View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17218_high_17 (Length: 308)
Name: NF17218_high_17
Description: NF17218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17218_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 12 - 298
Target Start/End: Complemental strand, 32112824 - 32112538
Alignment:
| Q |
12 |
aaataacttaacaagccctaagcttctacatctatttaggatatctaaattcatttacgatccttgtgaaagtttcctcttctcatcgataatgctacat |
111 |
Q |
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| T |
32112824 |
aaataacttaacaagccctaagcttctacatctatttaggatatctaaattcatttacgatccttgtgaaagtttcctcttctcatcgataatgctacat |
32112725 |
T |
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| Q |
112 |
atgttttgtttgttatcctgatgatgagtttgtgtggacatgtttctaagtagcttactttgatatttgggtgccgaattagttagttgttattgtcaaa |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32112724 |
atgttttgtttgttatcctgatgatgagtttgtgtggacatgtttctaagtagcttactttgatatttgggtgccgaattagttagttgttattgtcaaa |
32112625 |
T |
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| Q |
212 |
tctcacttactctcggcaatataaaagtgaactgagtatttggtgctaggaaggtttatcaaggaatatagtacttttggtcctatg |
298 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32112624 |
tctcacttactctcagcaatataaaagtgaactgagtatttggtgctaggaaggtttatcaaggaatatagtacttttggtcctatg |
32112538 |
T |
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