View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17215_low_32 (Length: 345)

Name: NF17215_low_32
Description: NF17215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17215_low_32
NF17215_low_32
[»] chr4 (45 HSPs)
chr4 (260-310)||(21045144-21045194)
chr4 (260-310)||(47321132-47321182)
chr4 (260-310)||(50072269-50072319)
chr4 (262-310)||(11835097-11835145)
chr4 (260-310)||(1868212-1868262)
chr4 (260-310)||(6232148-6232198)
chr4 (260-310)||(19282524-19282574)
chr4 (260-310)||(29840063-29840113)
chr4 (260-310)||(31941546-31941596)
chr4 (260-310)||(37445648-37445698)
chr4 (260-310)||(45903519-45903569)
chr4 (260-310)||(56556367-56556417)
chr4 (22-135)||(3978705-3978816)
chr4 (260-309)||(31817289-31817338)
chr4 (260-310)||(6231645-6231695)
chr4 (260-310)||(6461997-6462047)
chr4 (264-310)||(6510110-6510156)
chr4 (260-310)||(15501259-15501309)
chr4 (260-310)||(24259599-24259649)
chr4 (260-310)||(32141076-32141126)
chr4 (260-310)||(34124283-34124333)
chr4 (260-310)||(35928479-35928529)
chr4 (260-310)||(38692402-38692452)
chr4 (264-310)||(45520571-45520617)
chr4 (260-310)||(51930588-51930638)
chr4 (260-310)||(52732587-52732637)
chr4 (260-310)||(54091946-54091996)
chr4 (261-310)||(30022057-30022106)
chr4 (274-310)||(31987306-31987342)
chr4 (260-310)||(4408292-4408342)
chr4 (260-310)||(28116233-28116283)
chr4 (276-310)||(30492732-30492766)
chr4 (260-310)||(32141237-32141287)
chr4 (260-310)||(34096003-34096053)
chr4 (260-310)||(39671195-39671245)
chr4 (260-310)||(43421229-43421279)
chr4 (260-310)||(44855230-44855280)
chr4 (260-310)||(45889552-45889601)
chr4 (260-310)||(51434371-51434421)
chr4 (260-310)||(54233834-54233884)
chr4 (260-310)||(55548337-55548387)
chr4 (260-309)||(3093341-3093390)
chr4 (260-309)||(28653067-28653116)
chr4 (261-310)||(54512021-54512070)
chr4 (260-296)||(17499845-17499881)
[»] chr2 (23 HSPs)
chr2 (260-310)||(33093359-33093409)
chr2 (260-310)||(34225764-34225814)
chr2 (255-310)||(1298891-1298946)
chr2 (260-310)||(4536565-4536615)
chr2 (260-310)||(4766299-4766349)
chr2 (260-310)||(29795301-29795351)
chr2 (260-310)||(43388768-43388818)
chr2 (260-308)||(45372645-45372693)
chr2 (260-310)||(775996-776046)
chr2 (260-310)||(1360168-1360218)
chr2 (260-310)||(4840838-4840888)
chr2 (260-310)||(10580969-10581019)
chr2 (260-310)||(14698003-14698053)
chr2 (260-310)||(24775180-24775230)
chr2 (260-310)||(43344332-43344382)
chr2 (260-310)||(45148063-45148113)
chr2 (261-306)||(14511452-14511497)
chr2 (274-310)||(14378335-14378371)
chr2 (260-310)||(4566234-4566284)
chr2 (260-310)||(42969890-42969940)
chr2 (260-290)||(43427419-43427449)
chr2 (269-310)||(7743401-7743442)
chr2 (274-310)||(40987382-40987418)
[»] chr6 (18 HSPs)
chr6 (261-310)||(4123966-4124015)
chr6 (260-310)||(4132086-4132136)
chr6 (260-310)||(32258713-32258763)
chr6 (259-310)||(30627081-30627132)
chr6 (260-310)||(1924775-1924825)
chr6 (260-310)||(29915532-29915582)
chr6 (260-310)||(29927198-29927248)
chr6 (260-310)||(31275753-31275803)
chr6 (264-311)||(19689944-19689991)
chr6 (272-310)||(3015919-3015957)
chr6 (260-310)||(12828792-12828842)
chr6 (260-310)||(17345247-17345297)
chr6 (260-309)||(34439525-34439574)
chr6 (260-296)||(19416850-19416886)
chr6 (267-310)||(8052343-8052386)
chr6 (260-310)||(11785213-11785262)
chr6 (260-310)||(30626860-30626910)
chr6 (268-309)||(23936694-23936735)
[»] chr8 (30 HSPs)
chr8 (260-310)||(14541857-14541907)
chr8 (260-310)||(36915358-36915408)
chr8 (259-310)||(2803349-2803400)
chr8 (267-310)||(11257540-11257583)
chr8 (260-310)||(38329141-38329191)
chr8 (260-310)||(42946113-42946163)
chr8 (270-310)||(16208951-16208991)
chr8 (266-310)||(22601133-22601177)
chr8 (260-311)||(3203318-3203369)
chr8 (271-310)||(41790229-41790268)
chr8 (260-310)||(1774171-1774221)
chr8 (260-310)||(7129292-7129342)
chr8 (260-306)||(7612489-7612535)
chr8 (261-310)||(8382589-8382639)
chr8 (260-310)||(27109932-27109982)
chr8 (260-310)||(27416492-27416542)
chr8 (272-310)||(34168317-34168355)
chr8 (260-310)||(45187396-45187446)
chr8 (260-297)||(11335833-11335870)
chr8 (269-310)||(34461696-34461737)
chr8 (261-295)||(156233-156267)
chr8 (260-310)||(8471272-8471322)
chr8 (260-310)||(18666632-18666682)
chr8 (260-310)||(32061535-32061585)
chr8 (272-310)||(32326837-32326875)
chr8 (264-310)||(33870749-33870795)
chr8 (260-306)||(39970316-39970362)
chr8 (269-310)||(3095615-3095656)
chr8 (277-310)||(8107271-8107304)
chr8 (270-310)||(13108989-13109029)
[»] chr7 (28 HSPs)
chr7 (260-310)||(18733445-18733495)
chr7 (264-310)||(22597226-22597272)
chr7 (260-310)||(40298839-40298889)
chr7 (255-310)||(5722990-5723045)
chr7 (260-310)||(1103476-1103526)
chr7 (260-310)||(3681034-3681084)
chr7 (260-310)||(18886661-18886711)
chr7 (260-310)||(19288459-19288509)
chr7 (260-310)||(28044243-28044293)
chr7 (260-310)||(32275196-32275246)
chr7 (260-310)||(32345947-32345997)
chr7 (264-310)||(36836055-36836101)
chr7 (260-310)||(41906045-41906095)
chr7 (259-310)||(36447182-36447233)
chr7 (260-310)||(17869229-17869279)
chr7 (260-310)||(30514965-30515015)
chr7 (260-310)||(31416863-31416913)
chr7 (260-310)||(36447713-36447763)
chr7 (260-310)||(40207489-40207539)
chr7 (260-310)||(42044091-42044141)
chr7 (260-310)||(42121542-42121592)
chr7 (260-309)||(19906406-19906455)
chr7 (258-310)||(40805014-40805066)
chr7 (262-310)||(43813456-43813504)
chr7 (260-290)||(715993-716023)
chr7 (260-310)||(22627458-22627508)
chr7 (261-290)||(42753700-42753729)
chr7 (274-310)||(19920383-19920419)
[»] chr5 (36 HSPs)
chr5 (260-310)||(793717-793767)
chr5 (260-310)||(14980150-14980200)
chr5 (260-310)||(36660419-36660469)
chr5 (259-310)||(12992055-12992106)
chr5 (267-310)||(27810345-27810388)
chr5 (260-310)||(166760-166810)
chr5 (260-310)||(31557446-31557496)
chr5 (260-310)||(32690842-32690892)
chr5 (260-310)||(33822614-33822664)
chr5 (260-310)||(34171156-34171206)
chr5 (260-310)||(42329657-42329707)
chr5 (267-310)||(4742378-4742421)
chr5 (267-310)||(4751642-4751685)
chr5 (260-315)||(12167688-12167743)
chr5 (259-310)||(13066704-13066755)
chr5 (260-310)||(4371355-4371405)
chr5 (260-310)||(27658683-27658733)
chr5 (260-310)||(31889734-31889784)
chr5 (260-310)||(33585086-33585136)
chr5 (260-310)||(34919745-34919795)
chr5 (260-310)||(39059798-39059848)
chr5 (260-310)||(41845393-41845443)
chr5 (263-296)||(24436585-24436618)
chr5 (260-309)||(33741457-33741506)
chr5 (267-310)||(17674207-17674250)
chr5 (260-311)||(32963117-32963168)
chr5 (260-310)||(4833744-4833794)
chr5 (260-310)||(7731704-7731754)
chr5 (105-135)||(7976183-7976213)
chr5 (260-290)||(21319442-21319472)
chr5 (260-310)||(28316705-28316755)
chr5 (260-310)||(29653625-29653675)
chr5 (260-310)||(38982256-38982306)
chr5 (261-310)||(7388292-7388341)
chr5 (274-310)||(15400177-15400213)
chr5 (274-310)||(29051623-29051659)
[»] chr3 (40 HSPs)
chr3 (260-310)||(43580467-43580517)
chr3 (260-310)||(46363122-46363172)
chr3 (262-310)||(22414749-22414797)
chr3 (267-310)||(26965610-26965653)
chr3 (260-310)||(790088-790138)
chr3 (260-310)||(1341031-1341081)
chr3 (264-310)||(19552536-19552582)
chr3 (260-310)||(25722572-25722622)
chr3 (260-310)||(32304016-32304066)
chr3 (260-310)||(34059868-34059918)
chr3 (260-310)||(36771678-36771728)
chr3 (260-310)||(37225706-37225756)
chr3 (262-310)||(5244580-5244628)
chr3 (267-310)||(83295-83338)
chr3 (263-310)||(43599932-43599979)
chr3 (260-311)||(44648511-44648562)
chr3 (260-310)||(2568114-2568164)
chr3 (260-310)||(4391896-4391946)
chr3 (264-310)||(13485916-13485962)
chr3 (260-310)||(20512608-20512658)
chr3 (268-310)||(27483295-27483337)
chr3 (272-310)||(35239390-35239428)
chr3 (260-310)||(43169326-43169376)
chr3 (260-310)||(45095545-45095595)
chr3 (260-310)||(49470781-49470831)
chr3 (260-310)||(51381713-51381763)
chr3 (260-310)||(54933316-54933366)
chr3 (260-305)||(2988725-2988770)
chr3 (107-138)||(2995867-2995898)
chr3 (267-310)||(3000751-3000794)
chr3 (260-311)||(36310360-36310411)
chr3 (267-310)||(44854314-44854357)
chr3 (267-310)||(50420258-50420301)
chr3 (260-310)||(25061696-25061746)
chr3 (264-310)||(31291075-31291121)
chr3 (268-310)||(38457460-38457502)
chr3 (260-310)||(43687997-43688047)
chr3 (260-290)||(44676212-44676242)
chr3 (260-310)||(54261407-54261457)
chr3 (270-310)||(36541493-36541533)
[»] chr1 (35 HSPs)
chr1 (260-310)||(24041112-24041162)
chr1 (260-310)||(44583763-44583813)
chr1 (262-310)||(5317688-5317736)
chr1 (267-310)||(11650056-11650099)
chr1 (268-310)||(1430624-1430666)
chr1 (260-310)||(2458999-2459049)
chr1 (260-310)||(6332157-6332207)
chr1 (260-310)||(38132279-38132329)
chr1 (260-310)||(40061008-40061058)
chr1 (260-310)||(48259965-48260015)
chr1 (260-310)||(50158418-50158468)
chr1 (260-305)||(15647177-15647222)
chr1 (260-308)||(26252109-26252157)
chr1 (260-310)||(84605-84655)
chr1 (268-310)||(11134572-11134614)
chr1 (260-310)||(12851732-12851782)
chr1 (260-310)||(43755044-43755094)
chr1 (261-306)||(22664931-22664976)
chr1 (268-308)||(1428865-1428905)
chr1 (274-310)||(40719020-40719056)
chr1 (260-308)||(43738367-43738415)
chr1 (270-310)||(45377261-45377301)
chr1 (255-310)||(9552441-9552496)
chr1 (260-310)||(28751519-28751570)
chr1 (264-311)||(43105691-43105738)
chr1 (260-310)||(255025-255075)
chr1 (260-310)||(12002237-12002287)
chr1 (260-310)||(15698862-15698912)
chr1 (260-310)||(42650361-42650411)
chr1 (260-310)||(44024536-44024586)
chr1 (264-310)||(44582891-44582937)
chr1 (260-290)||(50249301-50249331)
chr1 (260-310)||(50349967-50350019)
chr1 (274-310)||(2245791-2245827)
chr1 (270-310)||(17919931-17919971)
[»] scaffold0194 (1 HSPs)
scaffold0194 (260-310)||(8149-8199)
[»] scaffold0047 (1 HSPs)
scaffold0047 (260-310)||(70566-70616)
[»] scaffold0519 (1 HSPs)
scaffold0519 (267-309)||(7811-7852)
[»] scaffold0332 (1 HSPs)
scaffold0332 (260-290)||(3942-3972)
[»] scaffold0003 (1 HSPs)
scaffold0003 (260-310)||(321717-321767)
[»] scaffold0580 (2 HSPs)
scaffold0580 (260-296)||(1632-1668)
scaffold0580 (260-296)||(9371-9407)


Alignment Details
Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 21045144 - 21045194
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21045144 aaaaaatttgtttcaaaatgaatgtcactttacattttcaatacaacttta 21045194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 47321132 - 47321182
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  47321132 aaaaaatttgttttaaaatgaatgtcactttacattttcaatacaacttta 47321182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 50072269 - 50072319
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  50072269 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 50072319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 11835097 - 11835145
Alignment:
Q  262 aaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  11835097 aaaatttatttcaaaatgaatgtcactttacatttttaatataacttta 11835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 1868262 - 1868212
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  1868262 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatgcaacttta 1868212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 6232198 - 6232148
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  6232198 aaaaaatttgtttcaaaataaatgtcaatttacattttcaatacaacttta 6232148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 19282574 - 19282524
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  19282574 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 19282524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 29840063 - 29840113
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  29840063 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 29840113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 31941546 - 31941596
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  31941546 aaaaaaattgttttaaaatgaatgtcactttacattttcaatacaacttta 31941596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 37445648 - 37445698
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  37445648 aaaaaaattgttttaaaatgaatgtcattttacatttttaatacaacttta 37445698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 45903569 - 45903519
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  45903569 aaaaaaattatttcaaaatgaatgtcactttacattttcaatacaacttta 45903519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 56556417 - 56556367
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  56556417 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 56556367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 3978705 - 3978816
Alignment:
Q  22 ctattacaaaattgatcttatgcactccaaatttgtgtaactttgtttttaacggcactccttatcggaaactatctgggagcctatgtttcttctctta 121  Q
    ||||||| |||||||| ||||| ||||||| | | || || |||||||||| ||| |||||||||| ||  ||||||||||||   | ||||||||||||    
T  3978705 ctattacgaaattgat-ttatgtactccaagtctttggaagtttgtttttaccggtactccttatctgagtctatctgggagcag-tatttcttctctta 3978802  T
Q  122 aacatgtagatatt 135  Q
    ||||||||||||||    
T  3978803 aacatgtagatatt 3978816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 31817338 - 31817289
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttt 309  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||    
T  31817338 aaaaaatttgtttcaaaatgaatgtcactttacatttccaatgcaacttt 31817289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 6231645 - 6231695
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||| |||| || ||||||||||    
T  6231645 aaaaaaattgtttcaaaatgaatgtcactttatatttatagtacaacttta 6231695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 6461997 - 6462047
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||| ||||||||||  ||||||||||||    
T  6461997 aaaaaaattgtttcaaaatgaatgtcgctttacatttccaatacaacttta 6462047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 6510110 - 6510156
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  6510110 aatttgtttcaaaataaatgtcactttatattttcaatacaacttta 6510156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 15501309 - 15501259
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||||||||    
T  15501309 aaaaaaattgtttgaaaatgaatgtcactttacatttccaatacaacttta 15501259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 24259599 - 24259649
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||| ||||||||    
T  24259599 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatgcaacttta 24259649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 32141126 - 32141076
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||| ||||||||||||  ||||||||||||    
T  32141126 aaaaaaattgtttcaaaatgaatgccactttacatttccaatacaacttta 32141076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 34124283 - 34124333
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| |||||||||||| ||||||||||| ||| ||||||||    
T  34124283 aaaaaatttgttttaaaatgaatgtcgctttacattttcaatgcaacttta 34124333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 35928479 - 35928529
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||| ||| |||||||||||||| ||||||||||||    
T  35928479 aaaaaaattgtttcaaaataaatatcactttacattttcaatacaacttta 35928529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 38692402 - 38692452
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  38692402 aaaaaatttgttttaaaatgaatgtcactttacattttcaattaaacttta 38692452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 45520617 - 45520571
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  45520617 aatttattttaaaatgaatgtcactttacattttcaatacaacttta 45520571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 51930588 - 51930638
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  51930588 aaaaaatttgtttcaaaatgaatgtcgctttacatttccaatacaatttta 51930638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 52732587 - 52732637
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||||||||    
T  52732587 aaaaaaattgttttaaaatgaatgtcactttacatttccaatacaacttta 52732637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 54091946 - 54091996
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||||||||||    
T  54091946 aaaaaaattgttttaaaatgaatgtcaatttagatttttaatacaacttta 54091996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 30022057 - 30022106
Alignment:
Q  261 aaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||| |||| ||||||  ||||||||||||    
T  30022057 aaaaatttgtttcaaaatgaatgttacttgacatttccaatacaacttta 30022106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 31987306 - 31987342
Alignment:
Q  274 aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31987306 aaaatgaatgtcactttacatttctaatacaacttta 31987342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 4408342 - 4408292
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||| ||||||||| | ||| ||||||||    
T  4408342 aaaaaaattgtttcaaaatgaatgtcgctttacattctcaatgcaacttta 4408292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 28116233 - 28116283
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || ||||||||| |||||||||||||||||  ||||||||||||    
T  28116233 aaaaaaattatttcaaaataaatgtcactttacatttccaatacaacttta 28116283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Original strand, 30492732 - 30492766
Alignment:
Q  276 aatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||| ||||||||||||    
T  30492732 aatgaatgtcactttacattttcaatacaacttta 30492766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 32141287 - 32141237
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||| ||||||| | ||||| ||||||||||||    
T  32141287 aaaaaaattgtttcaaaatgaacgtcacttcatattttgaatacaacttta 32141237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 34096003 - 34096053
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||| |||||||| ||||||||| |||||||| ||||    
T  34096003 aaaaaaattgtttcaaaacgaatgtcaatttacatttctaatacaatttta 34096053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 39671245 - 39671195
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||  |||||||||  ||||||||||||    
T  39671245 aaaaaaattgtttcaaaatgaatgtcgttttacatttccaatacaacttta 39671195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 43421279 - 43421229
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| ||||||||||||||||| ||||||||||||||   |||||||||||    
T  43421279 aaaatatttgtttcaaaatgaaggtcactttacatttcccatacaacttta 43421229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 44855230 - 44855280
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||| |||| |||||||||||||||||  ||||||||||||    
T  44855230 aaaaaaattgtttcgaaataaatgtcactttacatttccaatacaacttta 44855280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 45889552 - 45889601
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||| | ||||||||| ||||||||||||    
T  45889552 aaaaaaattgtttcaaaatgaatgtcgc-ttacattttcaatacaacttta 45889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 51434421 - 51434371
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||| |||||||||| |||| ||||||||    
T  51434421 aaaaaaattgttttaaaatgaatgtcgctttacatttctaatgcaacttta 51434371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 54233834 - 54233884
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||||| | ||||||||||| ||||||||||||    
T  54233834 aaaaaaattatttcaaaatgaatgccgctttacattttcaatacaacttta 54233884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 55548387 - 55548337
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||| | |||||||||||||||| ||| ||||||||    
T  55548387 aaaaaaattgtttcaaaataagtgtcactttacattttcaatgcaacttta 55548337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 3093341 - 3093390
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttt 309  Q
    ||||| ||| ||| |||||||||||||||||||||||| |||| ||||||    
T  3093341 aaaaagtttattttaaaatgaatgtcactttacattttcaatataacttt 3093390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 28653067 - 28653116
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttt 309  Q
    |||||| |||||||||||| ||| |||||||||||||| |||||| ||||    
T  28653067 aaaaaaattgtttcaaaataaatatcactttacattttcaatacatcttt 28653116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 54512021 - 54512070
Alignment:
Q  261 aaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||| || ||| ||||||||| ||||||||||||||||||| |||||||    
T  54512021 aaaaaattattttaaaatgaatatcactttacatttttaatataacttta 54512070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 17499881 - 17499845
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacattt 296  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  17499881 aaaaaaattgtttcaaaatgaatgtcgctttacattt 17499845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 33093359 - 33093409
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33093359 aaaaaatttgtttcaaaatgaatgtcactttacattttcaatacaacttta 33093409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 34225764 - 34225814
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  34225764 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 34225814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 1298946 - 1298891
Alignment:
Q  255 aatataaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| |||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  1298946 aataaaaaaaaattatttcaaaatgaatgtcactttacatttctaatacaacttta 1298891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 4536565 - 4536615
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  4536565 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 4536615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 4766349 - 4766299
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  4766349 aaaaaatctgtttcaaaatgaatgtcaatttacattttcaatacaacttta 4766299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 29795351 - 29795301
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  29795351 aaaatatttgtttcaaaatgaatgtcactttacatttccaatacaacttta 29795301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 43388818 - 43388768
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  43388818 aaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaacttta 43388768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 45372693 - 45372645
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaactt 308  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  45372693 aaaaaaattgttttaaaatgaatgtcactttacattttcaatacaactt 45372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 776046 - 775996
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||| ||||||||||| ||| ||||||||    
T  776046 aaaaaaattgtttcaaaatgaatgtcgctttacattttcaatgcaacttta 775996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 1360168 - 1360218
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||||||| |||||  ||||||||||||    
T  1360168 aaaaaaattgtttcaaaatgaatgtcactttgcatttccaatacaacttta 1360218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 4840888 - 4840838
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  4840888 aaaaaaattgttccaaaatgaatgtcactttacatttccaatacaacttta 4840838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 10581019 - 10580969
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||| |||||||| ||||| ||||||||||||    
T  10581019 aaaaaaattgtttcaaaatgaatatcactttatattttcaatacaacttta 10580969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 14698003 - 14698053
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||| ||||||||||| ||| ||||||||    
T  14698003 aaaaaaattgtttcaaaatgaatgtcgctttacattttcaatgcaacttta 14698053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 24775180 - 24775230
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  24775180 aaaaaatttgttttaaaatgattgtcactttacattttcaatacaatttta 24775230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 43344382 - 43344332
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||| ||| ||||| ||||||||||||    
T  43344382 aaaaaaattgtttcaaaatgaatgtcaccttatattttcaatacaacttta 43344332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 45148113 - 45148063
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||| |||| |||||||    
T  45148113 aaaaaaattgttttaaaatgaatgtcactttacattttcaataaaacttta 45148063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 14511452 - 14511497
Alignment:
Q  261 aaaaatttgtttcaaaatgaatgtcactttacatttttaatacaac 306  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  14511452 aaaaatatgtttcaaaatgaatgtctctttacattttgaatacaac 14511497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 14378371 - 14378335
Alignment:
Q  274 aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||| ||||||||||||    
T  14378371 aaaatgaatgtcactttacattttcaatacaacttta 14378335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 4566284 - 4566234
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || ||| |||||  ||||||||||||||||||||||||||||||    
T  4566284 aaaaaaattattttaaaatatatgtcactttacatttttaatacaacttta 4566234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 42969890 - 42969940
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| |||| ||| ||||| |||||||||||||||||||||||| ||||||    
T  42969890 aaaatatttattttaaaataaatgtcactttacatttttaataccacttta 42969940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 43427449 - 43427419
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcacttt 290  Q
    |||||||||||||||||||||||||||||||    
T  43427449 aaaaaatttgtttcaaaatgaatgtcacttt 43427419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 310
Target Start/End: Original strand, 7743401 - 7743442
Alignment:
Q  269 gtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| |||||||||||||||||||||||  ||||||||||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaacttta 7743442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 40987418 - 40987382
Alignment:
Q  274 aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  40987418 aaaatgaatgtcgctttacattttcaatacaacttta 40987382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 4124015 - 4123966
Alignment:
Q  261 aaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4124015 aaaaaattgtttcaaaatgaatgtcactttacatttttaatacaacttta 4123966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 4132136 - 4132086
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  4132136 aaaaaaattgttttaaaatgaatgtcactttacatttttaatacaacttta 4132086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 32258713 - 32258763
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  32258713 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 32258763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 30627081 - 30627132
Alignment:
Q  259 taaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  30627081 taaaaaatttgtttcaaaataaatgtcactttatattttcaatacaacttta 30627132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 1924825 - 1924775
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  1924825 aaaaaatttgttttaaaatgaatgtcattttacattttcaatacaacttta 1924775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 29915532 - 29915582
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  29915532 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 29915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 29927198 - 29927248
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  29927198 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 29927248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 31275803 - 31275753
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  31275803 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 31275753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 19689991 - 19689944
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaactttat 311  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  19689991 aatttgttttaaaatgaatgttactttacatttctaatacaactttat 19689944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 3015919 - 3015957
Alignment:
Q  272 tcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  3015919 tcaaaatgaatgtcactttacattttcaatacaacttta 3015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 12828842 - 12828792
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  12828842 aaaaaaattgtttcaaaatgaatttcactttacatttccaatacaacttta 12828792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 17345297 - 17345247
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||| ||||||||||||| |||||||||||||    
T  17345297 aaaaaaattgttttaaaatgaatatcactttacatttctaatacaacttta 17345247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 34439574 - 34439525
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttt 309  Q
    |||||| |||||||||||||||||||| |||||||||  |||||||||||    
T  34439574 aaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaacttt 34439525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 19416850 - 19416886
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacattt 296  Q
    |||||| ||||||||||||||||||||||||||||||    
T  19416850 aaaaaaattgtttcaaaatgaatgtcactttacattt 19416886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 8052343 - 8052386
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||| |||| |||||||||||||    
T  8052343 ttgttttaaaatgaatgtcactttatatttctaatacaacttta 8052386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 11785262 - 11785213
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||| |||||||||||||||  ||||||||||||    
T  11785262 aaaaaaattgtttcaaaatga-tgtcactttacatttccaatacaacttta 11785213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 30626860 - 30626910
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||| ||| | |||||||||||| ||||||||||||    
T  30626860 aaaaaaattgtttcaaaataaatattactttacattttcaatacaacttta 30626910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 23936735 - 23936694
Alignment:
Q  268 tgtttcaaaatgaatgtcactttacatttttaatacaacttt 309  Q
    ||||||||||||||||| |||||||||||| ||| |||||||    
T  23936735 tgtttcaaaatgaatgttactttacattttcaatgcaacttt 23936694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 14541907 - 14541857
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  14541907 aaaaaaattgtttcaaaatgaatgtcactttacatttctaatacaacttta 14541857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 36915358 - 36915408
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  36915358 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 36915408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 2803400 - 2803349
Alignment:
Q  259 taaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  2803400 taaaaaatttgtttcaaaataaatgtcactttacattttcaatacaatttta 2803349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 11257540 - 11257583
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  11257540 ttgttttaaaatgaatgtcactttacatttttaatacaacttta 11257583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 38329191 - 38329141
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  38329191 aaaaaatttgttttaaaatgaatgtcactttatattttcaatacaacttta 38329141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 42946113 - 42946163
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  42946113 aaaaaagttgttttaaaatgaatgtcattttacatttttaatacaacttta 42946163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 16208951 - 16208991
Alignment:
Q  270 tttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  16208951 tttcaaaatgaatgtcactttacattttcaatacaacttta 16208991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 22601133 - 22601177
Alignment:
Q  266 tttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  22601133 tttgtttcaaaatgaatgtcactttacatttccaatacaacttta 22601177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 3203318 - 3203369
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaactttat 311  Q
    |||||| |||||||||||| |||||||||||||||||| ||| |||||||||    
T  3203318 aaaaaaattgtttcaaaataaatgtcactttacattttcaatgcaactttat 3203369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 310
Target Start/End: Complemental strand, 41790268 - 41790229
Alignment:
Q  271 ttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  41790268 ttcaaaatgaatgtcactttacatttctaatacaacttta 41790229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 1774221 - 1774171
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||||||| |||||||||| ||||||||||||    
T  1774221 aaaaaaattgttttaaaatgaatgtcaatttacattttcaatacaacttta 1774171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 7129292 - 7129342
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||||||||||||||||||| ||| ||||||||    
T  7129292 aaaaaaattatttcaaaatgaatgtcactttacattttcaatgcaacttta 7129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 7612489 - 7612535
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaac 306  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||||    
T  7612489 aaaaaaattgttttaaaatgaatgtcactttacattttcaatacaac 7612535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 8382639 - 8382589
Alignment:
Q  261 aaaaatttgtttc-aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  8382639 aaaaatttgtttttaaaatgaatgtcactttacattttcaatacaacttta 8382589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 27109982 - 27109932
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| |||||||||||||||||||||||||| |||||  ||||||||||||    
T  27109982 aaaatatttgtttcaaaatgaatgtcactttccatttccaatacaacttta 27109932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 27416492 - 27416542
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||||||||||||||||||  ||||||||||||    
T  27416492 aaaaaaattatttcaaaatgaatgtcactttacatttccaatacaacttta 27416542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 34168355 - 34168317
Alignment:
Q  272 tcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  34168355 tcaaaatgaatgtcactttacattttcaatacaacttta 34168317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 45187446 - 45187396
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  45187446 aaaatatttgtttcaaaataaatgtcactttatattttcaatacaacttta 45187396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 11335833 - 11335870
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttt 297  Q
    |||| |||||||||||||||||||||||||||||||||    
T  11335833 aaaatatttgtttcaaaatgaatgtcactttacatttt 11335870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 34461737 - 34461696
Alignment:
Q  269 gtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaacttta 34461696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Original strand, 156233 - 156267
Alignment:
Q  261 aaaaatttgtttcaaaatgaatgtcactttacatt 295  Q
    ||||| |||||||||||||||||||||||||||||    
T  156233 aaaaaattgtttcaaaatgaatgtcactttacatt 156267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 8471272 - 8471322
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||| ||||||||||  ||| ||||||||    
T  8471272 aaaaaaattgtttcaaaatgaatgtcgctttacatttccaatgcaacttta 8471322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 18666682 - 18666632
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||||||||||||||||||  ||| ||||||||    
T  18666682 aaaaaaattctttcaaaatgaatgtcactttacatttccaatgcaacttta 18666632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 32061585 - 32061535
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||||||||||||||||||  |||||| ||||    
T  32061585 aaaaaaattgttttaaaatgaatgtcactttacattttctatacaaattta 32061535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 32326875 - 32326837
Alignment:
Q  272 tcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  32326875 tcaaaataaatgtcactttacattttcaatacaacttta 32326837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 33870749 - 33870795
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||| |||||||||| ||||||||||| ||||| ||||||||||||    
T  33870749 aatttatttcaaaatggatgtcactttatattttcaatacaacttta 33870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 39970316 - 39970362
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaac 306  Q
    |||||| |||||||||||||||||| |||||||||||  ||||||||    
T  39970316 aaaaaaattgtttcaaaatgaatgttactttacatttccaatacaac 39970362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 3095656 - 3095615
Alignment:
Q  269 gtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| ||||||||||| |||||||||||| ||||||||||||    
T  3095656 gttttaaaatgaatgttactttacattttcaatacaacttta 3095615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 8107304 - 8107271
Alignment:
Q  277 atgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||| ||||||||||||    
T  8107304 atgaatgtcactttacattttcaatacaacttta 8107271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 13108989 - 13109029
Alignment:
Q  270 tttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||| |||||||||| ||| ||||||||    
T  13108989 tttcaaaatgaatgtcattttacattttcaatgcaacttta 13109029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 18733445 - 18733495
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  18733445 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 18733495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 22597226 - 22597272
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  22597226 aatttgtttcaaaatgaatgtcactttacattttcaatacaacttta 22597272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 40298839 - 40298889
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  40298839 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 40298889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 5722990 - 5723045
Alignment:
Q  255 aatataaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  5722990 aataaaaaaaaattgcttcaaaatgaatgtcactttacattttcaatacaacttta 5723045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 1103476 - 1103526
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  1103476 aaaaaatttgtttcaaaatgaatgtcattttacatttccaatacaacttta 1103526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 3681084 - 3681034
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  3681084 aaaaaaattgttttaaaatgaatgtcactttacattttcaatacaacttta 3681034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 18886661 - 18886711
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  18886661 aaaaaatttgttttaaaatgaatctcactttacattttcaatacaacttta 18886711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 19288509 - 19288459
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  19288509 aaaaaaattatttcaaaatgaatgtcactttacatttctaatacaacttta 19288459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 28044293 - 28044243
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  28044293 aaaaaaattgttttaaaatgaatgtcactttacattttcaatacaacttta 28044243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 32275196 - 32275246
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  32275196 aaaaaaattgtttcaaaatgaatgccactttacatttctaatacaacttta 32275246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 32345997 - 32345947
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  32345997 aaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaacttta 32345947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 36836055 - 36836101
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  36836055 aatttgtttcaaaatgaatgtcgctttacattttcaatacaacttta 36836101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 41906095 - 41906045
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  41906095 aaaaaatttgttttaaaataaatgtcactttacatttctaatacaacttta 41906045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 36447233 - 36447182
Alignment:
Q  259 taaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||| ||||    
T  36447233 taaaaaaattgtttcaaaatgaatgtcattttacattttcaatacaatttta 36447182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 17869229 - 17869279
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||||| |||||||||  ||| ||||||||    
T  17869229 aaaaaatttgtttcaaaatgaatgtcattttacatttccaatgcaacttta 17869279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 30514965 - 30515015
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||| |||||||||  ||||||||||||    
T  30514965 aaaaaaattgtttcaaaatgaatgtcaatttacatttccaatacaacttta 30515015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 31416913 - 31416863
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||| |||||||||||||| ||||||||||||    
T  31416913 aaaaaaattgttttaaaatgaatatcactttacattttcaatacaacttta 31416863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 36447763 - 36447713
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| ||||||||| |||||||| ||||| ||||||||||||    
T  36447763 aaaaaatttgttttaaaatgaatatcactttatattttcaatacaacttta 36447713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 40207539 - 40207489
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||| |||||||||||||||| |||| ||||||||||||||||||    
T  40207539 aaaaaaattgcttcaaaatgaatgtcattttatatttttaatacaacttta 40207489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 42044141 - 42044091
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || ||||||||| |||||||||||||||||| ||||||||||||    
T  42044141 aaaaaaattatttcaaaattaatgtcactttacattttcaatacaacttta 42044091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 42121542 - 42121592
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||| ||||  ||||||||||||    
T  42121542 aaaaaaattgtttcaaaatgaatgtcactttatatttccaatacaacttta 42121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 19906406 - 19906455
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttt 309  Q
    |||||| ||||||||||||||||||| ||||||||||  |||||||||||    
T  19906406 aaaaaaattgtttcaaaatgaatgtcgctttacatttccaatacaacttt 19906455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 40805014 - 40805066
Alignment:
Q  258 ataaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||| ||| ||||| |||||||||||||||||  ||||||||||||    
T  40805014 ataaaaaatttattttaaaataaatgtcactttacatttacaatacaacttta 40805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 43813504 - 43813456
Alignment:
Q  262 aaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||| |||||||||||||||||| ||||  ||||||||||||    
T  43813504 aaaatttgttttaaaatgaatgtcactttatatttccaatacaacttta 43813456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 716023 - 715993
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcacttt 290  Q
    |||||||||||||||||||||||||||||||    
T  716023 aaaaaatttgtttcaaaatgaatgtcacttt 715993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 22627508 - 22627458
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||  ||||||||||||||||||||||||  ||||||||||||    
T  22627508 aaaaaaattgtcccaaaatgaatgtcactttacatttccaatacaacttta 22627458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 42753700 - 42753729
Alignment:
Q  261 aaaaatttgtttcaaaatgaatgtcacttt 290  Q
    ||||||||||||||||||||||||||||||    
T  42753700 aaaaatttgtttcaaaatgaatgtcacttt 42753729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 19920419 - 19920383
Alignment:
Q  274 aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||  ||||||||||||    
T  19920419 aaaatgaatgtcactttacatttccaatacaacttta 19920383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 793767 - 793717
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  793767 aaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaacttta 793717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 14980200 - 14980150
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  14980200 aaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaacttta 14980150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 36660419 - 36660469
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  36660419 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 36660469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 12992055 - 12992106
Alignment:
Q  259 taaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  12992055 taaaaaaattgtttcaaaatgaatgtcattttacatttctaatacaacttta 12992106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 27810345 - 27810388
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaacttta 27810388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 166810 - 166760
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  166810 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 166760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 31557496 - 31557446
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  31557496 aaaaaaattgtttcaaaatgaatgtcattttacattttcaatacaacttta 31557446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 32690892 - 32690842
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  32690892 aaaaaatttatttcaaaatgaatgtcactttacatttcaaatacaacttta 32690842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 33822664 - 33822614
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  33822664 aaaaaaattgattcaaaatgaatgtcactttacattttcaatacaacttta 33822614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 34171156 - 34171206
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  34171156 aaaaaaattgttttaaaatgaatgtcactttacattttcaatacaacttta 34171206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 42329707 - 42329657
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  42329707 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 42329657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 310
Target Start/End: Complemental strand, 4742421 - 4742378
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  4742421 ttgtttcaaaatgaatgtcactttatatttctaatacaacttta 4742378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 310
Target Start/End: Complemental strand, 4751685 - 4751642
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  4751685 ttgtttcaaaatgaatgtcactttatatttctaatacaacttta 4751642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 12167743 - 12167688
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaactttatcctc 315  Q
    |||||| |||||| ||||||||||||||| |||||||| |||||||||||| ||||    
T  12167743 aaaaaaattgttttaaaatgaatgtcactctacattttcaatacaactttaccctc 12167688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 13066704 - 13066755
Alignment:
Q  259 taaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||||    
T  13066704 taaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaacttta 13066755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 4371355 - 4371405
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||| ||||||||||||||  ||||||||||||    
T  4371355 aaaaaaattgtttcaaaatgaacgtcactttacatttccaatacaacttta 4371405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 27658733 - 27658683
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  |||| |||||||    
T  27658733 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatataacttta 27658683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 31889734 - 31889784
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||||||||    
T  31889734 aaaaaaattgtttcaaaataaatgtcactttacatttccaatacaacttta 31889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 33585136 - 33585086
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||| ||||||||||||||| ||||||||||||    
T  33585136 aaaaaaattgttttaaaatgaacgtcactttacattttcaatacaacttta 33585086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 34919745 - 34919795
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  34919745 aaaaaaattgtttcaaaatgaatgtcactttacattcctaatataacttta 34919795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 39059798 - 39059848
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||  ||||||||||| ||||||||||||    
T  39059798 aaaaaaattgtttcaaaatgaatgttgctttacattttcaatacaacttta 39059848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 41845443 - 41845393
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||| ||||    
T  41845443 aaaaaatatatttcaaaatgaatgtcactttacattttcaatacaatttta 41845393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 296
Target Start/End: Complemental strand, 24436618 - 24436585
Alignment:
Q  263 aaatttgtttcaaaatgaatgtcactttacattt 296  Q
    ||||||||||||||||||||||||||||||||||    
T  24436618 aaatttgtttcaaaatgaatgtcactttacattt 24436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 33741457 - 33741506
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttt 309  Q
    |||||| ||||||||| ||||||||||||||||||||| ||| |||||||    
T  33741457 aaaaaaattgtttcaatatgaatgtcactttacattttcaatgcaacttt 33741506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 17674207 - 17674250
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||| |||| |||| |||||||    
T  17674207 ttgtttcaaaatgaatgtcactttacgttttcaataaaacttta 17674250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 32963168 - 32963117
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaactttat 311  Q
    ||||| |||||||||||||||||  ||||||||||||  |||||||||||||    
T  32963168 aaaaagtttgtttcaaaatgaataccactttacatttccaatacaactttat 32963117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 4833794 - 4833744
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||  ||||||||||| ||| ||||||||    
T  4833794 aaaaaaattgtttcaaaatgaatgttgctttacattttcaatgcaacttta 4833744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 7731754 - 7731704
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||| ||||| || |||||||||    
T  7731754 aaaaaaattgttttaaaatgaatgtcactttatattttcaaaacaacttta 7731704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 135
Target Start/End: Complemental strand, 7976213 - 7976183
Alignment:
Q  105 ctatgtttcttctcttaaacatgtagatatt 135  Q
    |||||||||||||||||||||||||||||||    
T  7976213 ctatgtttcttctcttaaacatgtagatatt 7976183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 21319472 - 21319442
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcacttt 290  Q
    |||||||||||||||||||||||||||||||    
T  21319472 aaaaaatttgtttcaaaatgaatgtcacttt 21319442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 28316705 - 28316755
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||| ||||||| |||| ||||| ||||||||||||    
T  28316705 aaaaaaattgtttcaaaataaatgtcattttatattttcaatacaacttta 28316755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 29653675 - 29653625
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||| |||||||||||||| |||||||||  ||||||||||||    
T  29653675 aaaaaaattgttgcaaaatgaatgtcattttacatttccaatacaacttta 29653625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 38982306 - 38982256
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||| ||||  ||||||||||||    
T  38982306 aaaaaaattgttttaaaatgaatgtcactttatatttccaatacaacttta 38982256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 7388341 - 7388292
Alignment:
Q  261 aaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||| |||||| |||||||||||||||||| ||||| ||||||| ||||    
T  7388341 aaaaaattgttttaaaatgaatgtcactttatattttcaatacaatttta 7388292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 15400177 - 15400213
Alignment:
Q  274 aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||  ||||||||||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaacttta 15400213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 29051659 - 29051623
Alignment:
Q  274 aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  29051659 aaaatgaatgtcactttacctttctaatacaacttta 29051623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 43580467 - 43580517
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  43580467 aaaaaatttgtttcaaaataaatgtcactttacattttcaatacaacttta 43580517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 46363172 - 46363122
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  46363172 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 46363122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 22414749 - 22414797
Alignment:
Q  262 aaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  22414749 aaaatttatttcaaaatgaatgtcactttacatttttaatataacttta 22414797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 310
Target Start/End: Complemental strand, 26965653 - 26965610
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  26965653 ttgtttcaaaatgaatgtcactttacattttcaatacaacttta 26965610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 790088 - 790138
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||    
T  790088 aaaaaatttgtttcaaaattaatgtcactttacatttccaatacaacttta 790138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 1341081 - 1341031
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  1341081 aaaaaatttattttaaaatgaatgtcactttacattttcaatacaacttta 1341031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 19552536 - 19552582
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  19552536 aatttgttttaaaatgaatgtcactttacattttcaatacaacttta 19552582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 25722622 - 25722572
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  25722622 aaaaaaattatttcaaaatgaatgtcactttacattttcaatacaacttta 25722572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 32304066 - 32304016
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  32304066 aaaaaatttgttttgaaatgaatgtcactttacattttcaatacaacttta 32304016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 34059868 - 34059918
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  34059868 aaaaaatttgttttaaaatgaatgtcattttacattttcaatacaacttta 34059918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 36771728 - 36771678
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  36771728 aaaaaatttgttttaaaatgaatgtcactttacatttacaatacaacttta 36771678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 37225756 - 37225706
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  37225756 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 37225706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 5244580 - 5244628
Alignment:
Q  262 aaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  5244580 aaaatttgttttaaaatgaatgtcaccttacatttttaatataacttta 5244628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 83295 - 83338
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  83295 ttgtttcaaaatgaatgtcattttacattttcaatacaacttta 83338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 43599979 - 43599932
Alignment:
Q  263 aaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||    
T  43599979 aaatttgtttcaaaatgaatgtcgttttacatttttcatacaacttta 43599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 44648562 - 44648511
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaactttat 311  Q
    |||||| |||||| |||||||||||||||||||||||  |||||||||||||    
T  44648562 aaaaaaattgttttaaaatgaatgtcactttacatttccaatacaactttat 44648511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 2568164 - 2568114
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||||| |||||||||||| ||||||||||||    
T  2568164 aaaaaaattgttttaaaatgaatgttactttacattttcaatacaacttta 2568114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 4391896 - 4391946
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||    
T  4391896 aaaaaatttgttttaaaatgaatatcactttacatttttagtacaatttta 4391946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 13485962 - 13485916
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||    
T  13485962 aatttgtttcaaaatgaatgtcaatttacatttccaatacaacttta 13485916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 20512658 - 20512608
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||| ||||||||||| ||| ||||||||    
T  20512658 aaaaaaattgtttcaaaatgaatgtcgctttacattttcaatgcaacttta 20512608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 27483337 - 27483295
Alignment:
Q  268 tgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  27483337 tgtttcaaaatgaatgtcactttacatttccaatacaacttta 27483295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 35239390 - 35239428
Alignment:
Q  272 tcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  35239390 tcaaaatgaatgtcactttacatttctaatacaacttta 35239428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 43169326 - 43169376
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||| |||||||||  ||||||||||||    
T  43169326 aaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaacttta 43169376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 45095545 - 45095595
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||||    
T  45095545 aaaaaaattattttaaaatgaatgtcactttacattttcaatacaacttta 45095595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 49470781 - 49470831
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||  |||||||||| ||||||||||||    
T  49470781 aaaaaaattgtttcaaaatgaatgtcgttttacattttcaatacaacttta 49470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 51381713 - 51381763
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||||||||    
T  51381713 aaaaaaattgtttcaaaataaatgtcactttacatttacaatacaacttta 51381763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 54933366 - 54933316
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||| ||||||||    
T  54933366 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatgcaacttta 54933316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 2988770 - 2988725
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaa 305  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||    
T  2988770 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaa 2988725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 138
Target Start/End: Complemental strand, 2995898 - 2995867
Alignment:
Q  107 atgtttcttctcttaaacatgtagatatttat 138  Q
    ||||||||||||||||||||||||||||||||    
T  2995898 atgtttcttctcttaaacatgtagatatttat 2995867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 3000751 - 3000794
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||    
T  3000751 ttgttttaaaatgaatgttactttacattttcaatacaacttta 3000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 36310411 - 36310360
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaactttat 311  Q
    |||||| |||||||||||| ||||||| |||||||||  |||||||||||||    
T  36310411 aaaaaaattgtttcaaaataaatgtcattttacatttccaatacaactttat 36310360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 44854314 - 44854357
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  44854314 ttgtttcaaaatgaacgtcactttacattttcaatacaatttta 44854357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 50420258 - 50420301
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||    
T  50420258 ttgtttaaaaataaatgtcattttacatttttaatacaacttta 50420301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 25061696 - 25061746
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||| ||||||||||||  ||||||||||||    
T  25061696 aaaaaaattgttttaaaatgaatgccactttacatttccaatacaacttta 25061746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 31291121 - 31291075
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||| | ||||||||| ||||||||||||| |||||||||||||    
T  31291121 aatttgtcttaaaatgaatatcactttacatttctaatacaacttta 31291075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 38457460 - 38457502
Alignment:
Q  268 tgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||    
T  38457460 tgtttcaaaatgaatatcattttacattttcaatacaacttta 38457502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 43688047 - 43687997
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||| |||||| |||||||||||||||||  ||||||||||||    
T  43688047 aaaaaaattgttccaaaataaatgtcactttacatttccaatacaacttta 43687997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 44676212 - 44676242
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcacttt 290  Q
    |||||||||||||||||||||||||||||||    
T  44676212 aaaaaatttgtttcaaaatgaatgtcacttt 44676242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 54261407 - 54261457
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||| ||| ||||||||||| ||| ||||||||    
T  54261407 aaaaaaattgtttcaaaatgaacgtcgctttacattttcaatgcaacttta 54261457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 36541493 - 36541533
Alignment:
Q  270 tttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  36541493 tttcaaaatgaatgtcgttttacattttcaatacaacttta 36541533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 24041162 - 24041112
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  24041162 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaacttta 24041112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 44583763 - 44583813
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  44583763 aaaaaatttgttttaaaatgaatgtcaccttacatttttaatacaacttta 44583813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 5317736 - 5317688
Alignment:
Q  262 aaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  5317736 aaaatttgtttcaaaatgaatgtcactttacaatttcaatacaacttta 5317688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 11650056 - 11650099
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  11650056 ttgtttcaaaatgaatgtcactttacattttcaatacaacttta 11650099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 1430666 - 1430624
Alignment:
Q  268 tgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  1430666 tgtttcaaaatgaatgtcactttacatttctaatacaacttta 1430624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 2458999 - 2459049
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  2458999 aaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaacttta 2459049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 6332157 - 6332207
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  6332157 aaaaaaattgttttaaaatgaatgtcactttacatttttaacacaacttta 6332207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 38132329 - 38132279
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  38132329 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 38132279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 40061058 - 40061008
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  40061058 aaaaaaattatttcaaaatgaatgtcactttacattttcaatacaacttta 40061008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 48260015 - 48259965
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  48260015 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaacttta 48259965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 50158468 - 50158418
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  50158468 aaaaaaattatttcaaaatgaatgtcactttacattttcaatacaacttta 50158418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 15647222 - 15647177
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaa 305  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||    
T  15647222 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaa 15647177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 26252109 - 26252157
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaactt 308  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  26252109 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactt 26252157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 84655 - 84605
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||||||||    
T  84655 aaaaaaattgttttaaaatgaatgtcactttacatttccaatacaacttta 84605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 11134614 - 11134572
Alignment:
Q  268 tgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||||| ||| ||||||||    
T  11134614 tgtttcaaaatgaatgtcactttacattttcaatgcaacttta 11134572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 12851732 - 12851782
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||  |||| |||||||    
T  12851732 aaaaaaattgtttcaaaatgaatgtcactttacatttccaatagaacttta 12851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 43755044 - 43755094
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||| ||||||||||||||| ||||||||||||    
T  43755044 aaaaaaattatttcaaaatgaacgtcactttacattttcaatacaacttta 43755094  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 22664931 - 22664976
Alignment:
Q  261 aaaaatttgtttcaaaatgaatgtcactttacatttttaatacaac 306  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||    
T  22664931 aaaaaattgtttcaaaatgaatgtcactttacatttccaatacaac 22664976  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 1428865 - 1428905
Alignment:
Q  268 tgtttcaaaatgaatgtcactttacatttttaatacaactt 308  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  1428865 tgttttaaaatgaatgtcactttacatttctaatacaactt 1428905  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 40719020 - 40719056
Alignment:
Q  274 aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40719020 aaaatgaatgtcaatttacatttttaatacaacttta 40719056  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 43738415 - 43738367
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaactt 308  Q
    |||||| |||||| |||||||||||||||| ||||||| ||||||||||    
T  43738415 aaaaaaattgttttaaaatgaatgtcacttcacattttcaatacaactt 43738367  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 45377301 - 45377261
Alignment:
Q  270 tttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  45377301 tttcaaaatgaatgtcactttacatttccaatacaacttta 45377261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 9552496 - 9552441
Alignment:
Q  255 aatataaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||| |||||| |||||| ||||||||||||| |||||||||  ||||||||||||    
T  9552496 aataaaaaaaaattgttttaaaatgaatgtcattttacatttccaatacaacttta 9552441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 28751570 - 28751519
Alignment:
Q  260 aaaaaatttgtttcaaaatgaa-tgtcactttacatttttaatacaacttta 310  Q
    |||||| || |||||||||||| |||||||||||||||| ||||||||||||    
T  28751570 aaaaaaattatttcaaaatgaaatgtcactttacattttcaatacaacttta 28751519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 43105738 - 43105691
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaactttat 311  Q
    ||||| ||| |||||||||||||| ||||||||| |||||||||||||    
T  43105738 aatttattttaaaatgaatgtcaccttacattttcaatacaactttat 43105691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 255075 - 255025
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||| ||||||||||  ||| ||||||||    
T  255075 aaaaaaattgtttcaaaatgaatgtcgctttacatttccaatgcaacttta 255025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 12002237 - 12002287
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| ||||||||||||| |||||||||  ||||||||||||    
T  12002237 aaaaaaattgttttaaaatgaatgtcattttacatttccaatacaacttta 12002287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 15698912 - 15698862
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||||||||| ||||  ||||||||||||    
T  15698912 aaaaaaattgttttaaaatgaatgtcactttatatttccaatacaacttta 15698862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 42650411 - 42650361
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||| |||| ||||| |||||| |||||||||| |||||||||||||    
T  42650411 aaaaaattagttttaaaataaatgtcgctttacatttctaatacaacttta 42650361  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 44024536 - 44024586
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||| | ||||||||||| ||| ||||||||    
T  44024536 aaaaaaattgtttcaaaatgaatgccgctttacattttcaatgcaacttta 44024586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 44582937 - 44582891
Alignment:
Q  264 aatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||| ||||||||| |||||||||||||||||  ||||||||||||    
T  44582937 aatttatttcaaaataaatgtcactttacatttccaatacaacttta 44582891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 50249301 - 50249331
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcacttt 290  Q
    |||||||||||||||||||||||||||||||    
T  50249301 aaaaaatttgtttcaaaatgaatgtcacttt 50249331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 50350019 - 50349967
Alignment:
Q  260 aaaaaatttgtttcaaaatgaat--gtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||  ||||||||||||||  ||||||||||||    
T  50350019 aaaaaaattgtttcaaaatgaatatgtcactttacatttccaatacaacttta 50349967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 2245791 - 2245827
Alignment:
Q  274 aaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  2245791 aaaatgaatgtcaccttacattttcaatacaacttta 2245827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 17919971 - 17919931
Alignment:
Q  270 tttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  17919971 tttcaaaatgaatatcactttacatttccaatacaacttta 17919931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 8149 - 8199
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  8149 aaaaaaattgtttcaaaatgaatgtcaatttacattttcaatacaacttta 8199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 70616 - 70566
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  70616 aaaaaaattgtttcaaaatgaatgtcactttacattttcaatgcaacttta 70566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 7852 - 7811
Alignment:
Q  267 ttgtttcaaaatgaatgtcactttacatttttaatacaacttt 309  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  7852 ttgttttaaaatgaatgtcactttaca-ttttaatacaacttt 7811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 3972 - 3942
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcacttt 290  Q
    |||||||||||||||||||||||||||||||    
T  3972 aaaaaatttgtttcaaaatgaatgtcacttt 3942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 321717 - 321767
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacatttttaatacaacttta 310  Q
    |||||| |||||| |||||||||||| ||||||||||  ||||||||||||    
T  321717 aaaaaaattgttttaaaatgaatgtcgctttacatttccaatacaacttta 321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 1632 - 1668
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacattt 296  Q
    |||||| || |||||||||||||||||||||||||||    
T  1632 aaaaaaattatttcaaaatgaatgtcactttacattt 1668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 9371 - 9407
Alignment:
Q  260 aaaaaatttgtttcaaaatgaatgtcactttacattt 296  Q
    |||||| || |||||||||||||||||||||||||||    
T  9371 aaaaaaattatttcaaaatgaatgtcactttacattt 9407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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