View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17215_low_13 (Length: 494)

Name: NF17215_low_13
Description: NF17215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17215_low_13
NF17215_low_13
[»] chr6 (39 HSPs)
chr6 (119-236)||(13035998-13036116)
chr6 (114-237)||(5253212-5253336)
chr6 (114-238)||(6606086-6606211)
chr6 (114-238)||(21898644-21898769)
chr6 (111-236)||(14107344-14107470)
chr6 (114-238)||(10311458-10311583)
chr6 (114-234)||(29333128-29333248)
chr6 (114-237)||(29444754-29444878)
chr6 (114-238)||(12635810-12635935)
chr6 (114-236)||(3601082-3601205)
chr6 (109-238)||(19089494-19089624)
chr6 (114-238)||(3587934-3588059)
chr6 (114-238)||(8932657-8932782)
chr6 (114-238)||(8944123-8944248)
chr6 (119-235)||(34954613-34954730)
chr6 (123-237)||(8611972-8612087)
chr6 (119-238)||(8938707-8938827)
chr6 (114-208)||(9633614-9633708)
chr6 (153-238)||(12606426-12606512)
chr6 (113-238)||(13468929-13469055)
chr6 (135-236)||(2271313-2271413)
chr6 (114-199)||(14783409-14783494)
chr6 (114-211)||(31129201-31129298)
chr6 (144-234)||(9179755-9179846)
chr6 (135-210)||(32157177-32157252)
chr6 (114-226)||(5029825-5029938)
chr6 (157-238)||(5333001-5333082)
chr6 (141-237)||(11142600-11142697)
chr6 (142-234)||(19230576-19230668)
chr6 (114-238)||(30788842-30788965)
chr6 (153-212)||(8888905-8888964)
chr6 (157-235)||(9147300-9147379)
chr6 (158-232)||(13391289-13391363)
chr6 (153-234)||(15643862-15643939)
chr6 (174-232)||(24671915-24671974)
chr6 (161-231)||(33859355-33859426)
chr6 (170-212)||(21945312-21945354)
chr6 (125-234)||(8149797-8149906)
chr6 (119-235)||(9366418-9366534)
[»] chr7 (59 HSPs)
chr7 (114-238)||(48804678-48804803)
chr7 (114-238)||(10047865-10047990)
chr7 (123-238)||(4195200-4195316)
chr7 (114-235)||(36619243-36619365)
chr7 (114-237)||(38578856-38578980)
chr7 (114-236)||(17748371-17748494)
chr7 (114-236)||(22973964-22974087)
chr7 (114-237)||(13095854-13095978)
chr7 (114-237)||(34659222-34659346)
chr7 (114-238)||(21190769-21190894)
chr7 (114-237)||(10317735-10317858)
chr7 (114-237)||(43925508-43925632)
chr7 (123-237)||(47341872-47341987)
chr7 (110-234)||(14535290-14535414)
chr7 (114-237)||(5069804-5069928)
chr7 (126-237)||(18785665-18785777)
chr7 (124-231)||(27028281-27028389)
chr7 (114-238)||(45697179-45697303)
chr7 (153-235)||(27875116-27875199)
chr7 (124-234)||(3353424-3353534)
chr7 (154-235)||(22573811-22573892)
chr7 (159-235)||(43862006-43862083)
chr7 (114-237)||(1605937-1606061)
chr7 (114-237)||(16802119-16802243)
chr7 (114-237)||(22993356-22993480)
chr7 (156-234)||(30827291-30827370)
chr7 (144-233)||(26423306-26423396)
chr7 (114-235)||(39474938-39475060)
chr7 (154-238)||(1797455-1797540)
chr7 (135-223)||(23658189-23658278)
chr7 (153-233)||(19914731-19914811)
chr7 (114-193)||(24983407-24983487)
chr7 (176-231)||(24969377-24969431)
chr7 (141-238)||(4228770-4228865)
chr7 (158-235)||(43346812-43346890)
chr7 (123-223)||(32823253-32823354)
chr7 (136-225)||(41945482-41945571)
chr7 (114-238)||(42210251-42210376)
chr7 (119-238)||(365135-365255)
chr7 (123-211)||(8734684-8734772)
chr7 (170-237)||(14650313-14650381)
chr7 (114-233)||(29151940-29152060)
chr7 (114-237)||(42032092-42032216)
chr7 (158-236)||(5039451-5039530)
chr7 (135-237)||(37514917-37515020)
chr7 (158-236)||(45960036-45960115)
chr7 (111-236)||(4973097-4973222)
chr7 (156-210)||(39420861-39420915)
chr7 (158-235)||(48244389-48244467)
chr7 (114-211)||(28744185-28744282)
chr7 (159-231)||(45447972-45448045)
chr7 (123-235)||(49142667-49142780)
chr7 (188-235)||(22268092-22268140)
chr7 (130-186)||(41267929-41267985)
chr7 (114-234)||(48224720-48224840)
chr7 (174-235)||(21530746-21530808)
chr7 (144-209)||(39230524-39230589)
chr7 (123-208)||(48551883-48551968)
chr7 (135-211)||(28396170-28396246)
[»] chr4 (73 HSPs)
chr4 (124-238)||(29895784-29895899)
chr4 (153-238)||(1446823-1446909)
chr4 (114-235)||(52950082-52950204)
chr4 (114-238)||(3159458-3159583)
chr4 (135-238)||(40272341-40272445)
chr4 (141-237)||(42722395-42722491)
chr4 (114-237)||(36262756-36262878)
chr4 (114-238)||(20128306-20128431)
chr4 (108-232)||(38075436-38075561)
chr4 (135-238)||(8889019-8889123)
chr4 (114-225)||(16450310-16450422)
chr4 (114-237)||(47078456-47078580)
chr4 (114-237)||(55921032-55921156)
chr4 (114-232)||(6779214-6779333)
chr4 (119-237)||(7246640-7246759)
chr4 (114-236)||(16645117-16645240)
chr4 (135-224)||(20421784-20421874)
chr4 (114-231)||(40780850-40780968)
chr4 (129-238)||(46108691-46108798)
chr4 (114-232)||(48834689-48834807)
chr4 (111-238)||(5472834-5472962)
chr4 (148-231)||(20354641-20354725)
chr4 (119-238)||(38166024-38166144)
chr4 (119-238)||(27248425-27248543)
chr4 (142-238)||(295550-295646)
chr4 (124-235)||(2559307-2559419)
chr4 (114-237)||(29588734-29588858)
chr4 (114-237)||(53599058-53599182)
chr4 (144-237)||(20532428-20532522)
chr4 (124-237)||(42722576-42722690)
chr4 (124-237)||(43468345-43468459)
chr4 (158-234)||(3574479-3574556)
chr4 (126-238)||(21429298-21429411)
chr4 (153-237)||(36145243-36145328)
chr4 (153-232)||(8064826-8064906)
chr4 (114-233)||(10541018-10541137)
chr4 (124-219)||(15829715-15829811)
chr4 (123-235)||(17946490-17946602)
chr4 (114-238)||(24850616-24850740)
chr4 (114-237)||(41339385-41339508)
chr4 (114-233)||(48015062-48015182)
chr4 (114-224)||(4738629-4738740)
chr4 (114-236)||(24166449-24166572)
chr4 (124-233)||(14124018-14124128)
chr4 (120-194)||(26237417-26237491)
chr4 (134-238)||(3507268-3507372)
chr4 (136-212)||(49260676-49260752)
chr4 (114-237)||(14858709-14858832)
chr4 (157-235)||(33647721-33647800)
chr4 (114-238)||(15732437-15732562)
chr4 (158-235)||(15839968-15840045)
chr4 (158-211)||(17080068-17080121)
chr4 (124-236)||(30317232-30317345)
chr4 (114-238)||(41162871-41162996)
chr4 (125-232)||(13073541-13073649)
chr4 (124-200)||(31588722-31588798)
chr4 (124-235)||(43458613-43458725)
chr4 (123-237)||(38168255-38168369)
chr4 (170-235)||(26479994-26480060)
chr4 (124-210)||(37369041-37369127)
chr4 (114-211)||(18531544-18531641)
chr4 (114-231)||(21192646-21192762)
chr4 (174-238)||(6862222-6862286)
chr4 (113-213)||(47682370-47682470)
chr4 (141-237)||(1940793-1940887)
chr4 (153-231)||(48317303-48317382)
chr4 (135-210)||(52209638-52209713)
chr4 (114-208)||(50485971-50486065)
chr4 (154-207)||(7741954-7742007)
chr4 (104-208)||(9548739-9548843)
chr4 (114-182)||(25406552-25406620)
chr4 (153-236)||(45721085-45721169)
chr4 (135-199)||(54946286-54946350)
[»] chr3 (75 HSPs)
chr3 (114-237)||(3136684-3136807)
chr3 (125-238)||(49198343-49198457)
chr3 (124-238)||(45877446-45877561)
chr3 (114-235)||(29127914-29128036)
chr3 (119-237)||(35315949-35316068)
chr3 (142-238)||(29135905-29136002)
chr3 (114-235)||(30767237-30767359)
chr3 (124-234)||(47471828-47471938)
chr3 (114-234)||(7650223-7650344)
chr3 (114-238)||(51060271-51060396)
chr3 (123-238)||(25294952-25295068)
chr3 (114-234)||(47749095-47749215)
chr3 (114-235)||(30045816-30045938)
chr3 (114-227)||(24506638-24506751)
chr3 (124-236)||(29762155-29762268)
chr3 (114-238)||(47219136-47219261)
chr3 (114-237)||(7328837-7328960)
chr3 (114-237)||(15320179-15320303)
chr3 (135-230)||(26043812-26043908)
chr3 (111-237)||(26207787-26207915)
chr3 (124-235)||(54261221-54261333)
chr3 (125-235)||(6462407-6462518)
chr3 (123-237)||(45402350-45402465)
chr3 (119-235)||(48342015-48342132)
chr3 (114-237)||(28572201-28572325)
chr3 (123-238)||(54237440-54237556)
chr3 (142-237)||(10040550-10040645)
chr3 (114-237)||(15795484-15795607)
chr3 (125-234)||(3507534-3507644)
chr3 (142-212)||(33688970-33689040)
chr3 (114-195)||(49021193-49021274)
chr3 (114-233)||(7310693-7310813)
chr3 (144-235)||(8164548-8164640)
chr3 (114-237)||(31072871-31072995)
chr3 (157-236)||(53649721-53649801)
chr3 (153-235)||(33251657-33251740)
chr3 (153-232)||(45450476-45450555)
chr3 (135-225)||(50405614-50405705)
chr3 (123-237)||(35998570-35998684)
chr3 (114-231)||(41630502-41630620)
chr3 (114-238)||(13893918-13894043)
chr3 (153-226)||(39849076-39849149)
chr3 (158-238)||(42412808-42412889)
chr3 (153-236)||(8362571-8362655)
chr3 (135-238)||(51682965-51683069)
chr3 (159-232)||(11687144-11687218)
chr3 (114-207)||(43330722-43330815)
chr3 (119-222)||(19146969-19147073)
chr3 (122-233)||(23511564-23511676)
chr3 (159-238)||(49082816-49082896)
chr3 (156-238)||(3755562-3755645)
chr3 (174-231)||(10855383-10855441)
chr3 (153-234)||(32873578-32873660)
chr3 (106-236)||(19873361-19873497)
chr3 (114-234)||(49543515-49543636)
chr3 (108-224)||(52168554-52168671)
chr3 (114-194)||(26923251-26923331)
chr3 (171-238)||(40660374-40660442)
chr3 (137-232)||(40944881-40944976)
chr3 (156-231)||(47303521-47303597)
chr3 (114-186)||(50753331-50753403)
chr3 (174-237)||(52364850-52364914)
chr3 (119-186)||(10043727-10043794)
chr3 (153-211)||(928620-928678)
chr3 (189-235)||(11025438-11025484)
chr3 (149-238)||(28242270-28242360)
chr3 (135-205)||(32522005-32522075)
chr3 (174-207)||(2668085-2668118)
chr3 (125-234)||(25515749-25515858)
chr3 (158-207)||(34374476-34374525)
chr3 (154-211)||(35923653-35923710)
chr3 (120-181)||(46797978-46798039)
chr3 (188-235)||(7612990-7613038)
chr3 (162-226)||(41223076-41223140)
chr3 (114-210)||(55069669-55069765)
[»] chr2 (72 HSPs)
chr2 (114-236)||(12864218-12864341)
chr2 (124-238)||(38962755-38962870)
chr2 (141-238)||(6358167-6358265)
chr2 (114-223)||(16325602-16325712)
chr2 (114-238)||(35946731-35946855)
chr2 (114-237)||(12455303-12455427)
chr2 (114-236)||(14169598-14169721)
chr2 (105-235)||(25540385-25540515)
chr2 (114-233)||(33005749-33005868)
chr2 (114-235)||(44139479-44139601)
chr2 (114-238)||(3643876-3644001)
chr2 (111-236)||(20612520-20612648)
chr2 (142-237)||(331494-331590)
chr2 (114-233)||(3811680-3811800)
chr2 (114-237)||(8410124-8410248)
chr2 (111-238)||(28616365-28616493)
chr2 (114-237)||(38005395-38005519)
chr2 (114-237)||(41220628-41220752)
chr2 (142-238)||(2550860-2550957)
chr2 (125-238)||(2784925-2785038)
chr2 (135-235)||(34356201-34356302)
chr2 (114-237)||(10823053-10823177)
chr2 (121-236)||(18902526-18902642)
chr2 (114-231)||(10026605-10026723)
chr2 (114-235)||(34346276-34346398)
chr2 (114-238)||(7747266-7747391)
chr2 (158-237)||(7787049-7787129)
chr2 (119-237)||(11069871-11069990)
chr2 (112-234)||(13026398-13026521)
chr2 (111-237)||(29422208-29422335)
chr2 (113-234)||(18649014-18649136)
chr2 (141-237)||(22593128-22593224)
chr2 (114-234)||(41031895-41032016)
chr2 (174-238)||(45263716-45263781)
chr2 (114-222)||(28525444-28525554)
chr2 (124-237)||(39806884-39806998)
chr2 (119-231)||(42770645-42770758)
chr2 (154-238)||(14853394-14853481)
chr2 (114-237)||(15234050-15234174)
chr2 (135-229)||(10669593-10669688)
chr2 (108-237)||(15079476-15079606)
chr2 (154-224)||(24179575-24179645)
chr2 (114-231)||(37804880-37804998)
chr2 (134-238)||(10046486-10046590)
chr2 (174-238)||(21286436-21286501)
chr2 (114-232)||(3848903-3849022)
chr2 (158-232)||(21180347-21180422)
chr2 (153-238)||(19976835-19976921)
chr2 (123-209)||(20116610-20116696)
chr2 (169-231)||(25604594-25604656)
chr2 (119-229)||(29421285-29421394)
chr2 (173-234)||(40968963-40969025)
chr2 (119-176)||(10702170-10702227)
chr2 (114-199)||(26805328-26805413)
chr2 (158-211)||(30721888-30721941)
chr2 (153-233)||(37560170-37560251)
chr2 (123-232)||(44945592-44945701)
chr2 (156-208)||(13104856-13104908)
chr2 (119-238)||(16034929-16035049)
chr2 (135-199)||(39201518-39201582)
chr2 (153-232)||(41187707-41187787)
chr2 (119-237)||(9360742-9360861)
chr2 (119-186)||(34738327-34738394)
chr2 (135-209)||(27725962-27726036)
chr2 (174-231)||(29653626-29653684)
chr2 (146-224)||(34130323-34130401)
chr2 (119-185)||(35443859-35443925)
chr2 (158-207)||(41187873-41187922)
chr2 (141-181)||(1773660-1773700)
chr2 (158-233)||(2528374-2528450)
chr2 (135-223)||(31088342-31088430)
chr2 (114-206)||(31740750-31740842)
[»] chr8 (49 HSPs)
chr8 (114-235)||(3418502-3418624)
chr8 (123-236)||(8141100-8141214)
chr8 (119-235)||(9859989-9860106)
chr8 (114-238)||(2467107-2467232)
chr8 (114-237)||(45521166-45521289)
chr8 (125-235)||(15884556-15884666)
chr8 (114-237)||(10927603-10927727)
chr8 (123-238)||(14666069-14666185)
chr8 (125-232)||(4479296-4479403)
chr8 (123-237)||(14846573-14846687)
chr8 (114-238)||(6100468-6100593)
chr8 (124-236)||(33401799-33401911)
chr8 (139-237)||(6042818-6042917)
chr8 (114-235)||(43027304-43027426)
chr8 (114-231)||(43032904-43033022)
chr8 (114-231)||(583817-583933)
chr8 (124-233)||(36662406-36662515)
chr8 (114-237)||(24837239-24837363)
chr8 (158-233)||(33935768-33935844)
chr8 (114-236)||(8997533-8997656)
chr8 (141-238)||(18374006-18374104)
chr8 (170-238)||(1013022-1013091)
chr8 (114-211)||(26570948-26571045)
chr8 (114-237)||(2964073-2964197)
chr8 (174-237)||(38922463-38922527)
chr8 (119-237)||(17981438-17981557)
chr8 (114-193)||(39969904-39969983)
chr8 (135-211)||(3567928-3568004)
chr8 (114-210)||(11298256-11298352)
chr8 (162-237)||(11785913-11785988)
chr8 (114-224)||(16291192-16291303)
chr8 (111-225)||(27975900-27976015)
chr8 (111-225)||(28033169-28033284)
chr8 (141-231)||(34710583-34710674)
chr8 (189-236)||(43497658-43497705)
chr8 (136-194)||(3379823-3379881)
chr8 (119-207)||(2209811-2209899)
chr8 (174-237)||(44893327-44893391)
chr8 (156-226)||(22810088-22810156)
chr8 (114-208)||(23895595-23895689)
chr8 (162-236)||(30903334-30903408)
chr8 (170-211)||(8586984-8587025)
chr8 (162-238)||(13085520-13085597)
chr8 (153-237)||(24938590-24938675)
chr8 (158-226)||(29933780-29933849)
chr8 (174-234)||(34846813-34846874)
chr8 (124-231)||(6940561-6940668)
chr8 (111-238)||(16893933-16894059)
chr8 (190-237)||(44031505-44031553)
[»] chr5 (69 HSPs)
chr5 (123-236)||(1538426-1538540)
chr5 (111-238)||(19572717-19572845)
chr5 (123-232)||(9805003-9805113)
chr5 (125-238)||(20525831-20525945)
chr5 (114-238)||(42861207-42861332)
chr5 (114-237)||(5731909-5732033)
chr5 (114-233)||(23383655-23383775)
chr5 (119-237)||(8513513-8513632)
chr5 (114-237)||(41163449-41163572)
chr5 (123-233)||(42086325-42086436)
chr5 (111-236)||(38369695-38369820)
chr5 (114-235)||(38897708-38897829)
chr5 (119-212)||(7616940-7617033)
chr5 (123-208)||(20255393-20255478)
chr5 (114-238)||(24653801-24653925)
chr5 (124-236)||(25417182-25417295)
chr5 (170-237)||(28857122-28857190)
chr5 (123-237)||(9812866-9812981)
chr5 (123-237)||(12766125-12766240)
chr5 (113-234)||(13664257-13664379)
chr5 (114-234)||(2485194-2485314)
chr5 (153-237)||(37263235-37263319)
chr5 (123-237)||(12705008-12705123)
chr5 (153-238)||(9168281-9168366)
chr5 (153-237)||(15034069-15034154)
chr5 (113-237)||(20682605-20682730)
chr5 (114-211)||(39099768-39099865)
chr5 (114-233)||(7866579-7866699)
chr5 (114-238)||(18136265-18136394)
chr5 (121-236)||(40117410-40117526)
chr5 (153-235)||(14588645-14588728)
chr5 (144-238)||(14974343-14974438)
chr5 (114-200)||(20228749-20228835)
chr5 (158-235)||(30995117-30995195)
chr5 (114-238)||(12081901-12082026)
chr5 (113-238)||(16755054-16755168)
chr5 (154-231)||(21375352-21375429)
chr5 (158-238)||(35561851-35561932)
chr5 (153-237)||(42291533-42291618)
chr5 (114-211)||(43399149-43399246)
chr5 (114-237)||(20692927-20693051)
chr5 (114-231)||(4016244-4016362)
chr5 (114-232)||(18294473-18294591)
chr5 (144-237)||(3653933-3654025)
chr5 (114-211)||(20590020-20590117)
chr5 (114-211)||(22295237-22295334)
chr5 (114-238)||(30349572-30349697)
chr5 (158-233)||(7308397-7308473)
chr5 (114-231)||(14728082-14728201)
chr5 (183-237)||(1898995-1899050)
chr5 (153-208)||(20156172-20156227)
chr5 (153-235)||(23247379-23247462)
chr5 (162-235)||(26077137-26077211)
chr5 (119-235)||(14152046-14152163)
chr5 (153-237)||(18262646-18262731)
chr5 (153-233)||(35813026-35813107)
chr5 (188-232)||(40060295-40060340)
chr5 (114-182)||(14235703-14235771)
chr5 (119-238)||(18045632-18045751)
chr5 (158-237)||(39728381-39728461)
chr5 (114-210)||(43212494-43212590)
chr5 (152-222)||(35638060-35638131)
chr5 (157-235)||(41800973-41801052)
chr5 (170-231)||(11845846-11845908)
chr5 (114-184)||(28857194-28857264)
chr5 (159-232)||(35006769-35006843)
chr5 (153-186)||(22655185-22655218)
chr5 (123-186)||(17693338-17693402)
chr5 (114-186)||(27648414-27648486)
[»] chr1 (71 HSPs)
chr1 (114-238)||(41663846-41663971)
chr1 (114-238)||(49078107-49078232)
chr1 (114-238)||(11397879-11398003)
chr1 (119-236)||(10422783-10422901)
chr1 (123-238)||(26325805-26325921)
chr1 (114-236)||(5855517-5855640)
chr1 (114-231)||(30927717-30927835)
chr1 (123-231)||(17642003-17642112)
chr1 (114-238)||(50503351-50503476)
chr1 (123-237)||(8763985-8764100)
chr1 (114-236)||(9659169-9659291)
chr1 (114-238)||(2980921-2981046)
chr1 (114-237)||(18915861-18915985)
chr1 (114-233)||(32142836-32142956)
chr1 (119-236)||(26660133-26660250)
chr1 (157-235)||(47312932-47313010)
chr1 (124-235)||(16263541-16263653)
chr1 (114-235)||(15465961-15466083)
chr1 (114-235)||(34719772-34719894)
chr1 (141-226)||(21849222-21849307)
chr1 (112-236)||(34697330-34697455)
chr1 (135-236)||(14254279-14254381)
chr1 (114-237)||(37339813-37339938)
chr1 (113-237)||(43959809-43959935)
chr1 (114-234)||(45361872-45361993)
chr1 (123-226)||(41696597-41696701)
chr1 (159-238)||(48798105-48798185)
chr1 (110-232)||(2567275-2567398)
chr1 (124-238)||(33004015-33004130)
chr1 (153-231)||(33498868-33498947)
chr1 (119-233)||(45726428-45726543)
chr1 (114-235)||(32867-32989)
chr1 (114-200)||(4581672-4581758)
chr1 (114-208)||(10172961-10173055)
chr1 (153-238)||(10336509-10336595)
chr1 (114-211)||(12744513-12744610)
chr1 (114-211)||(12755503-12755600)
chr1 (182-238)||(34334353-34334410)
chr1 (148-235)||(13262079-13262167)
chr1 (112-235)||(17358459-17358583)
chr1 (158-233)||(18708574-18708650)
chr1 (159-234)||(28324615-28324691)
chr1 (114-233)||(32150912-32151032)
chr1 (135-231)||(44969665-44969761)
chr1 (120-232)||(46929734-46929846)
chr1 (153-234)||(35908754-35908837)
chr1 (135-236)||(17092488-17092590)
chr1 (153-234)||(31152713-31152795)
chr1 (163-236)||(34877985-34878059)
chr1 (146-231)||(42710160-42710246)
chr1 (119-193)||(44716210-44716284)
chr1 (111-234)||(15238093-15238217)
chr1 (154-234)||(17988690-17988770)
chr1 (174-237)||(45536702-45536766)
chr1 (135-211)||(50094925-50095001)
chr1 (114-209)||(10507721-10507816)
chr1 (144-211)||(12036764-12036831)
chr1 (135-237)||(33418126-33418229)
chr1 (158-236)||(40288511-40288590)
chr1 (154-231)||(31576577-31576655)
chr1 (178-235)||(25165397-25165454)
chr1 (124-237)||(26258690-26258803)
chr1 (136-231)||(9853289-9853385)
chr1 (123-239)||(17389764-17389880)
chr1 (153-232)||(18649381-18649461)
chr1 (119-237)||(16956460-16956579)
chr1 (188-238)||(8905215-8905265)
chr1 (160-228)||(6563444-6563513)
chr1 (114-207)||(40226233-40226325)
chr1 (114-186)||(5504077-5504149)
chr1 (135-226)||(35211183-35211275)
[»] scaffold0291 (1 HSPs)
scaffold0291 (114-237)||(6851-6975)
[»] scaffold0384 (1 HSPs)
scaffold0384 (129-237)||(5969-6077)
[»] scaffold0016 (1 HSPs)
scaffold0016 (114-233)||(8690-8810)
[»] scaffold0170 (1 HSPs)
scaffold0170 (135-233)||(9845-9944)
[»] scaffold0002 (2 HSPs)
scaffold0002 (114-237)||(566-690)
scaffold0002 (114-238)||(319417-319542)
[»] scaffold0316 (1 HSPs)
scaffold0316 (121-235)||(1610-1725)
[»] scaffold0209 (1 HSPs)
scaffold0209 (114-231)||(12577-12693)
[»] scaffold0086 (1 HSPs)
scaffold0086 (135-235)||(26181-26282)
[»] scaffold0009 (2 HSPs)
scaffold0009 (111-235)||(42818-42943)
scaffold0009 (125-235)||(9434-9551)
[»] scaffold0079 (1 HSPs)
scaffold0079 (177-237)||(8171-8231)
[»] scaffold0376 (1 HSPs)
scaffold0376 (119-237)||(12666-12785)
[»] scaffold0041 (1 HSPs)
scaffold0041 (112-219)||(25100-25207)
[»] scaffold0004 (2 HSPs)
scaffold0004 (135-237)||(7845-7948)
scaffold0004 (136-238)||(94991-95093)
[»] scaffold0050 (1 HSPs)
scaffold0050 (158-234)||(72631-72708)
[»] scaffold0029 (1 HSPs)
scaffold0029 (158-234)||(41043-41120)
[»] scaffold0010 (2 HSPs)
scaffold0010 (114-211)||(155700-155797)
scaffold0010 (125-236)||(25784-25896)
[»] scaffold0024 (1 HSPs)
scaffold0024 (119-211)||(149408-149500)
[»] scaffold0223 (1 HSPs)
scaffold0223 (124-207)||(16906-16989)
[»] scaffold0001 (1 HSPs)
scaffold0001 (111-212)||(65138-65239)
[»] scaffold0332 (1 HSPs)
scaffold0332 (206-237)||(15327-15358)
[»] scaffold0006 (1 HSPs)
scaffold0006 (141-237)||(68513-68607)
[»] scaffold0155 (1 HSPs)
scaffold0155 (125-211)||(19278-19364)
[»] scaffold0341 (1 HSPs)
scaffold0341 (160-228)||(18637-18706)
[»] scaffold0005 (1 HSPs)
scaffold0005 (174-237)||(271123-271187)


Alignment Details
Target: chr6 (Bit Score: 83; Significance: 4e-39; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 13035998 - 13036116
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| |||    
T  13035998 ttttgctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaa 13036097  T
Q  218 tcgaacccggtattccccg 236  Q
    ||||||||| |||||||||    
T  13036098 tcgaacccgatattccccg 13036116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 5253212 - 5253336
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| ||||||||||  |||| ||| ||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  5253212 tttttttttgctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 5253311  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  5253312 gggaatcgaacccggtattccccgg 5253336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 6606086 - 6606211
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| ||||||||||| |||||||||||||| | |||||||||||||||||   |||||||||||||||||| |||||    
T  6606086 ttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccct 6606185  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    |  |||||||||||||||||||||||    
T  6606186 gagaatcgaacccggtattccccgga 6606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 21898769 - 21898644
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||| ||||||| ||  ||| |||||||||| | ||||||||||||||||| ||||||||||||| |||||||| |||    
T  21898769 ttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcct 21898670  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || |||||||||||||||||||||||    
T  21898669 gggaatcgaacccggtattccccgga 21898644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 14107344 - 14107470
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc- 209  Q
    ||||||| ||| ||||||||| | ||||| ||||||| |||| ||| ||||||||| | |||||||||||||||||  ||||||| |||| ||||||||     
T  14107344 ttattttttttggctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcct 14107443  T
Q  210 cctggaaatcgaacccggtattccccg 236  Q
    ||||| |||||||||||||||||||||    
T  14107444 cctgggaatcgaacccggtattccccg 14107470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 10311458 - 10311583
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||||||| ||||||  ||||||||||| |||  |||||||||| |||| ||||||||| ||| ||||||||||||| |||||||||||     
T  10311458 ttttttttagctttcgcaccagttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttcccctt 10311557  T
Q  214 ga-aatcgaacccggtattccccgga 238  Q
    ||  ||||||||||||||||||||||    
T  10311558 gaggatcgaacccggtattccccgga 10311583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 29333128 - 29333248
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| |||| |||||||| | ||| | |||| |||||  |||||||||| ||  | ||||||||||||||||| ||||||||||||  ||||||||||||    
T  29333128 ttttttttttctttcgcaccggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgttcccctg 29333227  T
Q  214 gaaatcgaacccggtattccc 234  Q
    |||||||||||||||||||||    
T  29333228 gaaatcgaacccggtattccc 29333248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 29444754 - 29444878
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| |||||||||  |||||| ||||||||||   ||||| ||||||| | ||||||||||||||||| ||||||||||||| |||||| |||||    
T  29444754 ttttttttggctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccct 29444853  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
     ||||||||||||||||| ||||||    
T  29444854 agaaatcgaacccggtatcccccgg 29444878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 12635935 - 12635810
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||| ||||||||| | ||||| |||||||||||||||| ||||||||| | ||  ||||||||||||| |||||| |||||| |||| |||||||    
T  12635935 ttttttttggctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccct 12635836  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || |||| |||| |||||||||||||    
T  12635835 gggaatcaaacctggtattccccgga 12635810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 3601205 - 3601082
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| ||||||||||  |||||||||||||| | ||| || ||| |||||| ||||||||||||| |||||| |||||    
T  3601205 tttttttttgctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccct 3601106  T
Q  213 ggaaatcgaacccggtattccccg 236  Q
    |  ||||||| |||||||||||||    
T  3601105 gagaatcgaaaccggtattccccg 3601082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 19089624 - 19089494
Alignment:
Q  109 gattattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt- 207  Q
    |||| |||| ||| ||||||||| | ||||| ||||||||||  || ||||||||||| | ||| ||||||||||||| | ||||||||||||||||||     
T  19089624 gatttttttttttggctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttc 19089525  T
Q  208 cccctggaaatcgaacccggtattccccgga 238  Q
    ||||||| |||| |||| |||||||| ||||    
T  19089524 cccctgggaatcaaacctggtattcctcgga 19089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 3587934 - 3588059
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||| ||||||||||||||||| || ||| |||  || ||||||||||| |  ||||||||||||| ||  |||||||||||| |||||||||| |    
T  3587934 ttttttttggctttcgcatcagtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttcccctt 3588033  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || ||||||||||||||||| |||||    
T  3588034 gggaatcgaacccggtattctccgga 3588059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 8932782 - 8932657
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| |||||| |||  ||||  || ||||| | ||||||||||||||||| |||||| ||||||||||||| |||||    
T  8932782 ttttttttggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccct 8932683  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || ||||||||||| |||||||||||    
T  8932682 gggaatcgaacccgatattccccgga 8932657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 8944248 - 8944123
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| |||||| |||  ||||  || ||||| | ||||||||||||||||| |||||| ||||||||||||| |||||    
T  8944248 ttttttttggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccct 8944149  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || ||||||||||| |||||||||||    
T  8944148 gggaatcgaacccgatattccccgga 8944123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 34954613 - 34954730
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    ||||||||||||||  ||||| |||||| |||  |||||||||||||||| |||||||||||||| ||  |||||||||||  |||||| ||||||  ||    
T  34954613 ttttgctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaa 34954712  T
Q  218 tcgaacccggtattcccc 235  Q
    ||||||| ||||||||||    
T  34954713 tcgaacctggtattcccc 34954730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 8611972 - 8612087
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcga 221  Q
    ||||||||| | ||||||||||||||||  |||| ||||||||| |  ||||||||||| |||| | |||||| |||| |||||||| ||| | ||||||    
T  8611972 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcga 8612071  T
Q  222 acccggtattccccgg 237  Q
    ||||||||||||||||    
T  8612072 acccggtattccccgg 8612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 8938827 - 8938707
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaa 217  Q
    |||| |||||||| | ||||| |||||| |||  |||||||||||||  | |||||||||||| || | |||||||| ||||||||||||| ||||| ||    
T  8938827 tttttctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaa 8938728  T
Q  218 tcgaacccggtattccccgga 238  Q
    |||||||  ||||||||||||    
T  8938727 tcgaaccaagtattccccgga 8938707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 9633614 - 9633708
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc 208  Q
    |||| ||| ||||||||| | ||||| ||||||||||  |||| ||||||||| | ||| ||||||||||||| ||||||||||||| |||||||    
T  9633614 ttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 12606512 - 12606426
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 238  Q
    |||| ||||||||| | ||| ||||||||||||| ||||||||||||  |||||| ||||||||||||||| | |||||||||||||    
T  12606512 gtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccgga 12606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 13469055 - 13468929
Alignment:
Q  113 attttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccc 211  Q
    ||||| ||| ||||||||| | |||||  |||||||||| |||| ||||||||||| ||| |||||||||||||  |||||| ||||  |||||| ||||    
T  13469055 attttttttggctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccc 13468956  T
Q  212 tggaaatcgaacccggtattccccgga 238  Q
    | | ||| ||||| |||||||||||||    
T  13468955 taggaattgaacctggtattccccgga 13468929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 2271313 - 2271413
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 234  Q
    |||||||||||| |||  |||||||||||||| | ||| ||||||||| ||| ||||||||| ||| |||||| | |||  |||||||||||||||||||    
T  2271313 gtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgtt-ctctgagaatcgaacccggtattccc 2271411  T
Q  235 cg 236  Q
    ||    
T  2271412 cg 2271413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 14783409 - 14783494
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaa 199  Q
    |||| ||| ||||||||| | ||||| ||||||||||| |||||||||||||| | ||||||||||||||||| | |||| |||||    
T  14783409 ttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactagccaa 14783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 31129298 - 31129201
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||||||||||||| | ||||| ||| ||||||  ||| || ||||||||| ||||||||||||||||| |||||| |||||| |||| |||||    
T  31129298 tttttttttgctttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcactagccaagcgttgctcccc 31129201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 9179755 - 9179846
Alignment:
Q  144 ccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccc 234  Q
    |||||||  ||||||||||||||   |||||||||||||| || |  ||||| ||||||||||| ||||||| |||||||||||||||||||    
T  9179755 ccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccc 9179846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 32157177 - 32157252
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    |||||||| |||||||   |||| |||||||||| |||||||||||||| || |||||||| ||||||||||||||    
T  32157177 gtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaagtgttgttccc 32157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 5029938 - 5029825
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccct 212  Q
    |||| ||| ||||||||| ||||||| |||||| |||   ||| |||||||||  |||||||||||||||||| ||||||| ||||  ||||||| ||||    
T  5029938 ttttttttggctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccct 5029839  T
Q  213 ggaaatcgaacccg 226  Q
    |  |||||||||||    
T  5029838 gagaatcgaacccg 5029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 5333082 - 5333001
Alignment:
Q  157 acgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 238  Q
    |||||||||||| |||||| |||||| ||| |||||||| ||||||||||||| | |  ||||||||| | |||||||||||    
T  5333082 acgactaatctggctcatgtgtagagacatgcgcactggacaagtgttgttccgccgagaatcgaacctgatattccccgga 5333001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 11142697 - 11142600
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||| |||||||| |||  |||| |||| |||  |||||||| ||||||| |||||    
T  11142697 gacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaactcggtatttcccgg 11142600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 19230576 - 19230668
Alignment:
Q  142 acccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 234  Q
    ||||||||||  || |||||||||| | ||| ||||||||||||| |  |||| ||||| ||||||||| || |||||||| |||||||||||    
T  19230576 acccaccaatgatgaacgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttcccttgaaaatcgaatccggtattccc 19230668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 30788842 - 30788965
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||||||| | ||||| ||||||||||  |||| ||||||||| | ||| ||| ||||||||| ||||||||||||  |||||| || ||    
T  30788842 ttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt-ccatg 30788940  T
Q  214 gaaatcgaacccggtattccccgga 238  Q
      |||| |||||| |||||||||||    
T  30788941 agaatcaaacccgatattccccgga 30788965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 8888964 - 8888905
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccct 212  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||  |||||| ||||    
T  8888964 gtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtttccct 8888905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 9147379 - 9147300
Alignment:
Q  157 acgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 235  Q
    |||||||||| | || ||||||||||||||  ||||||| ||||||| ||| ||||||| ||||||||||| ||||||||    
T  9147379 acgactaatccggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattcccc 9147300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 13391363 - 13391289
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattc 232  Q
    ||||||||| | ||| ||||||||||||| ||||||||||||   ||||||||||| |||||||| ||| |||||    
T  13391363 cgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcccctgaaaatcgaatccgatattc 13391289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 15643862 - 15643939
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 234  Q
    |||| ||||||||| |||||||||||||| ||    ||| ||||| |||||||||||||||  ||||||||||| |||||||    
T  15643862 gtgggcgactaatccgactcatgcgtagatgc----gcattggcctagtgttgttcccctgtgaatcgaacccgttattccc 15643939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 24671915 - 24671974
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattc 232  Q
    ||||||||||||| | |||||| |||||||||||||| |||| ||| |||||||||||||    
T  24671915 tgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattc 24671974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 33859355 - 33859426
Alignment:
Q  161 ctaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtatt 231  Q
    |||||| |||| |||||||||||||| |||||||| |||  |||||| |||||  |||||||||||||||||    
T  33859355 ctaatccgactaatgcgtagaggcatgcgcactgggcaaacgttgttccccctaaaaatcgaacccggtatt 33859426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 21945354 - 21945312
Alignment:
Q  170 ctcatgcgtagaggcatacgcactggccaagtgttgttcccct 212  Q
    ||||||| |||||||||||| |||||||||| |||||||||||    
T  21945354 ctcatgcatagaggcatacgaactggccaagcgttgttcccct 21945312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 8149797 - 8149906
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacc 224  Q
    ||||||| | |||||  |||||||||  |||||||||||||  | || ||||||||||||||  ||| ||| ||| | |||||| ||| | |||||||||    
T  8149797 tttcgcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgcattggtcaaatattgttctcctaggaatcgaacc 8149896  T
Q  225 cggtattccc 234  Q
    || |||||||    
T  8149897 cgatattccc 8149906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 9366418 - 9366534
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    |||| |||||||||| |||| | ||| |||||  |||| || |||||| | ||| ||||||||||||| ||||||||||||| ||| || |||||  |||    
T  9366418 tttttctttcgcatcggtttttaacctaccaaaggtgg-cgtctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaa 9366516  T
Q  218 tcgaacccggtattcccc 235  Q
    ||||||| | ||||||||    
T  9366517 tcgaacctgatattcccc 9366534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 48804803 - 48804678
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||||||||||||| | ||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||| |    
T  48804803 tttttttttgctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcccctt 48804704  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || |||||||||||||||||||||||    
T  48804703 gggaatcgaacccggtattccccgga 48804678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 10047865 - 10047990
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaat-ctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccc 211  Q
    |||| ||| ||||||||| | ||||| ||||||||||| ||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||    
T  10047865 ttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaattctg-ctcatgcgtagaggcctgcgcactggccaagtgttgttccccc 10047963  T
Q  212 tggaaatcgaacccggtattccccgga 238  Q
    ||| |||||||||||||||||||||||    
T  10047964 tgggaatcgaacccggtattccccgga 10047990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 4195200 - 4195316
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcga 221  Q
    ||||||||||| |||||  |||||||||| ||||||| |||||| | ||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||    
T  4195200 gctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcga 4195299  T
Q  222 acccggtattccccgga 238  Q
    || ||||||||||||||    
T  4195300 actcggtattccccgga 4195316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 36619243 - 36619365
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||||||||| ||   |||| |||||||||||| |||||||||||||| | ||||||||||||||||| | |||||| ||||||||||| |||||    
T  36619243 tttttttttgctttcacactggtttttgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccct 36619342  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    || ||||||||||||||||||||    
T  36619343 gggaatcgaacccggtattcccc 36619365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 38578856 - 38578980
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||| |||||||| | ||||| ||||||||||  |||| ||||||||| | ||||||||||||||||| ||||||||||||| |||||| |||||    
T  38578856 ttttttttttctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccct 38578955  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||| ||||||||||    
T  38578956 gggaatcgaacccgatattccccgg 38578980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 17748371 - 17748494
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||||| ||||| |||||| |||  |||||||||||||| | ||| | ||||||||||| ||||||||||||| |||||| |||||    
T  17748371 ttttttttggctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccct 17748470  T
Q  213 ggaaatcgaacccggtattccccg 236  Q
    || |||||||||||||||||||||    
T  17748471 gggaatcgaacccggtattccccg 17748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 22974087 - 22973964
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||  | ||||||||||||||||  |||||||||||||||| |||||||||||| |||| | ||||||||||| |||||| |||||    
T  22974087 ttttttttggctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccct 22973988  T
Q  213 ggaaatcgaacccggtattccccg 236  Q
    |  |||||||||||||||||||||    
T  22973987 gagaatcgaacccggtattccccg 22973964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 13095978 - 13095854
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||| ||| | ||||| ||||||||||  |||  ||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  13095978 ttttttttggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 13095879  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||| ||||||||||||||||||    
T  13095878 gggaatagaacccggtattccccgg 13095854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 34659346 - 34659222
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||||||| | ||||  ||| ||||||| |||| ||||||||| | ||| ||||||||||||| |||||||| |||| |||||||||||     
T  34659346 tttttttttgctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttcccctt 34659247  T
Q  214 ga-aatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  34659246 gagaatcgaacccggtattccccgg 34659222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 21190769 - 21190894
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||||||||||||| | ||||  ||||||||| |  ||| ||||||||||||||| ||||||||||||| |||||| |||||| |||| ||| |||    
T  21190769 tttttttttgctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcct 21190868  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
     | |||||||||||||||||||||||    
T  21190869 aggaatcgaacccggtattccccgga 21190894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 10317735 - 10317858
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| || |||||||  |||  ||||||||||| || |||| ||||||||||||||||| ||||||||| || |||||    
T  10317735 tttttttttgctttcgcaccggtttccgatccaccaaaggtgagcgactaatctg-cttatgcatagaggcatacgcactgaccaagtgttattccccct 10317833  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  10317834 gggaatcgaacccggtattccccgg 10317858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 43925632 - 43925508
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||||||||| |||| |||||||| ||| |||  ||  || |||||||   ||||||||||||||||| ||||||| |||||||||||| |||||    
T  43925632 tttttttttgctttcacatcggtttctgatccatcaaaggtaaacaactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccct 43925533  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  43925532 gggaatcgaacccggtattccccgg 43925508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 47341987 - 47341872
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||| |  |||| ||||||||||| ||| ||||| ||||   ||| ||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  47341987 gctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcga 47341888  T
Q  222 acccggtattccccgg 237  Q
    || |||||||||||||    
T  47341887 actcggtattccccgg 47341872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 14535414 - 14535290
Alignment:
Q  110 attattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc- 208  Q
    |||||||| |||| || ||||| |||||||||||||| |||| |||| |||||||||   ||| ||||||||||||| | |||||||||||||||||||     
T  14535414 attatttt-ttttactctcgcaccagtttctgacccatcaatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttct 14535316  T
Q  209 ccctggaaatcgaacccggtattccc 234  Q
    ||||| ||||  ||||||||||||||    
T  14535315 ccctgaaaatgaaacccggtattccc 14535290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 5069804 - 5069928
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||||| ||||| ||||||||||  |||| ||||||||| | ||  ||||||||||||| | |||| || ||| |||||||| |||    
T  5069804 ttttttttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcct 5069903  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    ||||||||||||||||||| |||||    
T  5069904 ggaaatcgaacccggtatttcccgg 5069928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 18785777 - 18785665
Alignment:
Q  126 ttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacc 224  Q
    |||||| | ||||| |||||||||   ||| ||||||||||    |||||||||||||||| |||||||||||||||||||| ||||| | |||||||||    
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacc 18785678  T
Q  225 cggtattccccgg 237  Q
    |||||||||||||    
T  18785677 cggtattccccgg 18785665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 27028389 - 27028281
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaa 222  Q
    |||||||| | ||||| ||||||||||  |||  |||||||||   |||||| |||||||||| |||||||||||||||||||| |||||||||||||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa 27028290  T
Q  223 cccggtatt 231  Q
    || ||||||    
T  27028289 cctggtatt 27028281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 45697179 - 45697303
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||||| |   ||||| ||||||||||  |||||||||||| |  |||||||||||||||||| |||||||  |||||||||||||||||    
T  45697179 tttttttttgctttcgtactggtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaagtgttgttcccctg 45697278  T
Q  214 gaaatcgaacccggtattccccgga 238  Q
      ||||||| | | |||||||||||    
T  45697279 agaatcgaatctgatattccccgga 45697303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 27875116 - 27875199
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 235  Q
    |||||||||||||  |||||||||||||||||||  |||||||||||||||| || ||||||| ||||||| ||||||||||||    
T  27875116 gtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtattcccc 27875199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 3353534 - 3353424
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaac 223  Q
    |||||||| | |||||||| ||| |||  |||||||||||||| | ||| ||||||||||||| |||||||||||| ||||||| |||||  |||||| |    
T  3353534 ctttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttccctgagaatcgatc 3353435  T
Q  224 ccggtattccc 234  Q
    ||| |||||||    
T  3353434 ccgatattccc 3353424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 22573892 - 22573811
Alignment:
Q  154 tggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 235  Q
    ||||||| ||||| | |||||||||| |||||| |||||||| ||| ||||||||||||| |||||||||||| ||||||||    
T  22573892 tggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgttgttcccctgaaaatcgaacccgatattcccc 22573811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 43862006 - 43862083
Alignment:
Q  159 gactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 235  Q
    |||||||| | ||||||||||||||||| ||||||||||||  |||||| ||||||| ||||||||||||||||||||    
T  43862006 gactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattcccc 43862083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 1606061 - 1605937
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| || |||||||  |||| ||||||||| | |||| || |||||||||  |||||||||||| |||||| |||||    
T  1606061 ttttttttggctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccct 1605962  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    |||||||||||| ||||||| ||||    
T  1605961 ggaaatcgaaccaggtattctccgg 1605937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 16802243 - 16802119
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||| ||| ||||||  ||||||||||| |||  ||||||||| | ||| ||||||||||||||||||||||||||  |||||||| |||    
T  16802243 ttttttttggcttttgcaccagttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcct 16802144  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
       ||||||| ||||||||||||||    
T  16802143 aagaatcgaatccggtattccccgg 16802119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 22993356 - 22993480
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||||||||||||||  |||  ||||||||| |  || ||||||||||||| | ||||||||||| |||||||| |||    
T  22993356 ttttttttggctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcct 22993455  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
     | ||||||||||| ||||||||||    
T  22993456 cggaatcgaacccgatattccccgg 22993480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 30827370 - 30827291
Alignment:
Q  156 gacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccc 234  Q
    ||||||||||| | ||| ||||||||||||| || |||||||||||||||||| ||||| |||||||||| |||||||||    
T  30827370 gacgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtattccc 30827291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 26423306 - 26423396
Alignment:
Q  144 ccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattcc 233  Q
    |||||||  ||| |||||||||||| ||| ||||||||||||   |||||||||||| |||| ||||||||| ||||||||||||||||||    
T  26423306 ccaccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtattcc 26423396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 39475060 - 39474938
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| |||||||||||||   ||||  ||||||| ||  |||||||||||||| | |||||||||||||| || ||||||| ||||| |||||||||| |    
T  39475060 tttttttttgctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccat 39474961  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
     | ||||||||||||||| ||||    
T  39474960 aggaatcgaacccggtatacccc 39474938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 1797540 - 1797455
Alignment:
Q  154 tggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgga 238  Q
    |||||||||| || | ||| ||||||||| ||| ||||||||||||| |||| ||||||||| |||||||||||||||||| ||||    
T  1797540 tggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcgga 1797455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 23658278 - 23658189
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaac 223  Q
    ||||||||||||||||   ||||||||||||| | ||| || |||||||||| | ||||||||||| |||||| ||||||||||||||||    
T  23658278 gtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaac 23658189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 19914731 - 19914811
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcc 233  Q
    |||| ||| ||||||| ||||||||||||||||| |||| |||||||| ||||||||  ||| |||||||||| |||||||    
T  19914731 gtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgttcctttgggaatcgaacccagtattcc 19914811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 24983407 - 24983487
Alignment:
Q  114 ttttgttttgctttcgcatcagtttct-gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcact 193  Q
    |||| ||| ||||||||||| |||||  ||||||||||| |||||||||||||| | ||||||||||||||||| ||||||    
T  24983407 ttttttttggctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 24969377 - 24969431
Alignment:
Q  176 cgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 231  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  24969377 cgtagaggcacgcgcactggccaagtgttgtt-ccctggaaatcgaacccggtatt 24969431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 4228770 - 4228865
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 238  Q
    |||||| |||| |||| ||||||||| | ||||||||||| |||||  |||||||||||  ||||||  ||||||||||||||| |||||||| ||||    
T  4228770 gacccatcaatggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt--cctggaaatcgaacctggtattcctcgga 4228865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 43346812 - 43346890
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattcccc 235  Q
    ||||||||| | ||| | ||||||||||| ||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  43346812 cgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggtattcccc 43346890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 32823354 - 32823253
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||| | ||||| |||||| |||| ||   ||||||||| | ||| ||||||||||||||| ||| |||||||||||||| ||||||| ||||||    
T  32823354 gctttcgcacccgtttccgacccatcaatggtctgcgactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccctgggaatcga 32823255  T
Q  222 ac 223  Q
    ||    
T  32823254 ac 32823253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 41945571 - 41945482
Alignment:
Q  136 tttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaaccc 225  Q
    |||| ||| ||||||  |||||||||||||| | ||| ||||||||||||| ||||||||||||| ||| ||||| || ||||| |||||    
T  41945571 tttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattcccttgaaaatcaaaccc 41945482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 42210251 - 42210376
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||| ||||||||||| ||||| ||||||||||  ||||  || ||||| | ||| ||||||||||||| ||||||||||||  |||| || | ||    
T  42210251 ttttttttggctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcact 42210350  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || ||||||| |||||||||| ||||    
T  42210351 gggaatcgaagccggtattcctcgga 42210376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 365255 - 365135
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaa 217  Q
    |||| |||||||||| ||||  ||||||||| | ||||   ||||||| | ||||||||||||||||| |||||||   ||| |||||||| ||||  ||    
T  365255 tttttctttcgcatcggttttcgacccaccactggtgggtcactaatcaggctcatgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaa 365156  T
Q  218 tcgaacccggtattccccgga 238  Q
    |||||||||||||||| ||||    
T  365155 tcgaacccggtattcctcgga 365135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 8734684 - 8734772
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||||||| | ||||| ||||||||||  |||| ||||||||||| ||| ||||| ||||||| ||||||| |||||  |||||||||    
T  8734684 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccc 8734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 14650381 - 14650313
Alignment:
Q  170 ctcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 237  Q
    |||||||||||||||||| ||||||| ||||  ||||||| ||||||||||||||||| ||||| ||||    
T  14650381 ctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaacccgatattctccgg 14650313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 29152060 - 29151940
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccct 212  Q
    |||| ||| ||||||||||| ||||| |||||| |||| || ||||| ||||| |  || || |||||||||| |||||||| |||  |||||||  |||    
T  29152060 ttttttttggctttcgcatcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcct 29151961  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    || ||||||||||||||||||    
T  29151960 gggaatcgaacccggtattcc 29151940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 42032216 - 42032092
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||| ||||| ||||| ||||| |||||| |||  |||||| ||||||  | |||||||||||| | ||  |||||||||||  |||||||||| |    
T  42032216 ttttttttagctttagcatcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgt 42032117  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||| ||||||||||||    
T  42032116 gggaatcgaaccaggtattccccgg 42032092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 5039451 - 5039530
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccg 236  Q
    ||||||||| | |||||||||||||| ||  |||||| |||||||||||||| ||| | |||||||| ||||||||||||    
T  5039451 cgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtattccccg 5039530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 37515020 - 37514917
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcc 233  Q
    ||||| ||||||| ||| ||| |||| ||||| | ||| ||||||||| ||| ||||||| ||||  ||||||||| ||| ||||||||||| |||||||    
T  37515020 gtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaacccagtattcc 37514921  T
Q  234 ccgg 237  Q
    ||||    
T  37514920 ccgg 37514917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 45960036 - 45960115
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 236  Q
    ||||||||| | || |||||||||||||| ||||||| |||||||||||| ||| ||| |||| ||| ||||||||||||    
T  45960036 cgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcggtattccccg 45960115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 4973097 - 4973222
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    ||||||| |||| |||| ||| ||||||||| | ||||||   ||||||||||||| | ||| | ||||||||||| |||| ||| |||||||| |||||    
T  4973097 ttattttttttttcttttgcaccagtttctg-ctcaccaaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccc 4973195  T
Q  211 c-tggaaatcgaacccggtattccccg 236  Q
    | | | ||||||||||| |||||||||    
T  4973196 cgtaggaatcgaacccgatattccccg 4973222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 39420915 - 39420861
Alignment:
Q  156 gacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    ||||||||||| | ||||||||||||||||  ||||||||||||| |||||||||    
T  39420915 gacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttccc 39420861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 48244389 - 48244467
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 235  Q
    ||||||||| | |||||||||||||||| ||||||||  ||||  ||||||||| | ||||| ||||||||||||||||    
T  48244389 cgactaatccggctcatgcgtagaggcaaacgcactgatcaagcattgttccccttagaaattgaacccggtattcccc 48244467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 28744282 - 28744185
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||| ||||||||| ||||||| ||||||||||  |||||||||||||| | ||| |  ||||||| || || ||||||||||  |||||||||    
T  28744282 ttttttttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgttcccc 28744185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 45448045 - 45447972
Alignment:
Q  159 gactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtatt 231  Q
    |||||||||||||  || ||||||| || |||||| |||||| ||||||| |||||||||||||||| ||||||    
T  45448045 gactaatctgactagtgtgtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtatt 45447972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 49142667 - 49142780
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||| || |||  |||||| |||  |||| | ||||||| | ||| |||||||||||||  |||||||| ||| |||||| ||||| | ||||||    
T  49142667 gctttcgcaccaattttcgacccatcaaaggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcga 49142766  T
Q  222 acccggtattcccc 235  Q
    ||||||||||||||    
T  49142767 acccggtattcccc 49142780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 22268092 - 22268140
Alignment:
Q  188 cgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 235  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  22268092 cgcactggccaaatgttgttccccctgggaatcgaacccggtattcccc 22268140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 41267929 - 41267985
Alignment:
Q  130 catcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcat 186  Q
    |||| ||||| |||||| |||  ||||||||||||||| ||||||||||||||||||    
T  41267929 catcggtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcat 41267985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 48224720 - 48224840
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||||||||  ||||  ||||||||||   || | ||||||| |||||||| ||||||  ||| |||||||  |||| ||||||||| ||    
T  48224720 tttttttttgctttcgcattggttttcgacccaccaaagatgaaggactaatttgactcatacgtagatacatgcgcactgatcaagcgttgttcccatg 48224819  T
Q  214 gaaatcgaacccggtattccc 234  Q
    ||||| |||| || |||||||    
T  48224820 gaaattgaactcgatattccc 48224840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 21530808 - 21530746
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 235  Q
    |||||||||||||  |||||| |||||||||||| ||||||| |||| ||||| |||||||||    
T  21530808 tgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagtattcccc 21530746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 39230589 - 39230524
Alignment:
Q  144 ccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc 209  Q
    ||||||||||||||| ||||||| | ||||||| ||||||||| | || | | |||||||||||||    
T  39230589 ccaccaatagtggacaactaatccggctcatgcatagaggcatgcacattagtcaagtgttgttcc 39230524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 48551968 - 48551883
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc 208  Q
    ||||||||| | ||||| || ||| |||  |||||||||||||| | ||||| ||||||||||| |||| |||||||  |||||||    
T  48551968 gctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgttc 48551883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 28396170 - 28396246
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||| ||||||||||  || ||||||||||| | |||||||||| |||||| |||||  || ||| ||||||||||    
T  28396170 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttcccc 28396246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 29895899 - 29895784
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaa 222  Q
    |||||||| | ||||| || |||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29895800  T
Q  223 cccggtattccccgga 238  Q
    ||||||||||||||||    
T  29895799 cccggtattccccgga 29895784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 1446909 - 1446823
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 238  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  1446909 gtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgga 1446823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 52950204 - 52950082
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||||| ||||| ||||||||||  ||||||||||||||||  ||||| |||||| ||| ||||||||||||| |||||| |||||    
T  52950204 tttttttttgctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccct 52950105  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    || ||||||||||| ||||||||    
T  52950104 gggaatcgaacccgatattcccc 52950082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 3159458 - 3159583
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||| ||| | ||||| ||||||||||| |||  ||||||||||| ||| ||||||||||||| ||||||||||||| |||||| |||||    
T  3159458 tttttttttgcttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccct 3159557  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    |||| ||||||||||||||| |||||    
T  3159558 ggaagtcgaacccggtattctccgga 3159583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 40272341 - 40272445
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcc 233  Q
    ||||| ||||||||||| ||| ||||| |||| |||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  40272341 gtttccgacccaccaatggtgaacgacaaatccgacttatgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattcc 40272440  T
Q  234 ccgga 238  Q
    |||||    
T  40272441 ccgga 40272445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 42722395 - 42722491
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||| | |||||||||||||| ||||||||| |||||| || |||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  42722395 gacccaccattggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgttcccctgggaatcaaacccggtattccccgg 42722491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 36262756 - 36262878
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||||||||  ||||||||||||||||  |||| ||||||||| ||||| |||||||||||||  |||||||||||| |||||| |||||    
T  36262756 ttttttttggctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt-ccctg 36262854  T
Q  214 gaaatcgaacccggtattccccgg 237  Q
    | ||||||||||||||||| ||||    
T  36262855 ggaatcgaacccggtattctccgg 36262878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 20128431 - 20128306
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||||||||||||||| |||||||||||||||  ||| |||||| |||||| |||||||||||||  ||||| |||||    
T  20128431 ttttttttggctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccct 20128332  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    |  |||||||||| ||||||||||||    
T  20128331 gagaatcgaacccagtattccccgga 20128306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 232
Target Start/End: Complemental strand, 38075561 - 38075436
Alignment:
Q  108 tgattattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-t 206  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||||  |||||| | ||||  | ||||||||||||||||| ||||||||||||| |||| |    
T  38075561 tgattttttttttttgctttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtt 38075462  T
Q  207 tcccctggaaatcgaacccggtattc 232  Q
    |||||||  |||||||||||||||||    
T  38075461 tcccctgagaatcgaacccggtattc 38075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 8889123 - 8889019
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 233  Q
    ||||| ||||||||||  |||||||||||||| | ||||||||||||| ||| ||||||| |||||||||||| ||||| | ||||||||||||||||||    
T  8889123 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattcc 8889024  T
Q  234 ccgga 238  Q
    |||||    
T  8889023 ccgga 8889019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 16450422 - 16450310
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| |||| |||||  |||||||||||||||| |||||||||||||||||  |||||||||||| |||||| |||||    
T  16450422 tttttttttgctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccct 16450323  T
Q  213 ggaaatcgaaccc 225  Q
    || ||||||||||    
T  16450322 gggaatcgaaccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 47078580 - 47078456
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||||||||||||   ||||| ||||||||||| |||  ||||||||| | ||| |||||||||||||  |||||||||||| |||||| |||||    
T  47078580 tttttttttgctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccct 47078481  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  47078480 gggaatcgaacccggtattccccgg 47078456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 55921156 - 55921032
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| ||||||||||  |||  ||| ||||| | ||||| ||||||||||| ||||||| |||||||||||| |||||    
T  55921156 tttttttttgctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccct 55921057  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  55921056 gggaatcgaacccggtattccccgg 55921032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 6779333 - 6779214
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||||| | ||| ||  ||||||  |||||||||||||| | ||||||| ||||||||| ||||||||||| |||||||| |||||    
T  6779333 tttttttttgctttcgcatcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccct 6779234  T
Q  213 ggaaatcgaacccggtattc 232  Q
    || |||||||||||||||||    
T  6779233 gggaatcgaacccggtattc 6779214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 7246640 - 7246759
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaa 217  Q
    |||| |||||||| | ||||| ||||||||||  |||| ||||||||| | ||||||||||||||||| ||||||||||||| ||||||||| || | ||    
T  7246640 ttttcctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaa 7246739  T
Q  218 tcgaacccggtattccccgg 237  Q
    |||||||| |||||||||||    
T  7246740 tcgaacccagtattccccgg 7246759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 16645240 - 16645117
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccct 212  Q
    |||| ||||||||||||| | ||||| |||||||||   |||| ||||||||| |||||||| |||||||||| | ||||||||||| |||||||  |||    
T  16645240 tttttttttgctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcct 16645141  T
Q  213 ggaaatcgaacccggtattccccg 236  Q
    | ||||||||||||||||||||||    
T  16645140 gaaaatcgaacccggtattccccg 16645117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 20421874 - 20421784
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacc 224  Q
    ||||| |||||| ||||  ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  20421874 gtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacc 20421784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 40780850 - 40780968
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||| ||||||| | ||||| ||||||||||  |||||||||||||| | ||||||||||||||||| ||||||| ||||| |||||||||||     
T  40780850 tttttttttgttttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttcccctt 40780949  T
Q  214 ga-aatcgaacccggtatt 231  Q
    || ||||||||||| ||||    
T  40780950 gagaatcgaacccgatatt 40780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 46108798 - 46108691
Alignment:
Q  129 gcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggt 228  Q
    ||||| ||||| |||||| ||| ||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||  ||  ||||||||    
T  46108798 gcatcggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcactagccaaatgttgttcccctggtgat--aacccggt 46108701  T
Q  229 attccccgga 238  Q
    ||| ||||||    
T  46108700 atttcccgga 46108691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 48834689 - 48834807
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||||||| | ||||| ||||||||||  || | ||||||||| ||||||||  |||||||||  ||||||||| ||| || ||||||||    
T  48834689 tttttttttgctttcgcaccggtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatgtgcactggcctagtattattcccctg 48834788  T
Q  214 gaaatcgaacccggtattc 232  Q
    |||||||||||||||||||    
T  48834789 gaaatcgaacccggtattc 48834807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 5472834 - 5472962
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcc 209  Q
    ||||||| | ||||||||||| ||||||  ||||||||||  |||| ||||||||| | ||| ||||||||||||| ||||||||||||| |||| ||||    
T  5472834 ttattttttgttgctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcc 5472933  T
Q  210 cctggaaatcgaacccggtattccccgga 238  Q
    ||||  |||| |||| |||||||||||||    
T  5472934 cctgagaatcaaacctggtattccccgga 5472962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 20354725 - 20354641
Alignment:
Q  148 caatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtatt 231  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||||||| ||||||||||| ||| |||||||    
T  20354725 caatagtggacgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatt 20354641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 38166144 - 38166024
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    ||||||||||||| | ||||| ||||||||||  |||| ||||||||| | ||| ||||||||| ||| ||||||||||||| |||||| ||||||| ||    
T  38166144 ttttgctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaa 38166045  T
Q  218 tcgaacccggtattccccgga 238  Q
    || ||||| ||||||||||||    
T  38166044 tccaacccagtattccccgga 38166024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 27248543 - 27248425
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaa 217  Q
    |||| ||||| || |||||||||||| |||||  |||| ||||||||||| ||| |||||||||||||  || ||||||||| |||||||| ||||| |     
T  27248543 tttttctttcacaccagtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcat--gcgctggccaagcgttgttcctcctgggac 27248446  T
Q  218 tcgaacccggtattccccgga 238  Q
    |||||||||||||||||||||    
T  27248445 tcgaacccggtattccccgga 27248425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 295550 - 295646
Alignment:
Q  142 acccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 238  Q
    |||||||||  ||||||||||||||||  || ||||||||||||| ||||||||||||  |||||||| |||| ||||||| | |||||||||||||    
T  295550 acccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttcctctgggaatcgaatctggtattccccgga 295646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 2559419 - 2559307
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaa 222  Q
    |||||||| | ||||| ||||||||||  |||||||| ||||| | ||  ||||||||||||| ||||||||||||| |||||||| ||| |||||||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaa 2559320  T
Q  223 cccggtattcccc 235  Q
     ||||||||||||    
T  2559319 tccggtattcccc 2559307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 29588858 - 29588734
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||| |||||||||||  |||| ||||||||||| |||||  ||||||| | ||| ||||||||||||| |||||| ||||||  ||| |||||||    
T  29588858 ttttttttagctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccct 29588759  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || |||||||||||||||| |||||    
T  29588758 gggaatcgaacccggtatttcccgg 29588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 53599182 - 53599058
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||| || |||| ||  ||| |||| ||||| | ||||||||||||||||| ||||||||||||  |||||||| |||    
T  53599182 ttttttttggctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcct 53599083  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  53599082 gggaatcgaacccggtattccccgg 53599058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 20532428 - 20532522
Alignment:
Q  144 ccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 237  Q
    |||||||  |||| ||||| ||| | ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||| ||||    
T  20532428 ccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctccgg 20532522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 42722576 - 42722690
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaa 222  Q
    |||||||| | ||||  ||||||| ||  ||| |||||||||| | ||||||||||||||||| ||||||||||||| |||||||| ||||| ||| |||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaa 42722675  T
Q  223 cccggtattccccgg 237  Q
    ||||||||| |||||    
T  42722676 cccggtatttcccgg 42722690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 43468459 - 43468345
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaa 222  Q
    |||||||| | || || ||||||||| | |||| ||||||||| | |||||||||||||  ||  |||||||||||| |||||| ||||||| |||||||    
T  43468459 ctttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaa 43468360  T
Q  223 cccggtattccccgg 237  Q
    |||||||||||||||    
T  43468359 cccggtattccccgg 43468345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 3574479 - 3574556
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccc 234  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||||||||    
T  3574479 cgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccc 3574556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 21429411 - 21429298
Alignment:
Q  126 ttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacc 224  Q
    |||||| | ||||| ||||||||||  ||||||||||| |||||||| ||||||||||||| ||||||||| ||  |||||| |||||  ||||||||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacc 21429312  T
Q  225 cggtattccccgga 238  Q
    || |||||| ||||    
T  21429311 cgatattcctcgga 21429298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 36145243 - 36145328
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 237  Q
    |||||||||||||| | |||||| |||||||||| |||||||  |||| |||||| ||||||| ||||||||||||||||||||||    
T  36145243 gtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgg 36145328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 8064826 - 8064906
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattc 232  Q
    |||||||||||||| | ||||||||||||||||| |||||||| |||||||| |||||| ||| |||||||||| ||||||    
T  8064826 gtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtattc 8064906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 10541137 - 10541018
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||||||||||||| | ||||| || ||| |||  |||| ||| ||||||| ||| ||||||||||||| | ||||||||||| |||| |||||||    
T  10541137 tttttttttgctttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccct 10541039  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    |||||||||||||| ||||||    
T  10541038 ggaaatcgaacccgatattcc 10541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 219
Target Start/End: Complemental strand, 15829811 - 15829715
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatc 219  Q
    |||||||| | |||||||| |||||||| ||||| |||||||| | ||||||| |||| |||| |||||||||||||||||| |||||||| |||||    
T  15829811 ctttcgcaccggtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatc 15829715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 17946602 - 17946490
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaa 222  Q
    ||||||||| | ||||  ||| |||||| ||||||| |||||||||||||||| ||||| |||| |||||||| ||||  ||||||||||| ||||||||    
T  17946602 gctttcgcaacggttttcgactcaccaaaagtggacaactaatctgactcatgtgtagaagcatgcgcactggtcaagaattgttcccctgaaaatcgaa 17946503  T
Q  223 cccggtattcccc 235  Q
     | | ||||||||    
T  17946502 tctgctattcccc 17946490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 24850616 - 24850740
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||||||||| ||||| || |||  ||| ||||| || |||||   ||||||||||||||||| |||||||| |||||||||||||||||    
T  24850616 tttttttttgctttcgcatcggtttccgatccaataatggtggatgaataatccagctcatgcgtagaggcatgcgcactggtcaagtgttgttcccctg 24850715  T
Q  214 gaaatcgaacccggtattccccgga 238  Q
      ||| ||| | |||||| ||||||    
T  24850716 ataattgaatctggtatttcccgga 24850740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 41339385 - 41339508
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||||||||||||| | |||| ||| |  ||||| |||| ||||||||| | ||| ||||||||||||||| ||||||||||| |||||||||| |    
T  41339385 tttttttttgctttcgcaccggttt-tgatctgccaatggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttcccctt 41339483  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || | ||||||||||||||| ||||    
T  41339484 gggagtcgaacccggtattctccgg 41339508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 48015062 - 48015182
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ct 212  Q
    |||| ||||||||||||| | ||||| || ||| ||| | ||| | ||||||| | ||| ||||||||||| | ||||||||||||| ||||||||| ||    
T  48015062 tttttttttgctttcgcaccggtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccact 48015161  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    || ||||||||||||||||||    
T  48015162 gggaatcgaacccggtattcc 48015182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 4738740 - 4738629
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||| ||||||||||  |||||||||||||    ||||||||||||| ||| ||||||||| ||| |||||||| |||    
T  4738740 ttttttttggctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttcctcct 4738641  T
Q  213 ggaaatcgaacc 224  Q
    ||||||||||||    
T  4738640 ggaaatcgaacc 4738629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 24166572 - 24166449
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||||||||||||| | ||||| || ||| |||  ||||  |||||||||| ||| ||||||||||||| ||||||||||||  |||| ||||| |    
T  24166572 tttttttttgctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttccctt 24166473  T
Q  213 ggaaatcgaacccggtattccccg 236  Q
    || |||||||||| ||||||||||    
T  24166472 gggaatcgaacccagtattccccg 24166449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 14124128 - 14124018
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaa 222  Q
    |||||||| | |||||  |||||||||| |||  ||||||||| | ||| || |||||||||| |||||||||||| ||||||| ||||||| |||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaa 14124029  T
Q  223 cccggtattcc 233  Q
    || ||||||||    
T  14124028 cctggtattcc 14124018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 26237417 - 26237491
Alignment:
Q  120 tttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactg 194  Q
    |||| ||||||||||||||| |||||| |||| |||||| ||||||| |||||||||||| || |||||||||||    
T  26237417 tttgttttcgcatcagtttccgacccatcaatggtggactactaatccgactcatgcgtaaagacatacgcactg 26237491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 3507372 - 3507268
Alignment:
Q  134 agtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcc 233  Q
    |||||| || |||||||  |||||||||||||| | ||| || |||||||||  |||||| |||||| ||||||||| ||| ||||||||||| |||||     
T  3507372 agtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgttcccttgggaatcgaacccgatattct 3507273  T
Q  234 ccgga 238  Q
    |||||    
T  3507272 ccgga 3507268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 49260676 - 49260752
Alignment:
Q  136 tttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccct 212  Q
    |||| ||||||||||  |||| ||||||||| | ||| ||||||||||||| ||||||||||||| |||||||||||    
T  49260676 tttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccct 49260752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 14858832 - 14858709
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||||||| | |||||||||||| |||  |||||||| ||||||||||| | ||||||| ||| |||||||| ||||  |  | ||||||    
T  14858832 ttttttttggctttcgcaccggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaagcttgatccccctg 14858733  T
Q  214 gaaatcgaacccggtattccccgg 237  Q
    | || |||||||||||||| ||||    
T  14858732 ggaaccgaacccggtattctccgg 14858709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 33647800 - 33647721
Alignment:
Q  157 acgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcccc 235  Q
    ||||||||||||  || |||||||||| ||  ||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  33647800 acgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccggtattcccc 33647721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 15732437 - 15732562
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||||||||||||| | ||||| || |||||||   ||  ||||||||||  | | |||||||||||||  ||||||||||||||||||||||| |    
T  15732437 tttttttttgctttcgcaccggtttccgatccaccaaagatgagcgactaatctagcccgtgcgtagaggcatgtgcactggccaagtgttgttccccat 15732536  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
       ||||||||||||||||| |||||    
T  15732537 atgaatcgaacccggtattctccgga 15732562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 15839968 - 15840045
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 235  Q
    ||||||||| | ||||||||||||||||| ||||||||||||  ||| |||  || | ||||||||||||||||||||    
T  15839968 cgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttattcttctaggaatcgaacccggtattcccc 15840045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 17080121 - 17080068
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||    
T  17080121 cgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccc 17080068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 30317345 - 30317232
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaa 222  Q
    ||||| |||| ||||| ||||||||||  |||| ||||||||  | ||| ||||||||||||| || |||||||||| ||||||||| |||  |||||||    
T  30317345 ctttcacatcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaa 30317246  T
Q  223 cccggtattccccg 236  Q
    || | |||||||||    
T  30317245 cctgatattccccg 30317232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 41162871 - 41162996
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ct 212  Q
    |||| ||||||||||||  || |||| || ||| |||  |||| ||||||||  | ||||||| |||| ||||   ||||||||||||||||||||| ||    
T  41162871 tttttttttgctttcgctccaatttccgatccatcaaaggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctct 41162970  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    ||||||||||| ||||||| ||||||    
T  41162971 ggaaatcgaactcggtatttcccgga 41162996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 13073649 - 13073541
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaac 223  Q
    ||||||| | ||||| ||||||||||  ||  ||||||||||||  ||||||||||||| || ||||||||||||   ||||||||| ||| ||||||||    
T  13073649 tttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaac 13073550  T
Q  224 ccggtattc 232  Q
     ||||||||    
T  13073549 tcggtattc 13073541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 31588798 - 31588722
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaag 200  Q
    |||||||||| ||||| || ||||||| ||||  ||||||||| | ||||||||||||| ||| |||||||||||||    
T  31588798 ctttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaag 31588722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 43458725 - 43458613
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaa 222  Q
    |||||||| | ||||| ||| || |||  |||||||||||||| | ||| | ||||||||||| ||||||||||||| ||| |||| ||||| |||||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaa 43458626  T
Q  223 cccggtattcccc 235  Q
     || |||||||||    
T  43458625 tccagtattcccc 43458613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 38168369 - 38168255
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcga 221  Q
    ||||||||| | |||||  |||||| ||  ||| |||||||||| | |||||||||||||||||  |||||||||||| |||||||| | | | ||||||    
T  38168369 gctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcat-ggcactggccaagcgttgttcctcttaggaatcga 38168271  T
Q  222 acccggtattccccgg 237  Q
    ||| ||||||||||||    
T  38168270 acctggtattccccgg 38168255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 26479994 - 26480060
Alignment:
Q  170 ctcatgcgtagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattcccc 235  Q
    ||||||||||||||||| || |||||||||||||| |||||||  | |||||||| |||||||||||    
T  26479994 ctcatgcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtattcccc 26480060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 37369041 - 37369127
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    |||||||||| ||||| ||  |||||||||||| ||||| ||| ||||| ||||||||||||| | |||||| |||  |||||||||    
T  37369041 ctttcgcatcggtttccgattcaccaatagtgggcgacttatccgactcgtgcgtagaggcatgcacactggacaaacgttgttccc 37369127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 18531641 - 18531544
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||| ||||||||| | ||||| ||||||| ||  |||||||| |||||||  || ||| | ||||||| ||||||| ||||||||||||||||    
T  18531641 ttttttttggctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactgaccaagtgttgttcccc 18531544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 21192762 - 21192646
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||||||| | ||||  ||| ||||||  |||| ||| ||||| ||||| ||||||||||||| |||||||||| |  |||||||| | |    
T  21192762 ttttttttggctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgttgttcctc-g 21192664  T
Q  214 gaaatcgaacccggtatt 231  Q
    ||| ||||||||||||||    
T  21192663 gaactcgaacccggtatt 21192646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 6862286 - 6862222
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 238  Q
    ||||||||| ||| ||||||| |||||| || |||| | || |||||||||||||||||||||||    
T  6862286 tgcgtagagacatgcgcactgaccaagtattattccacagggaatcgaacccggtattccccgga 6862222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 47682370 - 47682470
Alignment:
Q  113 attttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccct 212  Q
    ||||| ||||||||||||| | ||||| ||||||||||  |||| ||||||| | | ||| ||||||||| |||  |||||||||||  ||| |||||||    
T  47682370 atttttttttgctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgttattcccct 47682469  T
Q  213 g 213  Q
    |    
T  47682470 g 47682470  T

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Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 1940793 - 1940887
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||||  |||| ||||||||| | ||| ||||||||||||| |||||   ||||| |||||| ||||||| ||||||||||| |||| |||||    
T  1940793 gacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgg 1940887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 48317303 - 48317382
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtatt 231  Q
    |||| ||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||| |||| |||||||| || |||||    
T  48317303 gtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagtatt 48317382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 52209713 - 52209638
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    |||||||||||| ||||  || |||| |||||||||||||||||||| || | ||||||  ||||| |||||||||    
T  52209713 gtttctgacccatcaatgatgaacgattaatctgactcatgcgtagaagcgtgcgcactatccaagcgttgttccc 52209638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 50486065 - 50485971
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc 208  Q
    |||| ||| ||||| ||||| ||||| ||||||| ||| |||| ||||||||| | ||| ||||||||||||| ||  ||||||||  |||||||    
T  50486065 ttttttttggcttttgcatcggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcgttctggccaatcgttgttc 50485971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 7742007 - 7741954
Alignment:
Q  154 tggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    |||||||||||||||  || |||||||||||||  |||||||||||| ||||||    
T  7742007 tggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgtt 7741954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 9548843 - 9548739
Alignment:
Q  104 aatatgattattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgt 203  Q
    ||||| ||| |||| ||||||||| ||||||||||| || |||||||  ||| |||||||||||   || || | |||||||| ||||||  ||||| ||    
T  9548843 aatataattttttttttttgcttttgcatcagtttccgatccaccaacggtgaacgactaatctagttcgtgtgcagaggcatgcgcactaaccaagcgt 9548744  T
Q  204 tgttc 208  Q
    |||||    
T  9548743 tgttc 9548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 25406552 - 25406620
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagag 182  Q
    |||| ||| ||||||||| | ||||| |||||| |||  ||| ||||||||||||| ||||||||||||    
T  25406552 ttttttttggctttcgcaccggtttccgacccatcaaaggtgaacgactaatctgattcatgcgtagag 25406620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 45721169 - 45721085
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgtt-gttcccctggaaatcgaacccggtattccccg 236  Q
    |||||||||||||| ||||  ||||||||||||  |||| |||||||   ||  |||||||| |||| |||||||||||||||||    
T  45721169 gtggacgactaatccgacttgtgcgtagaggcacgcgcagtggccaaacattatttcccctgaaaatggaacccggtattccccg 45721085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 54946350 - 54946286
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaa 199  Q
    ||||| |||||||||||  ||| ||||||||| | ||||||||||||||||| || |||| ||||    
T  54946350 gtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcggactgaccaa 54946286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 3136684 - 3136807
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||||||| | ||||| |||| |||||  |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  3136684 ttttttttggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcccctg 3136783  T
Q  214 gaaatcgaacccggtattccccgg 237  Q
     |||||||| ||||||||||||||    
T  3136784 aaaatcgaatccggtattccccgg 3136807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 49198457 - 49198343
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaac 223  Q
    |||| |||| |||||||| |||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||    
T  49198457 tttcacatcggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaac 49198358  T
Q  224 ccggtattccccgga 238  Q
    |||||||||||||||    
T  49198357 ccggtattccccgga 49198343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 45877561 - 45877446
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaa 222  Q
    |||||||| | ||||| |||||| |||| ||| |||||||||| | |||||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaa 45877462  T
Q  223 cccggtattccccgga 238  Q
    ||||||||||||||||    
T  45877461 cccggtattccccgga 45877446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 29128036 - 29127914
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccct 212  Q
    |||| ||| ||||||||||| ||||| ||||||||||  |||| ||||||||| | ||||||||||||||||| ||||||| ||||||||||||| ||||    
T  29128036 ttttttttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccct 29127937  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    |||||||||||||| ||||||||    
T  29127936 ggaaatcgaacccgatattcccc 29127914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 35316068 - 35315949
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    |||| |||||||||| ||||| |||||||||| ||||| |||||||||   ||||||||||||||||| |||||||||||||||||||| ||||||| ||    
T  35316068 tttttctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaa 35315969  T
Q  218 tcgaacccggtattccccgg 237  Q
    ||||||||| ||||| ||||    
T  35315968 tcgaacccgatattctccgg 35315949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 29136002 - 29135905
Alignment:
Q  142 acccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 238  Q
    |||||||||| ||||| |||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  29136002 acccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccgga 29135905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 30767237 - 30767359
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||| ||||||||  |||||| ||||||||||  |||| ||||||||| | ||| ||||||||||||| | |||||||||||||||||| |||||    
T  30767237 tttttttttactttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccct 30767336  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    |||||||||||||| ||||||||    
T  30767337 ggaaatcgaacccgatattcccc 30767359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 47471938 - 47471828
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaac 223  Q
    |||||||||| ||||| ||||||||||  |||||||||||||  | |||||||||||| |||| |||||| ||||||  |||||||||||| ||||||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcccctgggaatcgaac 47471839  T
Q  224 ccggtattccc 234  Q
    |||||||||||    
T  47471838 ccggtattccc 47471828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 7650344 - 7650223
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | |||||  |||||||||  |||| ||||||||| | ||| ||||||||| ||| || ||||||||||||||||| |||||    
T  7650344 tttttttttgctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccct 7650245  T
Q  213 ggaaatcgaacccggtattccc 234  Q
    ||||||||||||||||||||||    
T  7650244 ggaaatcgaacccggtattccc 7650223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 51060271 - 51060396
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| ||||||||||| ||||||||||||||    |||||||||||||||| ||||||| |||||||||||| |||||    
T  51060271 ttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccct 51060370  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    |  ||||||||||| |||||||||||    
T  51060371 gagaatcgaacccgatattccccgga 51060396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 25295068 - 25294952
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcga 221  Q
    ||||||||| | |||||  |||||||||| |||||||||||||| | ||||||| ||||||||| |||||||||||||||||| |||||| |  |||| |    
T  25295068 gctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaa 25294969  T
Q  222 acccggtattccccgga 238  Q
    |||||||||||||||||    
T  25294968 acccggtattccccgga 25294952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 47749095 - 47749215
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||||||||| ||||| |||| |||||  |||| ||||||||  | ||| ||||||||||||| ||||||||||||| |||||||||||     
T  47749095 ttttttttggctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttccccta 47749194  T
Q  214 gaaatcgaacccggtattccc 234  Q
    | |||||||||||||||||||    
T  47749195 ggaatcgaacccggtattccc 47749215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 30045938 - 30045816
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||||||||||||  |||||  |||||| |||  |||||||||||||| ||||| ||||||||| ||| ||||||||||||| |||||| |||||    
T  30045938 tttttttttgctttcgcactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccct 30045839  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
     | ||||||||||||||||||||    
T  30045838 aggaatcgaacccggtattcccc 30045816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 114 - 227
Target Start/End: Original strand, 24506638 - 24506751
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||| ||| | ||||| ||||||||||| |||  |||||||||||||||||||||||||||||  ||||||| |||| |||||| |||||    
T  24506638 ttttttttggcttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtttccctg 24506737  T
Q  214 gaaatcgaacccgg 227  Q
     |||||||||||||    
T  24506738 aaaatcgaacccgg 24506751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 29762155 - 29762268
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaa 222  Q
    |||||||| | ||||| ||||||||||| ||||||||||||||   ||||||| ||||||||| |||||||||||||||||||| ||||||  ||||| |    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcgga 29762254  T
Q  223 cccggtattccccg 236  Q
    |||| |||||||||    
T  29762255 cccgatattccccg 29762268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 47219261 - 47219136
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||| ||||||||| | ||||| |||||| |||  |||||||||||||| | ||||||||||||||||| |||||| |||||| |||| ||||| |    
T  47219261 ttttctttggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttccctt 47219162  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || ||||||||| |||||||||||||    
T  47219161 gggaatcgaacctggtattccccgga 47219136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 7328960 - 7328837
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||  ||||||||||  |||| ||||||||| | |||||||||| |||||| |||||||||||||||||||| |||||    
T  7328960 ttttttttagctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccct 7328862  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || |||||||||||||||| |||||    
T  7328861 gggaatcgaacccggtatttcccgg 7328837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 15320303 - 15320179
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||||||||||||||  |||| ||||||||| | ||| ||||||||||||| | ||||||||||   ||||||| |||    
T  15320303 ttttttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcct 15320204  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
     ||||||||||||||||||||||||    
T  15320203 cgaaatcgaacccggtattccccgg 15320179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 26043908 - 26043812
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtat 230  Q
    ||||||||| ||||||  |||  ||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  26043908 gtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 237
Target Start/End: Original strand, 26207787 - 26207915
Alignment:
Q  111 ttattttgttttgctt-tcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc 209  Q
    ||||||| ||||| || ||||| | ||||| ||||||| |||| ||| ||||||||| | ||||||||||||||||| | |||||| |||| ||||||||    
T  26207787 ttatttttttttggttgtcgcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttcc 26207886  T
Q  210 cc-tggaaatcgaacccggtattccccgg 237  Q
    || ||| ||||||||||||||||||||||    
T  26207887 ccgtgggaatcgaacccggtattccccgg 26207915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 54261333 - 54261221
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaa 222  Q
    |||||||| | ||||| ||||||| ||  ||| |||||||||| | ||||||||||||||||| ||||||||||||| |||||||| ||| | |||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 54261234  T
Q  223 cccggtattcccc 235  Q
    |||||||||||||    
T  54261233 cccggtattcccc 54261221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 6462518 - 6462407
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaac 223  Q
    ||||||| | |||||  |||||| |||| ||| ||||||||| | ||||||||||||||||| ||||||||||||| ||||||| |||||  ||||||||    
T  6462518 tttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaac 6462419  T
Q  224 ccggtattcccc 235  Q
    ||||||||||||    
T  6462418 ccggtattcccc 6462407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 45402350 - 45402465
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcga 221  Q
    |||| |||||||||||| ||||||| ||  ||| |||||||||| | ||||||||||||||||| ||||| |||| |||||||||||| || | ||||||    
T  45402350 gcttgcgcatcagtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcga 45402449  T
Q  222 acccggtattccccgg 237  Q
    ||||| ||||||||||    
T  45402450 acccgatattccccgg 45402465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 48342132 - 48342015
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    ||||||||||||| | ||||| || |||||||   |||||||||||||||  |||||||||||||||| |||||| |||||| |||||| ||||| | ||    
T  48342132 ttttgctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaa 48342033  T
Q  218 tcgaacccggtattcccc 235  Q
    | ||||||||||||||||    
T  48342032 tagaacccggtattcccc 48342015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 28572201 - 28572325
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||| ||||||||| | ||||| ||||||||||  |||| ||||||||| | ||| ||||||||||||| |  |||||||||| |||| |||||||    
T  28572201 ttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccct 28572300  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || |||||||||| |||||||||||    
T  28572301 gggaatcgaacccagtattccccgg 28572325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 54237556 - 54237440
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcga 221  Q
    ||||||||| | ||||| ||||||| ||| |||||||||| ||| | ||||||||||||| ||| ||||||| ||||||||||||| ||||| |||||||    
T  54237556 gctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttctccctgaaaatcga 54237457  T
Q  222 acccggtattccccgga 238  Q
     |||| |||| ||||||    
T  54237456 ccccgatatttcccgga 54237440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 10040645 - 10040550
Alignment:
Q  142 acccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 237  Q
    |||||||||  ||||||||| | || | ||| ||||||||||||| ||||||||||||| ||||||||||||  ||||||||||| ||||||||||    
T  10040645 acccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctgagaatcgaacccgatattccccgg 10040550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 15795484 - 15795607
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||| ||| | ||||  ||||||||| | |||| ||||||||    ||| ||||||||||||| ||||||| ||||| ||||||||||||    
T  15795484 tttttttttgcttttgcaccggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttcccctg 15795583  T
Q  214 gaaatcgaacccggtattccccgg 237  Q
    | |||||||| |||||||||||||    
T  15795584 ggaatcgaactcggtattccccgg 15795607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 3507534 - 3507644
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaac 223  Q
    ||||||| | ||||| ||||||||||  |||  ||||||||| | ||| ||||||||||||| ||||||||||||||||||||||| || | |||| |||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaac 3507633  T
Q  224 ccggtattccc 234  Q
    |||||||||||    
T  3507634 ccggtattccc 3507644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 33689040 - 33688970
Alignment:
Q  142 acccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccct 212  Q
    |||||||||| ||||| |||||| ||| ||||||||||||||||| ||||||||||||||||| |||||||    
T  33689040 acccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattcccct 33688970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 49021193 - 49021274
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactgg 195  Q
    |||| ||| ||||||||| | ||||| ||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||    
T  49021193 ttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 7310693 - 7310813
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ct 212  Q
    |||| ||| ||||||||||| ||||| ||||||||||   ||  ||||||||| | ||| ||||||||||||| | ||| || |||||||||||||| ||    
T  7310693 ttttttttggctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccact 7310792  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    || ||||||||||||||||||    
T  7310793 gggaatcgaacccggtattcc 7310813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 8164640 - 8164548
Alignment:
Q  144 ccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 235  Q
    |||||||  |||| ||||||||| ||||| |||||| |||||| ||||||||||||| |||||||||| | ||||| ||||||||||||||||    
T  8164640 ccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtattcccc 8164548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 31072995 - 31072871
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | |||||  ||| |||||  |||||||| |||||||  || |||||||||||||  |||||| ||||| |||||| |||||    
T  31072995 tttttttttgctttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccct 31072896  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    |||||||||||| ||||||| ||||    
T  31072895 ggaaatcgaacctggtattctccgg 31072871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 53649801 - 53649721
Alignment:
Q  157 acgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccg 236  Q
    |||||||||| | ||||||||||||| ||  ||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  53649801 acgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccggtattccccg 53649721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 33251740 - 33251657
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcccc 235  Q
    |||||||||||||| | ||||||||||||||||| | ||||||||||  ||||||||| | || ||||||||||||||||||||    
T  33251740 gtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccc 33251657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 45450476 - 45450555
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattc 232  Q
    |||||||||||||||  || |||||||||||||| |||||||| ||||  ||||||||||||||||| ||||| ||||||    
T  45450476 gtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaagcattgttcccctggaaatcaaacccagtattc 45450555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 50405614 - 50405705
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaaccc 225  Q
    ||||| ||||||||||| |||| ||||||||| ||||| ||||||||||||| |||||||| |||| |||| ||||||| | ||||||||||    
T  50405614 gtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 35998570 - 35998684
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaa 222  Q
    ||||||||| | ||||||||||||| ||  |||||||| |||||  |||| |||||||||||||  ||||||  |||| |||||| |||| |||||| ||    
T  35998570 gctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgttgtttccctcgaaatcaaa 35998669  T
Q  223 cccggtattccccgg 237  Q
    |||||||||| ||||    
T  35998670 cccggtattctccgg 35998684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 41630502 - 41630620
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||| |||||| || ||||||| |||| |||||  |||| ||||||||| | |||||| |||||||||| |||||||| |||| |||||||||| |    
T  41630502 ttttttttggctttcacaccagtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttcccctt 41630601  T
Q  213 ggaaatcgaacccggtatt 231  Q
    || ||| ||||||||||||    
T  41630602 gggaattgaacccggtatt 41630620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 13894043 - 13893918
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||| ||||||||| | ||||  || |||||||  |||| ||||||||| | ||| || |||||||||| |||| || ||||| |||||||||| |    
T  13894043 ttttttttggctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccct 13893944  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    ||||||| ||||||||||||||||||    
T  13893943 ggaaatccaacccggtattccccgga 13893918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 39849149 - 39849076
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccg 226  Q
    |||| ||||||||| | ||||||||||||||||| | ||||||||||| |||||||| |||| |||||||||||    
T  39849149 gtgggcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttcctctgggaatcgaacccg 39849076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 42412808 - 42412889
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 238  Q
    ||||||||| | |||||||||||||||||  ||||| |||||| |||||| |||| || |||||||||||||||||||||||    
T  42412808 cgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccgga 42412889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 8362655 - 8362571
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccg 236  Q
    ||||||||||||| || ||||||||||||||||| || |||||||||  |||| |||| |||| ||| |||||||||||||||||    
T  8362655 gtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccggtattccccg 8362571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 51682965 - 51683069
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcc 233  Q
    ||||| ||||||||| | |||| ||||||||| | ||| || | |||||||| |||||||| |||| |||||||||| ||| ||||||||| ||||||||    
T  51682965 gtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattcc 51683064  T
Q  234 ccgga 238  Q
    |||||    
T  51683065 ccgga 51683069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 11687144 - 11687218
Alignment:
Q  159 gactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 232  Q
    |||||||||||||||| ||||||||||| |||||||||||||  ||||| ||||||  |||| ||||||||||||    
T  11687144 gactaatctgactcatacgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattc 11687218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 43330722 - 43330815
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    |||| ||| ||||||| | | |||| |||||||||||  |||| ||||||||| | ||| ||||||||||||| |||||||| |||||||||||    
T  43330722 ttttttttggctttcgtaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtt 43330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 19147073 - 19146969
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaa 217  Q
    |||| |||||||| | ||||| ||||||||||  ||||||||||||||   ||| ||| |||||| |||| ||||||||||| |||||||| |||| |||    
T  19147073 tttttctttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctgaaaa 19146974  T
Q  218 tcgaa 222  Q
    |||||    
T  19146973 tcgaa 19146969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 23511676 - 23511564
Alignment:
Q  122 tgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcg 220  Q
    |||||||||| | ||||  |||||| |||  |||||||| ||||| ||||||||||||||||||| |||||||| |||  |||| ||||| ||  |||||    
T  23511676 tgctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttgctccccttgtgaatcg 23511577  T
Q  221 aacccggtattcc 233  Q
    |||||| ||||||    
T  23511576 aacccgatattcc 23511564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 49082896 - 49082816
Alignment:
Q  159 gactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||| || || ||||| |||| ||||||||| ||| ||||||| |||||| |||||||| ||||||||||||||    
T  49082896 gactaatctgattcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccgga 49082816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 3755645 - 3755562
Alignment:
Q  156 gacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||| | ||||||||||||| ||| |||||||| |||  |||||||| ||||| |||||||  ||||||||||||||    
T  3755645 gacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccgga 3755562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 10855441 - 10855383
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtatt 231  Q
    ||||||||||||| || |||||||||| |||||| |||||||||||| |||||||||||    
T  10855441 tgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatt 10855383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 32873578 - 32873660
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccc 234  Q
    |||| ||||||||||| ||||| |||||||||||  ||||||| |||| ||||||| |||| | ||||||||| |||||||||    
T  32873578 gtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattccc 32873660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 19873497 - 19873361
Alignment:
Q  106 tatgattattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagagg------catacgcactggccaa 199  Q
    ||||| |||||| ||| ||||| ||| ||||||| ||||||| ||   ||||||||||||| | ||| ||||||||||      ||| ||||||||||||    
T  19873497 tatgaatattttttttggcttttgcaccagtttccgacccacaaaagatggacgactaatccggctcgtgcgtagaggtagaggcatgcgcactggccaa 19873398  T
Q  200 gtgttgttcccctggaaatcgaacccggtattccccg 236  Q
    |  ||||||| |||| |||| |||| |||||||||||    
T  19873397 gcattgttcctctgggaatcaaacctggtattccccg 19873361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 49543636 - 49543515
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||||||||||| | ||||||| ||||||| ||  |||| ||||||||  | ||| ||||||||||||| | ||||| ||||  |||||||||| |    
T  49543636 tttttttttgctttcgtaccagtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccat 49543537  T
Q  213 ggaaatcgaacccggtattccc 234  Q
    |  ||||||||||| |||||||    
T  49543536 gagaatcgaacccgatattccc 49543515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 52168554 - 52168671
Alignment:
Q  108 tgattattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    ||||| |||| ||||||||| ||||| ||||  |||||| |||| ||| |||||||||| | |||||| || | ||||| |||| |||||||   |||||    
T  52168554 tgattttttttttttgctttagcatcggttttcgacccatcaattgtgaacgactaatccggctcatgtgttggggcatgcgcattggccaaacattgtt 52168653  T
Q  208 c-ccctggaaatcgaacc 224  Q
    | ||||||||||||||||    
T  52168654 caccctggaaatcgaacc 52168671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 26923251 - 26923331
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactg 194  Q
    |||| ||||||||||||| | |||||||||||||||||| ||||| | ||||| ||||| || ||| | |||| |||||||    
T  26923251 tttttttttgctttcgcaccggtttctgacccaccaataatggacaattaatccgactcgtgtgtatatgcatgcgcactg 26923331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 40660374 - 40660442
Alignment:
Q  171 tcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 238  Q
    |||||||||||||||| ||||||| |||| ||||||||| ||| | ||||||| |||||||| ||||||    
T  40660374 tcatgcgtagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaatccggtatttcccgga 40660442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 40944976 - 40944881
Alignment:
Q  137 ttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 232  Q
    ||||||||||||||  |||  ||||||||| | ||||||||||||||||| |  |||||  |||||||||| ||||||| |||||||| ||||||||    
T  40944976 ttctgacccaccaaaggtgagcgactaatccg-ctcatgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattc 40944881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 47303521 - 47303597
Alignment:
Q  156 gacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtatt 231  Q
    ||||||||||| | |||||| ||||||||||  |||||| |||||||||||||| ||||| |||| |||||| ||||    
T  47303521 gacgactaatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatatt 47303597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 50753331 - 50753403
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcat 186  Q
    |||| ||||||||| ||| | ||||| |||||||||||  || |||||||||| ||||| |||||||||||||    
T  50753331 tttttttttgcttttgcaccggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcat 50753403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 52364850 - 52364914
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 237  Q
    ||||||||||||| |||||||| |||| ||||||||  |||| |||||||| |||||||||||||    
T  52364850 tgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgg 52364914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 10043794 - 10043727
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcat 186  Q
    ||||||||||||| | ||||| ||||||||||| |||  ||| ||||||| ||| |||||||||||||    
T  10043794 ttttgctttcgcaccggtttccgacccaccaatggtgagcgattaatctgcctcgtgcgtagaggcat 10043727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 928678 - 928620
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||| |||||||| | ||| ||||||| ||||| |||||||| |||||||||||||||    
T  928678 gtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttcccc 928620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 11025438 - 11025484
Alignment:
Q  189 gcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 235  Q
    |||||||||||||||||| ||||| | ||||||||| ||||||||||    
T  11025438 gcactggccaagtgttgtccccctcggaatcgaacctggtattcccc 11025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 28242360 - 28242270
Alignment:
Q  149 aatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 238  Q
    |||||||  ||||||||| | ||||||| |||||||||  |||||||||||   ||||||| ||||| |||| |||||||||||| |||||    
T  28242360 aatagtgtgcgactaatccgcctcatgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattctccgga 28242270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 32522075 - 32522005
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg 205  Q
    ||||| |||||| |||  ||||||||||||||||||||||||||| |  ||| ||||| || |||||||||    
T  32522075 gtttccgacccatcaaaggtggacgactaatctgactcatgcgtaaatacatgcgcaccggtcaagtgttg 32522005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 2668118 - 2668085
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    ||||||||||||| ||||||||||||||||||||    
T  2668118 tgcgtagaggcatgcgcactggccaagtgttgtt 2668085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 25515749 - 25515858
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacc 224  Q
    ||||||||||||||| || |||| ||| |||  |||||||||  |||||| |||||| ||||   |||| |||||   |||||||||| | ||| |||||    
T  25515749 tttcgcatcagtttccgatccactaatggtgagcgactaatccaactcatacgtagaagcatgtacactagccaaacattgttcccctagtaatagaacc 25515848  T
Q  225 cggtattccc 234  Q
    ||||||||||    
T  25515849 cggtattccc 25515858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 34374476 - 34374525
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    ||||||||| |||| |||||| ||||||| ||||||| ||||||||||||    
T  34374476 cgactaatccgacttatgcgttgaggcatgcgcactgaccaagtgttgtt 34374525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 35923653 - 35923710
Alignment:
Q  154 tggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||||||||||  ||||| ||| ||||||||| ||||||||||||  ||||||||||    
T  35923653 tggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttcccc 35923710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 46798039 - 46797978
Alignment:
Q  120 tttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtaga 181  Q
    |||| |||||||||||| || |||||| |||  |||||| |||| |||||||||||||||||    
T  46798039 tttgttttcgcatcagtctcagacccatcaaaggtggacaactagtctgactcatgcgtaga 46797978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 7612990 - 7613038
Alignment:
Q  188 cgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 235  Q
    |||||| |||||| |||||||||| ||| ||||||||||||||||||||    
T  7612990 cgcactagccaagcgttgttccccctgggaatcgaacccggtattcccc 7613038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 41223076 - 41223140
Alignment:
Q  162 taatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccg 226  Q
    ||||| |||| |||||||||||||| |||| |||||||  |||||| |||||  |||||||||||    
T  41223076 taatcagacttatgcgtagaggcatgcgcattggccaaacgttgtttccctgataatcgaacccg 41223140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 55069669 - 55069765
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    |||| ||||||||| ||| | ||||| ||||||||||  |||  ||| ||||| | ||| |||||||||||||  |||||||||||  |||||||||    
T  55069669 tttttttttgcttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccc 55069765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 12864341 - 12864218
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||| |||||||| | ||||| ||||||||||| |||||||||||||||| |||||||| |||||||| ||||||| |||||||||||| |||||    
T  12864341 tttttttttactttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccct 12864242  T
Q  213 ggaaatcgaacccggtattccccg 236  Q
    |||||||||| |||||||||||||    
T  12864241 ggaaatcgaatccggtattccccg 12864218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 38962870 - 38962755
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaa 222  Q
    |||||||| ||||||||||||||||||  |||||||||||||| |  |||||||||||||||| ||||||||||||| |||||||| |||| ||||||||    
T  38962870 ctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaa 38962771  T
Q  223 cccggtattccccgga 238  Q
    ||||||||||||||||    
T  38962770 cccggtattccccgga 38962755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 6358167 - 6358265
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  6358167 gacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccgga 6358265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 16325712 - 16325602
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| ||||||||||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  16325712 tttttttttgctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccct 16325613  T
Q  213 ggaaatcgaac 223  Q
    || ||||||||    
T  16325612 gggaatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 35946855 - 35946731
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| |||| |||||||| ||||||| ||||||||||| |||||||||||||| | ||| ||||||||||||| | || |||||||| |||||||||||     
T  35946855 tttttttttcctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttccccta 35946756  T
Q  214 gaaatcgaacccggtattccccgga 238  Q
    | |||||||| ||||||||||||||    
T  35946755 ggaatcgaactcggtattccccgga 35946731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 12455427 - 12455303
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||| ||||||||| | ||||| ||||||||||| |||  ||||||||| | ||| ||||||||||||| ||||||||| ||| |||| |||||||    
T  12455427 ttttttttggctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccct 12455328  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    |||||||||||||||||||||||||    
T  12455327 ggaaatcgaacccggtattccccgg 12455303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 14169598 - 14169721
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| |||| |||||||| | ||||| ||||||||||| || ||||||||||| | ||||||||||||| ||| |||||||| ||||||||||||||| |    
T  14169598 tttttttttactttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccg 14169697  T
Q  214 ga-aatcgaacccggtattccccg 236  Q
    || ||||||||||| |||||||||    
T  14169698 gagaatcgaacccgatattccccg 14169721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 25540385 - 25540515
Alignment:
Q  105 atatgattattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgtt 204  Q
    |||| |||||||| ||||||||||||| | ||||| ||||||||||  |||||||||||||| | ||| ||||||||||||| ||||||||||||| |||    
T  25540385 atattattatttt-ttttgctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 25540483  T
Q  205 gtt-cccctggaaatcgaacccggtattcccc 235  Q
    ||| ||||| | |||||||||| |||||||||    
T  25540484 gttccccctaggaatcgaacccagtattcccc 25540515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 33005868 - 33005749
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| |||| |||||||||| ||||| ||||||| ||  |||  ||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  33005868 ttttttttttctttcgcatcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaagtgttgttcccctg 33005769  T
Q  214 gaaatcgaacccggtattcc 233  Q
    | ||  ||||||||||||||    
T  33005768 ggaacagaacccggtattcc 33005749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 44139601 - 44139479
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| ||||||||| | |||| ||||||||| | ||| ||||||||||||  ||||||||||||| |||||| |||||    
T  44139601 tttttttttgctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccct 44139502  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    || ||||||||||||||||||||    
T  44139501 gggaatcgaacccggtattcccc 44139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 3643876 - 3644001
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||||||||||||| | ||||| | ||||||||  ||||||||||||||   ||||||||||||||||| ||||||||||||| |||||||| | |    
T  3643876 tttttttttgctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgt 3643975  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
     |||||| ||||||||||||||||||    
T  3643976 agaaatcaaacccggtattccccgga 3644001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 20612520 - 20612648
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatct-gactcatgcgtagaggcatacgcactggccaagtgttgttcc 209  Q
    ||||||| ||| | ||||||| | ||||| ||||||||||| ||||||||||||||  | ||||||| ||||||||| ||||||||||||||||||||||    
T  20612520 ttattttttttggttttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttcc 20612619  T
Q  210 --cctggaaatcgaacccggtattccccg 236  Q
      ||||  |||||||||||||||||||||    
T  20612620 ctcctgagaatcgaacccggtattccccg 20612648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 331590 - 331494
Alignment:
Q  142 acccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 237  Q
    |||||||||  |||| ||||||||| | |||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  331590 acccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgg 331494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 3811680 - 3811800
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ct 212  Q
    |||| ||| ||||||||||| ||||||||||||||||  |||| ||| ||||| | ||||||||||||||||| |||| || ||||||||||||||| ||    
T  3811680 ttttttttggctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctct 3811779  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    || ||||||||||| ||||||    
T  3811780 gggaatcgaacccgatattcc 3811800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 8410248 - 8410124
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| ||||| |||| ||||| ||||||||| | ||| ||||||||||||| |||||||||||||||||||| |||||    
T  8410248 ttttttttggctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccct 8410149  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||| ||||| ||||    
T  8410148 gggaatcgaacccgatattctccgg 8410124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 28616365 - 28616493
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cc 209  Q
    ||||||| ||||||||||||| | ||||||||||||| ||   ||| ||||||||||| ||| ||||||||||||| ||||||| ||||||||| || ||    
T  28616365 ttatttttttttgctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccc 28616464  T
Q  210 cctggaaatcgaacccggtattccccgga 238  Q
    |||| |||||||||||| |||||| ||||    
T  28616465 cctgaaaatcgaacccgatattccgcgga 28616493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 38005519 - 38005395
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||| ||||||||| ||||||| || |||||||  |||| ||||||||| | |||||| |||||||||| ||||||||||||| |||||||||| |    
T  38005519 ttttttttggctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttcccctt 38005420  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || |||||||||| |||||||||||    
T  38005419 gggaatcgaacccagtattccccgg 38005395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 41220752 - 41220628
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||| ||||||| ||  ||| |||||||||  | ||||||||||||||||| ||||||||||||| |||||||| |||    
T  41220752 ttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcct 41220653  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  41220652 gggaatcgaacccggtattccccgg 41220628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 2550957 - 2550860
Alignment:
Q  142 acccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 238  Q
    ||||||||| ||||| ||||||||| | ||||||||||||| ||| ||||||||| |||||||||||| ||||| ||||||||||| |||||||||||    
T  2550957 acccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccgga 2550860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 2785038 - 2784925
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacc 224  Q
    ||||||| | ||||| ||| || ||||  ||||||||||||||||||||||||||||||||| ||||||| |||| | ||||| ||||| |||||||||     
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtttccctgaaaatcgaact 2784939  T
Q  225 cggtattccccgga 238  Q
    ||||||||| ||||    
T  2784938 cggtattcctcgga 2784925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 34356302 - 34356201
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 233  Q
    ||||| |||||| |||| ||| |||| ||||| | ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  34356302 gtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattcc 34356203  T
Q  234 cc 235  Q
    ||    
T  34356202 cc 34356201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 10823177 - 10823053
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||| ||||||| ||  |||| ||||||||| | ||| ||||||||||||| ||||||||||||| |||||||| |||    
T  10823177 ttttttttggctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcct 10823078  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || |||| |||||||||||||||||    
T  10823077 gggaatcaaacccggtattccccgg 10823053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 18902526 - 18902642
Alignment:
Q  121 ttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatc 219  Q
    ||||||||||| | ||||| ||||||||||  |||| ||||||||||| ||| ||||||||| ||  |||||||| |||| |||||||||| ||| ||||    
T  18902526 ttgctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatc 18902625  T
Q  220 gaacccggtattccccg 236  Q
    |||||||||||||||||    
T  18902626 gaacccggtattccccg 18902642  T

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Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 10026605 - 10026723
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||||||||| ||  |||||| ||||||||||  |||| ||||||||| | ||||||||||||||||| ||||||||||||  |||||| |||||    
T  10026605 tttttttttgctttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccct 10026704  T
Q  213 ggaaatcgaacccggtatt 231  Q
    |  ||||||||||||||||    
T  10026705 gagaatcgaacccggtatt 10026723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 34346276 - 34346398
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| ||||||||||  |||  ||| ||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  34346276 ttttttttggctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttccccct 34346375  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    |  |||| ||||| |||||||||    
T  34346376 gataatcaaacccagtattcccc 34346398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 7747391 - 7747266
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||| ||||||| ||  ||| |||||||||| | ||||||||||||||||| | ||||||||||  |||||||| |||    
T  7747391 ttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcct 7747292  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
     | |||||||||||||||||||||||    
T  7747291 aggaatcgaacccggtattccccgga 7747266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 7787129 - 7787049
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 237  Q
    ||||||||| | ||| ||||||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  7787129 cgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccgg 7787049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 11069990 - 11069871
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    ||||||||||||||| ||||| ||||||||||  |||||||||||||    ||| |||||||||| || ||||||||||||  |||||| ||||| | ||    
T  11069990 ttttgctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaa 11069891  T
Q  218 tcgaacccggtattccccgg 237  Q
    ||||||| ||||||||||||    
T  11069890 tcgaacctggtattccccgg 11069871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13026398 - 13026521
Alignment:
Q  112 tattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-c 210  Q
    |||||| ||| ||||| ||||| |||||||||| ||||| |||||  |||||||| | ||||||||||||||||| ||||||||||||   ||||||| |    
T  13026398 tattttttttggcttttgcatcggtttctgacctaccaaaagtggctgactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctc 13026497  T
Q  211 ctggaaatcgaacccggtattccc 234  Q
    |||  ||||||||||| |||||||    
T  13026498 ctgataatcgaacccgatattccc 13026521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 29422335 - 29422208
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    ||||||| ||||||||||||| |  |||| || ||| |||  |||||||||||||| | ||| |||||| ||| || | || ||||||||||||||||||    
T  29422335 ttatttttttttgctttcgcaccgatttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccc 29422236  T
Q  211 -ctggaaatcgaacccggtattccccgg 237  Q
     ||||||||||||||| |||||||||||    
T  29422235 tctggaaatcgaacccagtattccccgg 29422208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 18649014 - 18649136
Alignment:
Q  113 attttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cc 211  Q
    ||||| |||| |||||||| | |||||  ||||||||| ||||  ||||||||| ||||||||||||||||||| ||||||| |||| | ||||||| ||    
T  18649014 attttttttttctttcgcaacggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcc 18649113  T
Q  212 tggaaatcgaacccggtattccc 234  Q
    ||  ||||||| |||||||||||    
T  18649114 tgagaatcgaatccggtattccc 18649136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 22593224 - 22593128
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||||  |||||||||||||| | ||||||||||||||||| ||||||||||||  |||||| ||||||| |||||||| | |||||||||||    
T  22593224 gacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgg 22593128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 41031895 - 41032016
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| |||||||||   ||||| ||||||||||  ||||  |||||||| | ||| ||||||||||||| | |||||||||||||||||| |||||    
T  41031895 ttttttttagctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccct 41031994  T
Q  213 ggaaatcgaacccggtattccc 234  Q
    || ||||||||||||| |||||    
T  41031995 gggaatcgaacccggtgttccc 41032016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 45263716 - 45263781
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  45263716 tgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgga 45263781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 28525444 - 28525554
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt--cccc 211  Q
    |||| ||| |||||| || ||||||| ||||||  ||  ||||| |||||||| | ||| ||||||||||||| ||||||||||||||||||||  ||||    
T  28525444 ttttttttggctttcacaccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccccc 28525543  T
Q  212 tggaaatcgaa 222  Q
    |||||||||||    
T  28525544 tggaaatcgaa 28525554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 39806884 - 39806998
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaa 222  Q
    |||||||| | |||| ||| |||||||  ||||| |||||||| ||||| || |||||||||| ||||||||||||  |||| ||| | ||| |||||||    
T  39806884 ctttcgcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaa 39806983  T
Q  223 cccggtattccccgg 237  Q
    |||||||||||||||    
T  39806984 cccggtattccccgg 39806998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 42770645 - 42770758
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    ||||||||| ||||| ||||  ||||||||||  |||||||| ||||| | ||| |||| |||||||| ||||||||||||| |||||| ||||||  ||    
T  42770645 ttttgcttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaa 42770744  T
Q  218 tcgaacccggtatt 231  Q
    | ||||||||||||    
T  42770745 ttgaacccggtatt 42770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 14853394 - 14853481
Alignment:
Q  154 tggacgactaatctgactcatgcgtagag--gcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||||| |||||||| ||||||  |||||||||||||||||  |||||| |||||| |||||||| | |||||||||||||    
T  14853394 tggacgactaatccgactcatgagtagagaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccgga 14853481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 15234050 - 15234174
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||||| ||||| |||| | |||   || ||||||||||| |||  ||||||||||||| |||||||| ||||||||||| |||||    
T  15234050 ttttttttggctttcgcatcggtttccgacctatcaaagatgaacgactaatctaacttgtgcgtagaggcatgcgcactggtcaagtgttgttccccct 15234149  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    |  |||||||||  |||||||||||    
T  15234150 gagaatcgaacctagtattccccgg 15234174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 10669688 - 10669593
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggta 229  Q
    ||||| ||||||||||  ||| |||| ||||| ||||| ||||||||| ||| ||||||||||||| ||||||| |||||| |||| |||||||||    
T  10669688 gtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccggta 10669593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 15079606 - 15079476
Alignment:
Q  108 tgattattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    ||||| |||| | ||||||| ||| | |||||| | |||||  |||| | |||||||| || ||| ||||||||| ||| | |||||| |||| ||||||    
T  15079606 tgatttttttttgttgcttttgcaccggtttctaatccacctttagtaggcgactaatttggctcgtgcgtagagtcatgcacactggtcaagcgttgtt 15079507  T
Q  208 cccc-tggaaatcgaacccggtattccccgg 237  Q
    |||| |||||||||||||| |||||||||||    
T  15079506 ccccctggaaatcgaaccctgtattccccgg 15079476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 24179645 - 24179575
Alignment:
Q  154 tggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacc 224  Q
    ||||||||||||| | |||||||||||||||||  |||||||||||  ||||||||||||  |||||||||    
T  24179645 tggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcccctgagaatcgaacc 24179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 37804880 - 37804998
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||| ||  ||||| |||||| |||| |||| | || |||||||||||||||||| ||||| |||||| |||||| ||| || |||||    
T  37804880 tttttttttgctttcgtattggtttccgacccatcaatggtgggcaacaaatctgactcatgcgtagcggcatgcgcactagccaagcgttattccccct 37804979  T
Q  213 ggaaatcgaacccggtatt 231  Q
    |  ||||||| ||||||||    
T  37804980 gtgaatcgaatccggtatt 37804998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 10046486 - 10046590
Alignment:
Q  134 agtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattc 232  Q
    |||||| ||||||||||  |||| ||||||||| | ||||||||||||||||| |||||| | |||  |||||| |||| || |||||||||||||||||    
T  10046486 agtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcact-gtcaaacgttgtttcccttgagaatcgaacccggtattc 10046584  T
Q  233 cccgga 238  Q
     |||||    
T  10046585 tccgga 10046590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 21286501 - 21286436
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||||| |||||||| |||| |||||| | ||||| |||||||||||||||||||||||    
T  21286501 tgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccgga 21286436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 3848903 - 3849022
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||| |||||||| || |||  |||||| |||  ||| |||||||||| ||||| ||||||||| ||| ||| ||||||||  |||||| |||||    
T  3848903 tttttttttactttcgcaccaattttcgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccct 3849002  T
Q  213 ggaaatcgaacccggtattc 232  Q
    |  |||||||||||||||||    
T  3849003 gataatcgaacccggtattc 3849022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 21180347 - 21180422
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattc 232  Q
    ||||||||| | ||| |||||||||||||  |||||||||||||||||||| || ||| ||||||| |||||||||    
T  21180347 cgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattc 21180422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 19976835 - 19976921
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 238  Q
    |||| ||||||||  |||| |||||||||| ||| ||||||| ||||  ||| |||||| || ||||||||||||||||||||||||    
T  19976835 gtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccgga 19976921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 20116610 - 20116696
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc 209  Q
    ||||||||| | ||||| |||||| |||  ||||||| |||||| | ||||||||||||||||| |||| |||||| | ||||||||    
T  20116610 gctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttcc 20116696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 25604656 - 25604594
Alignment:
Q  169 actcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 231  Q
    |||||||||||||||||| |  ||||| |||  ||||||||||||||||||||| ||||||||    
T  25604656 actcatgcgtagaggcatgcatactggtcaaacgttgttcccctggaaatcgaatccggtatt 25604594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 29421394 - 29421285
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaat 218  Q
    |||||||||||||   ||||| || | |||||  || |||||||| |  ||||||||||||||||||| | ||||| ||||| ||||||||||| |||||    
T  29421394 ttttgctttcgcactggtttccgatctaccaaatgtagacgactacttcgactcatgcgtagaggcatgctcactgcccaagcgttgttcccct-gaaat 29421296  T
Q  219 cgaacccggta 229  Q
    | |||||||||    
T  29421295 caaacccggta 29421285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 40968963 - 40969025
Alignment:
Q  173 atgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccc 234  Q
    |||||||||||||| ||||||| ||||  ||||||  ||||||||||||||||||||||||||    
T  40968963 atgcgtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtattccc 40969025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 10702170 - 10702227
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgc 176  Q
    ||||||||||||| ||||||||||||||| ||  ||||| |||||||| |||||||||    
T  10702170 ttttgctttcgcaccagtttctgacccactaaaggtggatgactaatccgactcatgc 10702227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 26805413 - 26805328
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaa 199  Q
    |||| ||| ||||| ||||| ||||  || |||||||  |||| ||||||||| |||||||||||||||||||  |||||||||||    
T  26805413 ttttttttggcttttgcatcggttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaa 26805328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 30721888 - 30721941
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||||||| ||||||| ||||||| ||| ||||||| ||||||||||||||||    
T  30721888 cgactaatccgactcatacgtagagacatgcgcactgaccaagtgttgttcccc 30721941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 37560251 - 37560170
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattcc 233  Q
    |||||||| ||||| | ||| ||||||||||||| ||||||| ||||  ||||||||||| || ||||||||| ||||||||    
T  37560251 gtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattcc 37560170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 44945701 - 44945592
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaa 222  Q
    ||||||||| | ||||| || |||| ||  |||| ||||||||| | ||| ||||||||||||| ||||||  ||||| |||||||| |||| |||| ||    
T  44945701 gctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttcctctgggaatcaaa 44945602  T
Q  223 cccggtattc 232  Q
    ||| ||||||    
T  44945601 cccagtattc 44945592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 13104856 - 13104908
Alignment:
Q  156 gacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc 208  Q
    |||||||||| |  ||||||||||||||||| ||||||||||||| |||||||    
T  13104856 gacgactaatttagctcatgcgtagaggcatgcgcactggccaagcgttgttc 13104908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 16035049 - 16034929
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaa 217  Q
    |||| |||||||| | ||||| ||| || |||| |||  ||||||||| | ||| | |||| |||||| | |||||| |||| |||||||| |||| |||    
T  16035049 tttttctttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaa 16034950  T
Q  218 tcgaacccggtattccccgga 238  Q
    |||||||||||||||| ||||    
T  16034949 tcgaacccggtattcctcgga 16034929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 39201518 - 39201582
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaa 199  Q
    ||||| ||||||||||  ||| |||||||||| | ||||||||||||||||| | ||||||||||    
T  39201518 gtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaa 39201582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 41187787 - 41187707
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 232  Q
    |||| |||||||| || |||||||||||||||||   |||||| ||||||||||| |||||   |||||||||||||||||    
T  41187787 gtgggcgactaatatgtctcatgcgtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattc 41187707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 9360742 - 9360861
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaa 217  Q
    |||| |||||||| | ||||| | ||||| ||  |||| ||||||||  | ||| ||||||||||||| ||||||||||||  |||| |||| || | ||    
T  9360742 tttttctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaa 9360841  T
Q  218 tcgaacccggtattccccgg 237  Q
    ||||||| ||||||||||||    
T  9360842 tcgaacctggtattccccgg 9360861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 34738327 - 34738394
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcat 186  Q
    ||||||||| ||| | ||||| |||| |||| | |||||||||||||| ||||| |||||||||||||    
T  34738327 ttttgcttttgcaccggtttccgacctaccattggtggacgactaatccgactcgtgcgtagaggcat 34738394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 27726036 - 27725962
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc 209  Q
    ||||| ||||||||| | |||| ||||||||| | ||  ||||||||||||| |||||||||||||  |||||||    
T  27726036 gtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttcc 27725962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 29653684 - 29653626
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtatt 231  Q
    ||||||||||||| ||||||| ||||| |||| || |||||||||||||| ||||||||    
T  29653684 tgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtatt 29653626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 34130323 - 34130401
Alignment:
Q  146 accaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacc 224  Q
    |||||| || ||||||||||||| ||||||||||||| |||  ||| ||| |||  ||||||| |||| ||||||||||    
T  34130323 accaatggtagacgactaatctggctcatgcgtagagacatgtgcaatggtcaaacgttgttctcctgaaaatcgaacc 34130401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 35443859 - 35443925
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggca 185  Q
    |||||||||  |||| ||||| || ||| ||||| ||||||||||||| | ||||||||||||||||    
T  35443859 ttttgcttttacatcggtttccgatccatcaataatggacgactaatccggctcatgcgtagaggca 35443925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 41187922 - 41187873
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    ||||||||| | ||||||||||||||||| |||||||| |||| ||||||    
T  41187922 cgactaatccgtctcatgcgtagaggcatgcgcactggtcaagcgttgtt 41187873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 1773660 - 1773700
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtaga 181  Q
    ||||||||||| ||||||||||||||  |||||||||||||    
T  1773660 gacccaccaatggtggacgactaatccaactcatgcgtaga 1773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 2528374 - 2528450
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcc 233  Q
    ||||||||| | || ||| |||||||||| | ||||| ||||| |||||||||| ||| ||||||||||||| ||||    
T  2528374 cgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaacccggtgttcc 2528450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 31088430 - 31088342
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaac 223  Q
    ||||| |||||| |||| ||||  | |||||||||||||||||||||||||| |  ||||  |||| ||||||  ||||| ||||||||    
T  31088430 gtttccgacccatcaatggtgggtggctaatctgactcatgcgtagaggcatgcatactgttcaagcgttgttttcctgggaatcgaac 31088342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 31740750 - 31740842
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgt 206  Q
    |||| |||| || ||||| ||||||  || |||||||  ||||||||||| |||||||| ||| |||| |||| ||||||| ||||| |||||    
T  31740750 tttttttttactctcgcaccagttttcgatccaccaaaggtggacgactagtctgactcgtgcctagaagcattcgcactgaccaagcgttgt 31740842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 6e-32; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 3418502 - 3418624
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||||||||||||| | ||||||||||||| ||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||    
T  3418502 tttttttttgctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcct 3418601  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
      |||||||||||| ||||||||    
T  3418602 aaaaatcgaacccgatattcccc 3418624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 8141214 - 8141100
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||||| ||||||||||||||||  |||||||||||||    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  8141214 gctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcga 8141115  T
Q  222 acccggtattccccg 236  Q
    |||||||||||||||    
T  8141114 acccggtattccccg 8141100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 9859989 - 9860106
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    ||||||||| ||||| ||||| || |||||||| |||||||||||||||| |||||| |||||||||| | |||||||||||||||||| ||||||| ||    
T  9859989 ttttgcttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaa 9860088  T
Q  218 tcgaacccggtattcccc 235  Q
    ||||||||||||||||||    
T  9860089 tcgaacccggtattcccc 9860106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 2467107 - 2467232
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| ||| ||||||| |||||||||||||| | ||||||| ||||| ||| ||||||||||||| |||||| |||||    
T  2467107 ttttttttggctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccct 2467206  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    ||||||||||||||||||||||||||    
T  2467207 ggaaatcgaacccggtattccccgga 2467232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 45521289 - 45521166
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||||||| | ||||| |||||| |||  |||  ||||||||| | ||||||||||||||||| |||||||  |||||||||||||||||    
T  45521289 tttttttttgctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcccctg 45521190  T
Q  214 gaaatcgaacccggtattccccgg 237  Q
    | ||||||||||||||||||||||    
T  45521189 ggaatcgaacccggtattccccgg 45521166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 15884556 - 15884666
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacc 224  Q
    ||||||| | ||||| ||||||||||  |||| ||||||||| | ||| ||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttcccctgggaatcgaacc 15884655  T
Q  225 cggtattcccc 235  Q
    |||||||||||    
T  15884656 cggtattcccc 15884666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 10927727 - 10927603
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||||| ||||| ||||||| ||  ||| |||||||||| | ||||||||||||||||| ||||||||||||| |||||||| |||    
T  10927727 ttttttttggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcct 10927628  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
     | ||||||||||||||||||||||    
T  10927627 aggaatcgaacccggtattccccgg 10927603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 14666069 - 14666185
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcga 221  Q
    ||||||||| | ||||  ||||||||||  |||| ||||||||||| ||  ||||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  14666069 gctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcga 14666168  T
Q  222 acccggtattccccgga 238  Q
    |||||||||||||||||    
T  14666169 acccggtattccccgga 14666185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 4479296 - 4479403
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacc 224  Q
    ||||||| | ||||| ||||||||||  ||||||||||||||   ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |    
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcccctgggaatcgaatc 4479395  T
Q  225 cggtattc 232  Q
    ||||||||    
T  4479396 cggtattc 4479403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 14846687 - 14846573
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaa 222  Q
    ||||||||| |  |||| ||||||||||  |||||||||| ||||||||||||||||||||||| ||||||| ||||   |||||||||||  |||||||    
T  14846687 gctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttcccctgagaatcgaa 14846588  T
Q  223 cccggtattccccgg 237  Q
    |||||||||||||||    
T  14846587 cccggtattccccgg 14846573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 6100593 - 6100468
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||  ||||||| ||  ||| |||||||||| | ||||||||||| ||||| ||||||||||||| |||||||| |||    
T  6100593 ttttttttggctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcct 6100494  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || |||||||||||||||||||||||    
T  6100493 gggaatcgaacccggtattccccgga 6100468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 33401799 - 33401911
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaa 222  Q
    |||||||||| |||| ||| |||| ||  |||| ||||||||| ||||||||||||||||||| | |||||| ||||||||||| |||||| ||||||||    
T  33401799 ctttcgcatcggttt-tgatccactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaa 33401897  T
Q  223 cccggtattccccg 236  Q
    ||||||||||||||    
T  33401898 cccggtattccccg 33401911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 6042917 - 6042818
Alignment:
Q  139 ctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 237  Q
    ||||||||||| | |||| ||||||||| | |||||||||  |||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  6042917 ctgacccaccagtggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattccccgg 6042818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 43027426 - 43027304
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||||||||||||||| ||||| |||||| |||   ||||||||||||| | ||||||||||||||||| |||| ||| |||  |||||||| |||    
T  43027426 tttttttttgctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcct 43027327  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    || |||||||||| |||||||||    
T  43027326 gggaatcgaacccagtattcccc 43027304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 43033022 - 43032904
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||||||||||||||  |||| ||||||||| | ||| || |||||||||| ||||||||||||| |||||| |||||    
T  43033022 tttttttttgctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccct 43032923  T
Q  213 ggaaatcgaacccggtatt 231  Q
    || ||||||| ||| ||||    
T  43032922 gggaatcgaatccgatatt 43032904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 583933 - 583817
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||||||| ||||||||| | |||||| | ||| |||  |||| ||||||||| ||||||||||||||||||| |||||||| |||| |||||| ||||     
T  583933 ttttgtttggctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt-cccta 583835  T
Q  214 gaaatcgaacccggtatt 231  Q
    | ||||||||||||||||    
T  583834 ggaatcgaacccggtatt 583817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 36662515 - 36662406
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaac 223  Q
    |||||||||| ||||| || |||  || ||||||||||||||| |  |||| ||||||||||| ||||||||| |||| ||||||||||| |||||||||    
T  36662515 ctttcgcatcggtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactggctaagtattgttcccctgaaaatcgaac 36662416  T
Q  224 ccggtattcc 233  Q
    ||| ||||||    
T  36662415 ccgatattcc 36662406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 24837363 - 24837239
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccct 212  Q
    |||| ||| ||||||||| ||||||| || |||||||  ||||||||||||||   ||| ||| |||||||||   ||||||||||| ||||||| ||||    
T  24837363 ttttttttggctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccct 24837264  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || |||||||| |||||||||||||    
T  24837263 gggaatcgaacacggtattccccgg 24837239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 33935768 - 33935844
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcc 233  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||||||||| |||| | ||||||| ||||||||||    
T  33935768 cgactaatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattcc 33935844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 8997533 - 8997656
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||||||||||||| | ||||| ||||||||||   || |||||||||||| |||||||||| |||||| || |||||| ||  |||||||||| |    
T  8997533 tttttttttgctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttcccctt 8997632  T
Q  213 ggaaatcgaacccggtattccccg 236  Q
     | |||||||| ||||||||||||    
T  8997633 aggaatcgaacacggtattccccg 8997656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 18374104 - 18374006
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||   ||||||||||||| | ||||||||||||||||| |||||||| |||| ||||||| |||||  ||||||||| |||||| ||||||    
T  18374104 gacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccgga 18374006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 1013022 - 1013091
Alignment:
Q  170 ctcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 238  Q
    |||||||||||||||||  | |||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  1013022 ctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccgga 1013091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 26571045 - 26570948
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||| |||||| |||| ||||| ||| || |||  |||||||||||||| | |||||||||||| |||||| ||||||||||| ||||||||||    
T  26571045 ttttttttggctttcacatcggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttcccc 26570948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 2964197 - 2964073
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||||||||||||||  |||| ||||||||| |  || ||||||||||||| | || |||||||| |||||||| | |    
T  2964197 ttttttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcat 2964098  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
     | |||||||| |||||||||||||    
T  2964097 cggaatcgaacacggtattccccgg 2964073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 38922463 - 38922527
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgg 237  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  38922463 tgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgg 38922527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 17981557 - 17981438
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    ||||||||||||| | ||||| ||| ||||||   ||| | ||||||  ||||| ||||||||||||| | |||||| |||| |||||| ||||||| ||    
T  17981557 ttttgctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaa 17981458  T
Q  218 tcgaacccggtattccccgg 237  Q
    |||||||||||||| |||||    
T  17981457 tcgaacccggtatttcccgg 17981438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 39969904 - 39969983
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcact 193  Q
    |||| ||||||||||||||| ||||| || ||| ||||  ||| |||||||||||||||||| |||||||||| ||||||    
T  39969904 tttttttttgctttcgcatcggtttccgatccatcaatgatgggcgactaatctgactcatgtgtagaggcatgcgcact 39969983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 3568004 - 3567928
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||| ||||||||||  ||||| ||||||| || |||||||||||||| ||  ||||||| |||||||||||||||    
T  3568004 gtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaagtgttgttcccc 3567928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 11298256 - 11298352
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    |||| ||| ||||||||| | ||||| ||||||||||  |||  ||| |||| || ||||||| ||||||||| ||||||||| |||||||||||||    
T  11298256 ttttttttggctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactggctaagtgttgttccc 11298352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 11785988 - 11785913
Alignment:
Q  162 taatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 237  Q
    ||||||| ||||||||||||||||| | ||||| ||||  |||| |||||| | ||||||| ||||||||||||||    
T  11785988 taatctggctcatgcgtagaggcatgcacactgcccaaacgttgctccccttggaatcgaatccggtattccccgg 11785913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 16291192 - 16291303
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    ||||||||||||||| || | ||||  ||||||||||  |||  |||||||||   ||||||| |||||||||  | ||||||||||||||||| |||||    
T  16291192 ttttgttttgctttcacaccggttttcgacccaccaaaggtgagcgactaatccagctcatgcatagaggcatgtgtactggccaagtgttgttccccct 16291291  T
Q  213 ggaaatcgaacc 224  Q
    | ||||||||||    
T  16291292 gaaaatcgaacc 16291303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 27976015 - 27975900
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc- 209  Q
    ||||||| ||| ||||||||||| ||| ||||||||| ||  |||| ||| ||||| | |||| |||||||||||| | |||||  |||||||||||||     
T  27976015 ttattttttttggctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttcct 27975916  T
Q  210 cctggaaatcgaaccc 225  Q
     |||| ||||||||||    
T  27975915 tctgggaatcgaaccc 27975900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 28033284 - 28033169
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc- 209  Q
    ||||||| ||| ||||||||||| ||| ||||||||| ||  |||| ||| ||||| | |||| |||||||||||| | |||||  |||||||||||||     
T  28033284 ttattttttttggctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttcct 28033185  T
Q  210 cctggaaatcgaaccc 225  Q
     |||| ||||||||||    
T  28033184 tctgggaatcgaaccc 28033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 34710583 - 34710674
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtatt 231  Q
    |||||||||||  |||||||||| || ||||  || ||| |||||| |||||| ||||||||||| ||||||||| ||||||| ||||||||    
T  34710583 gacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaatccggtatt 34710674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 43497658 - 43497705
Alignment:
Q  189 gcactggccaagtgttgttcccctggaaatcgaacccggtattccccg 236  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||    
T  43497658 gcactgaccaagtgttgttcccctgaaaatcgaagccggtattccccg 43497705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 3379823 - 3379881
Alignment:
Q  136 tttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactg 194  Q
    |||| |||||||||| ||||||||||||||| ||||||||| ||||||| | |||||||    
T  3379823 tttccgacccaccaaaagtggacgactaatccgactcatgcatagaggcgtgcgcactg 3379881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 2209899 - 2209811
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    |||| |||||||| |||||||||||| |||||| |||  |||||||||  ||| |||||||| | ||| ||||||| |||| |||||||    
T  2209899 tttttctttcgcaccagtttctgacctaccaatggtgagcgactaatccaacttatgcgtagggacatgcgcactgaccaaatgttgtt 2209811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 44893327 - 44893391
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||||||| | |||||||||||  ||||| ||||| ||||| ||||||||||||||||||    
T  44893327 tgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgg 44893391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 22810156 - 22810088
Alignment:
Q  156 gacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccg 226  Q
    ||||||||||||| |||||||| |||  ||| ||||||| ||||| |||||||||| || |||||||||||    
T  22810156 gacgactaatctggctcatgcgaaga--catgcgcactgaccaagcgttgttccccagggaatcgaacccg 22810088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 23895689 - 23895595
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc 208  Q
    |||| |||| |||||||| | ||||| |||||| |||  |||||||| |||||   ||| |||||||||| || ||||||||||||| |||||||    
T  23895689 ttttttttttctttcgcacccgtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgttc 23895595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 30903408 - 30903334
Alignment:
Q  162 taatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccg 236  Q
    ||||||||||  || |||| ||||| |||||||| ||||  ||||| ||||| |||||||| |||||||||||||    
T  30903408 taatctgacttgtgtgtagcggcatgcgcactggtcaagcattgtttccctgaaaatcgaatccggtattccccg 30903334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 8586984 - 8587025
Alignment:
Q  170 ctcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||||||||||||| || ||||||||||||| ||||||||||    
T  8586984 ctcatgcgtagaggtatgcgcactggccaagcgttgttcccc 8587025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 13085597 - 13085520
Alignment:
Q  162 taatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgga 238  Q
    ||||||| ||| |||||||||| || | ||||||| ||  ||||||||| |||  |||||||||||||||||||||||    
T  13085597 taatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccgga 13085520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 24938590 - 24938675
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgg 237  Q
    ||||| |||||||| |  |||||||||||||||| |||| || |||||||||| |||  || ||||||||||| ||||||| ||||    
T  24938590 gtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtttcatctagaaatcgaacctggtattctccgg 24938675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 29933849 - 29933780
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccg 226  Q
    ||||||||| | ||||| |||||||||||   |||||| |||||||||||| |||||| |||||||||||    
T  29933849 cgactaatccggctcatacgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaacccg 29933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 34846874 - 34846813
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccc 234  Q
    ||||||||||||| |  |||||||||| ||||||| || ||| |||||||||||||||||||    
T  34846874 tgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattccc 34846813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 6940668 - 6940561
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaa 222  Q
    ||||| |||| |||||  |||||||||  ||||| |||||||  |||||||| ||| ||  || |||||| |||||| |||||||| |||||||||||||    
T  6940668 ctttcacatcggtttcctacccaccaaaggtggatgactaattcgactcatgtgtaaagt-atgcgcactagccaagcgttgttccacctggaaatcgaa 6940570  T
Q  223 cccggtatt 231  Q
    |||| ||||    
T  6940569 cccgatatt 6940561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 16894059 - 16893933
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    ||||||| ||| ||||||||| | ||||| |||| |||||  |||| |||| |||| | |||||||||| ||||||  | |||||||||| ||| |||||    
T  16894059 ttattttttttggctttcgcaccggtttccgacc-accaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccc 16893962  T
Q  211 c-tggaaatcgaacccggtattccccgga 238  Q
    | ||  ||||||||||| |||||||||||    
T  16893961 cctgtgaatcgaacccgatattccccgga 16893933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 44031505 - 44031553
Alignment:
Q  190 cactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 237  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| |||||    
T  44031505 cactggccaagcgttgttccccctggaaatcgaacccgatatttcccgg 44031553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 6e-32; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 1538540 - 1538426
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||| | ||||| ||||||||||| |||||||| ||||| | ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  1538540 gctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcga 1538441  T
Q  222 acccggtattccccg 236  Q
    |||||||||||||||    
T  1538440 acccggtattccccg 1538426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 19572845 - 19572717
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cc 209  Q
    ||||||| ||| |||||||||   |||||  |||||||||| ||| |||||||||| | ||||||||||||||||| |||||||||||||||||||| ||    
T  19572845 ttattttttttggctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccc 19572746  T
Q  210 cctggaaatcgaacccggtattccccgga 238  Q
    ||||| |||| ||||||||||||||||||    
T  19572745 cctgggaatctaacccggtattccccgga 19572717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 9805113 - 9805003
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||| | ||||| ||||||||||  |||||||||||||| | ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  9805113 gctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcga 9805014  T
Q  222 acccggtattc 232  Q
    |||||||||||    
T  9805013 acccggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 20525945 - 20525831
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaac 223  Q
    ||||||| | ||||| || |||||||| |||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||||    
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaac 20525846  T
Q  224 ccggtattccccgga 238  Q
    ||| |||||||||||    
T  20525845 ccgatattccccgga 20525831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 42861207 - 42861332
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccct- 212  Q
    |||| ||| ||||||||| | || || ||||||||||| |||||||| ||||| | ||||||||||||||||| |||||||||||||||||||| ||||     
T  42861207 ttttttttggctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctg 42861306  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    |||||| ||||||| |||||||||||    
T  42861307 ggaaattgaacccgatattccccgga 42861332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 5731909 - 5732033
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||| ||||||| ||  ||| |||||||||||| ||||| ||||||||||| ||||||||||||| |||||||| |||    
T  5731909 ttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcct 5732008  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  5732009 gggaatcgaacccggtattccccgg 5732033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 23383775 - 23383655
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| ||||||| ||||||||||  ||||||||||||||   ||||||||||||||||  ||||||||||||| |||||| |||||    
T  23383775 ttttttttagctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccct 23383676  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    || ||||||||||||||||||    
T  23383675 gggaatcgaacccggtattcc 23383655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 8513632 - 8513513
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaa 217  Q
    ||||||||||||| | ||||| ||||||||||  |||||||||||||||| ||| |||||||||||||  ||||||||||||  ||| ||||||| | ||    
T  8513632 ttttgctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaa 8513533  T
Q  218 tcgaacccggtattccccgg 237  Q
    ||||||||||||||||||||    
T  8513532 tcgaacccggtattccccgg 8513513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 41163449 - 41163572
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| ||||||||| ||||||| ||||||| ||  ||||||||||||||   ||||||||||||| |||  |||||||||||  ||||||||||||    
T  41163449 ttttttttggctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttcccctg 41163548  T
Q  214 gaaatcgaacccggtattccccgg 237  Q
    | ||||||||||||||||||||||    
T  41163549 ggaatcgaacccggtattccccgg 41163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 42086436 - 42086325
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||| | ||||| ||||||||||  |||||||||||||| | ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||    
T  42086436 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcga 42086337  T
Q  222 acccggtattcc 233  Q
    ||||||||||||    
T  42086336 acccggtattcc 42086325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 38369820 - 38369695
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    ||||||| ||||||||||||| |  ||||| ||||| |||  ||||   ||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  38369820 ttatttttttttgctttcgcaccgatttctaacccatcaaaggtgggttactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttccc 38369721  T
Q  211 ctggaaatcgaacccggtattccccg 236  Q
    |||  ||||||||||| |||||||||    
T  38369720 ctgagaatcgaacccgatattccccg 38369695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 38897708 - 38897829
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||| |||||||||   ||||| || |||||||  |||| | ||||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||    
T  38897708 ttttttttggctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctg 38897807  T
Q  214 gaaatcgaacccggtattcccc 235  Q
    ||||||||||||||||||||||    
T  38897808 gaaatcgaacccggtattcccc 38897829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 7617033 - 7616940
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccct 212  Q
    ||||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |  ||||| |||  |||||||||||    
T  7617033 ttttgctttcgcaccagtttccgatccaccaataatggacgactaatctgactcatgcgtagaggcatgcatactggtcaaacgttgttcccct 7616940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 20255478 - 20255393
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc 208  Q
    ||||||||| ||||||| ||| ||||||  |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  20255478 gctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttc 20255393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 24653801 - 24653925
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccct 212  Q
    |||| ||||||||||||||| ||||  ||||||||||| |||||||| ||||| | || ||||||||||| || ||||||| ||||||||||||| ||||    
T  24653801 tttttttttgctttcgcatcggttttcgacccaccaatggtggacgattaatccggct-atgcgtagaggtatgcgcactgaccaagtgttgttctccct 24653899  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    | |||||||||||  |||||||||||    
T  24653900 gaaaatcgaaccctatattccccgga 24653925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 25417182 - 25417295
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaa 222  Q
    |||||||| | ||||||||||||||||| ||  | |||||||| | ||| | ||||||||||| ||||||||||||| |||||| ||||||| |||||||    
T  25417182 ctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 25417281  T
Q  223 cccggtattccccg 236  Q
    ||||||||||||||    
T  25417282 cccggtattccccg 25417295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 28857190 - 28857122
Alignment:
Q  170 ctcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  28857190 ctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgg 28857122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 9812981 - 9812866
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcga 221  Q
    ||||||||| | ||||||||||||||||  |||| ||||||||| |  ||||||||||| |||| | ||||||||||| |||||||| ||| | ||||||    
T  9812981 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcga 9812882  T
Q  222 acccggtattccccgg 237  Q
    ||||||||||||||||    
T  9812881 acccggtattccccgg 9812866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 12766240 - 12766125
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcga 221  Q
    ||||||||| | ||||||||||||||||  |||| |||||||||||  |||||||||||||||| | |||||||||||  ||||||| |||   ||||||    
T  12766240 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcga 12766141  T
Q  222 acccggtattccccgg 237  Q
    ||||||||||||||||    
T  12766140 acccggtattccccgg 12766125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 13664379 - 13664257
Alignment:
Q  113 attttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccc 211  Q
    ||||| ||| ||||||||| | ||||| ||| ||||||  |||  ||| ||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  13664379 attttttttggctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccc 13664280  T
Q  212 tggaaatcgaacccggtattccc 234  Q
    ||  ||||||| |||||||||||    
T  13664279 tgataatcgaatccggtattccc 13664257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 2485314 - 2485194
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| |||| |||||||||| ||||| |||||| |||  |||  ||||||||| ||||||| ||||||||||| ||||| |||| || |||||||||||     
T  2485314 tttttttttactttcgcatcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcccagggttgttccccta 2485215  T
Q  214 gaaatcgaacccggtattccc 234  Q
    | |||||||||| ||||||||    
T  2485214 ggaatcgaacccagtattccc 2485194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 37263319 - 37263235
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 237  Q
    |||||||||||||| | ||| ||||||||||||| |||| |||||||| ||||||||||||  ||||||||||| ||||||||||    
T  37263319 gtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcccctgagaatcgaacccgatattccccgg 37263235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 12705123 - 12705008
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcga 221  Q
    ||||||||| | ||||||||||||||||  |||| ||||||||| |  ||||||||||| |||| | |||||| |||| |||||||| ||| | ||||||    
T  12705123 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcga 12705024  T
Q  222 acccggtattccccgg 237  Q
    ||||||||||||||||    
T  12705023 acccggtattccccgg 12705008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 9168281 - 9168366
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 238  Q
    |||||||||||||| | |||||||||||||| || ||||||||||||| |||||||| |||| |||||  | ||||||||||||||    
T  9168281 gtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcctctgggaatcgttctcggtattccccgga 9168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 15034154 - 15034069
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgg 237  Q
    |||||| ||||||| | ||||||||||||||||| | ||||| |||||||||| ||||| ||||||| ||||||||||||||||||    
T  15034154 gtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtattccccgg 15034069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 20682605 - 20682730
Alignment:
Q  113 attttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccc 211  Q
    ||||| ||||||||||||| | |||||  |||||| ||  |||| ||| ||||| | ||| ||||||||||||| ||||||||||||| |||||| ||||    
T  20682605 atttttttttgctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccc 20682704  T
Q  212 tggaaatcgaacccggtattccccgg 237  Q
    |||||||| |||||  ||||||||||    
T  20682705 tggaaatctaacccaatattccccgg 20682730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 39099768 - 39099865
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||| ||||| ||| | ||||| ||||||||||  |||| ||||||||| | |||||||||||||||||  |||||||||||||||||||||||    
T  39099768 ttttttttggcttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttcccc 39099865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 7866699 - 7866579
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| |||||||||||||   |||||| |||||||||  |||| ||||||||| |  || ||||||||||||| | ||||||||||| |||||||| |||    
T  7866699 tttttttttgctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcct 7866600  T
Q  213 ggaaatcgaacccggtattcc 233  Q
     | ||||||||||||||||||    
T  7866599 cggaatcgaacccggtattcc 7866579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 18136265 - 18136394
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaat----ctgactcatgcgtagaggcatacgcactggccaagtgttgtt-c 208  Q
    |||| ||| ||||| ||| | ||||| ||||||||||| |||||||||||||    | | |||||| |||||||||| | ||||| |||||||||||| |    
T  18136265 ttttttttggcttttgcaccggtttccgacccaccaatggtggacgactaattaatccggctcatgtgtagaggcatgcacactgaccaagtgttgttcc 18136364  T
Q  209 ccctggaaatcgaacccggtattccccgga 238  Q
    |||||| ||||||||||||||||| |||||    
T  18136365 ccctgggaatcgaacccggtattctccgga 18136394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 40117526 - 40117410
Alignment:
Q  121 ttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatc 219  Q
    ||||||||||| | ||||  || |||||||  ||| |||| ||||| | ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  40117526 ttgctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatc 40117427  T
Q  220 gaacccggtattccccg 236  Q
    |||  || |||||||||    
T  40117426 gaattcgatattccccg 40117410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 14588645 - 14588728
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcccc 235  Q
    |||||||||||||| | ||||||||||||||||| |||||||| |||| ||| |||| |||| |||||||||||| ||||||||    
T  14588645 gtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattcccc 14588728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 14974343 - 14974438
Alignment:
Q  144 ccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattccccgga 238  Q
    |||||||  |||||||||||||| | |||||||||||||||||  ||||||||||| ||||||||||||  | ||||||||||| ||||| |||||    
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccgga 14974438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 20228835 - 20228749
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaag 200  Q
    |||| |||||||||| |||| |||||||| |||||||   ||| ||||||||||||||| || ||||||||||||||||| ||||||    
T  20228835 tttttttttgctttcacatcggtttctgatccaccaaagatgggcgactaatctgactcgtgtgtagaggcatacgcactagccaag 20228749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 30995195 - 30995117
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 235  Q
    ||||||||| | ||| ||||||||||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||||||    
T  30995195 cgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattcccc 30995117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 12082026 - 12081901
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| |||||||||| || |  |||| ||| ||||||  |||||||||||||  | ||| |||||||| |||| ||||||||||||| |||||| |||||    
T  12082026 tttttttttgctttcacaccgatttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccct 12081927  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    |  |||||||||| ||||||||||||    
T  12081926 gagaatcgaacccagtattccccgga 12081901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 16755168 - 16755054
Alignment:
Q  113 attttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccc 211  Q
    ||||| |||| |||||||| | |||||| ||||||||||||||||||||||||| ||||||||            |||||||||||||||||| ||| ||    
T  16755168 attttttttttctttcgcaccggtttctaacccaccaatagtggacgactaatccgactcatg------------cgcactggccaagtgttgtttctcc 16755081  T
Q  212 tggaaatcgaacccggtattccccgga 238  Q
    || ||||||||||| ||||||||||||    
T  16755080 tgaaaatcgaacccagtattccccgga 16755054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 21375429 - 21375352
Alignment:
Q  154 tggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 231  Q
    ||||||||||||| |||||||||||||| |||| |||||||| ||| |||||||||| ||| | ||||||||| ||||    
T  21375429 tggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaatgttgttcccttgggagtcgaacccgatatt 21375352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 35561851 - 35561932
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||| |||||| |||||||||| |||||||| || ||||||||||| |||||| |||||| || |||||||||||    
T  35561851 cgactaatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccgga 35561932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 42291533 - 42291618
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccgg 237  Q
    |||||||||||||| | ||| |||||||||||||  |||||||||||| ||||||| |||||| |||| |||||||||||| ||||    
T  42291533 gtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtattctccgg 42291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 43399246 - 43399149
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||||||||||||| | ||||| |||| |||||  ||||||||||||||   ||| ||||||||||||| ||||||||||||| ||| ||||||    
T  43399246 tttttttttgctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattcccc 43399149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 20693051 - 20692927
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ct 212  Q
    |||| |||| |||||||| | ||||| ||||||||||  |||||| |||||||||| ||||||  ||||||||  | |||||||||| |||||| || ||    
T  20693051 tttttttttactttcgcaccggtttccgacccaccaaaggtggacaactaatctgaatcatgcacagaggcatgtgtactggccaagcgttgtttcctct 20692952  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
     | |||| |||||||||||||||||    
T  20692951 aggaatcaaacccggtattccccgg 20692927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 4016244 - 4016362
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| |||||||||   ||||| ||||||||||| |||  | ||||||| | ||| || |||||||||| |||||||||||||||||||| |||||    
T  4016244 ttttttttggctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccct 4016343  T
Q  213 ggaaatcgaacccggtatt 231  Q
    |  ||||||||||| ||||    
T  4016344 gataatcgaacccgatatt 4016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 18294473 - 18294591
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||| ||||  ||||| ||||||||||   ||| ||| ||||| |  ||||| ||||||| || ||||||| ||||| ||||||||||||    
T  18294473 tttttttttgcttttgcattggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttcccctg 18294572  T
Q  214 gaaatcgaacccggtattc 232  Q
    || || |||||||||||||    
T  18294573 gatattgaacccggtattc 18294591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 3653933 - 3654025
Alignment:
Q  144 ccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 237  Q
    |||||||  |||||||||||||| | ||| ||||||||||||| |||||||| |||| |||||| | || | ||||||||||||||||| ||||    
T  3653933 ccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgtt-ctctaggaatcgaacccggtattctccgg 3654025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 20590117 - 20590020
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||| |||| |||| | ||||| || || |||||||||||| ||||||  | ||||||||||||| ||| ||||||||||||| ||||||||||    
T  20590117 ttttttttggcttccgcaccggtttccgatcctccaatagtggacaactaatacggctcatgcgtagagtcatgcgcactggccaagcgttgttcccc 20590020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 22295334 - 22295237
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| |||||||||||||||  ||||||||| |||||   |   |||||||||  |||||||||||||||||| |||||||||||||| || ||||||    
T  22295334 tttttttttgctttcgcatcgatttctgacctaccaaagataagcgactaatccaactcatgcgtagaggcatgcgcactggccaagtattattcccc 22295237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 30349697 - 30349572
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-t 212  Q
    |||| ||| ||||||||| | ||||| | |||||| |  |||||||||||||    ||||||| ||||||||| ||||||||||||   ||||||||| |    
T  30349697 ttttttttggctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccct 30349598  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
     |||||| ||||||||||||||||||    
T  30349597 agaaatcaaacccggtattccccgga 30349572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 7308397 - 7308473
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 233  Q
    ||||||||| | |||||||||||||||||  |||||| ||||| |||||| ||||||| ||||||||||| ||||||    
T  7308397 cgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcc 7308473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 14728201 - 14728082
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgt--tcccc 211  Q
    |||| ||||||||||||| | ||||| |||||| |||  |||  | ||||||| | ||||||||||||||||| ||||||| ||||| |||||   ||||    
T  14728201 tttttttttgctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgtccccccc 14728102  T
Q  212 tggaaatcgaacccggtatt 231  Q
    || |||||||| ||||||||    
T  14728101 tgaaaatcgaatccggtatt 14728082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 1899050 - 1898995
Alignment:
Q  183 gcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 237  Q
    |||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgg 1898995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 20156172 - 20156227
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc 208  Q
    |||||||| ||||||||||||||| |||| |||| |||||| ||||||||||||||    
T  20156172 gtggacgattaatctgactcatgcatagatgcatgcgcactagccaagtgttgttc 20156227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 23247379 - 23247462
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcccc 235  Q
    |||||||||||||||| ||| ||||||||||||| |  ||||  |||| |||||||| ||||| ||||||||||| ||||||||    
T  23247379 gtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaacccgatattcccc 23247462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 26077211 - 26077137
Alignment:
Q  162 taatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcccc 235  Q
    ||||||| ||| |||||||||||||  |||||||||||| ||||||||| |||| |||||||||  |||||||||    
T  26077211 taatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattcccc 26077137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 14152163 - 14152046
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaa 217  Q
    ||||||||||||||  ||||  || ||| |||| |||||||| ||||| | ||||||  |||| |||| | ||||||||||| |||||||||  ||  ||    
T  14152163 ttttgctttcgcataggttttcgatccatcaatggtggacgattaatccggctcatggatagaagcatgcacactggccaagcgttgttccctatgagaa 14152064  T
Q  218 tcgaacccggtattcccc 235  Q
    ||||||||||||||||||    
T  14152063 tcgaacccggtattcccc 14152046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 18262646 - 18262731
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 237  Q
    |||| ||||||||| | ||| || ||||||| || |||||||| |||| |||||||||| || |||| ||||||||||||||||||    
T  18262646 gtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaacccggtattccccgg 18262731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 35813026 - 35813107
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgtt-gttcccctggaaatcgaacccggtattcc 233  Q
    |||||||||||||| |||||||| |||||| ||| |||||||| ||||  ||  ||||||| | ||||||||||||||||||    
T  35813026 gtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcc 35813107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 40060340 - 40060295
Alignment:
Q  188 cgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 232  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  40060340 cgcactggccaagtgttgttccccctgaaaatcgaacccggtattc 40060295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 14235703 - 14235771
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagag 182  Q
    |||| ||||||||| ||||| ||||||||||||||||  ||||  |||||||| ||||||||| |||||    
T  14235703 tttttttttgcttttgcatcggtttctgacccaccaaaggtgggtgactaatccgactcatgcttagag 14235771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 18045751 - 18045632
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaa 217  Q
    |||| |||||||||| ||||| || |||| ||  |||||||| ||||| | |||||| |||||||||| || ||   ||||| |||||||||| ||| ||    
T  18045751 tttttctttcgcatcggtttccgatccactaaaggtggacgattaatcgg-ctcatgtgtagaggcatgcgtaccaaccaagggttgttccccctgggaa 18045653  T
Q  218 tcgaacccggtattccccgga 238  Q
    |||||||| ||||||||||||    
T  18045652 tcgaacccagtattccccgga 18045632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 39728461 - 39728381
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||  |||||  |||||||||||| | |||||||||||||||| |||| |||  ||||||||| ||||||||||||    
T  39728461 cgactaattcgactcgagcgtagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgg 39728381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 43212494 - 43212590
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    |||| |||| |||||| ||| ||||||||||||| ||| ||| ||||||||||  ||||||| | |||||||| || | |||||||  |||||||||    
T  43212494 tttttttttactttcgtatcggtttctgacccacaaatggtgaacgactaatccaactcatgtgcagaggcatgcgtattggccaaacgttgttccc 43212590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 35638060 - 35638131
Alignment:
Q  152 agtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaa 222  Q
    ||||||||||||||||||||| |||||||||| || | ||||| ||||  |||||||| |||| ||||||||    
T  35638060 agtggacgactaatctgactcgtgcgtagaggtatgcacactgaccaaacgttgttcctcctgaaaatcgaa 35638131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 41801052 - 41800973
Alignment:
Q  157 acgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattcccc 235  Q
    |||||||||| | ||| ||||||||| ||| |||| ||| |||| ||||||||||| || ||||||||||| ||||||||    
T  41801052 acgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaacccgatattcccc 41800973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 11845846 - 11845908
Alignment:
Q  170 ctcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtatt 231  Q
    ||||| ||||||||||| ||||||||||||  |||||| ||||| ||||||||||||| ||||    
T  11845846 ctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgatatt 11845908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 28857264 - 28857194
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggc 184  Q
    |||| ||||||||||||| | ||||| ||||||||||  |||  ||||||||| | |||||||||||||||    
T  28857264 tttttttttgctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggc 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 35006769 - 35006843
Alignment:
Q  159 gactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattc 232  Q
    |||||||||| ||| ||||||||||||| | ||||| ||||| ||||||||| || | ||| |||||||||||||    
T  35006769 gactaatctggctcgtgcgtagaggcatgcacactgaccaagcgttgttccctctcggaatggaacccggtattc 35006843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 22655185 - 22655218
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcat 186  Q
    ||||||||||||||||||| ||||||||||||||    
T  22655185 gtggacgactaatctgacttatgcgtagaggcat 22655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 17693338 - 17693402
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagt-ggacgactaatctgactcatgcgtagaggcat 186  Q
    ||||||||| | |||||  ||||||||| ||  |||||||||||||| |||||||||||||||||    
T  17693338 gctttcgcaccggtttccaacccaccaaaagacggacgactaatctggctcatgcgtagaggcat 17693402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 27648414 - 27648486
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcat 186  Q
    |||| |||| |||||||||| ||||| || |||||||   ||||||||||||| | ||||| |||||||||||    
T  27648414 ttttttttttctttcgcatcggtttccgatccaccaaagatggacgactaatccggctcatacgtagaggcat 27648486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 41663846 - 41663971
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| ||||||||||| ||||||||||||||   ||||||||||||||||| ||||||| |||||||||||| |||||    
T  41663846 ttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccct 41663945  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || |||||||||||||||||||||||    
T  41663946 gggaatcgaacccggtattccccgga 41663971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 49078232 - 49078107
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccct 212  Q
    |||| ||| ||||||||| | ||||| |||| |||||| ||| |||||||||| | ||||||||||||||||| |||||||||||||||||| |||||||    
T  49078232 ttttttttggctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccct 49078133  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || |||||||||||||||||||||||    
T  49078132 gggaatcgaacccggtattccccgga 49078107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 11397879 - 11398003
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||||||| |  |||| ||||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||||     
T  11397879 tttttttttgctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcccctc 11397978  T
Q  214 gaaatcgaacccggtattccccgga 238  Q
    | ||||||||||||||||| |||||    
T  11397979 ggaatcgaacccggtattctccgga 11398003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 10422901 - 10422783
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaa 217  Q
    ||||||||||||| | ||||| |||  |||||  |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  10422901 ttttgctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaa 10422802  T
Q  218 tcgaacccggtattccccg 236  Q
    |||||||||||||||||||    
T  10422801 tcgaacccggtattccccg 10422783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 26325921 - 26325805
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ctggaaatcga 221  Q
    ||||||||| | ||||| ||||||||||| |||||||||||||| | ||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||    
T  26325921 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcga 26325822  T
Q  222 acccggtattccccgga 238  Q
    ||||| |||||| ||||    
T  26325821 acccgatattcctcgga 26325805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 5855640 - 5855517
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||||| ||||| ||||||| ||  ||| |||||||||| | ||||||||||||||||| ||||||||||||| |||||||| |||    
T  5855640 ttttttttagctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcct 5855541  T
Q  213 ggaaatcgaacccggtattccccg 236  Q
    || |||||||||||||||||||||    
T  5855540 gggaatcgaacccggtattccccg 5855517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 30927717 - 30927835
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ct 212  Q
    |||| ||||||||| ||| | |||||||||||||||| ||||||||||||||| | ||||||||||||||||| | || |||||||| ||||||||| ||    
T  30927717 tttttttttgcttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctct 30927816  T
Q  213 ggaaatcgaacccggtatt 231  Q
    |||||||||||||| ||||    
T  30927817 ggaaatcgaacccgatatt 30927835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 17642003 - 17642112
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||| ||||||| ||||||||||  |||||||||||||| | ||| ||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  17642003 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcga 17642102  T
Q  222 acccggtatt 231  Q
    |||| |||||    
T  17642103 acccagtatt 17642112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 50503351 - 50503476
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||||| ||||| ||||||||| | |||| |||| |||| | ||| ||||||||||||| |||||||| ||||||||||| |||||    
T  50503351 tttttttttgctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccct 50503450  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || ||||||||||| |||||||||||    
T  50503451 gggaatcgaacccgatattccccgga 50503476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 8764100 - 8763985
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcga 221  Q
    ||||||||| | ||||| ||||||||||  |||||||||||||| | ||| ||||||||||||| |||||||||||||||||||| ||||||| || |||    
T  8764100 gctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacga 8764001  T
Q  222 acccggtattccccgg 237  Q
    ||||| ||||||||||    
T  8764000 acccgatattccccgg 8763985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 9659169 - 9659291
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||| ||||||||||||| | |||||  |||||||||  |||||||||||||| | |||||||||| |||||| |||||| | |||  ||||||||||||    
T  9659169 tttttttttgctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcccctg 9659268  T
Q  214 gaaatcgaacccggtattccccg 236  Q
    | |||||||||||||||||||||    
T  9659269 ggaatcgaacccggtattccccg 9659291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 2980921 - 2981046
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ct 212  Q
    |||| ||||||||||||| |  |||| ||||||| ||   ||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||| ||    
T  2980921 tttttttttgctttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgct 2981020  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
    || |||||||||| ||||||||||||    
T  2981021 gggaatcgaacccagtattccccgga 2981046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 18915985 - 18915861
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | |||||  |||||||||| |||  ||||||||| | ||| ||||||||||||| | |||||||||||||||||| |||||    
T  18915985 ttttttttggctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccct 18915886  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  18915885 gggaatcgaacccggtattccccgg 18915861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 32142836 - 32142956
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||||| ||||| |||||| |||  |||  ||||||||  | |||||||||| |||||| |||||||||||||||||||| |||||    
T  32142836 tttttttttgctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccct 32142935  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    | |||||||||||||||||||    
T  32142936 gaaaatcgaacccggtattcc 32142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 26660250 - 26660133
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaa 217  Q
    ||||||||||||| | ||||| ||||||||||  |||| ||||||||| | ||||||||||||||||| || ||||  ||| ||||||||||| ||||||    
T  26660250 ttttgctttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaa 26660152  T
Q  218 tcgaacccggtattccccg 236  Q
    |||||||||||||||||||    
T  26660151 tcgaacccggtattccccg 26660133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 47312932 - 47313010
Alignment:
Q  157 acgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 235  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| | |||| |||||||||||||||    
T  47312932 acgactaatctggctcatgcgtagaggcatacgcactggccaaacgttgttcccctaggaatcaaacccggtattcccc 47313010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 16263653 - 16263541
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaa 222  Q
    |||||||| | ||||| || ||| ||| |||||||||||| || | || |||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  16263653 ctttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaa 16263554  T
Q  223 cccggtattcccc 235  Q
    || ||||||||||    
T  16263553 cctggtattcccc 16263541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 15466083 - 15465961
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||| ||| ||||| ||||||||||  |||  |||| |||| ||||| |||||||||||||  |||||| ||||| |||||| |||||    
T  15466083 tttttttttgctttcgtatcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccct 15465984  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    |||||||||||| ||||||||||    
T  15465983 ggaaatcgaacctggtattcccc 15465961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 34719894 - 34719772
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc-ct 212  Q
    |||| ||| ||||||||| ||||||| ||||||||||  |||  ||||||||||||||| ||||||||||||| |||||||| |||| ||| |||||  |    
T  34719894 ttttttttggctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagt 34719795  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    || |||||||||| |||||||||    
T  34719794 gggaatcgaacccagtattcccc 34719772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 21849222 - 21849307
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccg 226  Q
    |||||||||||||||  ||||||||| | ||| ||||||||||||| |||||| |||||| ||||||||||||| |||||||||||    
T  21849222 gacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcccctgggaatcgaacccg 21849307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 34697455 - 34697330
Alignment:
Q  112 tattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-ccc 210  Q
    |||||| ||| ||||||||||| |||||  ||||| ||| ||||| ||||||||| | ||||||||||||||||| | |||| ||||||||||||| |||    
T  34697455 tattttttttggctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttcccc 34697356  T
Q  211 ctggaaatcgaacccggtattccccg 236  Q
    ||   ||||||||| |||||||||||    
T  34697355 ctaagaatcgaacctggtattccccg 34697330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 14254279 - 14254381
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 233  Q
    ||||| |||||| |||  |||||||||||||| | |||||||||| |||||| || |||||||||| |||||| |||||| ||||||||| |||||||||    
T  14254279 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattcc 14254378  T
Q  234 ccg 236  Q
    |||    
T  14254379 ccg 14254381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 37339938 - 37339813
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgt--tcccc 211  Q
    |||| ||| ||||||||| | |||||  |||||||||  |||| ||||||||| | ||| ||||| ||||||| ||||||||||||| |||||   ||||    
T  37339938 ttttttttggctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccc 37339839  T
Q  212 tggaaatcgaacccggtattccccgg 237  Q
    ||| ||||||||||||||||||||||    
T  37339838 tgggaatcgaacccggtattccccgg 37339813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 43959809 - 43959935
Alignment:
Q  113 attttgttttg-ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-ccc 210  Q
    ||||||||||| |||||||| | ||||| || |||| ||  |||| ||||||||| | ||| ||||||||||||| ||||||||||||| |||||| |||    
T  43959809 attttgttttggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccc 43959908  T
Q  211 ctggaaatcgaacccggtattccccgg 237  Q
    |||| ||| ||||||| ||||||||||    
T  43959909 ctgggaattgaacccgatattccccgg 43959935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 45361872 - 45361993
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||| ||||||||| | ||||| ||||||| ||  ||| |||||||||| | || |||||||| ||||| ||||||||||||| |||||||| |||    
T  45361872 ttttttttagctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcct 45361971  T
Q  213 ggaaatcgaacccggtattccc 234  Q
    |  |||||||||||||||||||    
T  45361972 gagaatcgaacccggtattccc 45361993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 41696597 - 41696701
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgtt-gttcccctggaaatcga 221  Q
    ||||||||||||||||| || ||| |||  |||  |||||||||||| || ||||||||||||||| |||||| ||||||||  | ||||||||||||||    
T  41696597 gctttcgcatcagtttccgatccatcaaaggtgagcgactaatctgattcgtgcgtagaggcatacacactggtcaagtgttaatccccctggaaatcga 41696696  T
Q  222 acccg 226  Q
    |||||    
T  41696697 acccg 41696701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 48798105 - 48798185
Alignment:
Q  159 gactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 238  Q
    |||||||| | ||||||||||||||||| |||||| | |||| |||||| ||||||||||||||||||| |||||||||||    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccgga 48798185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 110 - 232
Target Start/End: Complemental strand, 2567398 - 2567275
Alignment:
Q  110 attattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttc 208  Q
    |||| ||| |||| |||||| | | ||||| ||||||||||   |||||| |||||||||||| || |||||||||| ||||||||||||| |||| ||     
T  2567398 attaatttttttttctttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgtttt 2567299  T
Q  209 ccctggaaatcgaacccggtattc 232  Q
    ||| | ||||||||||||||||||    
T  2567298 ccccgaaaatcgaacccggtattc 2567275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 33004015 - 33004130
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaa 222  Q
    |||||||| | ||||  ||||||||| | ||||  |||||||| | ||| ||||||||||||| |||||||||||||  ||| |||||||||||||||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaa 33004114  T
Q  223 cccggtattccccgga 238  Q
     ||| |||||||||||    
T  33004115 tccgatattccccgga 33004130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 33498868 - 33498947
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtatt 231  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||| |||| ||| ||||  ||||||||||||||||    
T  33498868 gtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtatt 33498947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 45726428 - 45726543
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaa 217  Q
    |||| |||||||| |||| || || |||||||  ||| |||||||||| | ||||||||||||| |||||||||||||||| |||| |||| ||||  ||    
T  45726428 tttttctttcgcaccagtctccgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaa 45726527  T
Q  218 tcgaacccggtattcc 233  Q
    ||||||| ||||||||    
T  45726528 tcgaaccaggtattcc 45726543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 32989 - 32867
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cct 212  Q
    |||| ||||||||||| ||| ||||| || ||| ||| ||| ||||||||||  | |||||||||||||||||  |||||| ||||| |||||||| |||    
T  32989 tttttttttgctttcgtatcggtttccgatccatcaaaagtagacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcct 32890  T
Q  213 ggaaatcgaacccggtattcccc 235  Q
    || ||||| ||||| ||||||||    
T  32889 gggaatcggacccgatattcccc 32867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 4581672 - 4581758
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaag 200  Q
    |||| ||||||||||||| | ||||| ||||||||||  ||||||||||| || | ||| ||||||||||||| |||||||||||||    
T  4581672 tttttttttgctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 10172961 - 10173055
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc 208  Q
    |||| ||||||||||||| | ||||| ||||||||||  |||| ||| ||||| | |||||||||||||||||  |||||||||||| |||||||    
T  10172961 tttttttttgctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttc 10173055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 10336595 - 10336509
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 238  Q
    |||||||| ||||| | ||||||||||||||||| |||||||| |||| |||||| |||||| |||||||||||| ||||| |||||    
T  10336595 gtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccgga 10336509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 12744513 - 12744610
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||  ||||||||  | ||||||||||||| ||| |||||| | |||| ||||||||||    
T  12744513 ttttttttggctttcgcatctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttcccc 12744610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 12755503 - 12755600
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||| ||||||||||| |||||||||||||||| ||||  ||||||||  | ||||||||||||| ||| |||||| | |||| ||||||||||    
T  12755503 ttttttttggctttcgcatctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttcccc 12755600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 34334353 - 34334410
Alignment:
Q  182 ggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 238  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgga 34334410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 13262167 - 13262079
Alignment:
Q  148 caatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcccc 235  Q
    |||| |||||||||||||| ||||| ||||||||| ||| || | || ||||  ||||||| |||||||||||||||||||||||||||    
T  13262167 caatggtggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtattcccc 13262079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 17358459 - 17358583
Alignment:
Q  112 tattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-cc 210  Q
    |||||| ||||||||||| | | ||||||||||||| ||   || || ||||||| | |||||||||| |||||| |||| ||| |||| ||||||| ||    
T  17358459 tatttttttttgctttcgtagcggtttctgacccactaaagatgaacaactaatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctcc 17358558  T
Q  211 ctggaaatcgaacccggtattcccc 235  Q
    |||  ||||||||||||||||||||    
T  17358559 ctgagaatcgaacccggtattcccc 17358583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 18708574 - 18708650
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattcc 233  Q
    ||||||||||| |||||| |||||||||| |||||| ||||||  ||| |||||||||||||||||||| |||||||    
T  18708574 cgactaatctggctcatgtgtagaggcatgcgcactagccaagcattgcttcccctggaaatcgaacccagtattcc 18708650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 28324615 - 28324691
Alignment:
Q  159 gactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccc 234  Q
    |||||||| | ||||||||||||||||| ||||||| |||||||||| |||||| || ||||||||||| |||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattccc 28324691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 32150912 - 32151032
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||||| ||||  |||||| |||  |||  ||||||||  | |||||||||| |||||| ||||||| |||| ||||||| |||||    
T  32150912 tttttttttgctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccct 32151011  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    |||||||||||| | ||||||    
T  32151012 ggaaatcgaacctgatattcc 32151032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 44969761 - 44969665
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 231  Q
    ||||| || ||||||||  ||||||||||||| | ||||||||||| ||||| | ||||||||||| ||||||| ||||  ||||||||| ||||||    
T  44969761 gtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgttctcctgagaatcgaacctggtatt 44969665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 46929734 - 46929846
Alignment:
Q  120 tttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatc 219  Q
    |||||||||||||| ||||  || ||| ||| ||||||||||||||| | |||||| || ||||||| |||| |||||||| |||||||   ||||||||    
T  46929734 tttgctttcgcatcggttttcgatccatcaaaagtggacgactaatccggctcatgtgtggaggcatgcgcattggccaagcgttgttcttttggaaatc 46929833  T
Q  220 gaacccggtattc 232  Q
    |||| || |||||    
T  46929834 gaactcgatattc 46929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 35908837 - 35908754
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggcc-aagtgttgtt-cccctggaaatcgaacccggtattccc 234  Q
    |||||||||||||| | ||||||||||||||||| ||||||| || |||||||||| |||||  |||||||| |||||||||||    
T  35908837 gtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaaagtgttgttccccctaaaaatcgaatccggtattccc 35908754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 17092488 - 17092590
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattcc 233  Q
    |||||||| | |||||  |||||||||||||| | ||| ||||||||||||||| ||||||||||  |||| |||||||| ||||||||| || |||| |    
T  17092488 gtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactcgatatttc 17092587  T
Q  234 ccg 236  Q
    |||    
T  17092588 ccg 17092590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 31152795 - 31152713
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccc 234  Q
    ||||||||||||| |||||| || |||||||||  ||||||| ||||| ||| || |||| ||||||||||||||||||||||    
T  31152795 gtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccc 31152713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 34878059 - 34877985
Alignment:
Q  163 aatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccg 236  Q
    |||||| ||| || |||||||||| |||||||||||||||||||||| ||| | ||||||||| |||||||||||    
T  34878059 aatctggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccg 34877985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 42710160 - 42710246
Alignment:
Q  146 accaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtatt 231  Q
    |||||| |||||||||||||  |  | |||||||||||||| |||||||||||||| ||| |||||||| |||||||||||| ||||    
T  42710160 accaatggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcgaacccgatatt 42710246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 44716210 - 44716284
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcact 193  Q
    |||||||||||||| | |||  |||||||||| | ||||||||||||||||||||||| || |||||| ||||||    
T  44716210 ttttgctttcgcattaattttcgacccaccaaaaatggacgactaatctgactcatgcataaaggcatgcgcact 44716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 15238093 - 15238217
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcc 209  Q
    ||||||| ||||||||||| | | |||||  |||||||||  |||  |||||||| ||| || ||||||||||||| | || |||||||| |||| | ||    
T  15238093 ttatttttttttgctttcgaaccggtttccaacccaccaaaggtgagcgactaatatgattcgtgcgtagaggcatgctcattggccaagcgttgctccc 15238192  T
Q  210 cctggaaatcgaacccggtattccc 234  Q
    ||||| ||||||||||| |||||||    
T  15238193 cctgggaatcgaacccgatattccc 15238217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 17988690 - 17988770
Alignment:
Q  154 tggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 234  Q
    ||||||||||||| |  ||||||||||||| || |||||||||||||  ||||| ||||| ||||| |||| |||||||||    
T  17988690 tggacgactaatccggttcatgcgtagaggtatgcgcactggccaagcattgtttccctgaaaatcaaacctggtattccc 17988770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 45536766 - 45536702
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 237  Q
    |||||||||||||  |||||||||||| |||||||||| | ||||||||||||||||||| ||||    
T  45536766 tgcgtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattctccgg 45536702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 50095001 - 50094925
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||| ||||||| ||| |||||||||||||| |||||||||||||| |||| || ||||| |||  ||||||||||    
T  50095001 gtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgttgttcccc 50094925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 10507816 - 10507721
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc 209  Q
    |||||| | ||||||| ||  ||||| ||||||||| | |||||||||||||| | |||||||||||||| || | ||||||||||  ||||||||    
T  10507816 ttttgtgtggctttcgaattggtttccgacccaccagtggtggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgttcc 10507721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 12036764 - 12036831
Alignment:
Q  144 ccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||||||  |||||||| ||||||| ||| ||||||||||||| |||||||||||||  |||||||||    
T  12036764 ccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgttcccc 12036831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 33418126 - 33418229
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgt-tcccctggaaatcgaacccggtattcc 233  Q
    ||||| |||| |||||  |||||||||||||| | ||| ||| ||||||||| ||||||||||||| |||||  ||||| | ||||||| |||||||||     
T  33418126 gtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattct 33418225  T
Q  234 ccgg 237  Q
    ||||    
T  33418226 ccgg 33418229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 40288511 - 40288590
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccg 236  Q
    ||||||||| | ||| || |||||||||| |  |||||||||  |||||||||| |||||||||||||||||||||||||    
T  40288511 cgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggtattccccg 40288590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 31576577 - 31576655
Alignment:
Q  154 tggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtatt 231  Q
    ||||||||||| | | |||||||||||||||| ||||| ||||||||  ||| ||||||||  ||||||||||||||||    
T  31576577 tggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaacccggtatt 31576655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 25165454 - 25165397
Alignment:
Q  178 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 235  Q
    ||||||||| |||||||||  |||||||||||||||  ||||||| ||||||||||||    
T  25165454 tagaggcatgcgcactggcagagtgttgttcccctgataatcgaatccggtattcccc 25165397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 26258803 - 26258690
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaac 223  Q
    |||| ||| |||||||  |||||| ||  |||||||| ||||| |||||||||||| ||||||  |||||| ||||| |||||   ||||  |||||||     
T  26258803 cttttgcaccagtttccaacccactaaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaagcgttgtcttcctgagaatcgaat 26258704  T
Q  224 ccggtattccccgg 237  Q
    ||||||||||||||    
T  26258703 ccggtattccccgg 26258690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 9853289 - 9853385
Alignment:
Q  136 tttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtatt 231  Q
    |||||||||||||||  |||||||| |||||||  || || |||||||||| ||||||||  ||  |||| ||||||| | ||||||||||||||||    
T  9853289 tttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtatt 9853385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 17389880 - 17389764
Alignment:
Q  123 gctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaa 222  Q
    ||||||||| | ||||| |||||| ||  | |||||||||||||   ||||||||| ||||||| |||||||| |||   ||||||||| | ||||||||    
T  17389880 gctttcgcaccggtttccgacccatcagcaatggacgactaatccagctcatgcgtggaggcatgcgcactggtcaaacattgttcccccgaaaatcgaa 17389781  T
Q  223 cccggtattccccggaa 239  Q
     ||| |||| |||||||    
T  17389780 tccgatatttcccggaa 17389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 18649381 - 18649461
Alignment:
Q  153 gtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 232  Q
    |||| ||| ||||||| ||| | ||||||||||| |||||||| |||| |||||| |||||| |||||||||||| |||||    
T  18649381 gtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattc 18649461  T

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Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 16956579 - 16956460
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaa 217  Q
    |||||||||||||   ||||| ||||||||||  |||   |||||||| | ||| ||||||||||||| |||||||| |||  |||||| ||||||  ||    
T  16956579 ttttgctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaa 16956480  T
Q  218 tcgaacccggtattccccgg 237  Q
     ||||| |||||||||||||    
T  16956479 ccgaacacggtattccccgg 16956460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 8905215 - 8905265
Alignment:
Q  188 cgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 238  Q
    ||||||||||||| ||||||||||| ||||||| ||||| ||||| |||||    
T  8905215 cgcactggccaagcgttgttccccttgaaatcgtacccgatattctccgga 8905265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 6563513 - 6563444
Alignment:
Q  160 actaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggt 228  Q
    ||||||||| ||| ||||||||| |||  |||||||||||| |||||| ||||| | |||||||||||||    
T  6563513 actaatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggt 6563444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 40226233 - 40226325
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    |||| |||| |||||||||| ||||| |||| || ||| ||||| |||||||||||||  ||||||||||||| |  |||| ||||| ||||||    
T  40226233 ttttctttttctttcgcatc-gtttccgaccaactaatggtggatgactaatctgacttgtgcgtagaggcatgcatactgaccaagcgttgtt 40226325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 5504149 - 5504077
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcat 186  Q
    |||| |||| |||||| | | ||||| |||||| |||  |||||||||||||| | |||||||||||||||||    
T  5504149 tttttttttactttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcat 5504077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 35211183 - 35211275
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccg 226  Q
    ||||| ||||||||||  |||||||||||||    ||||||||||||||||| || | |||| |||  |||||||  ||||||||||||||||    
T  35211183 gtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcatgcgtattggctaagcattgttccttctggaaatcgaacccg 35211275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 6975 - 6851
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| ||||||||||  |||  ||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  6975 tttttttttgctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 6876  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    || ||||||||||||||||||||||    
T  6875 gggaatcgaacccggtattccccgg 6851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 6077 - 5969
Alignment:
Q  129 gcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggt 228  Q
    ||||| ||||| ||||||||||| |||||||||||||  | |||||||||||||||||  |||||||||||| ||||| |||||||||||||||||| ||    
T  6077 gcatcggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttgtccccctggaaatcgaacccagt 5978  T
Q  229 attccccgg 237  Q
    |||||||||    
T  5977 attccccgg 5969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 8690 - 8810
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| ||||||| ||||||||||  ||||||||||||||   ||||||||||||||||  ||||||||||||| |||||| |||||    
T  8690 ttttttttagctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccct 8789  T
Q  213 ggaaatcgaacccggtattcc 233  Q
    || ||||||||||||||||||    
T  8790 gggaatcgaacccggtattcc 8810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 9944 - 9845
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 233  Q
    ||||||||||||||||  |||||||||||||| | ||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  9944 gtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcc 9845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 690 - 566
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||||||||||||| | ||||| ||||||||||  |||  ||||||||||| ||||| ||||||||||| | |||||  ||||||||||| |||||    
T  690 tttttttttgctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccct 591  T
Q  213 ggaaatcgaacccggtattccccgg 237  Q
    |  ||||||||||||||||||||||    
T  590 gcgaatcgaacccggtattccccgg 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 319542 - 319417
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccct 212  Q
    |||| ||| ||||||||| | ||||| | ||||||||  ||||||||||||||   ||||||| |||||| || ||||||||||||| |||||| |||||    
T  319542 ttttttttggctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccct 319443  T
Q  213 ggaaatcgaacccggtattccccgga 238  Q
     |||||| ||||||||||||||||||    
T  319442 agaaatcaaacccggtattccccgga 319417  T

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Target: scaffold0316 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 1610 - 1725
Alignment:
Q  121 ttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatc 219  Q
    ||||||||||| | ||||  ||||||||||  |||| |||||||| || ||||||||||||||||| ||||||||| ||  |||||| ||||||||||||    
T  1610 ttgctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatc 1709  T
Q  220 gaacccggtattcccc 235  Q
    ||||| ||||||||||    
T  1710 gaacctggtattcccc 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 12693 - 12577
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctg 213  Q
    |||||||| ||||||||| | |||||| | ||| |||  |||| ||||||||| ||||||||||||||||||| |||||||| |||| |||||| ||||     
T  12693 ttttgtttggctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt-cccta 12595  T
Q  214 gaaatcgaacccggtatt 231  Q
    | ||||||||||||||||    
T  12594 ggaatcgaacccggtatt 12577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 26282 - 26181
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 233  Q
    ||||| ||| || |||| |||||||||||||| | ||| ||||||||||||| | ||||||||||| |||||| |||||||||||||||||| |||||||    
T  26282 gtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtattcc 26183  T
Q  234 cc 235  Q
    ||    
T  26182 cc 26181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 42818 - 42943
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-c 209  Q
    ||||||| |||| |||||||| | ||||| ||||||||||  |||| ||||||||| | |||||| |||||||||| ||||||| |||||  |||||| |    
T  42818 ttatttttttttactttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctc 42917  T
Q  210 cctggaaatcgaacccggtattcccc 235  Q
    ||| | ||||||||||| ||||||||    
T  42918 cctaggaatcgaacccgatattcccc 42943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 9551 - 9434
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcg-------tagaggcatacgcactggccaagtgttgtt-cccctggaa 216  Q
    ||||||| | ||||||||||||||||  ||||||||||||| || ||||||||       ||||||||| |  |||||||||| |||||| ||||||| |    
T  9551 tttcgcaccggtttctgacccaccaaaggtggacgactaatttggctcatgcgtagaacttagaggcat-cttactggccaagcgttgttccccctggga 9453  T
Q  217 atcgaacccggtattcccc 235  Q
    |||||||||||||||||||    
T  9452 atcgaacccggtattcccc 9434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 8231 - 8171
Alignment:
Q  177 gtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 237  Q
    |||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  8231 gtagaggcatgcgcactggccaagcgttgttcccttgggaatcgaacccggtattccccgg 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 12785 - 12666
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcc-cctggaaa 217  Q
    |||| |||||||| | |||||||||||| |||  |||| ||||||||| |  || ||||||||||||| | ||||||||||| |||||||| |||   ||    
T  12785 ttttactttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaa 12686  T
Q  218 tcgaacccggtattccccgg 237  Q
    ||||||||||||||||||||    
T  12685 tcgaacccggtattccccgg 12666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 25207 - 25100
Alignment:
Q  112 tattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||||| |||| |||||||| | ||||| || |||||||  |||||||| |||||||| |||||||||||  ||| ||||||| |||| |||||||||||    
T  25207 tattttatttttctttcgcaccggtttccgatccaccaaaggtggacgattaatctgattcatgcgtagaaacatgcgcactgtccaaatgttgttcccc 25108  T
Q  212 tggaaatc 219  Q
    || |||||    
T  25107 tgaaaatc 25100  T

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Target: scaffold0004 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 7845 - 7948
Alignment:
Q  135 gtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcc 233  Q
    ||||| || |||||||  |||| |||||||||   || |||||||||||||| ||||||||||||||||| |||||| ||| |||| |||||||||||||    
T  7845 gtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaacccggtattcc 7944  T
Q  234 ccgg 237  Q
    ||||    
T  7945 ccgg 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 94991 - 95093
Alignment:
Q  136 tttctgacccaccaa-tagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 234  Q
    |||| |||||||||| | |||| ||||||||| | |||||||||| |||||| |||||||| |||  |||||| || | ||||||||||| |||||||||    
T  94991 tttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtttcc-tagaaatcgaacctggtattccc 95089  T
Q  235 cgga 238  Q
    ||||    
T  95090 cgga 95093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 72708 - 72631
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccct-ggaaatcgaacccggtattccc 234  Q
    ||||||||| | || |||| | ||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  72708 cgactaatccggcttatgctttgaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattccc 72631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 41120 - 41043
Alignment:
Q  158 cgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattccc 234  Q
    ||||||||| | ||| ||||||||||||| | ||||| ||||||||||||||||| || ||||||||||| |||||||    
T  41120 cgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatattccc 41043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 155700 - 155797
Alignment:
Q  114 ttttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    |||| ||| ||||||||| | | ||| ||||||||||  |||| ||||||||| | ||| ||||||||||||| |||||| |||||| ||||||||||    
T  155700 ttttttttggctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcccc 155797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 25784 - 25896
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaac 223  Q
    ||||||| | ||||||||||||  ||  ||||  ||||||||||  ||| |||||||| ||| ||||||||||||| ||||||| |||| | ||||||||    
T  25784 tttcgcaccggtttctgacccagtaaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaac 25883  T
Q  224 ccggtattccccg 236  Q
    |  ||||||||||    
T  25884 cttgtattccccg 25896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 149500 - 149408
Alignment:
Q  119 ttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||||||| ||| | ||||||||||||||| | |||| ||||||||||  ||| | ||||||||||| | |||||| |||| ||||||||||    
T  149500 ttttgcttttgcaccggtttctgacccaccattggtgggcgactaatctacctcgtacgtagaggcatgcacactggtcaagcgttgttcccc 149408  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 16989 - 16906
Alignment:
Q  124 ctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt 207  Q
    |||||||||| |||||  |||||||||  |||  ||||||||||| ||| ||||||||| ||||||||||| ||||| ||||||    
T  16989 ctttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtt 16906  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 65138 - 65239
Alignment:
Q  111 ttattttgttttgctttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttccc 210  Q
    ||||||| ||| ||||||||| | ||||| || | | ||| ||||  |||||||||   ||||||||||||| ||| ||||||||||||| |||||||||    
T  65138 ttattttttttagctttcgcaccggtttccgatctatcaaaagtgagcgactaatccagctcatgcgtagagacatgcgcactggccaagcgttgttccc 65237  T
Q  211 ct 212  Q
    ||    
T  65238 ct 65239  T

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Target: scaffold0332 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 237
Target Start/End: Complemental strand, 15358 - 15327
Alignment:
Q  206 ttcccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||||||||||||||||||||||||||    
T  15358 ttcccctggaaatcgaacccggtattccccgg 15327  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 68607 - 68513
Alignment:
Q  141 gacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 237  Q
    ||||||||||  |||| ||||||||| | ||| ||||||||||||| |||||   ||||| |||||| ||||||| ||||||||||| |||| |||||    
T  68607 gacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgg 68513  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 19364 - 19278
Alignment:
Q  125 tttcgcatcagtttctgacccaccaatagtggacgactaatctgactcatgcgtagaggcatacgcactggccaagtgttgttcccc 211  Q
    ||||||| | ||||| || |||| |||| ||| ||||||||| | ||||||||||||||  | |||||| |||||| ||||||||||    
T  19364 tttcgcaccggtttccgatccactaataatggccgactaatccggctcatgcgtagaggtctgcgcactagccaagcgttgttcccc 19278  T

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Target: scaffold0341 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 18706 - 18637
Alignment:
Q  160 actaatctgactcatgcgtagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggt 228  Q
    ||||||||| ||| ||||||||| |||  |||||||||||| |||||| ||||| | |||||||||||||    
T  18706 actaatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggt 18637  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 271123 - 271187
Alignment:
Q  174 tgcgtagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 237  Q
    ||||||||| ||| ||||||| ||||| |||||||||| ||| ||||||||||| ||||| ||||    
T  271123 tgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgg 271187  T

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