgattggcccaccagac 24658941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 46814464 - 46814536
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  46814464 aaaagccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagac 46814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 31585758 - 31585829
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  31585758 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 31585829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 41920535 - 41920464
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  41920535 aaagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 41920464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 46692817 - 46692888
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||||||| |||||| |||||||||    
T  46692817 aaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagac 46692888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 5389419 - 5389480
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 243  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  5389419 aaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg 5389480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 27031793 - 27031909
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    |||||| ||||| ||||||| | | |||||||||| ||| |||  ||| ||| ||| | ||||||||||||||||||||||| |||||||||||||||||    
T  27031793 ttccacaacctctcaacctccgatccaccgaaagagcacaaaacaaaatccctaaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaag 27031892  T
Q  237 cgatcggtccaccagac 253  Q
     |||||| |||| ||||    
T  27031893 tgatcggcccactagac 27031909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 10785455 - 10785510
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  10785455 aaaaagcccaaaaccaaacttgagccaaacaactgactcccgatctcgaagcaaaa 10785510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 7857737 - 7857665
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| |||||| | ||||| ||| |||||| |||||||||||||||||||||||| |||||| |||||||||    
T  7857737 aaaaggccaaaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagac 7857665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 32864517 - 32864628
Alignment:
Q  140 tccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcg 238  Q
    ||||||||||| | ||||||| | |||  |||||| |||| |||||||||||||||||||||||| |||||| | |||| |||||||||||| ||||| |    
T  32864517 tccaccacctcccgacctctgatccacaaaaagaa-accataaaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtg 32864615  T
Q  239 atcggtccaccag 251  Q
    || || |||||||    
T  32864616 attggcccaccag 32864628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 30685902 - 30685973
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||| ||||||||| |||||| |||| ||||    
T  30685902 aaagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagac 30685973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 40933987 - 40933878
Alignment:
Q  141 ccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcga 239  Q
    |||||||||| |||||||| || || ||||| |||||||||||| |  ||||| |||| |||| ||||| | |||||| |||||||| ||||||||||||    
T  40933987 ccaccacctctcaacctctagtccatcgaaa-aacaccaaaaaaagttcaaaatcaaaattgaaccaaataactgacttccgatctcaaatcaaaagcga 40933889  T
Q  240 tcggtccacca 250  Q
    ||||| |||||    
T  40933888 tcggttcacca 40933878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 19598899 - 19598831
Alignment:
Q  16 tccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    ||||||| ||||| |||||| ||||||| | |||||||||||| ||| ||||||||||||||||||||||    
T  19598899 tccttcacgaaaccaccact-aaaaaacaaaatccataaccatccatcgccactactcaacccaaaataa 19598831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 27905533 - 27905424
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcg 238  Q
    |||||||||||| ||||||| ||| ||||||||  |||||| |   ||||||||| |||| |||  |||||| || ||| | |||||||||||||||| |    
T  27905533 ttccaccacctctcaacctccggtccaccgaaa--acaccata---gcccaaaacaaaacatgaatcaaagaactaacttctgatctcgaatcaaaagtg 27905439  T
Q  239 atcggtccaccagac 253  Q
    |||||||||||||||    
T  27905438 atcggtccaccagac 27905424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 2988058 - 2988138
Alignment:
Q  123 ctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttga 202  Q
    |||||||||| |||| |||||||||| ||||||||| |||  | |||| ||||||| |||||||||||||| |||||||||    
T  2988058 ctaaagatcattcagcttccaccaccgcacaacctccggtctatcgaaggaacaccaaaaaaagcccaaaatcaaacttga 2988138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 24684431 - 24684547
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||||||||| | |||| ||| |||||| |||||  |||||||||||| |||||    
T  24684431 ttccacaacctcgcgacctccgatccaccgaaagagcacaaaacaaaagcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaag 24684530  T
Q  237 cgatcggtccaccagac 253  Q
     |||||| |||||||||    
T  24684531 tgatcggcccaccagac 24684547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 28395026 - 28395103
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaa-aaaagcccaaaaccaaa 197  Q
    |||||||||||| |||  |||||||| | ||||||||| ||| |||| ||||| |||||| |||||||||||||||||    
T  28395026 ttctaaagatcattcaccttccaccaacccacaacctccggtccaccaaaagagcaccaataaaagcccaaaaccaaa 28395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 30655613 - 30655572
Alignment:
Q  212 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  30655613 ctgactcccgatctcgaatcaaaagcgatcggcccactagac 30655572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 5459213 - 5459173
Alignment:
Q  213 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  5459213 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 5459173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 16147641 - 16147585
Alignment:
Q  179 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    ||||||| |||||| ||||||||| ||||||| |||||||||||| | |||||||||    
T  16147641 aaaaaagtccaaaatcaaacttgacccaaagaactgactcccgatattgaatcaaaa 16147585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 9313307 - 9313346
Alignment:
Q  202 agccaaagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  9313307 agccaaagaactgactcccgatctcgaatcaaaagtgatc 9313346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 46603458 - 46603404
Alignment:
Q  199 ttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||| ||||||| ||||||| ||||||||||||||||||||  || |||||||||    
T  46603458 ttgaaccaaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagac 46603404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 15840940 - 15840981
Alignment:
Q  212 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||||||| |||| | |||||||||    
T  15840940 ctgactcccgatctcgaatcaaaagtgatcagcccaccagac 15840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 38564950 - 38564913
Alignment:
Q  216 ctcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  38564950 ctcccgatctcgaatcaaaagcgatcggcccacgagac 38564913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 9081506 - 9081569
Alignment:
Q  184 agcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccac 248  Q
    ||||||||| ||||||||| | ||||  ||| ||||||||||||||||||||| ||||| |||||    
T  9081506 agcccaaaagcaaacttga-ctaaagcactggctcccgatctcgaatcaaaagtgatcgatccac 9081569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 42374089 - 42374049
Alignment:
Q  212 ctgactcccgatctcgaatcaaaagcgatcggtccaccaga 252  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  42374089 ctgactcccgatctcgaatcaaaagtaaccggtccaccaga 42374049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 106 - 253
Target Start/End: Original strand, 48058576 - 48058723
Alignment:
Q  106 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 205  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |  ||||||||||||| || ||||| |||||||||||||||||||    
T  48058576 taagttgagccactattctaaagatcaatcagcttccaccacctcacaacctccagaccaccgaaagaacaacataaaaggccaaaaccaaacttgagcc 48058675  T
Q  206 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||| | |||||| |||||||| |||||||||||||||  |||||||||    
T  48058676 aaaaaactgacttccgatctcaaatcaaaagcgatcgacccaccagac 48058723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 111 - 253
Target Start/End: Original strand, 47456949 - 47457091
Alignment:
Q  111 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaaga 210  Q
    |||| ||||||||||||||||||| || ||||||||||||||||| || ||  |||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  47456949 tgagtcactattctaaagatcaattagcttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaaga 47457048  T
Q  211 gctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
     ||||||||| ||||| |||||||||||||||||||| |||||    
T  47457049 actgactcccaatctcaaatcaaaagcgatcggtccatcagac 47457091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 13312000 - 13311851
Alignment:
Q  104 cctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgag 203  Q
    |||||| |||| |||||||||||| ||||||||| | |||||||||| |||||||| || || ||||||||| |||||| ||||||| ||| |||||||     
T  13312000 cctaagctgagacactattctaaatatcaatcagctcccaccacctctcaacctctagtccatcgaaagaacgccaaaacagcccaacacctaacttgaa 13311901  T
Q  204 ccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  13311900 ccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 13311851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 253
Target Start/End: Original strand, 11379052 - 11379196
Alignment:
Q  108 agttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagcca 206  Q
    |||||||||| |||||||||||||||||||  ||||||||||   ||||||||||  |||  |||||||||||||||||||||||||||| ||||| |||    
T  11379052 agttgagccattattctaaagatcaatcagcctccaccacctataaacctctggtcaacc--aagaacaccaaaaaagcccaaaaccaaaacttgaacca 11379149  T
Q  207 aagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||  ||||||||||||||||||||||||||||||||  ||||||||    
T  11379150 aagtactgactcccgatctcgaatcaaaagcgatcggctcaccagac 11379196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 253
Target Start/End: Original strand, 9428030 - 9428174
Alignment:
Q  108 agttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaa 207  Q
    |||||||||||||||| | |||||||| || ||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||||| || || |    
T  9428030 agttgagccactattccatagatcaat-agcttccaccacttcacaacctctggtccaccgaaagaacaccaaaacagcccaagaccaaactagaaccga 9428128  T
Q  208 agagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||| |||||| | |||||||||||||||| ||||||  ||||||||    
T  9428129 agaactgacttctgatctcgaatcaaaagtgatcggctcaccagac 9428174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 250
Target Start/End: Complemental strand, 12481031 - 12480901
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttgagccaaagagctgactcc 219  Q
    ||||||| ||||||||   ||||||||| ||||| |||  || ||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||    
T  12481031 ttctaaaaatcaatcatcctccaccaccgcacaatctccagtccaccgaaagaacacctaaaaaagccaaaaaccaaacttgaaccaaagaactgactcc 12480932  T
Q  220 cgatctcgaatcaaaagcgatcggtccacca 250  Q
    |||||||||||||||||||||||| ||||||    
T  12480931 cgatctcgaatcaaaagcgatcggcccacca 12480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 46133214 - 46133347
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaa-ccaaacttgagccaaagagctgactcc 219  Q
    |||||||||||||||| |||| ||||| | ||||||| ||| ||||||| ||||||||||||| |||||||| |||||||||| ||| ||| ||||||||    
T  46133214 tctaaagatcaatcagcttcccccaccacgcaacctccggtccaccgaaggaacaccaaaaaaagcccaaaaaccaaacttgaaccagagaactgactcc 46133313  T
Q  220 cgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||| ||||||||||||||||  ||||||||    
T  46133314 cgatctcaaatcaaaagcgatcggctcaccagac 46133347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 38485698 - 38485568
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 221  Q
    ||||||||||| |||| ||||||||||   ||||||| ||| || |||| |||||||||||||||||||||||||||| || ||| | | ||||||||||    
T  38485698 tctaaagatcattcagcttccaccaccgtgcaacctccggtccatcgaaggaacaccaaaaaagcccaaaaccaaactagaaccagata-ctgactcccg 38485600  T
Q  222 atctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||| |||||| |||||||||    
T  38485599 atctcgaatcaaaagtgatcggcccaccagac 38485568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 250
Target Start/End: Complemental strand, 3478492 - 3478367
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    |||||||| |||| |||| ||||||| | | ||| | | ||||||||||||||||| |||||||||||| || ||||||||||||| || ||||||||||    
T  3478492 aaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaacaccaacaaagcccaaaactaatcttgagccaaagaactaactcccgatc 3478393  T
Q  225 tcgaatcaaaagcgatcggtccacca 250  Q
    |||||||||||| |||||| ||||||    
T  3478392 tcgaatcaaaagtgatcggcccacca 3478367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 6585037 - 6584921
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    |||||| ||||| ||||||| | | |||||||||| ||| |||  ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  6585037 ttccacaacctctcaacctccgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaag 6584938  T
Q  237 cgatcggtccaccagac 253  Q
     |||||| |||||||||    
T  6584937 tgatcggcccaccagac 6584921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 6716678 - 6716805
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    ||||||||||||| |||||||||||| | || || | | ||||||||||| |||| ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  6716678 aaagatcaatcagcttccaccacctctcgacttc-gatccaccgaaagaa-accataaaaaacccaagaccaaacttgagccaaagaactgactcccgat 6716775  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||| |||||| | |||||||    
T  6716776 ctcgaatcaaaagtgatcggccaaccagac 6716805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 22568043 - 22568168
Alignment:
Q  116 cactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttgagccaaagagctg 214  Q
    ||||||||||||||||||||||||| ||||||||| ||||||  ||| | ||||||||||||| |||||| || ||| | |||||||| ||||| | ||     
T  22568043 cactattctaaagatcaatcagttttcaccacctctcaaccttcggtccgccgaaagaacacctaaaaaatccaaaatcaaaacttgaaccaaaaaacta 22568142  T
Q  215 actcccgatctcgaatcaaaagcgat 240  Q
    |||||||||| |||||||||||||||    
T  22568143 actcccgatcacgaatcaaaagcgat 22568168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 34390090 - 34389974
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  34390090 ttccacaacctctcgacctccgatccaccgaaagagcacaaaataaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaag 34389991  T
Q  237 cgatcggtccaccagac 253  Q
     |||||| |||||||||    
T  34389990 tgatcggcccaccagac 34389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 42533194 - 42533321
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||||  |||||| |||||||||||| ||||||| | ||||||||||| |||| |||||||||||| |||||||| ||||||||   |||||||||||    
T  42533194 aaagatcgttcagttgccaccacctcacgacctctgatccaccgaaagaa-accataaaaagcccaaa-ccaaacttaagccaaaggattgactcccgat 42533291  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||| |||| | |||||||||    
T  42533292 ctcgaatcaaaagtgatcagcccaccagac 42533321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 8745293 - 8745166
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    ||||||||  ||| |||||| ||||| | ||||| | | ||||||||||| |||| ||||||||||||||||||||||| |||| || |||| |||||||    
T  8745293 aaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgatccaacgaactgaatcccgat 8745195  T
Q  224 ctcgaatcaaaagcgatcggtccaccaga 252  Q
    ||||||||||||| |||||| ||||||||    
T  8745194 ctcgaatcaaaagtgatcggcccaccaga 8745166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 47325883 - 47325954
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  47325883 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagac 47325954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 41089701 - 41089817
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||| ||||| | |||||||| |||||||||||||||| |||||||||||||||    
T  41089701 ttccacaacctcgcgacctccgatccaccgaaagatcacaaaacaaaagctcaaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaag 41089800  T
Q  237 cgatcggtccaccagac 253  Q
     ||||||||||||||||    
T  41089801 tgatcggtccaccagac 41089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 24324738 - 24324864
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaa-cttgagccaaagagctgactcccga 222  Q
    |||||||| |||| |||||||||| | | ||||| | | |||| |||||| |||| |||||||||||||||||| |||||||||||||  ||||||||||    
T  24324738 aaagatcattcagcttccaccacccctcgacctccgatccacctaaagaa-accataaaaagcccaaaaccaaaacttgagccaaagaattgactcccga 24324836  T
Q  223 tctcgaatcaaaagcgatcggtccacca 250  Q
    |||||||||||||  |||||| ||||||    
T  24324837 tctcgaatcaaaattgatcggcccacca 24324864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 1320925 - 1320806
Alignment:
Q  135 cagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaa-cttgagccaaagagctgactcccgatctcgaatca 232  Q
    ||||| ||||| |||| | ||||| | | ||||||||||| |||| |||||||||||||||||| ||||||||||||| |||||| ||||| | ||||||    
T  1320925 cagttgccaccccctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaaacttgagccaaagaactgacttccgattttgaatca 1320827  T
Q  233 aaagcgatcggtccaccagac 253  Q
    |||| |||||| |||||||||    
T  1320826 aaagtgatcggcccaccagac 1320806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 3419654 - 3419722
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||| | ||||||    
T  3419654 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccacca 3419722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 38306344 - 38306273
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| ||||||||| ||||||||||||||| |||||| |||||||||    
T  38306344 aaagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagac 38306273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 10244265 - 10244195
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccaga 252  Q
    |||| |||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  10244265 aaaggccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga 10244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 23983281 - 23983207
Alignment:
Q  179 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||| ||||||||||||||||||| || ||  ||||||||||||||||||||||| ||||||  |||||||||    
T  23983281 aaaaaaacccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagac 23983207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 35745824 - 35745884
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    |||||||||||| | |||||||||||||||| ||||| |||||||||||||||||| ||||    
T  35745824 aaaagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatc 35745884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 9349832 - 9349761
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| ||||||||| ||  |||  |||||||||||||||||||||||| |||||| |||||||||    
T  9349832 aaagcccaaaatcaaacttgaacctgagaattgactcccgatctcgaatcaaaagtgatcggcccaccagac 9349761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 26386125 - 26386240
Alignment:
Q  134 tcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaa 233  Q
    ||||||||||||||||| || | || ||| || |||||||||||||||  |||| ||| | ||||||||    |||| |  |||||||||||||||||||    
T  26386125 tcagtttccaccacctctcatcatccggtccatcgaaagaacaccaaattagcctaaatcaaaacttgaattgaagaacgaactcccgatctcgaatcaa 26386224  T
Q  234 aagcgatcggtccacc 249  Q
    |||||||||| |||||    
T  26386225 aagcgatcggaccacc 26386240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 3867248 - 3867131
Alignment:
Q  135 cagtttccaccacctcacaacctctggtacaccgaaagaacaccaa--aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatca 232  Q
    |||||||||  ||||| | ||||||| | ||||| |||| ||| ||  |||||||||||| | |||||||| |||||| |||||||||| ||||||||||    
T  3867248 cagtttccataacctcgcgacctctgatccaccgcaagagcacaaagcaaaagcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatca 3867149  T
Q  233 aaagcgatcggtccacca 250  Q
    |||| |||| | ||||||    
T  3867148 aaagtgatcagcccacca 3867131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 16954739 - 16954665
Alignment:
Q  180 aaaaagcccaaaacc-aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||| ||||||||| |||||| ||||||  |||||||||| |||||| |||||||| |||||||    
T  16954739 aaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagac 16954665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 36449210 - 36449113
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaa-aagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    |||||||||||| ||||||| | | ||||||||||| ||||||| ||| |||||||  ||||||| ||||||| ||||||||  ||||||||| ||||    
T  36449210 ttccaccacctctcaacctccgatccaccgaaagaaaaccaaaataagtccaaaacataacttgaaccaaagaactgactcctaatctcgaataaaaa 36449113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 47456841 - 47456909
Alignment:
Q  17 ccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    |||||| ||||| |||||||||||||| | |||||||||||   |||||||| ||||||||||||||||    
T  47456841 ccttcacgaaaccaccactgaaaaaacaaaatccataaccaccaattgccaccactcaacccaaaataa 47456909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 5860286 - 5860353
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacc 249  Q
    ||||||||||| | |||||| | ||||||  |||||||||||||||||||||||||||| || |||||    
T  5860286 aaagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccacc 5860353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 1820013 - 1820071
Alignment:
Q  195 aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||  ||||||  |||||||| |||||||||||||| |||||||||||||||||    
T  1820013 aaacttgaatcaaagatttgactccctatctcgaatcaaaatcgatcggtccaccagac 1820071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 33435178 - 33435132
Alignment:
Q  196 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcg 242  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||    
T  33435178 aacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcg 33435132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 9107319 - 9107234
Alignment:
Q  107 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaa 192  Q
    |||||||||||||||||||||| |||  ||   ||||||||||| |||||||     |||||||||||||| ||||||||||||||    
T  9107319 aagttgagccactattctaaagttcacccaacatccaccacctctcaacctccttcccaccgaaagaacacaaaaaaagcccaaaa 9107234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 27993568 - 27993605
Alignment:
Q  216 ctcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagac 27993605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 37795072 - 37795019
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    ||||||||||| | |||||||  |||||| ||||||||||||||||||||||||    
T  37795072 aaagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaa 37795019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 12546322 - 12546370
Alignment:
Q  99 catcgcctaagttgagccactattctaaagatcaatcagtttccaccac 147  Q
    |||| |||||| ||||||||||||||||||||||||||  |||||||||    
T  12546322 catcacctaagctgagccactattctaaagatcaatcaacttccaccac 12546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 9107401 - 9107355
Alignment:
Q  39 aaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  9107401 aaaacgatatccataaccacccatcgccactactcatcccaaaataa 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 16828931 - 16828993
Alignment:
Q  180 aaaaagcccaaaacc-aaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    ||||||||||||||| ||||||||| |||||| ||||||  |||||||||| |||||| ||||    
T  16828931 aaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatc 16828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 17802837 - 17802890
Alignment:
Q  205 caaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagacgggca 258  Q
    |||| ||||| || |||||||||||||||||| |||||| ||||||||| ||||    
T  17802837 caaaaagctggcttccgatctcgaatcaaaagtgatcggcccaccagaccggca 17802890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 25153265 - 25153232
Alignment:
Q  220 cgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||| ||||||||||||||||    
T  25153265 cgatctcgaatcaaaagtgatcggtccaccagac 25153232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 44353562 - 44353623
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 243  Q
    ||||||||||| | ||| | || |||||| ||||||||||||||| ||||||||| ||||||    
T  44353562 aaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 46262151 - 46262188
Alignment:
Q  216 ctcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagac 46262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 25160867 - 25160827
Alignment:
Q  213 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  25160867 tgacttccgatctcgaatcaaaagtaatcggtccaccagac 25160827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 12296352 - 12296187
Alignment:
Q  88 cactctgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcc 187  Q
    ||||| |||| |||| ||||||||||||||||| |||||||| ||| ||| |||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  12296352 cactccgtcctcatcacctaagttgagccactactctaaagaacaaccagcttccaccaccacacaacctccggtccaccgaaagaacaccaaaaaagcc 12296253  T
Q  188 caaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||||||| ||||||| ||||||   |||||||||||||||||| ||||  ||||||||    
T  12296252 caaaatcaaacttgaaccaaagaactgacttttgatctcgaatcaaaagcgctcggcacaccagac 12296187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 106 - 242
Target Start/End: Complemental strand, 28967026 - 28966890
Alignment:
Q  106 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 205  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| ||  ||||||||||||| |  |||||||||||||||||||||||||    
T  28967026 taagatgagccactattctagagatcaatcagcttccaccacctcacaacctccggaccaccgaaagaacatcctaaaagcccaaaaccaaacttgagcc 28966927  T
Q  206 aaagagctgactcccgatctcgaatcaaaagcgatcg 242  Q
    ||||| ||||||||| |||||||||||||| ||||||    
T  28966926 aaagaactgactcccaatctcgaatcaaaaacgatcg 28966890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 106 - 253
Target Start/End: Complemental strand, 38929986 - 38929839
Alignment:
Q  106 taagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcc 205  Q
    |||||||||  ||||||| ||||||||||||  |||||||||||||||||||| ||  |||||||||||||||| |||||||||||| ||||||||||||    
T  38929986 taagttgagtgactattccaaagatcaatcaacttccaccacctcacaacctccggatcaccgaaagaacaccataaaagcccaaaatcaaacttgagcc 38929887  T
Q  206 aaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| |||||||  |||||||||||||||| |||||| ||| |||||    
T  38929886 aaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagac 38929839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 35800629 - 35800501
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    |||||||| |||| |||||||||| |  |||||| ||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||||| ||||||    
T  35800629 aaagatcattcaggttccaccaccgcgaaacctccggtccaccgaaagaacaccaaaaaagcccaaaaccaaactggaatcaaagaactgacttccgatc 35800530  T
Q  225 tcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||| ||||||||    
T  35800529 tcgaatcaaaagcgatcggttcaccagac 35800501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 21983734 - 21983857
Alignment:
Q  97 cgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaa 196  Q
    |||||| |||||| |||| |||||||||||||||||||||  |||||||||||||||||||| ||  |||||||||||||||| ||||||||| ||| ||    
T  21983734 cgcatcccctaagctgagtcactattctaaagatcaatcaacttccaccacctcacaacctccggaccaccgaaagaacaccataaaagcccataactaa 21983833  T
Q  197 acttgagccaaagagctgactccc 220  Q
    |||||||||||||| |||||||||    
T  21983834 acttgagccaaagaactgactccc 21983857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 140 - 250
Target Start/End: Complemental strand, 16501858 - 16501746
Alignment:
Q  140 tccaccacctcacaacctctggtacaccgaaagaa-cacc-aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagc 237  Q
    ||||||||| ||||| ||| ||| ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  16501858 tccaccaccgcacaatctccggtccaccgaaagaaacacctaaaaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagc 16501759  T
Q  238 gatcggtccacca 250  Q
    |||||| ||||||    
T  16501758 gatcggcccacca 16501746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 46698712 - 46698854
Alignment:
Q  112 gagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagccaaaga 210  Q
    ||||||||||||||||||| |||||| ||||||||| |   ||||||   |  |||||||||||||| ||| ||||||||| |||| ||||| |||||||    
T  46698712 gagccactattctaaagatgaatcagcttccaccacttttaaacctccaatctaccgaaagaacacctaaacagcccaaaaacaaaacttgaaccaaaga 46698811  T
Q  211 gctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
     |||||||||||||||||||||||||| ||||| |||||||||    
T  46698812 actgactcccgatctcgaatcaaaagcaatcggcccaccagac 46698854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 53823362 - 53823490
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    ||||||||||||  |||||||||||| | ||||  | |  |||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||    
T  53823362 aaagatcaatcaacttccaccacctctcgaccttcgatcaaccgaaagaa-accataaaaaacccaaaaccaaacttgagccaaagaactgactcccgat 53823460  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||| ||| ||||||||||||    
T  53823461 ctcgaatcaaaagtgattggtccaccagac 53823490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 25753257 - 25753184
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||    
T  25753257 aaaaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagac 25753184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 41117901 - 41118024
Alignment:
Q  118 ctattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgac 216  Q
    |||||| |||||||| |||| |||||||||||| | ||||||| | || |||||||| |||| ||||||||||||||| || |||||||||||| || ||    
T  41117901 ctattcgaaagatcattcagcttccaccacctctcgacctctgatccatcgaaagaa-accataaaaagcccaaaacctaatttgagccaaagaacttac 41117999  T
Q  217 tcccgatctcgaatcaaaagcgatc 241  Q
    | |||||||||||||||||| ||||    
T  41118000 ttccgatctcgaatcaaaagtgatc 41118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 19673201 - 19673113
Alignment:
Q  164 caccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||| |||||||||| ||||| ||  ||||||||||||    
T  19673201 caccgaaagaacaccaacaaaacccaaaactaaacttgagccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagac 19673113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 22811156 - 22811229
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||  |||||| |||||||||    
T  22811156 aaaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagac 22811229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 19815161 - 19815293
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaac----caaacttgagccaaagagctgactccc 220  Q
    |||||||| | || |||||||| ||| | ||||| ||| |||||||||||||||||  || ||||||||     |||||||||||||||| ||||||||     
T  19815161 aaagatcatttagcttccaccatctctcgacctccggtccaccgaaagaacaccaatcaaacccaaaactaattaaacttgagccaaagaactgactcct 19815260  T
Q  221 gatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||| |||||  |||||||||||||||    
T  19815261 gatctcgaataaaaagtaatcggtccaccagac 19815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 253
Target Start/End: Original strand, 24740054 - 24740172
Alignment:
Q  136 agtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaa-agcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaa 234  Q
    |||||| |||||| ||||||||| | | ||| ||||||||  |||||| |||||||||||||| |||| ||||| | |||||||||||||| |||| | |    
T  24740054 agtttctaccaccgcacaacctccgatccacggaaagaacgacaaaaagagcccaaaaccaaatttgaaccaaataactgactcccgatcttgaattata 24740153  T
Q  235 agcgatcggtccaccagac 253  Q
    ||||||||| |||||||||    
T  24740154 agcgatcggcccaccagac 24740172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 38637174 - 38637301
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||||| |||| |||||||||||| | ||||| | | |||| |||||| |||| ||||||||||||||| | ||| |||||||||  |||||||||||    
T  38637174 aaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaa-accataaaaagcccaaaaccta-cttaagccaaagaattgactcccgat 38637271  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||| |||||| || ||||||    
T  38637272 ctcgaatcaaaagtgatcggcccgccagac 38637301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 39420958 - 39421080
Alignment:
Q  129 atcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcg 227  Q
    |||||||||||||||||||||| | | ||| | | |||||||| || |||| ||||||||||||||||||  ||| | || ||  |||||||||||||||    
T  39420958 atcaatcagtttccaccacctctcgatctccgatccaccgaaaaaa-accataaaaagcccaaaaccaaaactgatctaaggaattgactcccgatctcg 39421056  T
Q  228 aatcaaaagcgatcggtccaccag 251  Q
    ||||||||| |||||| |||||||    
T  39421057 aatcaaaagtgatcggcccaccag 39421080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 6599932 - 6600014
Alignment:
Q  172 gaacaccaaaaa-agcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||| ||| |||||||||| ||||||||  |||||| | ||||||||||||| |||||||||||||||| |||||||||    
T  6599932 gaacaccataaatagcccaaaacaaaacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagac 6600014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 21387159 - 21387273
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcg 238  Q
    ||||| ||| || ||||||| ||| ||| ||| ||||||||||  ||||||||   ||||||||  | |||| |||||| |||||||||||||||||| |    
T  21387159 ttccatcacatctcaacctccggtccactgaacgaacaccaaattagcccaaataaaaacttgaatcgaagaactgacttccgatctcgaatcaaaagtg 21387258  T
Q  239 atcggtccaccagac 253  Q
    |||||||||||||||    
T  21387259 atcggtccaccagac 21387273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 43374031 - 43374120
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaaga 210  Q
    ||||||||||||||||| |||||||||| | ||||||| | | ||| ||||||||||||||||| | | ||| ||||||||| |||||||    
T  43374031 ttctaaagatcaatcagcttccaccaccgcgcaacctccgatccactgaaagaacaccaaaaaacctcgaaatcaaacttgaaccaaaga 43374120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 243
Target Start/End: Complemental strand, 43077126 - 43077000
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttgagccaaag---agctgac 216  Q
    ||||||||||| |||||  |||||||||  ||||| || | |  |||||||||||||| |||||||||||||| ||||||||| ||||||   || ||||    
T  43077126 ttctaaagatcgatcagcctccaccaccgtacaacatccgatcaaccgaaagaacacctaaaaaagcccaaaagcaaacttgaaccaaagaaaagttgac 43077027  T
Q  217 tcccgatctcgaatcaaaagcgatcgg 243  Q
    || ||||||||||| |||| |||||||    
T  43077026 tctcgatctcgaataaaaaacgatcgg 43077000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 8255129 - 8255039
Alignment:
Q  164 caccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||| ||| ||| ||||||||||| | |||||||| |||||| |||||| | ||||||| |||||||| |||||| |||||||||    
T  8255129 caccgaaagagcacaaaacaaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagac 8255039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 8268547 - 8268457
Alignment:
Q  164 caccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||| ||| ||| ||||||||||| | |||||||| |||||| |||||| | ||||||| |||||||| |||||| |||||||||    
T  8268547 caccgaaagagcacaaaacaaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagac 8268457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 38930094 - 38930021
Alignment:
Q  12 aaactccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    |||| |||||| ||||| |||||||||||||| | || |||||||| |||| | ||||||||||||||||||||    
T  38930094 aaaccccttcacgaaaccaccactgaaaaaacaaaattcataaccacacatcgtcactactcaacccaaaataa 38930021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 49747612 - 49747539
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||| ||||||||||||||| | ||||| ||||||| ||||||| ||||||||| ||||||  ||||||||    
T  49747612 aaaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagac 49747539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 2061679 - 2061807
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    |||||||| |||  |||||||||||| | ||||| | | |||||||||||  |   |||||||||||| ||||  ||| ||||||| ||||||| | |||    
T  2061679 aaagatcattcaacttccaccacctctcgacctccgatccaccgaaagaaatcatcaaaagcccaaaatcaaaactgatccaaagaactgactctcaatc 2061778  T
Q  225 tcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| |||| | |||||||||    
T  2061779 tcgaatcaaaagtgatcagcccaccagac 2061807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 4305808 - 4305737
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||| |||| | |||||||| |||||| || |||||||||||||||||||||| |||||  |||||||||    
T  4305808 aaagcctaaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagac 4305737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 35341335 - 35341390
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    ||||| |||||| | |||||||||||||||||||||| ||||||||| ||||||||    
T  35341335 aaaaggccaaaaaccaacttgagccaaagagctgacttccgatctcggatcaaaag 35341390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 21983654 - 21983708
Alignment:
Q  31 ccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    |||| |||||||| | |||||||||||  ||||||||||||||||||||||||||    
T  21983654 ccacggaaaaaacaaaatccataaccacccattgccactactcaacccaaaataa 21983708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 12296426 - 12296370
Alignment:
Q  28 cgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    |||||||||||||| |||||||||||||||  ||| ||||||||||| ||||||||||    
T  12296426 cgaccactgaaaaa-cgatatccataaccacccatcgccactactcatcccaaaataa 12296370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 2825867 - 2825799
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacc 249  Q
    |||||||||||| | |  ||||||||||||| ||| |||||||||||||||||||  |||||| |||||    
T  2825867 aaaagcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccacc 2825799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 31050659 - 31050731
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| | ||||  | ||||||| || ||| |||||||||||||||||| |||||| |||||||||    
T  31050659 aaaagcccaaaaaccaactcaaaccaaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagac 31050731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 46487536 - 46487465
Alignment:
Q  14 actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataaa 86  Q
    ||||||||| ||| |||||||||||||| |||||| |||||||| | || ||||||||||| || ||||||||    
T  46487536 actccttcatgaagcgaccactgaaaaa-cgatattcataaccacatatcgccactactcatcctaaaataaa 46487465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 48098418 - 48098362
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    ||||||||||||||||||||| | ||||  | |||||||||||||||||| ||||||    
T  48098418 aaaaagcccaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaag 48098362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 21988007 - 21988045
Alignment:
Q  247 accagacgggcacccctta-ccccggtccaccagagaat 284  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  21988007 accagacgggcaccccttacccccggtccaccagagaat 21988045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 30167576 - 30167622
Alignment:
Q  196 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcg 242  Q
    |||||||| |||||| | ||||||||||||||||||||||| |||||    
T  30167576 aacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcg 30167622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 30964520 - 30964454
Alignment:
Q  186 cccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccaga 252  Q
    ||||||| | |||||||| |||||| | ||||||||||| ||||||||||| |||||| ||| ||||    
T  30964520 cccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcaga 30964454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 38929827 - 38929789
Alignment:
Q  247 accagacgggcacccctta-ccccggtccaccagagaat 284  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38929827 accagacgggcaccccttacccccggtccaccagagaat 38929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 16833017 - 16833078
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    |||||||||||| |||||||||| ||||  |  ||||| |||||||||||||||||| ||||    
T  16833017 aaaaagcccaaatccaaacttgatccaacaaaatgacttccgatctcgaatcaaaagtgatc 16833078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 36962628 - 36962684
Alignment:
Q  196 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||| |||||| |||||||| ||||||||||||||||  ||||| |||||||||    
T  36962628 aacttgagtcaaaga-ctgactcctgatctcgaatcaaaagtaatcggcccaccagac 36962684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 39041302 - 39041343
Alignment:
Q  212 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||| |||||||||||||||| |||||| |||||||||    
T  39041302 ctgactcctgatctcgaatcaaaagtgatcggcccaccagac 39041343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 40813813 - 40813850
Alignment:
Q  216 ctcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccaccagac 40813850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 6e-40; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 98 - 249
Target Start/End: Complemental strand, 47945873 - 47945722
Alignment:
Q  98 gcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa 197  Q
    ||||| |||||  ||||||||||||| |||||||||| |  |||||||||||||||| ||| ||  |||||||||||||||| |||||||||||| ||||    
T  47945873 gcatcccctaaactgagccactattcaaaagatcaattaacttccaccacctcacaatctccggaccaccgaaagaacaccataaaagcccaaaatcaaa 47945774  T
Q  198 cttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacc 249  Q
    ||||||||||| | ||||||||||||||||||||||||| |||||| |||||    
T  47945773 cttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccacc 47945722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 115 - 253
Target Start/End: Complemental strand, 5556721 - 5556582
Alignment:
Q  115 ccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagccaaagagct 213  Q
    ||||| ||||||||||||| |||  |||||||||||  |||||| ||| |||||||||||||||  ||||||||||||||||| ||||| ||||||| ||    
T  5556721 ccacttttctaaagatcaaccagcctccaccacctctaaacctccggtccaccgaaagaacacctgaaaagcccaaaaccaaaacttgaaccaaagaact 5556622  T
Q  214 gactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  5556621 gactcccgatctcgaatcaaaagcgatcgccccaccagac 5556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 1652823 - 1652950
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactccc 220  Q
    |||||||||||| |||  |||| ||||| |  |||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| || |||||     
T  1652823 ttctaaagatcattcaacttccgccaccgcttaacctccggtccaccgaaagaacaccaaaaaagcccaaaaccaaacttgaaccaaagaactaactcct 1652922  T
Q  221 gatctcgaatcaaaagcgatcggtccac 248  Q
    |||||||||||||||| |||||| ||||    
T  1652923 gatctcgaatcaaaagtgatcggcccac 1652950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 27399102 - 27398970
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaa-gcccaaaaccaaacttgagccaaagagctgactccc 220  Q
    ||||||||||| ||||   |||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||| ||||| | ||||||||     
T  27399102 tctaaagatcattcagcaaccaccacctctcaacctctggtccaccaaaagaacaccaaaaaaagcccaaaaccaaacttgaaccaaataactgactcct 27399003  T
Q  221 gatctcgaatcaaaagcgatcggtccaccagac 253  Q
    || |||||||| |||||||| |  |||||||||    
T  27399002 gacctcgaatctaaagcgattgtgccaccagac 27398970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 253
Target Start/End: Original strand, 33143891 - 33144018
Alignment:
Q  127 agatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaa-cttgagccaaagagctgactcccgatc 224  Q
    ||||||||||| |||||||||||| | ||||||| | ||||||||||| |||| ||||||||||||| | || ||||| ||||||| |||||||||||||    
T  33143891 agatcaatcagcttccaccacctcgcgacctctgatccaccgaaagaa-accataaaaagcccaaaaactaatcttgatccaaagaactgactcccgatc 33143989  T
Q  225 tcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| ||||| ||||||||||    
T  33143990 tcgaatcaaaagtgatcgatccaccagac 33144018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 823375 - 823494
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaa-aagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||||| |||| |||| ||||||| |||||||||||  |||||||||||||||||| ||||||||||| ||||||||   ||| | ||||||| ||||    
T  823375 aaagatcattcagcttccgccacctctcaacctctggtctaccgaaagaacaccaaaataagcccaaaacaaaacttgaatgaaacaactgactctcgat 823474  T
Q  224 ctcgaatcaaaagcgatcgg 243  Q
    ||||||||||||| ||||||    
T  823475 ctcgaatcaaaagtgatcgg 823494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 250
Target Start/End: Original strand, 30935326 - 30935456
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaa-caccaaaaaagcccaaaaccaaacttgagccaaagagctgactcc 219  Q
    |||||||||||| |||| |||||||||| |  || ||| ||| | | ||||||| |||||||||||| ||||||||||||||| ||||| | || |||||    
T  30935326 ttctaaagatcattcagcttccaccaccgcgtaatctccggtccgctgaaagaaacaccaaaaaagctcaaaaccaaacttgaaccaaataactaactcc 30935425  T
Q  220 cgatctcgaatcaaaagcgatcggtccacca 250  Q
    |||||| ||||||||||||||| | ||||||    
T  30935426 cgatcttgaatcaaaagcgatcagcccacca 30935456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 43012503 - 43012387
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    |||||| ||||| | ||||||| | |||||||||| ||| |||  ||||| ||||| | |||||||| |||||| |||||||||||||||||||||||||    
T  43012503 ttccacaacctcgcgacctctgattcaccgaaagagcacaaaacaaaagctcaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaag 43012404  T
Q  237 cgatcggtccaccagac 253  Q
     |||||| |||||||||    
T  43012403 tgatcgggccaccagac 43012387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 19176586 - 19176514
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  19176586 aaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 19176514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 25594454 - 25594577
Alignment:
Q  107 aagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagcca 206  Q
    ||||||||||||||||||||||||||||| | ||||||||| ||||           ||| |||||||||||||||||||||||| |||| ||||| |||    
T  25594454 aagttgagccactattctaaagatcaatccgcttccaccacatcac-----------cactgaaagaacaccaaaaaagcccaaagccaatcttgaacca 25594542  T
Q  207 aagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    ||||  | ||| ||||||| |||||||||||||||    
T  25594543 aagaattaacttccgatctagaatcaaaagcgatc 25594577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 17551040 - 17550969
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  17551040 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 17550969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 9584013 - 9584122
Alignment:
Q  146 acctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 243  Q
    ||||| ||||||| | | |||||||||| ||| |||  ||||||||||| | | |||||| |||||| ||||||||||||||||||||||||| |||||     
T  9584013 acctcgcaacctccgatccaccgaaagatcacaaaacaaaagcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcga 9584112  T
Q  244 tccaccagac 253  Q
    ||||||||||    
T  9584113 tccaccagac 9584122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 23328303 - 23328416
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    |||||| ||||| | ||||| | | |||||||||| ||| |||  ||||| ||||| | ||||||||||||| |||| ||||||||||||||||||||||    
T  23328303 ttccacaacctctcgacctccgatccaccgaaagagcacaaaacaaaagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaag 23328402  T
Q  237 cgatcggtccacca 250  Q
     |||||||||||||    
T  23328403 tgatcggtccacca 23328416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 37123467 - 37123397
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 250  Q
    |||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| ||||||    
T  37123467 aaaaagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaaagtgatcggcccacca 37123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 39021273 - 39021342
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||| |||||| ||||||    
T  39021273 aaaagcccaaaaccagacttgatccaaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 40023541 - 40023641
Alignment:
Q  155 cctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccaga 252  Q
    |||||| | |||||||||| ||| |||  ||||||||||| | ||||| |||||||||   ||||||||||||||||||||||| |||||||||||||||    
T  40023541 cctctgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccaga 40023640  T
Q  253 c 253  Q
    |    
T  40023641 c 40023641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 14194027 - 14193952
Alignment:
Q  180 aaaaagcccaaaaccaaa--cttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||  ||||||||||||| | ||||||| ||||||||||||||| ||||||||| ||||||    
T  14194027 aaaaagcccaaaaccaaaaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagac 14193952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 45398880 - 45398808
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| | ||||| |  |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  45398880 aaaagcccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagac 45398808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 14879576 - 14879447
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaa-cttgagccaaagagctgactcccga 222  Q
    |||||||| | || |||||||||||| | |||||   | ||||||||||| |||| |||||| ||||||||||| ||||| |||| || | |||||||||    
T  14879576 aaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaa-accataaaaagtccaaaaccaaaacttgatccaacgaacagactcccga 14879478  T
Q  223 tctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||| |||||| |||||||||    
T  14879477 tctcgaatcaaaagtgatcggcccaccagac 14879447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 38488940 - 38488835
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcc 219  Q
    ||||||||||||| |||  ||||| |||   ||||||| ||| ||||||||||||||| || |||||||||||||||||||||  |||||  ||||||||    
T  38488940 ttctaaagatcaaccagcctccacaaccgtgcaacctccggtccaccgaaagaacacctaacaaagcccaaaaccaaacttgaaacaaagcactgactcc 38488841  T
Q  220 cgatct 225  Q
    ||||||    
T  38488840 cgatct 38488835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 2392504 - 2392573
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccag 251  Q
    ||||||||||| | ||||| || |||||| |||||| || ||||||||||||||| ||||||||||||||    
T  2392504 aaagcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccag 2392573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 25594347 - 25594417
Alignment:
Q  14 actccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    |||||||||  ||||||||||||||||||||||||||| |||||  ||| ||||||||||| ||||| ||||    
T  25594347 actccttcacaaaacgaccactgaaaaaacgatatcca-aaccacccatcgccactactcatcccaagataa 25594417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 30127333 - 30127274
Alignment:
Q  195 aaacttgagccaa-agagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||  ||||||||    
T  30127333 aaacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggctcaccagac 30127274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 14755260 - 14755334
Alignment:
Q  180 aaaaagcccaaaaccaaacttgag-ccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| |||| || ||  ||||||| |||||||||||||| |||||||||| |||||| |||||||||    
T  14755260 aaaaagcccaaatccaacctcgaaaccaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagac 14755334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 2394255 - 2394320
Alignment:
Q  186 cccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccag 251  Q
    ||||||| | ||||| || |||||| |||||| || ||||||||||||||| ||||||||||||||    
T  2394255 cccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccag 2394320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 20611866 - 20611813
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaa 235  Q
    ||||||||||| | ||||| || |||||| ||||||||||||||||||||||||    
T  20611866 aaagcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaa 20611813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 46358315 - 46358428
Alignment:
Q  113 agccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagc 212  Q
    ||||| |||||  ||||||||| || |||||||||||| |||||||   | ||| ||||||||| ||||| |||||||| |||||||| | | |||||      
T  46358315 agccattattcccaagatcaataagcttccaccacctctcaacctccaatccactgaaagaacatcaaaacagcccaaagccaaacttaaactaaagaag 46358414  T
Q  213 tgactcccgatctc 226  Q
    |||||||| |||||    
T  46358415 tgactccccatctc 46358428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 34475783 - 34475823
Alignment:
Q  213 tgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  34475783 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 34475823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 20710740 - 20710777
Alignment:
Q  216 ctcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagac 20710777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 31424289 - 31424248
Alignment:
Q  212 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||||||||| ||| | |||||||    
T  31424289 ctgactcccgatctcgaatcaaaagcgaccggcctaccagac 31424248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 253
Target Start/End: Complemental strand, 15906872 - 15906698
Alignment:
Q  80 aaataaatcactctgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaa-cacc 178  Q
    ||||||| ||| |||||| |||| |||||||||||| ||||||||| | ||||||||  ||||||||||||  |||||||||| ||| ||||||| |||     
T  15906872 aaataaaacacactgtcctcatcacctaagttgagctactattctataaatcaatcatcttccaccacctcttaacctctggtccactgaaagaaacact 15906773  T
Q  179 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||| | |||||| |||||||||    
T  15906772 aaatcagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagac 15906698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 250
Target Start/End: Original strand, 17720610 - 17720771
Alignment:
Q  88 cactctgtccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcc 187  Q
    ||||| |||| |||| | ||| |||||||||||||||||||||||||||  |||||||||||| |||||||  || ||||||||||||||||||| ||||    
T  17720610 cactccgtcctcatcacttaatttgagccactattctaaagatcaatcaacttccaccacctctcaacctcaagtccaccgaaagaacaccaaaacagcc 17720709  T
Q  188 caaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||| || |||| ||||||| ||||||||||||| |||||||||||||||| | ||||||    
T  17720710 caaaacctaaattgaaccaaagaactgactcccgatc-cgaatcaaaagcgatcagcccacca 17720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 253
Target Start/End: Original strand, 30236064 - 30236197
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaa-aagcccaaaaccaaacttgagccaaagagctgactcc 219  Q
    ||||||||||||||||| |||||||||  | ||| ||||||| |||||| | |||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  30236064 ttctaaagatcaatcagcttccaccactgcgcaatctctggtccaccgatacaacaccaaaaaaagcccaaaaccaaacttgaaccaaagaactgactcc 30236163  T
Q  220 cgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||||  |||||||||    
T  30236164 cgatctcgaatcaaaagcgatcgtcccaccagac 30236197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 35062600 - 35062469
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 221  Q
    ||||||||||| |||  |||||||||| | ||||||||| | ||||||| ||||||| |||||||||||||||||||| || | | ||| ||||||| ||    
T  35062600 tctaaagatcattcaccttccaccaccgcgcaacctctgatccaccgaaggaacacctaaaaagcccaaaaccaaactagaacaagagaactgactctcg 35062501  T
Q  222 atctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||| ||||||| |||||||||    
T  35062500 atctcgaatcaaaatcgatcggcccaccagac 35062469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 17656943 - 17657060
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||||| |||| |||||||||||  | ||||| | | ||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  17656943 aaagatcattcagcttccaccacctatcgacctccgatccaccgaaagaa-accataaaaagtccaaaaccaaacttgagccaaagaactgactcccgat 17657041  T
Q  224 ctcgaatcaaaagcgatcg 242  Q
    ||||||||||||| |||||    
T  17657042 ctcgaatcaaaagtgatcg 17657060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 41791209 - 41791322
Alignment:
Q  129 atcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcga 228  Q
    ||||||| | |||||||||| | |||||||| || || ||||| ||||||||||||| ||||||| |||||||| |||||||  |||||| |||||||||    
T  41791209 atcaatccgcttccaccaccgcgcaacctctagtccatcgaaataacaccaaaaaagtccaaaactaaacttgaaccaaagaagtgactctcgatctcga 41791308  T
Q  229 atcaaaagcgatcg 242  Q
    ||||||||||||||    
T  41791309 atcaaaagcgatcg 41791322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 10552410 - 10552280
Alignment:
Q  122 tctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccg 221  Q
    ||||||||||| |||| |||||||||  | ||||||| ||| | |||||  |||||| ||||||| |||||||||||| || ||| ||| ||||||||||    
T  10552410 tctaaagatcattcagcttccaccacaacgcaacctc-ggtcccccgaagtaacacctaaaaagcacaaaaccaaactagaaccagagaactgactcccg 10552312  T
Q  222 atctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||| ||||||||||||||||| |||||||||    
T  10552311 atctagaatcaaaagcgatcggcccaccagac 10552280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 10248494 - 10248619
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    ||||||||||||| |||||||||||| |  |||| | | |||| |||||| |||| | |||||  |||||||||||||||||||||| ||||||||||||    
T  10248494 aaagatcaatcagcttccaccacctcgcggcctccgatccaccaaaagaa-accatataaagcaaaaaaccaaacttgagccaaagaactgactcccgat 10248592  T
Q  224 ctcgaatcaaaagcgatcggtccacca 250  Q
    || |||||||||| |||||||||||||    
T  10248593 cttgaatcaaaagtgatcggtccacca 10248619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 32945683 - 32945760
Alignment:
Q  164 caccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||| ||||    
T  32945683 caccgaaagaacatcaaaaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatc 32945760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 24995393 - 24995464
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  24995393 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 24995464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 32066256 - 32066364
Alignment:
Q  146 acctcacaacctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggt 244  Q
    ||||| |||||||||   |||||||||| ||| | | ||||||||||| | |||| ||| ||||||||||||||||||| |||||||||||| ||||||     
T  32066256 acctcgcaacctctgaaccaccgaaagagcacaacacaaagcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggc 32066355  T
Q  245 ccaccagac 253  Q
    |||||||||    
T  32066356 ccaccagac 32066364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 15821330 - 15821448
Alignment:
Q  137 gtttccaccacctcacaacctctggtacaccgaaagaacaccaaa--aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaa 234  Q
    |||||||| ||||| | ||||||| | ||| |||||| ||| |||  ||||||||||| | ||| | || ||||||||||||||||||||||||||||||    
T  15821330 gtttccacaacctctcgacctctgatccactgaaagagcacaaaacaaaagcccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaa 15821429  T
Q  235 agcgatcggtccaccagac 253  Q
    || |||| | |||||||||    
T  15821430 agtgatcagcccaccagac 15821448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 31207364 - 31207431
Alignment:
Q  186 cccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||| | |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  31207364 cccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 31207431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 12198064 - 12198138
Alignment:
Q  179 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||| ||||||||||||||||||||||| ||||||||| || |  ||| ||||| ||||||||||||||||    
T  12198064 aaaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagac 12198138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 12442492 - 12442566
Alignment:
Q  179 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||| ||||||||||||||||||||||| ||||||||| || |  ||| ||||| ||||||||||||||||    
T  12442492 aaaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagac 12442566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 36630921 - 36630849
Alignment:
Q  181 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| |||||| ||| |||||| ||||| ||||||||||||| ||||| |||||| |||||||||    
T  36630921 aaaagcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagac 36630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 9519582 - 9519511
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||  |||||| |||| ||||    
T  9519582 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagac 9519511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 34389003 - 34389074
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | |||||||| |||||| |||||||  |||||||||||||||| |||||| |||||||||    
T  34389003 aaagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagac 34389074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 16457459 - 16457520
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 243  Q
    |||||| |||| | |||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  16457459 aaagcctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg 16457520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 37986856 - 37986927
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||| | |||||||| |||||| ||||||||||||||||||||||||  ||| || |||||||||    
T  37986856 aaagcacaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagac 37986927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 41893399 - 41893469
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||| | | || |||||||||    
T  41893399 aaagcccaaaaacaa-cttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagac 41893469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 15906949 - 15906882
Alignment:
Q  17 ccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 85  Q
    |||||| ||||||||||||||||||  | |||||||||||| |  ||||||||||||| ||||||||||    
T  15906949 ccttcacgaaacgaccactgaaaaacag-tatccataaccacatgttgccactactcatcccaaaataa 15906882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 20138509 - 20138448
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcgg 243  Q
    ||||||||||| | ||| | || |||||| ||||||||||||||| ||||||||| ||||||    
T  20138509 aaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 6727 - 6570
Alignment:
Q  96 ccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacca 195  Q
    ||||||| |||||||||||||||||||||||||| ||||||  ||||||| || |||||||||| |  |||||||||||||| ||||||||| |||||||    
T  6727 ccgcatcccctaagttgagccactattctaaagaccaatcatcttccacctccacacaacctctagaccaccgaaagaacacaaaaaaagccaaaaacca 6628  T
Q  196 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||| || ||| || |||| |||||||||| ||||| | ||||||||    
T  6627 aacttgagccaaagaactaactaccaatcttgaatcaaaagagatcgttgcaccagac 6570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 253
Target Start/End: Complemental strand, 9224186 - 9224053
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaa-aaaagcccaaaaccaaacttgagccaaagagctgactcc 219  Q
    |||||||||||| |||| |||||||||| ||||||||| ||| |||||||||| |||||| |||||||||||||||||  ||| ||||||| ||||||||    
T  9224186 ttctaaagatcattcagcttccaccaccgcacaacctccggtgcaccgaaagagcaccaataaaagcccaaaaccaaaactgaaccaaagaactgactcc 9224087  T
Q  220 cgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||||||| | |||||||||    
T  9224086 cgatctcgaatcaaaagcgatcagcccaccagac 9224053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 242
Target Start/End: Original strand, 13098483 - 13098629
Alignment:
Q  96 ccgcatcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaacca 195  Q
    ||||||| |||||| ||||||||||||||||||||||||||  ||||||| || |||||||||  |  |||||||||||||| ||||||||| |||||||    
T  13098483 ccgcatcccctaagctgagccactattctaaagatcaatcatcttccacctccacacaacctccagaccaccgaaagaacacaaaaaaagccaaaaacca 13098582  T
Q  196 aacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcg 242  Q
    ||||||||||||||| || |||||| |||| |||||| ||| |||||    
T  13098583 aacttgagccaaagaactaactcccaatcttgaatcagaagagatcg 13098629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 253
Target Start/End: Original strand, 26534652 - 26534788
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacc-aaaaaagcccaaaaccaaacttgagcca---aagagctgac 216  Q
    ||||||||||||||||| |||||||||| ||||||||  ||| ||||||||||||||| |||||||||||||||||||||||| |||   |||| |||||    
T  26534652 ttctaaagatcaatcagcttccaccaccgcacaaccttcggtccaccgaaagaacacctaaaaaagcccaaaaccaaacttgaaccaaagaagaactgac 26534751  T
Q  217 tcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||| ||||||||||||||| |||||| |||||||||    
T  26534752 tcccaatctcgaatcaaaagtgatcggcccaccagac 26534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 26215960 - 26216088
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    ||||||||||||| |||||||||| | ||| ||| ||| |||| |||||||||||||||||||||||||||||  ||| || |||| |||||||||||||    
T  26215960 aaagatcaatcagcttccaccaccgcgcaatctccggtccaccaaaagaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatc 26216059  T
Q  225 tcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||| |||||| |||||||||    
T  26216060 tcgaatcaaaagtgatcggcccaccagac 26216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 251
Target Start/End: Complemental strand, 21266257 - 21266127
Alignment:
Q  121 ttctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactccc 220  Q
    |||| ||||||||| ||  ||||||||| ||||| ||||||| |||| |||||||||||| ||||||||||||||||||||| ||| | | || ||||||    
T  21266257 ttctgaagatcaattagcctccaccaccgcacaatctctggtccaccaaaagaacaccaacaaagcccaaaaccaaacttgaaccacataactaactccc 21266158  T
Q  221 gatctcgaatcaaaagcgatcggtccaccag 251  Q
    ||||||||||||||||||||||| |||||||    
T  21266157 gatctcgaatcaaaagcgatcggcccaccag 21266127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 32935280 - 32935408
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatc 224  Q
    ||||||||  ||| |||||||||||| |||||| ||   |||||||||||||| ||||||| |||||| |||||||||| | |||| |||||||||||||    
T  32935280 aaagatcatgcagcttccaccacctcccaacctttgaaccaccgaaagaacactaaaaaagtccaaaatcaaacttgagtccaagaactgactcccgatc 32935379  T
Q  225 tcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||| |||||||||    
T  32935380 tcgaatcaaaagcgatcggcccaccagac 32935408  T

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Target: chr6; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 33968531 - 33968670
Alignment:
Q  100 atcgcctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaact 199  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||| ||||||  ||| |  | ||||||||  |||||| || ||| | |||||    
T  33968531 atcgccaaagttgagccactattctaaagatcaatcagcttccaccatctctcaaccttcggtccgtcaaaagaaca--aaaaaatccaaaatcaaaact 33968628  T
Q  200 tgagccaaagagctgactcccgatctcgaatcaaaagcgatc 241  Q
    ||| ||||||| ||||||||||||||||||||||||||||||    
T  33968629 tgaaccaaagaactgactcccgatctcgaatcaaaagcgatc 33968670  T

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Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 13423606 - 13423482
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaa-aaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    ||||||||||||| |||||||||||| |  |||| ||| || |||||||| |||| | |||||||| |||||||||||||||||||| | ||||| ||||    
T  13423606 aaagatcaatcagcttccaccacctcgcggcctccggtccatcgaaagaa-accatataaagcccataaccaaacttgagccaaagaaccgactctcgat 13423508  T
Q  224 ctcgaatcaaaagcgatcggtccacc 249  Q
    ||||||||||||| ||||||||||||    
T  13423507 ctcgaatcaaaagtgatcggtccacc 13423482  T

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Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 20701744 - 20701862
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||||| |||| |||||| ||||| | ||||| | | ||||||||||| |||| ||||||||||||||||||||| ||||||||| || |||||||||    
T  20701744 aaagatcattcagcttccactacctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttaagccaaagaactaactcccgat 20701842  T
Q  224 ctcgaatcaaaagcgatcgg 243  Q
    ||||||||||||| ||||||    
T  20701843 ctcgaatcaaaagtgatcgg 20701862  T

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Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 21265111 - 21265003
Alignment:
Q  140 tccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcga 239  Q
    ||||||||| ||||| ||| ||| || | |||||||||||| ||||||||||||||||||||| ||| | | || ||||||||||||||||||||||| |    
T  21265111 tccaccaccgcacaatctccggtccatcaaaagaacaccaacaaagcccaaaaccaaacttgaaccagataactaactcccgatctcgaatcaaaagcta 21265012  T
Q  240 tcggtccac 248  Q
    |||| ||||    
T  21265011 tcggcccac 21265003  T

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Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 3117576 - 3117508
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||| | |||||||| |||||| |||||||||||||| |||||||||| |||||| ||||||    
T  3117576 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccacca 3117508  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 243
Target Start/End: Complemental strand, 15944178 - 15944041
Alignment:
Q  105 ctaagttgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagccc-aaaaccaaacttgag 203  Q
    |||||||||||||||| ||  |||||||| ||  |||| |||||||| ||||||||||  ||| |||||| ||| ||||||||| |||| |||  ||||     
T  15944178 ctaagttgagccactactc--aagatcaaacaacttcctccacctcaaaacctctggtcaaccaaaagaaaacctaaaaagcccaaaaaacaagattgaa 15944081  T
Q  204 ccaaagagctgactcccgatctcgaatcaaaagcgatcgg 243  Q
    |||| || |||||||| || ||| ||||||||| ||||||    
T  15944080 ccaaggaactgactccagaactctaatcaaaagtgatcgg 15944041  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 15120538 - 15120623
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaaga 210  Q
    ||||||||| ||| |||||||||||| | ||||| | | |||| |||||| |||| |||||||||||||| ||||||||||||||||    
T  15120538 aaagatcaaccagcttccaccacctctcgacctccgatccaccaaaagaa-accataaaaagcccaaaactaaacttgagccaaaga 15120623  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 250
Target Start/End: Complemental strand, 20499965 - 20499934
Alignment:
Q  219 ccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||||||||||||||||||||||||    
T  20499965 ccgatctcgaatcaaaagcgatcggtccacca 20499934  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 7546464 - 7546498
Alignment:
Q  219 ccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    |||||||||||||||||| ||||||||||||||||    
T  7546464 ccgatctcgaatcaaaagtgatcggtccaccagac 7546498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 250
Target Start/End: Complemental strand, 34105466 - 34105428
Alignment:
Q  212 ctgactcccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  34105466 ctgactcccgatctcgaatcaaaagtgatcggcccacca 34105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 12794201 - 12794144
Alignment:
Q  179 aaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    ||||||||| ||||| |||||||  || |||| |||||||| ||||||||||||||||    
T  12794201 aaaaaagccaaaaactaaacttggacccaagaactgactcctgatctcgaatcaaaag 12794144  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 16180837 - 16180873
Alignment:
Q  119 tattctaaagatcaatcagtttccaccacctcacaac 155  Q
    |||| |||||||||||||| |||||||||||||||||    
T  16180837 tattttaaagatcaatcagcttccaccacctcacaac 16180873  T

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Target: scaffold1613 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 253
Target Start/End: Original strand, 943 - 1086
Alignment:
Q  111 tgagccactattctaaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaa-cttgagccaaag 209  Q
    ||||||||||||||||||||||||||  ||||||||| ||  || ||| | | || ||| ||||||| |||||| | |||||||||| ||| | ||||||    
T  943 tgagccactattctaaagatcaatcatcttccaccacttcttaatctccgattcatcgagagaacactaaaaaacctcaaaaccaaaacttaaaccaaag 1042  T
Q  210 agctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    | |||||||||||||||||||||||||||||||| |||||||||    
T  1043 aactgactcccgatctcgaatcaaaagcgatcggcccaccagac 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 19523 - 19395
Alignment:
Q  125 aaagatcaatcagtttccaccacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 223  Q
    |||||| | |||| |||||||| ||| | ||||| | | ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  19523 aaagattattcagcttccaccaactctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgagccaaagaactgacttccgat 19425  T
Q  224 ctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||| |||||| |||||||||    
T  19424 ctcgaatcaaaagtgatcggcccaccagac 19395  T

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Target: scaffold0119 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 42134 - 42207
Alignment:
Q  180 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  42134 aaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 42207  T

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Target: scaffold0063 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 58228 - 58142
Alignment:
Q  164 caccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccacca 250  Q
    ||||||||||| |||| |||||||| |||||||||||||| ||||| |  ||||| ||||||| |||||||||| |||||| ||||||    
T  58228 caccgaaagaa-accataaaaagcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccacca 58142  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 36835 - 36731
Alignment:
Q  139 ttccaccacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaac--ttgagccaaagagctgactcccgatctcgaatcaaaag 236  Q
    ||||||||| || | ||||| | | |||||||||||  |  |||||| |||||||||||   ||||| |||||| |||||||||||||||||||||||||    
T  36835 ttccaccacatctcgacctccgatccaccgaaagaaatcataaaaagaccaaaaccaaaaagttgagacaaagaactgactcccgatctcgaatcaaaag 36736  T
Q  237 cgatc 241  Q
     ||||    
T  36735 tgatc 36731  T

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Target: scaffold0068 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 35770 - 35840
Alignment:
Q  182 aaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||| | ||||| || ||||||  |||||||||||||||||||||||| |||||| |||| ||||    
T  35770 aaagcccaaaaaccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagac 35840  T

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Target: scaffold0620 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 3883 - 3842
Alignment:
Q  212 ctgactcccgatctcgaatcaaaagcgatcggtccaccagac 253  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  3883 ctgactcccgatctcgaatcaaaattgatcggcccaccagac 3842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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