View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17217_low_22 (Length: 217)
Name: NF17217_low_22
Description: NF17217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17217_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 7389193 - 7389377
Alignment:
| Q |
15 |
attatactccctttatctcaaggagatatttgttgatttcacatatattaaaaattattaaagtattcatatataaaacatggtatatgtgaatttgatg |
114 |
Q |
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| T |
7389193 |
attatactccctttatctcaaggagatatttgttgatttcacatatattaaaaattattaaagtattcatatataaaacatggtatatgtgaatttgata |
7389292 |
T |
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| Q |
115 |
caaaataaatgtttgtgaaaattaatatgaatttggtgagacaataggaagtcacaaaaactttgtcatttctatatatggttgt |
199 |
Q |
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| T |
7389293 |
caaaataaatgtttgtgaaaattaatatgaatttggtgagacaataggaagtcacaaaaactttgtcatttctatatatggttgt |
7389377 |
T |
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