View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17216_low_38 (Length: 272)
Name: NF17216_low_38
Description: NF17216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17216_low_38 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 30 - 262
Target Start/End: Original strand, 14944960 - 14945193
Alignment:
| Q |
30 |
tatattagttgacacacccaaatacaattattttttctttattttagtacatatttaaaaatct--ccaaataatttagataagtaattatagttgctaa |
127 |
Q |
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| T |
14944960 |
tatattagttgacaaacccaaata-aattattttttctttattttagtacatatttaaaaatctatccaaataatttagataagtaattatagttgctaa |
14945058 |
T |
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| Q |
128 |
agattgcaaacttagattaaaagtataattaagtaacggatatacacagaagaaaattagctttgaggtatagtttttgtttgatggttaaatctttggt |
227 |
Q |
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| T |
14945059 |
agattgcaaacttagattaaaagtataattaagtaacggatatacacagaagaaaattagctttgaggtatagtttttgtttgatggttaaatctttggt |
14945158 |
T |
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| Q |
228 |
ccaatggctttgttgttgttagcttctgtcctatg |
262 |
Q |
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| T |
14945159 |
ccaatggctttgttgttgttagcttctgtcctatg |
14945193 |
T |
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