View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17218_low_21 (Length: 293)
Name: NF17218_low_21
Description: NF17218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17218_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 6 - 274
Target Start/End: Original strand, 42924881 - 42925149
Alignment:
| Q |
6 |
agaaagattctttgtatcatattttagttttgattacatccatccatatagacaagaaaacaacattgttaattacattttgtcaaatacaatacaatat |
105 |
Q |
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| T |
42924881 |
agaaagattctttgtatcatattttagttttgattacatccatccatatagacaagaaaacaacattgttaattacattttgtcaaatacaatacaatat |
42924980 |
T |
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| Q |
106 |
taacaacatggattataatagtatcaaaaaacaaataaagagttccattaaaataataattactttttcaagattataatacaattaaaacatacaatat |
205 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || |
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| T |
42924981 |
taacaacatggattataatagtatcaaaaaacaaatcaagagttccattaaaataagaattactttttcaagattataatacaattaaaacataaaacat |
42925080 |
T |
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| Q |
206 |
ggcttaaaccccaagagttagcagaaagagtagaactgaaacaaatccattactttaataaatatatat |
274 |
Q |
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| T |
42925081 |
ggcttaaaccccaagagttagcagaaagagtagaattgaaacaaatccattactttaataaatatatat |
42925149 |
T |
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