View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17218_low_25 (Length: 276)
Name: NF17218_low_25
Description: NF17218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17218_low_25 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 3402402 - 3402438
Alignment:
| Q |
196 |
aacaatcttactatatgatgaggatcaatatggagtt |
232 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3402402 |
aacaattttactatatgatgaggatcaatatggagtt |
3402438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University