View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17219_low_8 (Length: 329)
Name: NF17219_low_8
Description: NF17219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17219_low_8 |
 | |
|
| [»] scaffold0586 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0586 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: scaffold0586
Description:
Target: scaffold0586; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 9 - 313
Target Start/End: Complemental strand, 9793 - 9489
Alignment:
| Q |
9 |
agcagagaaatgacaaattcatttagtaacaaagcaataagcaacatcagaagacnnnnnnncagagaaatgatataaatcaccaaatctatattgagta |
108 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9793 |
agcagagaaatgacaaattcattaagtaacaaagcaataagcaacatcagaagacaaaaaaacagagaaatgatataaatcaccaaatctatgttgagta |
9694 |
T |
|
| Q |
109 |
atggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagccgttgatgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
9693 |
atggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacaacaagcagttgatgaacactacaaagatcatgggt |
9594 |
T |
|
| Q |
209 |
gaaaaaattagcgggaatagcagagaaaaatttagcgaaaatggcaagggcaaatatggtattttattcaagatcatgggtttccattttctgggaataa |
308 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9593 |
gaaaaaattagcgggaataacagagaaaaatttagcgggaatggcaagggaaaatatggtattttattcaagatcatgggtttccatttcctgggaataa |
9494 |
T |
|
| Q |
309 |
aactt |
313 |
Q |
| |
|
||||| |
|
|
| T |
9493 |
aactt |
9489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 313
Target Start/End: Complemental strand, 19701365 - 19701056
Alignment:
| Q |
9 |
agcagagaaatgacaaattcatttagtaacaaagcaataagcaacatcagaagacnnnnnnn-----cagagaaatgatataaatcaccaaatctatatt |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || |
|
|
| T |
19701365 |
agcagagaaatgacaaattcatttagtaacaaagcaataagcaacatcagaagacaaaaaaaaaaatcagagaaatgatataaatcaacaaatctatgtt |
19701266 |
T |
|
| Q |
104 |
gagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagccgttgatgaacactacaaagatca |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
19701265 |
gagtaatggaagaattaaaatgaaattagatggtaccttgaagagaaaagtgaaatccaaaactcaaatagcaagcagttgatgaacactacaaagatca |
19701166 |
T |
|
| Q |
204 |
tgggtgaaaaaattagcgggaatagcagagaaaaatttagcgaaaatggcaagggcaaatatggtattttattcaagatcatgggtttccattttctggg |
303 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19701165 |
tgggtgaaaaaattagtgggaatagcagagaaaaatttagtgagaatggcaagggaaaatatggtattttattcaagatcatgggtttccatttcctggg |
19701066 |
T |
|
| Q |
304 |
aataaaactt |
313 |
Q |
| |
|
|||||||||| |
|
|
| T |
19701065 |
aataaaactt |
19701056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 21481564 - 21481428
Alignment:
| Q |
71 |
cagagaaatgatataaatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaa |
170 |
Q |
| |
|
||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||| ||| |
|
|
| T |
21481564 |
cagagaattgatatcaatcaccaaatctatgttgagtaatggaagaattatgatgaaattagatgttaccttgaatagaagagtgaaatcaaaaacccaa |
21481465 |
T |
|
| Q |
171 |
acagcaagccgttgatgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||||| ||||||| |||| ||||||||||||||| |
|
|
| T |
21481464 |
ttggcaagtagttgatgcacac-acaaagatcatgggt |
21481428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 163; Significance: 5e-87; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 32717746 - 32717945
Alignment:
| Q |
9 |
agcagagaaatgacaaattcatttagtaacaaagcaataagcaacatcagaagacnnnnnnncagagaaatgatataaatcaccaaatctatattgagta |
108 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
32717746 |
agcagagaaatgacaaattcatttagcaacaaagcaataagcaacatcagaagacaaaaaaacagagaaatgatataaatcaccaaatctatgttgagta |
32717845 |
T |
|
| Q |
109 |
atggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagccgttgatgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
32717846 |
atggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagcagttgatgaacactacaaagataatgggt |
32717945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 10637848 - 10637649
Alignment:
| Q |
9 |
agcagagaaatgacaaattcatttagtaacaaagcaataagcaacatcagaagacnnnnnnncagagaaatgatataaatcaccaaatctatattgagta |
108 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10637848 |
agcagggaaatgacaaattcatttagtaacaaagcaataagcaacatcagaagacaaaaaaacagagaaatgatataaatcaccaaatctatgttgagta |
10637749 |
T |
|
| Q |
109 |
atggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagccgttgatgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
10637748 |
atggaagaattaaaatgaaattagatgataccttgaagagaagagtgaaatccaaaactcaaacagcaagcagttgatgaacactacaaagataatgggt |
10637649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 32717959 - 32718075
Alignment:
| Q |
197 |
aagatcatgggtgaaaaaattagcgggaatagcagagaaaaatttagcgaaaatggcaagggcaaatatggtattttattcaagatcatgggtttccatt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32717959 |
aagatcatgggtgaaaaaattagcgggaatagcagagaaaaatttagcgggaatggcaagggcaaatatggtattttattcaagatcatgggtttccatt |
32718058 |
T |
|
| Q |
297 |
ttctgggaataaaactt |
313 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
32718059 |
tcctgggaataaaactt |
32718075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 10637635 - 10637519
Alignment:
| Q |
197 |
aagatcatgggtgaaaaaattagcgggaatagcagagaaaaatttagcgaaaatggcaagggcaaatatggtattttattcaagatcatgggtttccatt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10637635 |
aagatcatgggtgaaaaaattagcgggaatagcagagaaaaatttagcgggaatggcaagggcaaatatggtattttattcaagttcatgggtttccatt |
10637536 |
T |
|
| Q |
297 |
ttctgggaataaaactt |
313 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
10637535 |
tcctgggaataaaactt |
10637519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 208
Target Start/End: Complemental strand, 22894005 - 22893804
Alignment:
| Q |
11 |
cagagaaatgacaaattcatttagtaacaaagcaataagcaacatcagaagacnnnnnnn----cagagaaatgatataaatcaccaaatctatattgag |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22894005 |
cagagaaatgacaaattcatttagtaacaaagcaataagcaacatcagaagacaaaaaaaaaaacagagaaatgatataaatcaccaaatctatgttgag |
22893906 |
T |
|
| Q |
107 |
taatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagccgttgatgaacactacaaagatcatgg |
206 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22893905 |
taatggaagaattaaaatgaaattagatgttaccttgaagagaagagtgaaatccaaaactcaaacagcaagcagttgatgaacactacaaagatcatgg |
22893806 |
T |
|
| Q |
207 |
gt |
208 |
Q |
| |
|
|| |
|
|
| T |
22893805 |
gt |
22893804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 22893790 - 22893674
Alignment:
| Q |
197 |
aagatcatgggtgaaaaaattagcgggaatagcagagaaaaatttagcgaaaatggcaagggcaaatatggtattttattcaagatcatgggtttccatt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22893790 |
aagatcatgggtgaaaaaattagcgggaatagcagagaaaaatttagcgggaatggcaagggaaaatatggtattttattcaagatcatgggtttccatt |
22893691 |
T |
|
| Q |
297 |
ttctgggaataaaactt |
313 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
22893690 |
tcctgggaataaaactt |
22893674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 44306261 - 44306131
Alignment:
| Q |
77 |
aatgatataaatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagca |
176 |
Q |
| |
|
|||||||| ||| ||||||||||| |||||||||||||||||| ||| ||| || ||||||||||||||||||||||||||||||| ||| ||| |||| |
|
|
| T |
44306261 |
aatgatatcaatgaccaaatctatgttgagtaatggaagaattgaaaagaattt-gatggtaccttgaagagaagagtgaaatccagaaccaaaatagca |
44306163 |
T |
|
| Q |
177 |
agccgttgatgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||| |||||||||||| |||||||| |||||| |
|
|
| T |
44306162 |
agcagttgatgaacaccacaaagatgatgggt |
44306131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 13331532 - 13331653
Alignment:
| Q |
86 |
aatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagccgttga |
185 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |
|
|
| T |
13331532 |
aatcaccaaatctatgttgagtaatggaagaattgagataaaattagatggtaccttgaagagaagagtgaaatcaaaaactcaatcagcaagcagttga |
13331631 |
T |
|
| Q |
186 |
tgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
13331632 |
tgaacac-acaaagatcatgggt |
13331653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 13342447 - 13342568
Alignment:
| Q |
86 |
aatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagccgttga |
185 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |
|
|
| T |
13342447 |
aatcaccaaatctatgttgagtaatggaagaattgagataaaattagatggtaccttgaagagaagagtgaaatcaaaaactcaatcagcaagcagttga |
13342546 |
T |
|
| Q |
186 |
tgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
13342547 |
tgaacac-acaaagatcatgggt |
13342568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 33430221 - 33430353
Alignment:
| Q |
77 |
aatgatataaatcaccaaatctatattgagtaatggaagaattaaaatgaaa-ttagatggtaccttgaagagaagagtgaaatccaaaactcaaacagc |
175 |
Q |
| |
|
|||||| | ||||| |||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||| |||||||| ||||| |||| ||| |
|
|
| T |
33430221 |
aatgatgtcaatcatcaaatctacgttgagtaatggaacgattaaaaaaaaaattagatggtaccttgaagagaatagtgaaattcaaaatccaaatagc |
33430320 |
T |
|
| Q |
176 |
aagccgttgatgaacactacaaagatcatgggt |
208 |
Q |
| |
|
|| | ||||||||||| |||||||| ||||| |
|
|
| T |
33430321 |
aaacacttgatgaacacctcaaagatcgtgggt |
33430353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 13331717 - 13331781
Alignment:
| Q |
248 |
aatggcaagggcaaatatggtattttattcaagatcatgggtttccattttctgggaataaaactt |
313 |
Q |
| |
|
||||||||||||||| ||||| ||||||| |||||||||||||| || || |||||||| |||||| |
|
|
| T |
13331717 |
aatggcaagggcaaaaatggttttttattgaagatcatgggttt-caattcctgggaatgaaactt |
13331781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 13342632 - 13342696
Alignment:
| Q |
248 |
aatggcaagggcaaatatggtattttattcaagatcatgggtttccattttctgggaataaaactt |
313 |
Q |
| |
|
|||| |||||||||| ||||| ||||||| |||||||||||||| || || |||||||| |||||| |
|
|
| T |
13342632 |
aatgacaagggcaaaaatggttttttattgaagatcatgggttt-caattcctgggaatgaaactt |
13342696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 5672003 - 5672124
Alignment:
| Q |
86 |
aatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagcaagccgttga |
185 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |
|
|
| T |
5672003 |
aatcaccaaatctatgttgagtaatggaagaattgagataaaattagatggtaccttgaagagaagagtgaaatcaaaaactcaatcagcaagcagttga |
5672102 |
T |
|
| Q |
186 |
tgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
5672103 |
tgaacac-acaaagatcatgggt |
5672124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 5672188 - 5672252
Alignment:
| Q |
248 |
aatggcaagggcaaatatggtattttattcaagatcatgggtttccattttctgggaataaaactt |
313 |
Q |
| |
|
|||| |||||||||| ||||| ||||||| |||||||||||||| || || |||||||| |||||| |
|
|
| T |
5672188 |
aatgacaagggcaaaaatggttttttattgaagatcatgggttt-caattcctgggaatgaaactt |
5672252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 6050045 - 6049914
Alignment:
| Q |
77 |
aatgatataaatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagca |
176 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||| ||| |||| |
|
|
| T |
6050045 |
aatgatatcaatcaccaaatctatgttgagtaatggaagaattgaaaagaaatttgatggtaccttgaagagaagagtgaaatccagaaccaaaatagca |
6049946 |
T |
|
| Q |
177 |
agccgttgatgaacactacaaagatcatgggt |
208 |
Q |
| |
|
||| |||||||||||| |||||||| |||||| |
|
|
| T |
6049945 |
agcagttgatgaacaccacaaagatgatgggt |
6049914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 26661646 - 26661510
Alignment:
| Q |
71 |
cagagaaatgatataaatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaa |
170 |
Q |
| |
|
||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||| ||| |
|
|
| T |
26661646 |
cagagaattgatatcaatcaccaaatctatgttgagtaatggaagaattatgatgaaattagatgataccttgaacagaagagtgaaatcaaaaacccaa |
26661547 |
T |
|
| Q |
171 |
acagcaagccgttgatgaacactacaaagatcatgggt |
208 |
Q |
| |
|
|||||| ||||||| |||| ||||||||||||||| |
|
|
| T |
26661546 |
ttggcaagcagttgatgcacac-acaaagatcatgggt |
26661510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 13893695 - 13893810
Alignment:
| Q |
77 |
aatgatataaatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaacagca |
176 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||| ||| | || |
|
|
| T |
13893695 |
aatgatatcaatcaccaaatctatgttgagtaatggaagaattgaaaagaaatttgatggtaccttgaagagaagagtgaaatccagaaccaaaataaca |
13893794 |
T |
|
| Q |
177 |
agccgttgatgaacac |
192 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
13893795 |
agcagttgatgaacac |
13893810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 15761974 - 15762091
Alignment:
| Q |
86 |
aatcaccaaatctatattgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaaa-cagcaagccgttg |
184 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||| | ||||||||||||||||| ||||| |||| |||||||| |||||| |||| ||||| |||| |
|
|
| T |
15761974 |
aatcaccaaatctatgttgagtaatagaagaattgagatgaaattagatggtactttgaaaagaatagtgaaat-caaaacccaaattagcaaatagttg |
15762072 |
T |
|
| Q |
185 |
atgaacactacaaagatcat |
204 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
15762073 |
atgaaca-tacaaagatcat |
15762091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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