View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1721_high_24 (Length: 280)

Name: NF1721_high_24
Description: NF1721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1721_high_24
NF1721_high_24
[»] chr4 (85 HSPs)
chr4 (1-266)||(24570219-24570481)
chr4 (176-262)||(16556464-16556550)
chr4 (176-262)||(46283135-46283221)
chr4 (146-262)||(51974760-51974873)
chr4 (176-262)||(40406956-40407043)
chr4 (176-258)||(45355714-45355795)
chr4 (176-258)||(45369455-45369536)
chr4 (177-262)||(43362165-43362250)
chr4 (177-262)||(45847923-45848008)
chr4 (176-262)||(22096387-22096473)
chr4 (146-256)||(11491188-11491295)
chr4 (176-262)||(36993054-36993140)
chr4 (176-262)||(42154579-42154665)
chr4 (176-261)||(38690680-38690765)
chr4 (177-262)||(48404134-48404219)
chr4 (147-262)||(50815720-50815832)
chr4 (180-260)||(2832071-2832151)
chr4 (179-262)||(23448986-23449068)
chr4 (179-261)||(29430511-29430593)
chr4 (165-258)||(35909013-35909107)
chr4 (167-262)||(25234845-25234940)
chr4 (183-262)||(41271981-41272060)
chr4 (176-262)||(8716567-8716650)
chr4 (191-262)||(27862842-27862913)
chr4 (176-262)||(43084460-43084546)
chr4 (176-249)||(37889602-37889675)
chr4 (179-236)||(44251326-44251383)
chr4 (146-236)||(37574311-37574398)
chr4 (176-236)||(56555587-56555647)
chr4 (211-262)||(13210195-13210246)
chr4 (176-254)||(26885396-26885474)
chr4 (195-236)||(33076569-33076610)
chr4 (176-236)||(21200569-21200628)
chr4 (177-236)||(8690253-8690312)
chr4 (137-262)||(22341822-22341944)
chr4 (175-233)||(2824634-2824692)
chr4 (195-233)||(11872915-11872953)
chr4 (208-262)||(24253136-24253190)
chr4 (180-236)||(6637721-6637778)
chr4 (180-236)||(22158286-22158343)
chr4 (180-236)||(24234073-24234130)
chr4 (180-236)||(37032178-37032235)
chr4 (180-236)||(47017945-47018002)
chr4 (177-249)||(11128746-11128818)
chr4 (177-236)||(9693001-9693060)
chr4 (177-236)||(14149832-14149891)
chr4 (177-236)||(28520728-28520787)
chr4 (177-236)||(36954176-36954235)
chr4 (195-262)||(39387491-39387558)
chr4 (197-236)||(42411471-42411510)
chr4 (177-236)||(48968207-48968266)
chr4 (177-236)||(52031246-52031305)
chr4 (215-262)||(52366220-52366267)
chr4 (191-225)||(6202653-6202687)
chr4 (188-262)||(8716398-8716472)
chr4 (179-236)||(9924895-9924953)
chr4 (180-233)||(12856226-12856280)
chr4 (167-201)||(25104401-25104435)
chr4 (180-233)||(26203786-26203840)
chr4 (194-236)||(27091458-27091500)
chr4 (146-241)||(52330880-52330970)
chr4 (191-236)||(1589168-1589213)
chr4 (180-236)||(3465622-3465679)
chr4 (191-236)||(9084798-9084843)
chr4 (191-236)||(10098164-10098209)
chr4 (180-236)||(12820404-12820461)
chr4 (195-236)||(20610778-20610819)
chr4 (191-236)||(21476092-21476137)
chr4 (191-236)||(27921935-27921980)
chr4 (176-261)||(32037581-32037666)
chr4 (180-236)||(32885727-32885784)
chr4 (180-236)||(36008314-36008371)
chr4 (195-236)||(36257733-36257774)
chr4 (177-234)||(40150514-40150571)
chr4 (195-236)||(49319432-49319473)
chr4 (177-258)||(51707137-51707217)
chr4 (180-236)||(53697979-53698036)
chr4 (208-236)||(13578465-13578493)
chr4 (196-236)||(18497431-18497471)
chr4 (208-236)||(23176721-23176749)
chr4 (181-236)||(35747482-35747538)
chr4 (191-227)||(37274628-37274664)
chr4 (208-236)||(38848120-38848148)
chr4 (180-231)||(45141232-45141284)
chr4 (208-236)||(55021596-55021624)
[»] chr7 (73 HSPs)
chr7 (146-263)||(4956061-4956175)
chr7 (141-262)||(48433674-48433792)
chr7 (176-262)||(40273834-40273920)
chr7 (176-262)||(31793481-31793567)
chr7 (177-262)||(33248799-33248884)
chr7 (176-262)||(38378232-38378318)
chr7 (178-262)||(42554647-42554731)
chr7 (176-262)||(12166095-12166181)
chr7 (176-262)||(23824588-23824673)
chr7 (176-262)||(43440702-43440788)
chr7 (146-262)||(27454024-27454138)
chr7 (179-262)||(36528218-36528301)
chr7 (176-262)||(3961404-3961490)
chr7 (176-262)||(24029998-24030084)
chr7 (176-256)||(3889796-3889877)
chr7 (179-262)||(46266681-46266764)
chr7 (176-262)||(48619810-48619895)
chr7 (167-262)||(22156111-22156205)
chr7 (167-262)||(22212026-22212120)
chr7 (175-257)||(46195936-46196018)
chr7 (146-260)||(28914846-28914958)
chr7 (166-262)||(37918693-37918789)
chr7 (175-259)||(44662458-44662542)
chr7 (167-258)||(24315341-24315431)
chr7 (199-262)||(42338266-42338329)
chr7 (176-262)||(14707306-14707391)
chr7 (176-262)||(15025169-15025255)
chr7 (176-242)||(42841777-42841843)
chr7 (176-236)||(5228109-5228169)
chr7 (176-236)||(10091453-10091513)
chr7 (176-244)||(18128901-18128969)
chr7 (176-236)||(20529935-20529995)
chr7 (203-262)||(1575707-1575766)
chr7 (180-234)||(33202553-33202608)
chr7 (177-236)||(37665783-37665842)
chr7 (176-262)||(34322020-34322106)
chr7 (180-262)||(44986607-44986689)
chr7 (176-262)||(46243304-46243390)
chr7 (187-261)||(48525591-48525665)
chr7 (195-236)||(11808077-11808118)
chr7 (180-236)||(21285352-21285409)
chr7 (176-261)||(25775609-25775694)
chr7 (180-236)||(29658271-29658328)
chr7 (180-236)||(47552252-47552309)
chr7 (176-236)||(40011751-40011811)
chr7 (146-227)||(6548681-6548759)
chr7 (175-262)||(13295370-13295457)
chr7 (177-236)||(24396984-24397043)
chr7 (175-262)||(41468849-41468935)
chr7 (212-262)||(3902306-3902355)
chr7 (177-223)||(23602326-23602372)
chr7 (176-230)||(36977237-36977291)
chr7 (194-236)||(47355848-47355890)
chr7 (180-236)||(2261483-2261540)
chr7 (195-236)||(5180706-5180747)
chr7 (216-261)||(8249719-8249764)
chr7 (191-236)||(10020480-10020525)
chr7 (180-236)||(14102500-14102557)
chr7 (180-236)||(14412517-14412574)
chr7 (176-233)||(26606105-26606162)
chr7 (180-236)||(38792251-38792308)
chr7 (195-236)||(41417290-41417331)
chr7 (195-236)||(43635627-43635668)
chr7 (191-235)||(3955056-3955100)
chr7 (208-236)||(9712198-9712226)
chr7 (176-236)||(10624794-10624853)
chr7 (176-236)||(20013620-20013680)
chr7 (195-227)||(28693853-28693885)
chr7 (230-262)||(28712381-28712413)
chr7 (200-236)||(30806157-30806193)
chr7 (210-238)||(36877014-36877042)
chr7 (181-236)||(38025380-38025436)
chr7 (208-236)||(45284819-45284847)
[»] chr6 (56 HSPs)
chr6 (146-262)||(6228229-6228342)
chr6 (146-262)||(18903336-18903449)
chr6 (167-262)||(4854293-4854388)
chr6 (141-258)||(20415526-20415640)
chr6 (146-262)||(19748112-19748224)
chr6 (176-262)||(24794891-24794977)
chr6 (176-262)||(29321972-29322058)
chr6 (176-263)||(7954918-7955005)
chr6 (176-262)||(17216971-17217057)
chr6 (146-262)||(30422077-30422190)
chr6 (176-262)||(31637357-31637443)
chr6 (179-262)||(11552884-11552967)
chr6 (176-242)||(3974474-3974540)
chr6 (176-258)||(5948882-5948970)
chr6 (176-262)||(1128412-1128501)
chr6 (211-262)||(15717044-15717095)
chr6 (176-262)||(9357169-9357255)
chr6 (180-236)||(6025386-6025442)
chr6 (180-236)||(22983619-22983676)
chr6 (180-236)||(23804732-23804789)
chr6 (180-235)||(3448392-3448448)
chr6 (178-262)||(18618538-18618621)
chr6 (176-227)||(5641686-5641737)
chr6 (176-226)||(11611418-11611468)
chr6 (176-262)||(25091095-25091181)
chr6 (178-236)||(32344678-32344736)
chr6 (180-236)||(12101925-12101982)
chr6 (177-242)||(20568252-20568319)
chr6 (196-236)||(30833056-30833096)
chr6 (191-242)||(9234112-9234163)
chr6 (179-262)||(28536167-28536250)
chr6 (194-236)||(2488872-2488914)
chr6 (177-223)||(3338304-3338350)
chr6 (196-242)||(6658559-6658605)
chr6 (179-236)||(7563574-7563632)
chr6 (208-242)||(7897118-7897152)
chr6 (176-262)||(35065486-35065571)
chr6 (195-236)||(3294806-3294847)
chr6 (176-233)||(5757867-5757924)
chr6 (176-233)||(7164736-7164793)
chr6 (180-236)||(9438341-9438398)
chr6 (180-236)||(12089136-12089193)
chr6 (180-236)||(18244012-18244068)
chr6 (200-233)||(22997381-22997414)
chr6 (200-233)||(23790987-23791020)
chr6 (180-236)||(25020527-25020584)
chr6 (180-236)||(32057073-32057130)
chr6 (180-236)||(35190802-35190859)
chr6 (208-236)||(10373634-10373662)
chr6 (208-236)||(10483536-10483564)
chr6 (208-236)||(10517241-10517269)
chr6 (208-236)||(16913900-16913928)
chr6 (208-236)||(18904307-18904335)
chr6 (194-262)||(21874235-21874303)
chr6 (177-233)||(29284160-29284216)
chr6 (208-236)||(31935141-31935169)
[»] chr3 (89 HSPs)
chr3 (146-262)||(47864649-47864762)
chr3 (176-262)||(50381727-50381813)
chr3 (176-259)||(31435497-31435580)
chr3 (146-262)||(33528174-33528287)
chr3 (176-262)||(39739287-39739373)
chr3 (176-262)||(11483626-11483712)
chr3 (176-262)||(27471517-27471603)
chr3 (176-262)||(29226339-29226425)
chr3 (146-262)||(46798595-46798708)
chr3 (146-262)||(9320928-9321041)
chr3 (146-262)||(22602172-22602285)
chr3 (176-242)||(29645823-29645889)
chr3 (179-262)||(2259170-2259252)
chr3 (146-262)||(46247273-46247388)
chr3 (176-262)||(25165453-25165543)
chr3 (139-262)||(55426127-55426243)
chr3 (176-262)||(27817064-27817149)
chr3 (179-260)||(32421363-32421444)
chr3 (176-252)||(44062038-44062113)
chr3 (176-256)||(50688859-50688939)
chr3 (211-262)||(36590403-36590454)
chr3 (178-261)||(45431641-45431724)
chr3 (176-262)||(985915-986001)
chr3 (177-262)||(1325328-1325414)
chr3 (146-262)||(16141322-16141435)
chr3 (176-262)||(38668141-38668227)
chr3 (177-261)||(166802-166886)
chr3 (176-260)||(1102692-1102776)
chr3 (188-236)||(4478376-4478424)
chr3 (176-236)||(50271768-50271828)
chr3 (176-262)||(30162670-30162760)
chr3 (167-261)||(50676854-50676948)
chr3 (176-261)||(27394522-27394606)
chr3 (176-261)||(38414897-38414982)
chr3 (175-236)||(48717452-48717513)
chr3 (176-225)||(49429510-49429559)
chr3 (165-261)||(9489491-9489587)
chr3 (177-236)||(24559428-24559487)
chr3 (180-262)||(7517953-7518035)
chr3 (212-262)||(8258165-8258215)
chr3 (180-241)||(54983704-54983766)
chr3 (180-236)||(24537866-24537923)
chr3 (180-261)||(28054729-28054810)
chr3 (180-261)||(28065154-28065235)
chr3 (177-262)||(31419596-31419681)
chr3 (180-236)||(32508793-32508850)
chr3 (174-262)||(34225208-34225298)
chr3 (195-236)||(36331741-36331782)
chr3 (180-236)||(38682257-38682314)
chr3 (212-261)||(38869223-38869272)
chr3 (180-236)||(42271012-42271069)
chr3 (180-236)||(43774224-43774281)
chr3 (180-236)||(46328923-46328980)
chr3 (195-236)||(49146123-49146164)
chr3 (195-236)||(52030160-52030201)
chr3 (176-236)||(40412306-40412366)
chr3 (177-236)||(9625022-9625081)
chr3 (177-236)||(27183678-27183737)
chr3 (215-262)||(33780316-33780363)
chr3 (180-230)||(36727462-36727513)
chr3 (195-234)||(36842203-36842242)
chr3 (208-255)||(45871040-45871087)
chr3 (180-233)||(13616073-13616127)
chr3 (208-242)||(25883988-25884022)
chr3 (176-262)||(33830364-33830450)
chr3 (210-244)||(54240636-54240670)
chr3 (180-236)||(2732702-2732759)
chr3 (206-255)||(3748600-3748649)
chr3 (177-234)||(3784111-3784168)
chr3 (176-262)||(7239819-7239901)
chr3 (195-236)||(16277966-16278007)
chr3 (180-236)||(23820668-23820725)
chr3 (195-236)||(24160543-24160584)
chr3 (195-236)||(27066649-27066690)
chr3 (180-236)||(33206796-33206853)
chr3 (191-236)||(34407101-34407146)
chr3 (195-236)||(35483308-35483349)
chr3 (180-236)||(36256678-36256735)
chr3 (176-257)||(37756409-37756490)
chr3 (180-236)||(43566795-43566852)
chr3 (180-236)||(48347271-48347328)
chr3 (203-236)||(48722286-48722319)
chr3 (177-233)||(10959175-10959231)
chr3 (208-236)||(15085684-15085712)
chr3 (208-236)||(29098734-29098762)
chr3 (208-236)||(40963711-40963739)
chr3 (200-236)||(42785936-42785972)
chr3 (200-236)||(46844963-46844999)
chr3 (200-236)||(49983700-49983736)
[»] scaffold0001 (1 HSPs)
scaffold0001 (139-262)||(419725-419845)
[»] chr5 (57 HSPs)
chr5 (176-262)||(31250160-31250246)
chr5 (176-262)||(38503253-38503339)
chr5 (176-262)||(43227879-43227965)
chr5 (179-262)||(17077374-17077457)
chr5 (166-262)||(15106873-15106969)
chr5 (176-259)||(930934-931017)
chr5 (176-262)||(5039694-5039779)
chr5 (146-254)||(33545356-33545460)
chr5 (176-261)||(34729486-34729570)
chr5 (176-262)||(15470617-15470703)
chr5 (176-242)||(41836073-41836139)
chr5 (140-261)||(20191456-20191573)
chr5 (176-262)||(1572123-1572209)
chr5 (176-258)||(42208934-42209015)
chr5 (178-262)||(87804-87888)
chr5 (177-257)||(3294101-3294181)
chr5 (176-252)||(4395847-4395923)
chr5 (211-262)||(12375443-12375494)
chr5 (177-233)||(18175249-18175307)
chr5 (180-262)||(1984189-1984271)
chr5 (177-262)||(9628130-9628215)
chr5 (177-236)||(4674812-4674871)
chr5 (177-236)||(36045131-36045190)
chr5 (215-262)||(42643838-42643885)
chr5 (179-236)||(962327-962387)
chr5 (146-242)||(3867723-3867815)
chr5 (191-233)||(4985801-4985843)
chr5 (191-237)||(29561686-29561732)
chr5 (180-236)||(8015874-8015931)
chr5 (208-253)||(29530796-29530841)
chr5 (191-236)||(42801452-42801497)
chr5 (180-236)||(18872560-18872615)
chr5 (180-224)||(35168632-35168676)
chr5 (177-236)||(1463910-1463969)
chr5 (177-224)||(38435970-38436017)
chr5 (176-243)||(42902061-42902127)
chr5 (176-262)||(5263182-5263268)
chr5 (176-222)||(15680897-15680943)
chr5 (180-236)||(1244726-1244783)
chr5 (180-236)||(2029127-2029184)
chr5 (191-236)||(6614049-6614094)
chr5 (195-236)||(10943755-10943796)
chr5 (180-236)||(19059003-19059060)
chr5 (180-236)||(23925582-23925639)
chr5 (195-236)||(31556857-31556898)
chr5 (180-236)||(32158413-32158470)
chr5 (180-236)||(36226134-36226191)
chr5 (195-236)||(37303973-37304014)
chr5 (180-236)||(38618680-38618737)
chr5 (208-236)||(3740996-3741024)
chr5 (200-236)||(6558843-6558879)
chr5 (200-236)||(8571835-8571871)
chr5 (195-255)||(15715805-15715865)
chr5 (208-236)||(18050221-18050249)
chr5 (208-236)||(26902663-26902691)
chr5 (180-231)||(29331287-29331339)
chr5 (217-261)||(31991798-31991842)
[»] chr1 (75 HSPs)
chr1 (176-262)||(14262717-14262803)
chr1 (176-262)||(24134620-24134706)
chr1 (167-262)||(8893873-8893968)
chr1 (176-262)||(50011520-50011606)
chr1 (147-262)||(49619985-49620097)
chr1 (176-262)||(3347699-3347785)
chr1 (146-262)||(43109207-43109320)
chr1 (177-262)||(34702310-34702395)
chr1 (176-262)||(10123049-10123134)
chr1 (177-262)||(7438634-7438719)
chr1 (176-257)||(12148569-12148650)
chr1 (176-262)||(19424059-19424145)
chr1 (176-262)||(25031493-25031579)
chr1 (176-262)||(50065023-50065109)
chr1 (147-262)||(48497183-48497295)
chr1 (176-262)||(47651885-47651970)
chr1 (176-262)||(52164367-52164453)
chr1 (142-259)||(25800298-25800412)
chr1 (141-262)||(40061456-40061573)
chr1 (180-262)||(4684177-4684259)
chr1 (176-262)||(15417813-15417899)
chr1 (146-262)||(30735841-30735954)
chr1 (176-262)||(42937225-42937311)
chr1 (177-253)||(10790490-10790566)
chr1 (176-262)||(27054703-27054795)
chr1 (176-239)||(16985931-16985994)
chr1 (176-262)||(50302847-50302933)
chr1 (176-262)||(2017681-2017766)
chr1 (177-262)||(12973275-12973360)
chr1 (176-252)||(29936677-29936753)
chr1 (179-262)||(4126912-4126995)
chr1 (177-236)||(29491509-29491567)
chr1 (177-260)||(47428892-47428975)
chr1 (208-262)||(22386264-22386318)
chr1 (167-261)||(47683667-47683759)
chr1 (180-236)||(11405495-11405552)
chr1 (176-257)||(24253639-24253720)
chr1 (176-236)||(29332323-29332383)
chr1 (176-256)||(42946463-42946543)
chr1 (176-262)||(49239843-49239922)
chr1 (152-261)||(8310668-8310773)
chr1 (177-236)||(35309763-35309822)
chr1 (180-233)||(15774311-15774365)
chr1 (180-236)||(9527465-9527522)
chr1 (195-236)||(9768824-9768865)
chr1 (191-236)||(11238039-11238084)
chr1 (180-236)||(15368844-15368901)
chr1 (177-241)||(32635174-32635239)
chr1 (176-233)||(44583629-44583686)
chr1 (167-256)||(52720703-52720792)
chr1 (178-262)||(35527334-35527417)
chr1 (177-236)||(17350100-17350159)
chr1 (179-262)||(23368731-23368814)
chr1 (189-236)||(42367754-42367801)
chr1 (177-236)||(52833103-52833162)
chr1 (216-262)||(17916720-17916766)
chr1 (176-262)||(30325039-30325124)
chr1 (180-233)||(49916482-49916536)
chr1 (177-226)||(2350372-2350421)
chr1 (180-236)||(4429481-4429538)
chr1 (179-227)||(17871079-17871128)
chr1 (176-261)||(22779237-22779322)
chr1 (166-262)||(25421867-25421964)
chr1 (176-257)||(35195607-35195688)
chr1 (194-227)||(37203236-37203269)
chr1 (180-236)||(37733794-37733851)
chr1 (195-236)||(41182813-41182854)
chr1 (195-236)||(49251410-49251451)
chr1 (195-236)||(50199491-50199532)
chr1 (208-236)||(10632736-10632764)
chr1 (200-236)||(23233993-23234029)
chr1 (192-256)||(29917568-29917632)
chr1 (188-236)||(36310502-36310550)
chr1 (179-223)||(37239238-37239282)
chr1 (208-236)||(42490410-42490438)
[»] chr8 (63 HSPs)
chr8 (176-262)||(41454823-41454909)
chr8 (177-262)||(41845426-41845511)
chr8 (176-262)||(1032583-1032669)
chr8 (176-262)||(4259872-4259958)
chr8 (176-262)||(5904370-5904456)
chr8 (176-262)||(38289231-38289317)
chr8 (176-262)||(279993-280078)
chr8 (176-262)||(635774-635859)
chr8 (176-262)||(821577-821662)
chr8 (176-262)||(39104620-39104705)
chr8 (146-262)||(19733038-19733151)
chr8 (194-262)||(16973035-16973103)
chr8 (167-262)||(43456640-43456734)
chr8 (146-262)||(34037917-34038030)
chr8 (146-258)||(43413855-43413964)
chr8 (176-261)||(19957317-19957402)
chr8 (185-262)||(36103927-36104004)
chr8 (179-262)||(3311453-3311536)
chr8 (146-262)||(1360104-1360216)
chr8 (176-262)||(38063990-38064076)
chr8 (166-262)||(38544911-38545006)
chr8 (211-262)||(13906657-13906708)
chr8 (176-262)||(22652696-22652782)
chr8 (188-262)||(30466692-30466766)
chr8 (176-262)||(33820391-33820477)
chr8 (176-262)||(36587646-36587732)
chr8 (177-262)||(44828429-44828515)
chr8 (176-262)||(45536731-45536817)
chr8 (211-260)||(10161979-10162028)
chr8 (176-261)||(10201276-10201361)
chr8 (176-254)||(31153505-31153584)
chr8 (141-257)||(30659971-30660084)
chr8 (191-236)||(25139898-25139943)
chr8 (190-262)||(8350449-8350521)
chr8 (180-231)||(14683920-14683972)
chr8 (177-257)||(43508445-43508525)
chr8 (179-262)||(8349482-8349565)
chr8 (176-256)||(23139093-23139175)
chr8 (177-236)||(35301160-35301219)
chr8 (180-236)||(4798540-4798597)
chr8 (180-236)||(9524996-9525053)
chr8 (180-236)||(13537310-13537367)
chr8 (180-236)||(13626858-13626915)
chr8 (180-236)||(15042364-15042421)
chr8 (179-236)||(17855688-17855745)
chr8 (180-236)||(24608482-24608539)
chr8 (177-236)||(2696572-2696631)
chr8 (177-236)||(2800058-2800117)
chr8 (182-236)||(44923298-44923353)
chr8 (176-262)||(11052580-11052666)
chr8 (177-224)||(41430865-41430914)
chr8 (180-233)||(43468704-43468758)
chr8 (195-236)||(574264-574304)
chr8 (180-224)||(8740655-8740700)
chr8 (180-236)||(10309659-10309716)
chr8 (191-236)||(14011049-14011094)
chr8 (195-236)||(25119247-25119288)
chr8 (195-232)||(31129345-31129382)
chr8 (180-236)||(33570428-33570485)
chr8 (180-236)||(39484369-39484426)
chr8 (177-257)||(10621372-10621452)
chr8 (178-210)||(36372720-36372752)
chr8 (200-236)||(37708733-37708769)
[»] chr2 (67 HSPs)
chr2 (165-258)||(3330186-3330279)
chr2 (146-262)||(33065226-33065339)
chr2 (146-262)||(17543059-17543172)
chr2 (176-262)||(34107508-34107593)
chr2 (167-261)||(42678311-42678405)
chr2 (176-249)||(18424148-18424221)
chr2 (176-258)||(19843359-19843441)
chr2 (176-262)||(41749960-41750045)
chr2 (177-259)||(5901828-5901910)
chr2 (176-262)||(31149098-31149183)
chr2 (177-262)||(6866521-6866606)
chr2 (176-227)||(20435829-20435880)
chr2 (175-261)||(24202164-24202250)
chr2 (180-261)||(1962840-1962921)
chr2 (180-236)||(9796936-9796993)
chr2 (176-262)||(11069345-11069427)
chr2 (175-234)||(29090456-29090515)
chr2 (176-259)||(40203275-40203358)
chr2 (176-262)||(18949681-18949766)
chr2 (176-262)||(33482638-33482724)
chr2 (180-236)||(11133115-11133172)
chr2 (176-257)||(33613601-33613682)
chr2 (146-261)||(36755636-36755748)
chr2 (166-262)||(25553132-25553227)
chr2 (180-234)||(19905654-19905709)
chr2 (167-262)||(27463514-27463608)
chr2 (176-222)||(35710167-35710213)
chr2 (176-262)||(43027168-43027254)
chr2 (180-236)||(3037621-3037678)
chr2 (180-236)||(17239940-17239997)
chr2 (191-236)||(19052622-19052667)
chr2 (176-241)||(25783210-25783275)
chr2 (180-236)||(29664642-29664699)
chr2 (176-225)||(37886221-37886270)
chr2 (176-261)||(42541170-42541254)
chr2 (175-224)||(43684329-43684378)
chr2 (173-261)||(12183728-12183816)
chr2 (176-236)||(20375632-20375692)
chr2 (177-242)||(23405232-23405299)
chr2 (195-235)||(32256176-32256216)
chr2 (194-234)||(33116221-33116261)
chr2 (177-236)||(29035015-29035074)
chr2 (176-229)||(3548794-3548845)
chr2 (180-233)||(8234791-8234845)
chr2 (183-236)||(17154688-17154742)
chr2 (180-233)||(20122474-20122528)
chr2 (195-233)||(36520795-36520833)
chr2 (191-236)||(279809-279854)
chr2 (195-236)||(580798-580839)
chr2 (195-236)||(1244608-1244649)
chr2 (195-228)||(1836635-1836668)
chr2 (180-236)||(9547126-9547183)
chr2 (195-236)||(10262778-10262819)
chr2 (229-262)||(16403538-16403571)
chr2 (208-253)||(17777163-17777208)
chr2 (191-236)||(25731973-25732018)
chr2 (191-236)||(32891320-32891365)
chr2 (180-236)||(36665469-36665526)
chr2 (195-236)||(41699141-41699182)
chr2 (195-236)||(44187743-44187784)
chr2 (180-236)||(44721703-44721760)
chr2 (197-233)||(2304332-2304368)
chr2 (208-236)||(3596292-3596320)
chr2 (208-236)||(5947908-5947936)
chr2 (208-236)||(15069799-15069827)
chr2 (208-236)||(38557223-38557251)
chr2 (207-255)||(44666342-44666390)
[»] scaffold0011 (1 HSPs)
scaffold0011 (177-236)||(15328-15387)
[»] scaffold0018 (1 HSPs)
scaffold0018 (211-262)||(121830-121881)
[»] scaffold0054 (1 HSPs)
scaffold0054 (179-261)||(22473-22555)
[»] scaffold0178 (2 HSPs)
scaffold0178 (195-236)||(16104-16145)
scaffold0178 (195-236)||(4362-4403)
[»] scaffold1112 (1 HSPs)
scaffold1112 (179-236)||(2438-2493)
[»] scaffold0010 (1 HSPs)
scaffold0010 (198-236)||(236347-236385)
[»] scaffold0039 (1 HSPs)
scaffold0039 (180-236)||(101870-101927)


Alignment Details
Target: chr4 (Bit Score: 152; Significance: 2e-80; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 24570481 - 24570219
Alignment:
Q  1 tttatgtcagtgtcaatgaaaaatgtatgtcacttcaaagtttttgtactagaacaccactaagaagaatgaaattggaaacaatccaaattgctgagat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  24570481 tttatgtcagtgtcaatgaaaaatgtatgtcacttcaaagtttttgtactagaacaccactgagaagaatgaaattgcaaacaatccaaattgctgagat 24570382  T
Q  101 atataactaattatannnnnnnnaggacta-gttcaacacaatttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaat 199  Q
    |||||||||||||||        |||| ||  ||||||||||||| |||||||||||||||| |    ||||| || ||||||||||||||||| |||||    
T  24570381 atataactaattata-tttttttaggaatacattcaacacaattttttttttggtcaagtagtc---cagtggccgaagaaattcaccttaaagttgaat 24570286  T
Q  200 aagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaaaatg 266  Q
    ||||||| ||| ||||||||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  24570285 aagtagggtgttcggggttcgaaccccaacccctacatatattgtgcattatcccttaccaaaaatg 24570219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 16556550 - 16556464
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16556550 gagaaattcaccttaaagatgaataagtggggtgttcggggttcgaaccccgacccctgcacatattgtgcattatcccttaccaaa 16556464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 46283221 - 46283135
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||||||||| |||||||||||||||||    
T  46283221 gagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccgctgcacatattgtgcattatcccttaccaaa 46283135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 51974873 - 51974760
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   || ||||||||||||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||||     
T  51974873 ttttttggtcaagtagcct---agtggctagataaattcaccttaaagataaataagtgggatgtccgaggttcgaatcccgacccctgcacatattgtg 51974777  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  51974776 cattatcccttaccaaa 51974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 40406956 - 40407043
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaa-ccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  40406956 gagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacccccggcccctgcacatattgtgcattatcccttaccaaa 40407043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 45355714 - 45355795
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttac 258  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  45355714 gagaaattcaccttaaagatgaataagtggg-tgtccggggttcgaaccccgacccctacacatattgtgcattatcccttac 45355795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 45369455 - 45369536
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttac 258  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  45369455 gagaaattcaccttaaagatgaataagtggg-tgtccggggttcgaaccccgacccctacacatattgtgcattatcccttac 45369536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 43362165 - 43362250
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||    
T  43362165 agaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgaatatattgtgcattatcccttagcaaa 43362250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 45847923 - 45848008
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||    
T  45847923 agaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgatccctgcacatattatgcattatcccttatcaaa 45848008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 22096387 - 22096473
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||||| || ||||||| ||||||||| || |||||||||||||||| |||||||||||||||||    
T  22096387 gagaaattcaccttaaaaatgaataagtggggtgtccggagttcgaacctcggcccctgcacatattgtgcattatcccttaccaaa 22096473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 11491188 - 11491295
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||||| || |||||||||||||||| ||| |||||||||| ||| |     
T  11491188 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccggcccctgcacaaattatg 11491284  T
Q  246 cattatccctt 256  Q
    |||||||||||    
T  11491285 cattatccctt 11491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 36993140 - 36993054
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||| | || |||||||||||| |||||| |||||| |||||||||| |||||||||||| ||||    
T  36993140 gagaaattcaccttaaagatgaataattggggtgtccggggttcaaaccccaaccccttcacatattgtgcattatcccttatcaaa 36993054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 42154665 - 42154579
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||| |||||    ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  42154665 gagaaattcaccttaaagatgattaagtgaagtgtccggggttcgaaccccgacctctgcacatattgtgaattatcccttaccaaa 42154579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 38690765 - 38690680
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||||||||||||||||  |||||||| || ||||||||||||||||||||||||||||| ||| | | ||||||||||||||||    
T  38690765 gagaaattcaccttaaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttaccaa 38690680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 48404134 - 48404219
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||||||| ||| |||||||| ||||||||| |||| ||||    
T  48404134 agaaattcaccttaaagatgaataagtgaggtgtccggggttcgaaccccgacacctacacatattatacattatctcttatcaaa 48404219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 50815832 - 50815720
Alignment:
Q  147 tttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtac 246  Q
    ||||||||||||||||||   |||||   |||||||||||||| |||||||||| || || |||||||||||||||||||| |||||||||| ||||| |    
T  50815832 tttttggtcaagtagcct---agtggctagagaaattcacctttaagatgaatatgtggggtgtccggggttcgaaccccggcccctgcacaaattgtgc 50815736  T
Q  247 attatcccttaccaaa 262  Q
    ||||||| ||| ||||    
T  50815735 attatcctttatcaaa 50815720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 2832071 - 2832151
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacca 260  Q
    |||||||||||||||||||||||| || |||  |||||||||||||||||||||||||||||||| ||| | |||||||||    
T  2832071 aattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctgcacatattgtgcatcaccccttacca 2832151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 23449068 - 23448986
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||| ||||||||| |||||||||| || ||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  23449068 aaatccaccttaaa-atgaataagtggggtgttcggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaaa 23448986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 29430593 - 29430511
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||| | | |||| |||||||||||    
T  29430593 aaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgatcactgcatataatatgcattgtcccttaccaa 29430511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 35909013 - 35909107
Alignment:
Q  165 cttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaacc-ccgacccctgcacatattgtacattatcccttac 258  Q
    ||||||||| ||| ||||||||||||||||| ||||||| || |||| ||| |||||||| |||||||||||| ||||||| |||||||||||||    
T  35909013 cttagtggttggaaaaattcaccttaaagataaataagtggggtgtctgggattcgaacctccgacccctgcatatattgtgcattatcccttac 35909107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 25234845 - 25234940
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||  |||||||||||||||||||||||||| | || |||| |||||||||||| | |||||| ||| |||||| |||||||||||| ||||    
T  25234845 tagtggttagagaaattcaccttaaagatgaataactggggtgtctggggttcgaacctcaacccctacacttattgtgcattatcccttatcaaa 25234940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 41271981 - 41272060
Alignment:
Q  183 tcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| ||||||||||||| || ||||||| |||||||||| || ||||||| | |||||||||||||||||||||||    
T  41271981 tcacctttaagatgaataagtggggtgtccggagttcgaaccctgaaccctgcataaattgtacattatcccttaccaaa 41272060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 8716650 - 8716567
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||  ||||||||||| | |||||||| ||||||||| || ||| |||||||||||| |||||||||||||||||    
T  8716650 gagaaattcacctta--gatgaataagtggaatgtccggagttcgaacctcggccc-tgcacatattgtgcattatcccttaccaaa 8716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 27862842 - 27862913
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||| || |||||||||||||||||||  |||||||||| ||||| |||||||||||| ||||    
T  27862842 aagatgaataagtggggtgtccggggttcgaaccccagcccctgcacaaattgtgcattatcccttatcaaa 27862913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 43084546 - 43084460
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |  || || |||||||||||||||||  | ||||||| |||||| ||||||||||    
T  43084546 gagaaattcaccttaaagatgaataagtggggtaaccaggattcgaaccccgacccctatatatattgtgcattattccttaccaaa 43084460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 37889602 - 37889675
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacatt 249  Q
    |||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||||| ||| | ||||||    
T  37889602 gagaaattcaccttaaaagtgaataagtgaggtgtccggggttcgaaccccgacccctgcatataatatacatt 37889675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 44251326 - 44251383
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||    
T  44251326 aaattcaccttaaagatgaataaatggggtgtccgggattcgaaccccgacccctgca 44251383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 37574398 - 37574311
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||   |||||   |||||||||||||||||| ||||||||| || || |||||||| |||||||| ||||||||    
T  37574398 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaaggtgaataagtggggtgcccggggtttgaaccccggcccctgca 37574311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 56555647 - 56555587
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||| ||||||||| || ||| || ||||||||||||||||||||||    
T  56555647 gagaaattcaccttaaaggtgaataagtggggtgttcgaggttcgaaccccgacccctgca 56555587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 13210195 - 13210246
Alignment:
Q  211 ccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  13210195 ccggggttcgaaccccggcccctgcacatattgtgcattatccctgaccaaa 13210246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 254
Target Start/End: Original strand, 26885396 - 26885474
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccc 254  Q
    ||||||| |||||||||||| ||||||| |  |||||||||||||||||||| |||| ||| ||| ||| |||||||||    
T  26885396 gagaaatccaccttaaagataaataagtggagtgtccggggttcgaaccccggccccagcatataatgtgcattatccc 26885474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 33076610 - 33076569
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  33076610 tgaataagtagggtgtccggggttcgaaccccgacccctgca 33076569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 21200628 - 21200569
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||| ||||||||| || || |||| |||||||||||||||||||||    
T  21200628 gagaaattcaccttaaag-tgaataagtggggtgaccggagttcgaaccccgacccctgca 21200569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 8690312 - 8690253
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||||||||||||    
T  8690312 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgca 8690253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 22341822 - 22341944
Alignment:
Q  137 cacaatttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||| ||| |||||| ||||||||||||   || |||  |||||||||||||| |||||||| |||| || |||  ||| || ||||||| |||||| ||    
T  22341822 cacactttttttttttgtcaagtagcct---agcggttagagaaattcacctttaagatgaacaagtggggtgtttgggatttgaaccccaacccctaca 22341918  T
Q  237 catattgtacattatcccttaccaaa 262  Q
    |||||||| |||||||  ||||||||    
T  22341919 catattgtgcattatcttttaccaaa 22341944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 2824692 - 2824634
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||||||||||| ||||  ||| |||||||||| |||||||| |||||||||    
T  2824692 ggagaaattcaccttaaaggtgaaatagtgggatgtccggagttcgaactccgacccct 2824634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 11872953 - 11872915
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  11872953 tgaataagtaggatgtccggggttcgaactccgacccct 11872915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 24253136 - 24253190
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||| |||||| ||||| ||||| |||||||||||| ||||    
T  24253136 tgtccggggttcgaaccctgaccccagcacaaattgtgcattatcccttatcaaa 24253190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 6637721 - 6637778
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||||| |||||||||    
T  6637721 aattcaccttataagatgaataagtggggtgttcggggttcgaaccccaacccctgca 6637778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 22158343 - 22158286
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| ||||||||| | ||||||||||||||||||||    
T  22158343 aattcaccttataaggtgaataagttggatgtccgagtttcgaaccccgacccctgca 22158286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 24234073 - 24234130
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||||||||||| ||||||| ||||||||    
T  24234073 aattcaccttataagatgaataagtggggtgtccggggttcaaaccccggcccctgca 24234130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 37032178 - 37032235
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||||||||||||||| |||||||||||||    
T  37032178 aattcaccttataaggtgaataagtggggtgtccggggttcgaatcccgacccctgca 37032235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 47017945 - 47018002
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  47017945 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 47018002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 11128818 - 11128746
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacatt 249  Q
    ||||||||||||| || |||||||| | ||| || ||||||||||||||| ||||||||| | ||| ||||||    
T  11128818 agaaattcacctttaaaatgaataaatgggaagttcggggttcgaacccctacccctgcataaattatacatt 11128746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 9693060 - 9693001
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  9693060 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 9693001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 14149891 - 14149832
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  14149891 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 14149832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 28520728 - 28520787
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  28520728 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 28520787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 36954235 - 36954176
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||| | || |||||||||||||||||||||||||||||    
T  36954235 agaaattcacttttaaagtgaataaatggggtgtccggggttcgaaccccgacccctgca 36954176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 39387558 - 39387491
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||  |||||||||  | | |||||||||| ||| | |||||||||||||||||    
T  39387558 tgaataagtaggatgtctagggttcgaagtcgggcccctgcacaaattatgcattatcccttaccaaa 39387491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 42411471 - 42411510
Alignment:
Q  197 aataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  42411471 aataagtggggtgtccggggttcgaaccccgacccctgca 42411510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 48968207 - 48968266
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  48968207 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 48968266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 52031305 - 52031246
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||| ||||||||||||||||||||||||    
T  52031305 agaaattcacttttaaagtgaataagtggggtgtctggggttcgaaccccgacccctgca 52031246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 52366267 - 52366220
Alignment:
Q  215 ggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||    
T  52366267 ggttcgaacttcaacccctgcacatattgtgcattatcccttaccaaa 52366220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 225
Target Start/End: Complemental strand, 6202687 - 6202653
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccc 225  Q
    |||||||||||||||| ||||||||||||||||||    
T  6202687 aagatgaataagtagggtgtccggggttcgaaccc 6202653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 8716398 - 8716472
Alignment:
Q  188 ttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||| ||||||| || ||||  |||||||||||  |||  ||||||||||||| |||||||||||| ||||    
T  8716398 ttaaagataaataagtggggtgtcgagggttcgaaccttgacttctgcacatattgtgcattatcccttatcaaa 8716472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 9924953 - 9924895
Alignment:
Q  179 aaattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || ||| ||||||||| |  |||||||||||||||||||||||||||||    
T  9924953 aaattcaccatacaaggtgaataagtggagtgtccggggttcgaaccccgacccctgca 9924895  T

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Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 12856280 - 12856226
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||| |||||||||    
T  12856280 aattcaccttataaggtgaataagtggggtgtccggggttcgaactccgacccct 12856226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 25104435 - 25104401
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataa 201  Q
    |||||| ||||||||||||||||||||||||||||    
T  25104435 tagtggccggagaaattcaccttaaagatgaataa 25104401  T

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Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 26203786 - 26203840
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||    
T  26203786 aattcaccttataagatgaataagtgggatgtcaggggttcaaaccccaacccct 26203840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 27091458 - 27091500
Alignment:
Q  194 atgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||    
T  27091458 atgaagaagtgggatgtccggggttcgaactccgacccctgca 27091500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 52330880 - 52330970
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatat 241  Q
    |||||||||||||||||   |||||||| |||  ||||||| || ||  ||||||||| || ||||||| |||||||||||| |||||||| ||||    
T  52330880 ttttttggtcaagtagc---ttagtggttgga--aattcacttttaaagtgaataagtggggtgtccggagttcgaaccccggcccctgcatatat 52330970  T

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Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 1589168 - 1589213
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| | |||||||||||||||||| || ||||||||||    
T  1589168 aagatgaataaatgggatgtccggggttcgaatcctgacccctgca 1589213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 3465679 - 3465622
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||| ||| ||||||||    
T  3465679 aattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgca 3465622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 9084843 - 9084798
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| || |||||| |||||||| |||||||||||||    
T  9084843 aagatgaataagtggggtgtccgaggttcgaatcccgacccctgca 9084798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 10098209 - 10098164
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| || ||||||||||||||| |||| ||||||||    
T  10098209 aagatgaataagtggggtgtccggggttcgaatcccggcccctgca 10098164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 12820404 - 12820461
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||||| |||||| ||||||||||||||||    
T  12820404 aattcaccttataaggtgaataagtggggtgtccagggttctaaccccgacccctgca 12820461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 20610819 - 20610778
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| |||||||||| |||||||||||| ||||||||    
T  20610819 tgaataagtgggatgtccggagttcgaaccccggcccctgca 20610778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 21476092 - 21476137
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| |||||||||| ||||||||  |||||||||||    
T  21476092 aagatgaataagtgggatgtccggagttcgaacatcgacccctgca 21476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 27921980 - 27921935
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||    
T  27921980 aagatgaataagtgagatgtctggggttcgaaccccggcccctgca 27921935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 32037666 - 32037581
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||||||||| |||||  ||||||| | |||| ||| || || ||||||||||||||||| ||| | | |||||||||| |||||    
T  32037666 gagaaattcactttaaatgtgaataaatgggatatccaggatttgaaccccgacccctgcatataatatgcattatccctaaccaa 32037581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 32885784 - 32885727
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||| ||||||||| ||||||||||||    
T  32885784 aattcaccttataaggtgaataagtggggtgtccgaggttcgaactccgacccctgca 32885727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 36008371 - 36008314
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||| |||||||||||||||| ||||||||    
T  36008371 aattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgca 36008314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 36257774 - 36257733
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||| ||||||||    
T  36257774 tgaataagtggggtgtccggggttcgaaccccggcccctgca 36257733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 40150571 - 40150514
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctg 234  Q
    |||||||||| || ||  |||||||||  | |||||||||||||||||||||||||||    
T  40150571 agaaattcacttttaaagtgaataagtgaggtgtccggggttcgaaccccgacccctg 40150514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 49319473 - 49319432
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || ||||||||||| |||||||||||||||||    
T  49319473 tgaataagtggggtgtccggggttggaaccccgacccctgca 49319432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 51707217 - 51707137
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttac 258  Q
    ||||||||||||||||||||||||||| || |||  | ||||||||||||  ||| | |||||||| |  ||||||||||||    
T  51707217 agaaattcaccttaaagatgaataagt-gggtgtttgaggttcgaaccccagcccgtacacatattatgtattatcccttac 51707137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 53697979 - 53698036
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| | ||||||| || |||||||||||||||||||| ||||||||    
T  53697979 aattcaccttataaggtaaataagtggggtgtccggggttcgaaccccggcccctgca 53698036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 13578465 - 13578493
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  13578465 tgtccggggttcgaaccccgacccctgca 13578493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 18497471 - 18497431
Alignment:
Q  196 gaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  18497471 gaataagtgggatgtccggagttcgaaccccaacccctgca 18497431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 23176721 - 23176749
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  23176721 tgtccggggttcgaaccccgacccctgca 23176749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 35747482 - 35747538
Alignment:
Q  181 attcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| ||| ||||||||| || ||||||| ||||||||| |||||||||||    
T  35747482 attcaccttataaggtgaataagtggggtgtccggagttcgaacctcgacccctgca 35747538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 37274664 - 37274628
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccg 227  Q
    ||||||||||||| || ||||||||||||||||||||    
T  37274664 aagatgaataagtggggtgtccggggttcgaaccccg 37274628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 38848120 - 38848148
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  38848120 tgtccggggttcgaaccccgacccctgca 38848148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 45141232 - 45141284
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgaccc 231  Q
    ||||||||||| || ||||||||||  | ||||||||||||||||||||||||    
T  45141232 aattcaccttataacatgaataagtgaggtgtccggggttcgaaccccgaccc 45141284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 55021624 - 55021596
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  55021624 tgtccggggttcgaaccccgacccctgca 55021596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 146 - 263
Target Start/End: Original strand, 4956061 - 4956175
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||     
T  4956061 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtccagggttcgaaccccgacccctgcacatattgtg 4956157  T
Q  246 cattatcccttaccaaaa 263  Q
    ||||||||||||||||||    
T  4956158 cattatcccttaccaaaa 4956175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 48433674 - 48433792
Alignment:
Q  141 atttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacata 240  Q
    |||| |||||||||||||||||||   |||||   |||||||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||||    
T  48433674 attttttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtccggggtttgaaccccggcccctgcacata 48433770  T
Q  241 ttgtacattatcccttaccaaa 262  Q
    |||| |||||||||||||||||    
T  48433771 ttgtgcattatcccttaccaaa 48433792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 40273920 - 40273834
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  40273920 gagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 40273834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 31793567 - 31793481
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  31793567 gagaaatccaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgcacatattgtgcattatcccttaacaaa 31793481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 33248799 - 33248884
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||    
T  33248799 agaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacctctgcatatattgtgcatcatcccttaccaaa 33248884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 38378318 - 38378232
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||||| || |||||||||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  38378318 gagaaattcaccttaaaaatgaataagtggggtgtccggggttcaaaccccggcccctgcacatattgtgcattatcccttaccaaa 38378232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 42554731 - 42554647
Alignment:
Q  178 gaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||||||||| || | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  42554731 gaaattcaccataaagatgaataagtcgggtatccggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaaa 42554647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 12166181 - 12166095
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||||||  |||||||||| ||||| |||||||||||||||||    
T  12166181 gagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatcccttaccaaa 12166095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 23824588 - 23824673
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||| |||||||||||| |||||||||||||||||    
T  23824588 gagaaattcaccttaaagatgaataagtagggtgtcc-gggttcgaacctcggcccatgcacatattgtgcattatcccttaccaaa 23824673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 43440788 - 43440702
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||| ||  |||||||||||||| ||||||||||||| |||||||||||||||||    
T  43440788 gagaaattcaccttaaagatgaataagtggggtgtctggaattcgaaccccgacctctgcacatattgtgcattatcccttaccaaa 43440702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 27454138 - 27454024
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgt 244  Q
    |||||||||||||||||||   |||||   ||||||||||||||  ||||||||||||| || |||||| |||||||||| ||||||||||||| |||||    
T  27454138 ttttttggtcaagtagcct---agtggctagagaaattcaccttttaagatgaataagtggggtgtccgaggttcgaacctcgacccctgcacaaattgt 27454042  T
Q  245 acattatcccttaccaaa 262  Q
     |||||||||||||||||    
T  27454041 gcattatcccttaccaaa 27454024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 36528218 - 36528301
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||| ||||||| || ||||||||||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  36528218 aaattcaccttaaaaatgaataggtgggatgtccggggttcgaactccgacccctatacatattgtgcattatcccttaccaaa 36528301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 3961404 - 3961490
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||||||| || ||||||| ||||| |||||||| ||||||||    
T  3961404 gagaaattcacctttaaaatgaataagtgggatgtccggggttcgaaccccggcctctgcacaaattgtgcattatcctttaccaaa 3961490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 24030084 - 24029998
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||| | || |||| ||||||||||||||| ||||| |||||||||| |||||||||||| ||||    
T  24030084 gagaaattcaccttaaagatgaataaatggggtgtctggggttcgaaccccggcccctacacatattgtgcattatcccttatcaaa 24029998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 3889796 - 3889877
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccc-cgacccctgcacatattgtacattatccctt 256  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||  | |||||||| |||||||||||||||||||    
T  3889796 gagaaattcacctttaagatgaataagtggggtgtccggggttcgaaccctggccccctgcatatattgtacattatccctt 3889877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 46266764 - 46266681
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||| ||||||||||||| |||||| |  ||||||||||||| |||| ||||| ||||| |||||||||||||||||    
T  46266764 aaattcacctttaagatgaataagtgggatgttcaaggttcgaaccccgtcccccgcacaaattgtgcattatcccttaccaaa 46266681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 48619895 - 48619810
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| |  |||| |  ||||||||||  |||||||||||||||||||||||||| ||||||||    
T  48619895 gagaaattcaccttaaagatgaataagtggagtgtctgaagttcgaaccca-acccctgcacatattgtacattatcctttaccaaa 48619810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 22156205 - 22156111
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||  |||||||||| |||| |||||||||||| || ||||| | |||||||||  || ||| |||||||||||||||||||||||||||||    
T  22156205 tagtggttagagaaattcatcttatagatgaataagtggggtgtccagcgttcgaaccatgatccc-gcacatattgtacattatcccttaccaaa 22156111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 22212120 - 22212026
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||  |||||||||| |||| |||||||||||| || ||||| | |||||||||  || ||| |||||||||||||||||||||||||||||    
T  22212120 tagtggttagagaaattcatcttatagatgaataagtggggtgtccagcgttcgaaccatgatccc-gcacatattgtacattatcccttaccaaa 22212026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 46196018 - 46195936
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    ||||||||||||||||||| ||||  ||| || |||||||||||| |||||||||||||||| | ||  ||||||||||||||    
T  46196018 ggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcaaaccccgacccctgcatacataatacattatccctta 46195936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 28914846 - 28914958
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaacccc-gacccctgcacatattgt 244  Q
    |||||||||||||||||||   |||||   |||||||||||||| ||  ||||||||| || ||||||||||||||||||| | |||||||| ||| | |    
T  28914846 ttttttggtcaagtagcct---agtggctagagaaattcacctttaaagtgaataagtggggtgtccggggttcgaaccccggccccctgcatataatat 28914942  T
Q  245 acattatcccttacca 260  Q
     |||||||||||||||    
T  28914943 gcattatcccttacca 28914958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 262
Target Start/End: Complemental strand, 37918789 - 37918693
Alignment:
Q  166 ttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccgggg-ttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||  ||||||||||||| ||||||||||||||  | ||||||||| ||||||||||||| ||| ||||| |||| |||||||||||| ||||    
T  37918789 ttagtggttagagaaattcacctaaaagatgaataagtgaggtgtccggggattcgaaccccgacgcctacacat-ttgtgcattatcccttatcaaa 37918693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 44662458 - 44662542
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacc 259  Q
    ||||||||||||||||||| ||||  ||| || |||||||||||||||||||| |||||||| | ||  | ||||||||||||||    
T  44662458 ggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatcccttacc 44662542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 24315341 - 24315431
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttac 258  Q
    |||||||  ||||| ||||||||||| || ||||||| | ||||  ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  24315341 tagtggttagagaagttcaccttaaa-ataaataagtggaatgtatggggttcgaaccccgacccctacacatattgtgcattatccattac 24315431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 42338266 - 42338329
Alignment:
Q  199 taagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||| || |||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||    
T  42338266 taagtggggtgtccgggattcgaaccccgtcccctgcacatattgtgcattattccttaccaaa 42338329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 14707391 - 14707306
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||  ||||| ||||||||| || ||||||||||||||||||| ||||||||| |||   | |||||||||||||||||    
T  14707391 gagaaattcactataaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatata-aatgcattatcccttaccaaa 14707306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 15025255 - 15025169
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||| ||||||||| || ||| ||||||| |||||||| |||||| | | | | | |||||||||||||||||    
T  15025255 gagaaattcaccttaaaggtgaataagtggggtgttcggggtttgaaccccggcccctgtataaaatatgcattatcccttaccaaa 15025169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 42841777 - 42841843
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    |||||||||||||| ||||||||||||| || |||| |||||||||||||||  || ||||||||||    
T  42841777 gagaaattcacctttaagatgaataagtggggtgtctggggttcgaaccccggtccttgcacatatt 42841843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 5228169 - 5228109
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||| ||||||||| || ||||| || ||||||||||| ||||||||    
T  5228169 gagaaattcaccttaaaggtgaataagtggggtgtccaggattcgaaccccggcccctgca 5228109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 10091453 - 10091513
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||| ||||||||| || ||||  |||||||||||||| ||||||||    
T  10091453 gagaaattcaccttaaaggtgaataagttgggtgtctagggttcgaaccccggcccctgca 10091513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 18128901 - 18128969
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgt 244  Q
    ||||||||||||||||||||||||||||  | ||| ||||||| || ||| ||||||| ||||||||||    
T  18128901 gagaaattcaccttaaagatgaataagtgagttgttcggggtttgagcccggacccctacacatattgt 18128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 20529995 - 20529935
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||| ||||||||| || ||||||||| | ||||||||| |||||||    
T  20529995 gagaaattcaccttaaaggtgaataagtggggtgtccggggcttgaaccccgatccctgca 20529935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 1575766 - 1575707
Alignment:
Q  203 taggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||| |||| |||||||||||||| ||||||| |||||||||  ||||||||||||||||    
T  1575766 tagggtgtctggggttcgaaccccaacccctgtacatattgtgtattatcccttaccaaa 1575707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 33202553 - 33202608
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctg 234  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  33202553 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctg 33202608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 37665842 - 37665783
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||  |||||||| || ||||||||||| |||||||| ||||||||    
T  37665842 agaaattcaccttaaaggcgaataagtggggtgtccggggtttgaaccccggcccctgca 37665783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 34322020 - 34322106
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||| || ||||||||||| | || |||| ||| ||| ||||||   ||||||||||||||| |||||||||||| ||||    
T  34322020 gagaaattcacgtttaagatgaataaatggggtgtctgggattcaaaccccagtccctgcacatattgtgcattatcccttatcaaa 34322106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 44986689 - 44986607
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| |||||| |||||| || |||  |||||||||| |||| || ||||||  ||||| |||||||||||||||||    
T  44986689 aattcacctttaagatggataagtggggtgtttggggttcgaatcccggccactgcactaattgtgcattatcccttaccaaa 44986607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 46243390 - 46243304
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||| ||||||||| || ||| ||| |||||||| |||| ||||  | ||| | | |||||||||||||||||    
T  46243390 gagaaattcaccttaaaggtgaataagtggggtgttcggagttcgaactccgatccctatatataatatgcattatcccttaccaaa 46243304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 48525665 - 48525591
Alignment:
Q  187 cttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||||| |||||||||  | ||||||||||||||||||| ||||||||| ||| | | |||| |||||||||||    
T  48525665 cttaaaggtgaataagtgaggtgtccggggttcgaaccccaacccctgcatataatatgcattgtcccttaccaa 48525591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 11808118 - 11808077
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  11808118 tgaataagtggggtgtccggggttcgaaccccgacccctgca 11808077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 21285352 - 21285409
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  21285352 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 21285409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 25775609 - 25775694
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||||||||||||| || |||  || ||||||||| ||   | |||| ||||| |||||||||| |||||||    
T  25775609 gagaaattcaccttaaagatgaataagtggggtgtttggagttcgaacctcggttcttgcatatattatacattatcctttaccaa 25775694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 29658271 - 29658328
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  29658271 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 29658328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 47552309 - 47552252
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||| ||| ||||    
T  47552309 aattcaccttataaggtgaataagtagggtgtccggggttcgaaccccggcccttgca 47552252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 40011811 - 40011751
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| |||||  | ||||||| |||||| ||||||||||||| |||||||||||    
T  40011811 gagaaattcactttaaaagtaaataagtgggatgttcggggttcgaacctcgacccctgca 40011751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 6548681 - 6548759
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccg 227  Q
    |||||| ||||||||||||   || || |||||||||||||||||||| ||||  ||| || ||||||| ||||||||||||    
T  6548681 tttttttgtcaagtagcct---agcggccggagaaattcaccttaaaggtgaaatagtggggtgtccggagttcgaaccccg 6548759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 13295370 - 13295457
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||| ||||  | |  ||| |||| ||||||||||||||||||| || | ||  ||||||||| |||||||||    
T  13295370 ggagaaattcaccttaaaggtgaaataatgagatatccgaggttcgaaccccgacccctacatacataatacattatctcttaccaaa 13295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 24397043 - 24396984
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  |||||||||||| ||||| |||||||||| ||||||||||||    
T  24397043 agaaattcacttttaaagtgaataagtagggtgtccagggttcgaactccgacccctgca 24396984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 41468935 - 41468849
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||| |||| |||||||||||||| |||  | |||| |||| | ||||| |||||| ||||| ||||| |||||||||||    
T  41468935 ggagaaattcactttaa-gatgaataagtagggtgtttgaggtttgaactctgacccttgcacaaattgtgcattaccccttaccaaa 41468849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 3902306 - 3902355
Alignment:
Q  212 cggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||| ||| |||||||||| | |||||||||||||||||    
T  3902306 cggggttcgaaccccggccc-tgcacatattttgcattatcccttaccaaa 3902355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 23602372 - 23602326
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaac 223  Q
    ||||||||||||||||| |||||||||  | ||||||||||||||||    
T  23602372 agaaattcaccttaaaggtgaataagtgaggtgtccggggttcgaac 23602326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 36977237 - 36977291
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacc 230  Q
    |||||| ||||||||||| ||||||| |||| |||||| ||||||||| ||||||    
T  36977237 gagaaactcaccttaaaggtgaataaatagggtgtccgaggttcgaacaccgacc 36977291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 47355890 - 47355848
Alignment:
Q  194 atgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| ||||||| ||||||||||||||| ||||||||    
T  47355890 atgaataagtgggatgtctggggttcgaaccccggcccctgca 47355848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 2261483 - 2261540
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||| ||||||||||| ||||||||    
T  2261483 aattcaccttataaggtgaataagttgggtgtccgggattcgaaccccggcccctgca 2261540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 5180706 - 5180747
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| |||||| |||||||||||||||||| ||||||    
T  5180706 tgaataagttggatgttcggggttcgaaccccgactcctgca 5180747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 8249764 - 8249719
Alignment:
Q  216 gttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||||||||||||||||||| ||||| | |||||||| |||||||    
T  8249764 gttcgaaccccgacccctgcatatattatgcattatcctttaccaa 8249719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 10020480 - 10020525
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| || ||| ||||||||||||||| |||||||||    
T  10020480 aagatgaataagtgggttgttcggggttcgaaccccaacccctgca 10020525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 14102557 - 14102500
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||| ||||||| ||||||||    
T  14102557 aattcaccttataaggtgaataagtggggtgtccggggttcaaaccccggcccctgca 14102500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 14412574 - 14412517
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||| ||||||| ||||||||    
T  14412574 aattcaccttataaggtgaataagtggggtgtccggggttcaaaccccggcccctgca 14412517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 26606105 - 26606162
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    |||||||||||||||||| ||||||||| |  ||||| |||||| ||||||| |||||    
T  26606105 gagaaattcaccttaaaggtgaataagtggagtgtccagggttcaaaccccggcccct 26606162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 38792308 - 38792251
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| |||||||||||| |||||||||||| ||| | ||||||||||    
T  38792308 aattcaccttataaggtgaataagtagggtgtccggggttcaaactctgacccctgca 38792251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 41417290 - 41417331
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  41417290 tgaataagtggggtgtctggggttcgaaccccgacccctgca 41417331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 43635668 - 43635627
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || ||||||||||||||||||||||| |||||    
T  43635668 tgaataagtggggtgtccggggttcgaaccccgaccgctgca 43635627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 3955056 - 3955100
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgc 235  Q
    ||||||||||||| || |||| |||||||||| ||||||||||||    
T  3955056 aagatgaataagtggggtgtctggggttcgaatcccgacccctgc 3955100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 9712198 - 9712226
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  9712198 tgtccggggttcgaaccccgacccctgca 9712226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 10624794 - 10624853
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||| |||||||||  | |||  ||||||||||||| ||||||||||    
T  10624794 gagaaattcaccttaaag-tgaataagtgcggtgtttggggttcgaaccctgacccctgca 10624853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 20013680 - 20013620
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| ||||||| || |||||| ||||||||||| |||||||  || ||||||||    
T  20013680 gagaaattcatcttaaaggtggataagtgggatgtccgggattcgaacttcggcccctgca 20013620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 28693853 - 28693885
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccg 227  Q
    |||||||||||| ||||||||||||||||||||    
T  28693853 tgaataagtagggtgtccggggttcgaaccccg 28693885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 28712413 - 28712381
Alignment:
Q  230 ccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||| |||||||||||||||||||    
T  28712413 ccctgcacatattatacattatcccttaccaaa 28712381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 30806193 - 30806157
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  30806193 aagtgggatgtccggggttcgaactccgacccctgca 30806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 36877014 - 36877042
Alignment:
Q  210 tccggggttcgaaccccgacccctgcaca 238  Q
    |||||||||||||||||||||||||||||    
T  36877014 tccggggttcgaaccccgacccctgcaca 36877042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 38025436 - 38025380
Alignment:
Q  181 attcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| ||||||||||||| | ||||||| |||||||||||| || ||||||    
T  38025436 attcaccttataagatgaataagtggaatgtccgaggttcgaaccccaactcctgca 38025380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 45284819 - 45284847
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  45284819 tgtccggggttcgaaccccgacccctgca 45284847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 6228229 - 6228342
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||     
T  6228229 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtg 6228325  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  6228326 cattatcccttaccaaa 6228342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 18903336 - 18903449
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||     
T  18903336 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtg 18903432  T
Q  246 cattatcccttaccaaa 262  Q
     |||||||||| |||||    
T  18903433 tattatcccttgccaaa 18903449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 4854293 - 4854388
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||  |||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  4854293 tagtggttagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacacattgtacattatcccttgccaaa 4854388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 20415526 - 20415640
Alignment:
Q  141 atttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacata 240  Q
    |||| ||||||||||||| |||||   |||||   |||||||||||||||||||||||||||| || |||||||||||||||||| | ||||||||||||    
T  20415526 attttttttttggtcaagcagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccctggcccctgcacata 20415622  T
Q  241 ttgtacattatcccttac 258  Q
    |||| |||||||||||||    
T  20415623 ttgtgcattatcccttac 20415640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 19748224 - 19748112
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||| ||||||||||||   ||||||| ||||||||||||||||| |||||||||| || |||||| |||||||||||| | |||||||||||||||     
T  19748224 tttttttgtcaagtagcct---agtggtcagagaaattcaccttaaa-atgaataagtggggtgtccgtggttcgaaccccaatccctgcacatattgtg 19748129  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  19748128 cattatcccttaccaaa 19748112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 24794891 - 24794977
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| |||||| |||||||||| |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  24794891 gagaaattcatcttaaatatgaataagtgggatgtccggggttcgaatcccaacccctgcacatattgtgcattatcccttaccaaa 24794977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 29321972 - 29322058
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  29321972 gagaaattcaccttaaagataaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaa 29322058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 7954918 - 7955005
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaaa 263  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||| ||| || |||||||||||||||| ||||||||||||||||||    
T  7954918 gagaaattcatcttaaagatgaataagtgggatgttcggggttcgcacctcgccccctgcacatattgtgcattatcccttaccaaaa 7955005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 17217057 - 17216971
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||| |||||||| | |||||||||||||||||    
T  17217057 gagaaattcaccttaaagatgaataagtggggtgtccggagttcgaactccgacccctacacatattatgcattatcccttaccaaa 17216971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 30422077 - 30422190
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||| ||||||||||||   ||||| | ||||||||||||||||| || ||||| |  | ||||||| |||||||||| ||||||| |||||||||||    
T  30422077 tttttttgtcaagtagcct---agtggccagagaaattcaccttaaaaataaataaatgtggtgtccggagttcgaacccggacccctacacatattgta 30422173  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  30422174 cattatcccttaccaaa 30422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 31637443 - 31637357
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| || |||||||||| |||||| || ||||||||||||||||||| ||||||| ||||||||| |||||||    
T  31637443 gagaaattcaccttaaaaataaataagtagggtgtccgaggctcgaaccccgacccctgcaaatattgtgcattatcccataccaaa 31637357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 11552967 - 11552884
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||| ||||||||||||||||||| || || | ||||||||||||||| |||||||||| ||||||| ||||||||| |||||    
T  11552967 aaatttaccttaaagatgaataagtggggtgcctggggttcgaaccccggcccctgcacacattgtacgttatcccttgccaaa 11552884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 3974540 - 3974474
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    |||||||||||||||||||||||||||| ||  |||||  |||||||||||||||||||||||||||    
T  3974540 gagaaattcaccttaaagatgaataagtggggagtccgaagttcgaaccccgacccctgcacatatt 3974474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 5948970 - 5948882
Alignment:
Q  176 gagaaattcaccttaaagatgaataagt-agga-----tgtccggggttcgaaccccgacccctgcacatattgtacattatcccttac 258  Q
    |||||||||||||||||||||||||||| |||      || ||||||||||||||||||||||||||||||| || |||||||||||||    
T  5948970 gagaaattcaccttaaagatgaataagtgaggtgcccgtgcccggggttcgaaccccgacccctgcacatatcgtgcattatcccttac 5948882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 1128412 - 1128501
Alignment:
Q  176 gagaaattcaccttaaagatga---ataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||   |||| | || |||| |||||||||||||| ||||||||||||||| | |||||||||||| ||||    
T  1128412 gagaaattcaccttaaagatgatgaataaatggggtgtctggggttcgaaccccaacccctgcacatattatgcattatcccttatcaaa 1128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 15717044 - 15717095
Alignment:
Q  211 ccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  15717044 ccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 15717095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 9357255 - 9357169
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||| ||||||| |  | |||| || |||||||||||  |||||||||| |||||||||||||||||| ||||    
T  9357255 gagaaattcaccttaaaggtgaataaattaggtgtctggagttcgaaccccagcccctgcacaaattgtacattatcccttatcaaa 9357169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 6025386 - 6025442
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
T  6025386 aattcaccttataagatgaataagt-ggatgtccggggttcgaatcccgacccctgca 6025442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 22983676 - 22983619
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||||    
T  22983676 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgca 22983619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 23804732 - 23804789
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||||    
T  23804732 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgca 23804789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 3448448 - 3448392
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgc 235  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||| |||||||    
T  3448448 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgc 3448392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 18618538 - 18618621
Alignment:
Q  178 gaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||| |||||||||||||||| || |||||||| |||||||||| |||| |  ||||||||| |||||||  ||||||||    
T  18618538 gaaattcac-ttaaagatgaataagtggggtgtccgggattcgaaccccaacccttatacatattgtgcattatcttttaccaaa 18618621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 5641686 - 5641737
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccg 227  Q
    |||||||||||||||||| ||||||||| || ||||||| ||||||||||||    
T  5641686 gagaaattcaccttaaaggtgaataagtggggtgtccggagttcgaaccccg 5641737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 11611468 - 11611418
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaacccc 226  Q
    ||||||||||| |||||||||||||||| || ||||| |||||||||||||    
T  11611468 gagaaattcacattaaagatgaataagtggggtgtccagggttcgaacccc 11611418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 25091095 - 25091181
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||| ||||||| ||||||||||||| || |||||| ||| |||||||||  ||||| ||| ||||| |||||||| || |||||    
T  25091095 gagaaaatcacctttaagatgaataagtggggtgtccgaggtacgaaccccggtccctgaacaaattgtgcattatcctttgccaaa 25091181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 32344736 - 32344678
Alignment:
Q  178 gaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| |||||| ||||||||| || ||||||| ||||||||||| |||||||||    
T  32344736 gaaattcactttaaaggtgaataagtggggtgtccggagttcgaaccccaacccctgca 32344678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 12101982 - 12101925
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||| ||| ||||||||    
T  12101982 aattcaccttataaggtgaataagtagggtgtccggggttcgaacgccggcccctgca 12101925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 20568252 - 20568319
Alignment:
Q  177 agaaattcaccttaa--agatgaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    ||||||||||||| |  || ||||||||| || ||| ||||||||||||||||||||||||| |||||    
T  20568252 agaaattcacctttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatatatt 20568319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 30833096 - 30833056
Alignment:
Q  196 gaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  30833096 gaataagtggggtgtccggggttcgaaccccgacccctgca 30833056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 9234163 - 9234112
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    ||||||||||| |||||||||  |||||||||||| |||||||||| |||||    
T  9234163 aagatgaataaataggatgtctagggttcgaaccctgacccctgcatatatt 9234112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 28536167 - 28536250
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||| |||||||||||||||    |||||| | ||| ||| ||| ||||||||||||||||| ||| |||||| |||||    
T  28536167 aaattcaccgtaaagatgaataagtgaagtgtccgagattcaaacaccggcccctgcacatattgtatattttcccttgccaaa 28536250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 2488872 - 2488914
Alignment:
Q  194 atgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||    
T  2488872 atgaagaagtgggatgtccggggttcgaactccgacccctgca 2488914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 3338304 - 3338350
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaac 223  Q
    ||||||||||||||||  |||||||||||| |||| |||||||||||    
T  3338304 agaaattcaccttaaatgtgaataagtagggtgtctggggttcgaac 3338350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 6658559 - 6658605
Alignment:
Q  196 gaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    |||||||| || |||||||||||||||||||| |||||||| |||||    
T  6658559 gaataagtggggtgtccggggttcgaaccccggcccctgcatatatt 6658605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 7563574 - 7563632
Alignment:
Q  179 aaattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||| ||| ||||||||| || ||||||||||| |||||| ||||||||||    
T  7563574 aaattcaccttataaggtgaataagtggggtgtccggggtttgaaccctgacccctgca 7563632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 7897118 - 7897152
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgcacatatt 242  Q
    ||||||||||||||||||||||||||||| |||||    
T  7897118 tgtccggggttcgaaccccgacccctgcatatatt 7897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 35065486 - 35065571
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||| |||||  |||||||||||  |||||| |||||||| |||| ||||| || | ||| | |||||||||||||||||    
T  35065486 gagaaattcactttaaatgtgaataagtagagtgtccgtggttcgaa-cccggcccctacataaattatgcattatcccttaccaaa 35065571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 3294847 - 3294806
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||| |||| || |||||||||||||||||||||||||||||    
T  3294847 tgaagaagtggggtgtccggggttcgaaccccgacccctgca 3294806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 5757867 - 5757924
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    |||||||||||||||||  |||||||||  | ||| ||||||||||||||| ||||||    
T  5757867 gagaaattcaccttaaatgtgaataagtgaggtgttcggggttcgaaccccaacccct 5757924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 7164793 - 7164736
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    |||||||||||||||||| ||||||||| || ||  |||||||||||| ||| |||||    
T  7164793 gagaaattcaccttaaaggtgaataagtggggtggtcggggttcgaactccggcccct 7164736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 9438398 - 9438341
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||| ||| || ||||||||||||||||||| |||||||||    
T  9438398 aattcaccttataaggtgaatgagtggggtgtccggggttcgaaccccaacccctgca 9438341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 12089193 - 12089136
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||| ||| ||||||||    
T  12089193 aattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgca 12089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 18244012 - 18244068
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| |||||||||||||||| | |||||| |||||||||||||| |||||    
T  18244012 aattcaccttataagatgaataagtagggtatccggg-ttcgaaccccgacctctgca 18244068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 22997414 - 22997381
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||| ||||||||||||||||||||||||||    
T  22997414 aagtagggtgtccggggttcgaaccccgacccct 22997381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 23790987 - 23791020
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||| ||||||||||||||||||||||||||    
T  23790987 aagtagggtgtccggggttcgaaccccgacccct 23791020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 25020527 - 25020584
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||| | ||||||||    
T  25020527 aattcaccttataaggtgaataagtggggtgtccggggttcgaacccaggcccctgca 25020584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 32057130 - 32057073
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| |||| || |||||||||||| ||||| |||||    
T  32057130 aattcaccttataagatgaataagtgggatctctggggttcgaacctcgaccactgca 32057073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 35190859 - 35190802
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||| |||||||||||| ||||||||||||    
T  35190859 aattcaccttataaggtgaataagtggggtgttcggggttcgaactccgacccctgca 35190802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 10373662 - 10373634
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  10373662 tgtccggggttcgaaccccgacccctgca 10373634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 10483536 - 10483564
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  10483536 tgtccggggttcgaaccccgacccctgca 10483564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 10517269 - 10517241
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  10517269 tgtccggggttcgaaccccgacccctgca 10517241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 16913900 - 16913928
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  16913900 tgtccggggttcgaaccccgacccctgca 16913928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 18904335 - 18904307
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  18904335 tgtccggggttcgaaccccgacccctgca 18904307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 21874235 - 21874303
Alignment:
Q  194 atgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||  | ||| |||| ||||||| ||  ||| |||||||||||| |||||||||||||||||    
T  21874235 atgaataagtgaggtgttcgggattcgaactcctgcccatgcacatattgtgcattatcccttaccaaa 21874303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 29284216 - 29284160
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    |||||||||| || ||  ||||||||| || ||||||||||||||||||||| ||||    
T  29284216 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccgatccct 29284160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 31935169 - 31935141
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  31935169 tgtccggggttcgaaccccgacccctgca 31935141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 47864762 - 47864649
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||     
T  47864762 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgcacatattgtg 47864666  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  47864665 cattatcccttaccaaa 47864649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 50381813 - 50381727
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||    
T  50381813 gagaaattcaccttaaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatatattgtgcattatcccttaccaaa 50381727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 31435497 - 31435580
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacc 259  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||||| ||||||||||||||    
T  31435497 gagaaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccaacccctacacatattgtgcattatcccttacc 31435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 33528174 - 33528287
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||||| || |||| ||||||||||||||  |||||||||| |||||     
T  33528174 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtg 33528270  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  33528271 cattatcccttaccaaa 33528287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 39739373 - 39739287
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  39739373 gagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaaccccaatccctgcacatattgtgcattatcccttaccaaa 39739287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 11483712 - 11483626
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||| | |||||||||||||| | |||||||||||||||||    
T  11483712 gagaaattcaccttaaagatgaataagtggggtgtccggagttcgaaccctggcccctgcacatattttgcattatcccttaccaaa 11483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 27471603 - 27471517
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  27471603 gagaaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgtacatattatgcattatcccttaccaaa 27471517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 29226425 - 29226339
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  29226425 gagaaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccggcccctgcacatattgtgtgttatcccttaccaaa 29226339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 46798708 - 46798595
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   ||||||  |||||||  ||||||||||||||||||| || ||||| ||||||||| |||| ||||||||||||||||     
T  46798708 ttttttggtcaagtagcct---agtggttagagaaatctaccttaaagatgaataagtggggtgtccagggttcgaatcccggcccctgcacatattgtg 46798612  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||| ||||||    
T  46798611 cattatccctcaccaaa 46798595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 9320928 - 9321041
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||| ||||||||||||   ||||||  |||||||||| ||| ||||||||||||| || ||| |||| |||||||||| ||||||||||| ||||||    
T  9320928 tttttttgtcaagtagcct---agtggttagagaaattcatctttaagatgaataagtggggtgttcgggtttcgaaccccaacccctgcacaaattgta 9321024  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||| ||||    
T  9321025 cattatcccttatcaaa 9321041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 22602172 - 22602285
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   ||||||||||||||||||||||||||||  |||||| ||| |||||||| || ||||| ||||||||||     
T  22602172 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtgcgatgtctgggattcgaacctcgtcccctacacatattgtg 22602268  T
Q  246 cattatcccttaccaaa 262  Q
    |||||| ||||||||||    
T  22602269 cattattccttaccaaa 22602285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 29645823 - 29645889
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  29645823 gagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatatt 29645889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 2259252 - 2259170
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||| |||||||||||||||||||||| |||| |||||| |||| ||| |||||||||||||||| |||||||||||||||||    
T  2259252 aaatttaccttaaagatgaataagtagg-tgtctggggtttgaactccggcccctgcacatattgtgcattatcccttaccaaa 2259170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 46247388 - 46247273
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtag---gatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    |||||||||||||||||||   ||||| | ||||||||||||||||||||||||||| ||   | |||| ||||||||||||||  |||||||||| |||    
T  46247388 ttttttggtcaagtagcct---agtgg-cagagaaattcaccttaaagatgaataagaagtggggtgtctggggttcgaaccccagcccctgcacaaatt 46247293  T
Q  243 gtacattatcccttaccaaa 262  Q
    || |||||||||||||||||    
T  46247292 gtgcattatcccttaccaaa 46247273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 25165543 - 25165453
Alignment:
Q  176 gagaaattcaccttaaa---gatgaataagtagga-tgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||   ||||||||||| ||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  25165543 gagaaattcaccttaaaaaagatgaataagtgggggtgtccggggttcgaaccccggtccctgcacatattgtgcattatcccttaccaaa 25165453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 55426243 - 55426127
Alignment:
Q  139 caatttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcaca 238  Q
    |||||| |||||||||||||||||||   |||||   ||||||||||||||||||||||    || || ||||||||||||||||| || ||| ||||||    
T  55426243 caattttttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatga----gtggggtgtccggggttcgaacctcggcccatgcaca 55426151  T
Q  239 tattgtacattatcccttaccaaa 262  Q
    |||||| |||||||| ||||||||    
T  55426150 tattgtgcattatcctttaccaaa 55426127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 27817064 - 27817149
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||||||||| | || |||||||| ||||||| ||| |||||||||| ||||| |||||||||||||||||    
T  27817064 gagaaattcaacttaaagatgaataaatggggtgtccggg-ttcgaactccggcccctgcacaaattgtgcattatcccttaccaaa 27817149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 32421444 - 32421363
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacca 260  Q
    ||||||| ||||||||||||||||| ||  || || |||||||||||||||||||||| ||||| | |||||||||||||||    
T  32421444 aaattcatcttaaagatgaataagtggggagttcgaggttcgaaccccgacccctgcatatattatgcattatcccttacca 32421363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 44062038 - 44062113
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatc 252  Q
    |||| ||||||||||||||||||||||| || |||| ||||||||||| ||| |||||||||||||||| |||||||    
T  44062038 gagacattcaccttaaagatgaataagtggggtgtc-ggggttcgaactccggcccctgcacatattgtgcattatc 44062113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 50688939 - 50688859
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctt 256  Q
    ||||||||||| |||||||||||||||| |||| |||||  ||||||||||||| ||||||| |||| | |||||||||||    
T  50688939 gagaaattcactttaaagatgaataagtgggatatccggaattcgaaccccgactcctgcacgtattatgcattatccctt 50688859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 36590454 - 36590403
Alignment:
Q  211 ccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  36590454 ccggggttcgaaccacggcccctgcacatattgtacattatcccttaccaaa 36590403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 45431724 - 45431641
Alignment:
Q  178 gaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||| |||||||||| | | |   ||||||||||||||||    
T  45431724 gaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccctgacccctgcataaaatacgcattatcccttaccaa 45431641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 985915 - 986001
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||| ||||||||||||| || |||||||| |||  |||||  |||||||||| ||||| |||||| ||||||||||    
T  985915 gagaaattcacctttaagatgaataagtggggtgtccgggattcagaccccagcccctgcacaaattgtgcattatgccttaccaaa 986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 1325328 - 1325414
Alignment:
Q  177 agaaattcaccttaaagatgaataagtagga-tgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||| ||||||||||||||| | ||  ||||||||||||||| ||||| ||||| | ||||||| |||||||||||||||||    
T  1325328 agaaattcatcttaaagatgaataaatgggggtgtccggggttcgaatcccgatccctgtatatattgtgcattatcccttaccaaa 1325414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 16141322 - 16141435
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   ||||||  || ||||| ||||| ||||||||||||| || |||| || |||||||||||  ||| || |||||||||     
T  16141322 ttttttggtcaagtagcct---agtggttagataaatttacctttaagatgaataagtggggtgtctggagttcgaaccccagcccttgtacatattgtg 16141418  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||| ||||    
T  16141419 cattatcccttatcaaa 16141435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 38668227 - 38668141
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||| ||| ||  ||| || |||||| ||| |||||| |||||||||||||||||    
T  38668227 gagaaattcaccttaaagatgaataagtggggtgtcagggatttcaactccaacccctacacgtattgtgcattatcccttaccaaa 38668141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 166886 - 166802
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||| |||||| |||||||||  | |||| ||||||||||||||| |||||||| | ||| | ||||||||||||||||    
T  166886 agaaattcactttaaaggtgaataagtgaggtgtctggggttcgaaccccggcccctgcataaattatgcattatcccttaccaa 166802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 260
Target Start/End: Original strand, 1102692 - 1102776
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacca 260  Q
    |||||||||||||||||| ||||||||| || |||||  ||||||||| ||| |||||||| | ||| | |||||||||||||||    
T  1102692 gagaaattcaccttaaaggtgaataagtggggtgtccatggttcgaactccgtcccctgcataaattatgcattatcccttacca 1102776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 4478376 - 4478424
Alignment:
Q  188 ttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  4478376 ttaaagatgaataagtgggatgtccgggattcgaaccccgacccctgca 4478424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 50271828 - 50271768
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||| || ||||||||    
T  50271828 gagaaattcaccttaaaggtgaataagtgggatgtacggggttcgaaccacggcccctgca 50271768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 30162760 - 30162670
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccg-----gggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| ||||||||||  | ||||||     |||||||||||||| ||| |||||||||||| |||||||||||||||||    
T  30162760 gagaaattcaccttaaa-atgaataagtgaggtgtccgtgcccgggttcgaaccccggcccttgcacatattgtgcattatcccttaccaaa 30162670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 50676854 - 50676948
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||  |||||||||||||||||| ||||||||| || ||| ||||||||||||||| |||||| || ||| | |  ||| |||||||||||    
T  50676854 tagtggttagagaaattcaccttaaaggtgaataagtggggtgttcggggttcgaaccccaacccctacatataatatgtattgtcccttaccaa 50676948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 27394606 - 27394522
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||| ||||||||| || |||||||||||| ||||||  |||||||| |||   | ||||||||||||||||    
T  27394606 gagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatata-aatgcattatcccttaccaa 27394522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 38414982 - 38414897
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||| ||||||||| || ||| | | |||| ||||| |||||||||| ||| | | ||||||||||||||||    
T  38414982 gagaaattcaccttaaaggtgaataagtggggtgttcagagttcaaaccctgacccctgcatataatatgcattatcccttaccaa 38414897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 48717513 - 48717452
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||| |||| || |||  |||||||||||||| |||||||||    
T  48717513 ggagaaattcaccttaaagatgaaaaagtggggtgtttggggttcgaacccctacccctgca 48717452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 49429559 - 49429510
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccc 225  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  49429559 gagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccc 49429510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 9489587 - 9489491
Alignment:
Q  165 cttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||| |||| |||||||||| ||||||| ||||  |||||| | ||| |||||||||||||| |||||||| | ||  | ||||||||||||||||    
T  9489587 cttagcggtcagagaaattcatcttaaaggtgaaatagtagggtatccagggttcgaaccccggcccctgcatacataatgcattatcccttaccaa 9489491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 24559487 - 24559428
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||||||||||||    
T  24559487 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgca 24559428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 7518035 - 7517953
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| || |||||| |||||| || ||| ||||||||||||| || | |||||||| ||||| || ||||||||||||||    
T  7518035 aattcacttttaagatggataagtggggtgttcggggttcgaaccgcggctcctgcacaaattgtgcaatatcccttaccaaa 7517953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 8258215 - 8258165
Alignment:
Q  212 cggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||| |||||||||||||||||||| ||||| || ||||||||    
T  8258215 cggggttcgaactccgacccctgcacatattgtgcattaaccattaccaaa 8258165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 54983704 - 54983766
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatat 241  Q
    ||||||||||| ||| ||||||| | || ||||||||||||||||||||||||||||| ||||    
T  54983704 aattcaccttataaggtgaataaatggggtgtccggggttcgaaccccgacccctgcatatat 54983766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 24537923 - 24537866
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  24537923 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 24537866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 28054729 - 28054810
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||| | |||||||||| | ||| | || |||||||||||||    
T  28054729 aattcaccttaaggataaataagtggggtgtctggggttcgaactctgacccctgcataaattatgcaatatcccttaccaa 28054810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 28065154 - 28065235
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||| | |||||||||| | ||| | || |||||||||||||    
T  28065154 aattcaccttaaggataaataagtggggtgtctggggttcgaactctgacccctgcataaattatgcaatatcccttaccaa 28065235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 31419681 - 31419596
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| || ||| ||||||||| || |||  ||||||||||||||  ||||| |||||||||| | || ||||||||||||    
T  31419681 agaaattcacttttaaggtgaataagtggggtgtttggggttcgaaccccagcccctacacatattgtgcgttgtcccttaccaaa 31419596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 32508793 - 32508850
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||| |||||||||||||||||||||||||    
T  32508793 aattcaccttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgca 32508850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 34225298 - 34225208
Alignment:
Q  174 cggagaaattcaccttaaagatgaataagtaggatgtc---cggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||| |||||||||  | ||||   ||||||| ||| |  | |||||||||||||||| |||||||||||||||||    
T  34225298 cggagaaattcaccttaaaggtgaataagtgaggtgtcgtccggggtttgaatctag-cccctgcacatattgtgcattatcccttaccaaa 34225208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 36331741 - 36331782
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  36331741 tgaataagtggggtgtccggggttcgaaccccgacccctgca 36331782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 38682257 - 38682314
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| |||||||||||| ||| |||||||| |||||| |||||||||||||    
T  38682257 aattcaccttataagatgaataaggagggtgtccgggattcgaatcccgacccctgca 38682314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 38869223 - 38869272
Alignment:
Q  212 cggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||||||||||  |||| | ||||||||||||||||    
T  38869223 cggggttcgaaccccgacccctgcatgtattatgcattatcccttaccaa 38869272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 42271012 - 42271069
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  42271012 aattcaccttataaggtgaataagtagggtgtccggagttcgaaccccggcccctgca 42271069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 43774281 - 43774224
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||| ||||||||||||||||||||||||    
T  43774281 aattcaccttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgca 43774224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 46328923 - 46328980
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  46328923 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 46328980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 49146164 - 49146123
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  49146164 tgaataagtggggtgtccggggttcgaaccccgacccctgca 49146123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 52030201 - 52030160
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  52030201 tgaataagtagggtgtccggggttcgaaccccggcccctgca 52030160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 40412366 - 40412306
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| |||||| ||||||||| ||||||||   ||||||||||||||| |||||    
T  40412366 gagaaattcactttaaaggtgaataagtgggatgtccaaagttcgaaccccgacctctgca 40412306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 9625081 - 9625022
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  9625081 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 9625022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 27183678 - 27183737
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  27183678 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 27183737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 33780363 - 33780316
Alignment:
Q  215 ggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||| ||||||| | ||||||| |||||||||||||||||    
T  33780363 ggttcgaaccccaacccctgtatatattgtgcattatcccttaccaaa 33780316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 36727462 - 36727513
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacc 230  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||||||||    
T  36727462 aattcaccttataagatgaataagtggggtgtccgaggttcgaaccccgacc 36727513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 36842242 - 36842203
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctg 234  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  36842242 tgaataagtgggatgtacggggttcgaaccccgacccctg 36842203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 45871087 - 45871040
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgcacatattgtacattatccct 255  Q
    ||||||||||||||||||||||||||||| ||| | |||| |||||||    
T  45871087 tgtccggggttcgaaccccgacccctgcatataatatacaatatccct 45871040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 13616073 - 13616127
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||| |||||||||    
T  13616073 aattcaccttataagatgaataagtggggtgtccgaggttcgaactccgacccct 13616127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 25883988 - 25884022
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgcacatatt 242  Q
    ||||||||||||||||||||||||||||| |||||    
T  25883988 tgtccggggttcgaaccccgacccctgcatatatt 25884022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 33830364 - 33830450
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||||| || |||| || |||| |||     |||||||| ||||||| ||||||| |||||||||    
T  33830364 gagaaattcaccttaaaaatgaataagtggggtgtctggagttcaaactagagcccctgcatatattgtgcattatctcttaccaaa 33830450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 54240670 - 54240636
Alignment:
Q  210 tccggggttcgaaccccgacccctgcacatattgt 244  Q
    |||| ||||||||||||||||||||||||||||||    
T  54240670 tccgaggttcgaaccccgacccctgcacatattgt 54240636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 2732759 - 2732702
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||  ||||||||    
T  2732759 aattcaccttataaggtgaataagtggggtgtccggggttcgaacccctgcccctgca 2732702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 3748600 - 3748649
Alignment:
Q  206 gatgtccggggttcgaaccccgacccctgcacatattgtacattatccct 255  Q
    ||||||||||||||||||||| ||||||||| ||| | |||| |||||||    
T  3748600 gatgtccggggttcgaaccccaacccctgcatataatatacaatatccct 3748649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 3784168 - 3784111
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctg 234  Q
    |||||||||| || || ||||| | || || |||||||||||||||||||||||||||    
T  3784168 agaaattcacttttaaaatgaaaaggtggggtgtccggggttcgaaccccgacccctg 3784111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 7239901 - 7239819
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| ||||||||||| |||||||| || ||| || ||||||||||    ||||| ||||||||||  | ||||||||||||||    
T  7239901 gagaaatccaccttaaagacgaataagtggggtgttcgaggttcgaacc----cccctacacatattgtgtaatatcccttaccaaa 7239819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 16277966 - 16278007
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| |||||||||| ||||||| |||||||||||||    
T  16277966 tgaataagtgggatgtccggagttcgaatcccgacccctgca 16278007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 23820725 - 23820668
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||| ||||||||||| ||| ||||||||    
T  23820725 aattcaccttataagatgaataagtggggtgtctggggttcgaactccggcccctgca 23820668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 24160543 - 24160584
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| |  |||||||||||||||||||||||||||||    
T  24160543 tgaataagtggagtgtccggggttcgaaccccgacccctgca 24160584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 27066690 - 27066649
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||| ||||||||||    
T  27066690 tgaataagtggggtgtccggggttcgaaccctgacccctgca 27066649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 33206853 - 33206796
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||  ||||||||    
T  33206853 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccagcccctgca 33206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 34407101 - 34407146
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| || |||| |||||||||||||| |||||||||    
T  34407101 aagatgaataagtggggtgtctggggttcgaaccccaacccctgca 34407146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 35483349 - 35483308
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||| ||||||||||||||||||||    
T  35483349 tgaataagtggggtgtccgggattcgaaccccgacccctgca 35483308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 36256678 - 36256735
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| |||||||||||| |||  | ||||||||||||||||||||||    
T  36256678 aattcaccttataaggtgaataagtagggtgtatgaggttcgaaccccgacccctgca 36256735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 37756409 - 37756490
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    |||||| |||| |||||| ||||||||| || |||  ||||||||||||||  |||||||| | ||| | ||||||||||||    
T  37756409 gagaaactcacgttaaaggtgaataagtggggtgtttggggttcgaaccccagcccctgcataaattatgcattatccctta 37756490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 43566795 - 43566852
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||| | ||||||||||||||||||||||    
T  43566795 aattcaccttataaggtgaataagtggggtgtctgaggttcgaaccccgacccctgca 43566852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 48347271 - 48347328
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| || |||||||||| || |||| | ||||||||||||||||||||||    
T  48347271 aattcaccttataaaatgaataagtggggtgtctgaggttcgaaccccgacccctgca 48347328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 48722319 - 48722286
Alignment:
Q  203 taggatgtccggggttcgaaccccgacccctgca 236  Q
    |||| |||||||||||||||||||||||||||||    
T  48722319 tagggtgtccggggttcgaaccccgacccctgca 48722286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 10959231 - 10959175
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| |||||    
T  10959231 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccct 10959175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 15085684 - 15085712
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  15085684 tgtccggggttcgaaccccgacccctgca 15085712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 29098762 - 29098734
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  29098762 tgtccggggttcgaaccccgacccctgca 29098734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 40963711 - 40963739
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  40963711 tgtccggggttcgaaccccgacccctgca 40963739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 42785972 - 42785936
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  42785972 aagtagggtgtccagggttcgaaccccgacccctgca 42785936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 46844963 - 46844999
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  46844963 aagtagggtgtccggggttcgaactccgacccctgca 46844999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 49983700 - 49983736
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  49983700 aagtagggtgtccggggttcgaaccccaacccctgca 49983736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 419845 - 419725
Alignment:
Q  139 caatttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcaca 238  Q
    |||||| |||||| ||||||||||||   |||||   |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  419845 caatttttttttttgtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcaca 419749  T
Q  239 tattgtacattatcccttaccaaa 262  Q
    |||||| |||||||||||||||||    
T  419748 tattgttcattatcccttaccaaa 419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 31250246 - 31250160
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  31250246 gagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 31250160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 38503253 - 38503339
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  38503253 gagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 38503339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 43227965 - 43227879
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  43227965 gagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 43227879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 17077457 - 17077374
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  17077457 aaattcacctttaagatgaataagtggggtgtccggggttcgaatcccgacccctgcacaaattgtgcattatcccttaccaaa 17077374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 15106873 - 15106969
Alignment:
Q  166 ttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||  |||||||| |  |||||||||||||||| || ||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  15106873 ttagtggttagagaaatttattttaaagatgaataagtggggtgtccggggttcgaaccccgacctctgcacaaattgtgcattatcccttaccaaa 15106969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 930934 - 931017
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacc 259  Q
    |||||||||||||| ||||||||||||| ||||||| | |||||||||||| ||||||||||||||||| |||| |||||||||    
T  930934 gagaaattcacctttaagatgaataagtgggatgtctgaggttcgaaccccaacccctgcacatattgtgcattgtcccttacc 931017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 5039779 - 5039694
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||| ||||||||||||||||||| || ||||||  |||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  5039779 gagaaatttaccttaaagatgaataagtggggtgtccgaagttcgaaccccggcccttgcacatattgtacattat-ccttaccaaa 5039694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 33545356 - 33545460
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||||  || |||||| ||||| ||| ||||||||||||||||||||     
T  33545356 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataaggggg-tgtccgaggttcaaactccgacccctgcacatattgtg 33545451  T
Q  246 cattatccc 254  Q
    |||||||||    
T  33545452 cattatccc 33545460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 34729570 - 34729486
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||| ||||||||| || |||||||| |||||||||||||||||||| ||| | | ||||||||||||||||    
T  34729570 gagaaattcaccttaaaggtgaataagtggggtgtccggg-ttcgaaccccgacccctgcatataatatgcattatcccttaccaa 34729486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 15470617 - 15470703
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||| | || |||| |||||||||| | |  ||| |||||||||||| |||||||||||||||||    
T  15470617 gagaaattcaccttaaagatgaataaatggggtgtctggggttcgaatctcagcccttgcacatattgtgcattatcccttaccaaa 15470703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 41836139 - 41836073
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    |||||||||||||||||||||||||| | | |||||||  |||||||||||||||||||||||||||    
T  41836139 gagaaattcaccttaaagatgaataaatggaatgtccgaagttcgaaccccgacccctgcacatatt 41836073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 20191573 - 20191456
Alignment:
Q  140 aatttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacat 239  Q
    ||||| |||||| ||||||||| ||   ||||| | |||||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||| ||    
T  20191573 aatttttttttttgtcaagtagtct---agtggccagagaaatttaccttaaaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatat 20191477  T
Q  240 attgtacattatcccttaccaa 261  Q
    |   | ||||||||||||||||    
T  20191476 a-aatgcattatcccttaccaa 20191456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 1572209 - 1572123
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||| ||||||||||||| ||  ||||||||||||||||||  |||||||||| | ||| ||| |||||||| ||||    
T  1572209 gagaaattcacctttaagatgaataagtggggagtccggggttcgaaccccagcccctgcacaaaatgtgcataatcccttaacaaa 1572123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 42209015 - 42208934
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttac 258  Q
    ||||||||||||||||||||||||||||  | ||||||| ||||||||| ||  |||||||||||||||  ||||||||||||    
T  42209015 gagaaattcaccttaaagatgaataagtgaggtgtccggagttcgaacctcg-gccctgcacatattgtgtattatcccttac 42208934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 87888 - 87804
Alignment:
Q  178 gaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||| |||||||  | || |||| || |||||||| ||||||| |||| ||||||| |||||||||||||||||    
T  87888 gaaattcaccttaaaaatgaatagttggggtgtctggagttcgaactccgacccttgcatatattgtgcattatcccttaccaaa 87804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 3294181 - 3294101
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    ||||||||||||||||||||||||| | || |||||||  ||||||||||| |||||||| | ||| | ||||||||||||    
T  3294181 agaaattcaccttaaagatgaataaatgggttgtccggaattcgaaccccggcccctgcataaattatgcattatccctta 3294101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 4395847 - 4395923
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatc 252  Q
    |||||||||||||||||||||||||| | || |||| ||||||||||| ||| |||||||||| ||| | |||||||    
T  4395847 gagaaattcaccttaaagatgaataaatggggtgtcaggggttcgaactccggcccctgcacacattatgcattatc 4395923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 12375443 - 12375494
Alignment:
Q  211 ccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  12375443 ccggggttcgaaccccggcccctgcacatattgtgcattatccattaccaaa 12375494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 18175307 - 18175249
Alignment:
Q  177 agaaattcacct--taaagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||||  ||||||||||||||| ||||||| |||||||||||||||||||||    
T  18175307 agaaattcacctcataaagatgaataagtgggatgtctggggttcgaaccccgacccct 18175249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 1984189 - 1984271
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||||||| |||||||  ||||||||| | |||||||| |  | ||||| |||||||||||||||||    
T  1984189 aattcacctttaagatgaataagtgggatgtctagggttcgaaactcgacccctacgaaaattgtgcattatcccttaccaaa 1984271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 9628215 - 9628130
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||| |||||||||||| ||||||| |||| |||| | ||||||||||||||  |||||| ||||| | ||||||| |||||||||    
T  9628215 agaatttcaccttaaaggtgaataaatagggtgtctgaggttcgaaccccgaatcctgcatatattatgcattatctcttaccaaa 9628130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 4674812 - 4674871
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||||||||||||    
T  4674812 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgca 4674871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 36045131 - 36045190
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||||||||||||    
T  36045131 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgca 36045190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 42643838 - 42643885
Alignment:
Q  215 ggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||    
T  42643838 ggttcgaacttcgacccctgcacatattgtgcattatcccttaccaaa 42643885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 962387 - 962327
Alignment:
Q  179 aaattcaccttaaagatga---ataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||   ||||||||| ||||||| ||||||||||| |||||||||    
T  962387 aaattcaccttaaagatgatgaataagtagggtgtccggagttcgaaccccaacccctgca 962327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 3867723 - 3867815
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    |||||| ||||||||||   ||||||||||||||||||||| ||||| || ||||||| || |||  | | |||||||||||||||||||| |||||    
T  3867723 tttttttgtcaagtagc---ttagtggtcggagaaattcactttaaa-ataaataagtggggtgtttgagattcgaaccccgacccctgcatatatt 3867815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 4985843 - 4985801
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  4985843 aagatgaataagtagggtgtccagggttcgaaccccgacccct 4985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 29561732 - 29561686
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgcac 237  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  29561732 aagatgaataagtgggatgtctggggttcgaaccccggcccctgcac 29561686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 8015931 - 8015874
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  8015931 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 8015874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 29530841 - 29530796
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgcacatattgtacattatcc 253  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||||    
T  29530841 tgtccggggttcgaaccccggcccctgcacaaattgtgcattatcc 29530796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 42801452 - 42801497
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||  | |||||||||||||||||||||||||||||    
T  42801452 aagatgaataagtgaggtgtccggggttcgaaccccgacccctgca 42801497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 18872615 - 18872560
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||| | ||||||||| || ||| |||||||||||||||||||||||||    
T  18872615 aattcaccttaagg-tgaataagtggggtgttcggggttcgaaccccgacccctgca 18872560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 35168632 - 35168676
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaacc 224  Q
    |||||||||||||| ||||||||| || |||||||||||||||||    
T  35168632 aattcaccttaaaggtgaataagtggggtgtccggggttcgaacc 35168676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 1463969 - 1463910
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  1463969 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 1463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 38436017 - 38435970
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaacc 224  Q
    ||||||||||||||||| |||||||||||| |||| | ||||||||||    
T  38436017 agaaattcaccttaaaggtgaataagtagggtgtctgtggttcgaacc 38435970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 42902061 - 42902127
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattg 243  Q
    |||||||| ||||||||||||||||||| || |||| ||||||||||| |  || |||||||||||||    
T  42902061 gagaaatttaccttaaagatgaataagt-ggttgtcaggggttcgaactctaactcctgcacatattg 42902127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 5263268 - 5263182
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||||||||| |  | ||||  ||||||||||  |  ||||| |||||||||| |||||||| ||||||||    
T  5263268 gagaaattcagcttaaagatgaataaatgtggtgtctcgggttcgaacatcaccccctacacatattgtgcattatccattaccaaa 5263182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 15680897 - 15680943
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaa 222  Q
    |||||||||||||||||| ||||||||| || |||||| ||||||||    
T  15680897 gagaaattcaccttaaaggtgaataagtggggtgtccgaggttcgaa 15680943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 1244726 - 1244783
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||| ||||||||||||| ||||||||||    
T  1244726 aattcaccttataaggtgaataagtggggtgtctggggttcgaaccctgacccctgca 1244783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 2029127 - 2029184
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||| ||||||||||| |||||||||||||    
T  2029127 aattcaccttataaggtgaataagtggggtgttcggggttcgaatcccgacccctgca 2029184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 6614049 - 6614094
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| || |||||| ||||||||||||| ||||||||    
T  6614049 aagatgaataagtggggtgtccgaggttcgaaccccggcccctgca 6614094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 10943796 - 10943755
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||| ||||||||    
T  10943796 tgaataagtggggtgtccggggttcgaaccccggcccctgca 10943755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 19059003 - 19059060
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||||| |||||||||||||| ||||||||    
T  19059003 aattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggcccctgca 19059060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 23925639 - 23925582
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || | |||||| ||||||||| ||||||||||    
T  23925639 aattcaccttataagatgaataagtggggtatccgggattcgaacccagacccctgca 23925582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 31556898 - 31556857
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||| ||||||||||||    
T  31556898 tgaataagtggggtgtccggggttcgaactccgacccctgca 31556857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 32158413 - 32158470
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||| |||||||||||||||| ||||||||    
T  32158413 aattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgca 32158470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 36226134 - 36226191
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||| | |  ||||||||||||||||||||||| |||||    
T  36226134 aattcaccttataagatgaataaatggagtgtccggggttcgaaccccgacctctgca 36226191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 37304014 - 37303973
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || ||||| |||||||||||||||||||||||    
T  37304014 tgaataagtggggtgtccagggttcgaaccccgacccctgca 37303973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 38618680 - 38618737
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||| ||||    
T  38618680 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccttgca 38618737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 3741024 - 3740996
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  3741024 tgtccggggttcgaaccccgacccctgca 3740996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 6558879 - 6558843
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  6558879 aagtagggtgtccggagttcgaaccccgacccctgca 6558843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 8571871 - 8571835
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  8571871 aagtagggtgttcggggttcgaaccccgacccctgca 8571835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 15715865 - 15715805
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccct 255  Q
    |||| ||||||| | ||||||||||||||| ||||||||||| ||||| | |||| |||||    
T  15715865 tgaagaagtagggtatccggggttcgaacctcgacccctgcatatattatgcattgtccct 15715805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 18050249 - 18050221
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  18050249 tgtccggggttcgaaccccgacccctgca 18050221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 26902691 - 26902663
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  26902691 tgtccggggttcgaaccccgacccctgca 26902663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 29331339 - 29331287
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgaccc 231  Q
    ||||||||||| ||||||||||||| |  ||| ||||||||||||||||||||    
T  29331339 aattcaccttataagatgaataagtggagtgttcggggttcgaaccccgaccc 29331287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 31991798 - 31991842
Alignment:
Q  217 ttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||||| ||||  | ||||||||||||||||    
T  31991798 ttcgaaccccgacccctgcatatataatgcattatcccttaccaa 31991842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 14262717 - 14262803
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  14262717 gagaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacccctgcatatattgtgcattatcccttatcaaa 14262803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 24134620 - 24134706
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  24134620 gagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 24134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 8893968 - 8893873
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| ||||||||||||||||||||||||||||| || |||  |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  8893968 tagtggttggagaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctgtacatattgtgcattatcccttaccaaa 8893873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 50011606 - 50011520
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  50011606 gagaaattcaccttaaagatgaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaa 50011520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 49620097 - 49619985
Alignment:
Q  147 tttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtac 246  Q
    ||||||||||||||||||   |||||   ||||||||||| |||||||||||||||| || ||||||||||  ||||||||||||||||||||||||| |    
T  49620097 tttttggtcaagtagcct---agtggctagagaaattcactttaaagatgaataagtggggtgtccggggtctgaaccccgacccctgcacatattgtgc 49620001  T
Q  247 attatcccttaccaaa 262  Q
    ||||||||||||||||    
T  49620000 attatcccttaccaaa 49619985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 3347699 - 3347785
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||||||||| |||| |||||||||||||||||| ||||||||    
T  3347699 gagaaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccgactcctgaacatattgtacattatccattaccaaa 3347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 43109207 - 43109320
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||| |  | |||||||||||||||||||| |||||||||||||| |     
T  43109207 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataaatgaggtgtccggggttcgaaccccggcccctgcacatattttg 43109303  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  43109304 cattatcccttaccaaa 43109320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 34702310 - 34702395
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||| |||||||||||||||||  | |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  34702310 agaaattcatcttaaagatgaataagtgaggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 34702395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 10123049 - 10123134
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  10123049 gagaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctacacatattgta-attatcccttaccaaa 10123134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 7438719 - 7438634
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||    
T  7438719 agaaattcacctttaagatgaataagtggggtgtccggagttcgaaccccgacccctacacaaattgtgcattatcccttaccaaa 7438634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 12148569 - 12148650
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    |||||||||||||||||||||||||||| || |||| |||||| |||| |||||||||||||||||||||||||||| ||||    
T  12148569 gagaaattcaccttaaagatgaataagtggggtgtctggggtttgaactccgacccctgcacatattgtacattatcgctta 12148650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 19424145 - 19424059
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||| | | |||||||||||| ||||    
T  19424145 gagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttatcaaa 19424059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 25031493 - 25031579
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||  ||||||||||| |||||||||||||| | ||||||| |||||||||    
T  25031493 gagaaattcaccttaaagatgaataagtggggtgtccggaattcgaaccccggcccctgcacatattatgcattatctcttaccaaa 25031579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 50065109 - 50065023
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||| | |||||||||||  ||||||||||||||| |||||||||||| ||||    
T  50065109 gagaaattcaccttaaagatgaataagtggggtgtccgagattcgaaccccggtccctgcacatattgtgcattatcccttatcaaa 50065023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 48497183 - 48497295
Alignment:
Q  147 tttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtac 246  Q
    ||||||||||||||||||   |||||   |||||||| ||||||||||||||||| | |  |||||||| ||||||| ||| |||||||||||||||| |    
T  48497183 tttttggtcaagtagcct---agtggctagagaaatttaccttaaagatgaataaatggagtgtccgggattcgaactccggcccctgcacatattgtgc 48497279  T
Q  247 attatcccttaccaaa 262  Q
    ||||||||||||||||    
T  48497280 attatcccttaccaaa 48497295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 47651970 - 47651885
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||||| |||||||  || ||||||||||  |||||||||||||||| |||||||||||||||||    
T  47651970 gagaaattcaccttaaa-atgaataagtgggatgtctaggattcgaaccccagcccctgcacatattgtgcattatcccttaccaaa 47651885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 52164367 - 52164453
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| || ||||||| || |||||||  |||||||||||| ||||||||||||||| ||||||| |||||||||    
T  52164367 gagaaattcaccttaaaaattaataagtggggtgtccggaattcgaaccccgatccctgcacatattgtgcattatctcttaccaaa 52164453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 25800298 - 25800412
Alignment:
Q  142 tttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatat 241  Q
    |||||||||||||||||||||   ||| ||||   ||||||||||||| ||||||||||||| || ||||||||||| ||||||||  |||| || | ||    
T  25800298 tttcttttttggtcaagtagc---ttaatggttaaagaaattcacctttaagatgaataagtggggtgtccggggttggaaccccggaccctacataaat 25800394  T
Q  242 tgtacattatcccttacc 259  Q
    ||| ||||||||||||||    
T  25800395 tgtgcattatcccttacc 25800412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 262
Target Start/End: Complemental strand, 40061573 - 40061456
Alignment:
Q  141 atttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacata 240  Q
    |||||||||||| |||||||||||   |||||   ||||||| |||||||||||||||||||| || ||||||| |||||||||||  |||||  |||||    
T  40061573 atttcttttttg-tcaagtagcct---agtggctagagaaatccaccttaaagatgaataagtggggtgtccggagttcgaaccccagcccctatacata 40061478  T
Q  241 ttgtacattatcccttaccaaa 262  Q
    |||| || ||||||||||||||    
T  40061477 ttgtgcactatcccttaccaaa 40061456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 4684177 - 4684259
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||| | || | ||||   ||||||||||||||||| || |||||||||||||||||||||||||    
T  4684177 aattcaccttaaagatgaataaatggggtatccgaacttcgaaccccgacccctacatatattgtacattatcccttaccaaa 4684259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 15417813 - 15417899
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||||||||||| || |||||| | ||||||||||  ||||| |||||||||| |||||||| ||||||||    
T  15417813 gagaaattcatcttaaagatgaataagtggggtgtccgagcttcgaaccccagcccctacacatattgtgcattatcctttaccaaa 15417899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 30735954 - 30735841
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||| ||||||||||||   ||||||  ||||||||||||||  ||||||||||||  | ||||| |||||| ||| ||| |||||||||| |||||     
T  30735954 tttttttgtcaagtagcct---agtggttagagaaattcacctttgagatgaataagtgtggtgtccagggttcaaactccggcccctgcacaaattgtg 30735858  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  30735857 cattatcccttaccaaa 30735841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 42937225 - 42937311
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||| || | |||| |  |||||||| || ||||||||||||||||| |||||| ||||||||||    
T  42937225 gagaaattcaccttaaagatgaataaataaggtgtctgaagttcgaactccaacccctgcacatattgtgcattattccttaccaaa 42937311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 10790490 - 10790566
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcc 253  Q
    ||||||||||||||||| | |||||||||| |||||||||||| |||||| ||||||||| ||| | ||||||||||    
T  10790490 agaaattcaccttaaaggtaaataagtagggtgtccggggttcaaaccccaacccctgcatataatatacattatcc 10790566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 27054795 - 27054703
Alignment:
Q  176 gagaaattcaccttaaagatgaataagt-agg-----atgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| |||     ||| | ||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  27054795 gagaaattcaccttaaagatgaataagtgaggtgcctatgccgggggttcgaaccccggcccctgcagatattgtgcattatcccttaccaaa 27054703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 16985931 - 16985994
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacat 239  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||| | ||||||||||||    
T  16985931 gagaaattcaccttaaagatgaataagttaggtgtccggggttcgaacctcaacccctgcacat 16985994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 50302847 - 50302933
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaacccc-gacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||||||||||  ||| | ||||||||||||| | || ||||||||||| | |||||||||||||||||    
T  50302847 gagaaattcaccttaaagatgaataagtagagtgt-cagggttcgaaccccagccctctgcacatattatgcattatcccttaccaaa 50302933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 2017681 - 2017766
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| ||||| |||| || |||||||| ||||||||||  ||  |||||||||||| |||||||||||||||||    
T  2017681 gagaaattcaccttaaa-atgaacaagtggggtgtccgggattcgaaccccagcctatgcacatattgtgcattatcccttaccaaa 2017766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 12973275 - 12973360
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| ||||||||||||||||||| || |||| || ||| ||| | || |||||||| ||||||| |||||||||||||||||    
T  12973275 agaaatttaccttaaagatgaataagtggggtgtcaggagtttgaatctcggcccctgcatatattgtgcattatcccttaccaaa 12973360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 29936677 - 29936753
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatc 252  Q
    ||||||||||| || ||||||||||||| || ||||||| |||||||| |||||||||||||| || || |||||||    
T  29936677 gagaaattcacttttaagatgaataagtggggtgtccggagttcgaactccgacccctgcacaaatcgtgcattatc 29936753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 4126995 - 4126912
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||| | || ||||||| |||| |||  || || ||||| ||||||| |||||||||||||||||    
T  4126995 aaattcaccttaaagatgaataaatggggtgtccggtgttcaaacatcggcctctgcatatattgtgcattatcccttaccaaa 4126912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 29491567 - 29491509
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| |||||| ||||||||| || |||||||||||||||||||||||||||||    
T  29491567 agaaattcactttaaag-tgaataagtggggtgtccggggttcgaaccccgacccctgca 29491509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 47428892 - 47428975
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacca 260  Q
    |||||||||| |||||||||||||||| || |||  ||||||||||||||  ||| ||||||||||||  | ||||||||||||    
T  47428892 agaaattcactttaaagatgaataagtggggtgtttggggttcgaaccccagcccatgcacatattgtgtactatcccttacca 47428975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 22386264 - 22386318
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||| |||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  22386264 tgtctggggttcgaaccccaacccctgcacatattgtgcataatcccttaccaaa 22386318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 47683759 - 47683667
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||  |||||||||| |||||| |||||||| | |||| |||||| ||||||| ||| || ||||||||||||| ||||||||||||||||    
T  47683759 tagtggttagagaaattcatcttaaacatgaataact-ggatatccggg-ttcgaactccggcctctgcacatattgtgcattatcccttaccaa 47683667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 11405552 - 11405495
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||    
T  11405552 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgca 11405495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 24253639 - 24253720
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    |||||||||| |||||||  ||||||||| |||||| | |||||||| ||||||||||||| | ||| | ||||||||||||    
T  24253639 gagaaattcatcttaaaggcgaataagtaagatgtctgaggttcgaatcccgacccctgcataaattatgcattatccctta 24253720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 29332383 - 29332323
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||| ||||||||| || |||||||||||| ||||||| ||| ||||    
T  29332383 gagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccggcccatgca 29332323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 42946463 - 42946543
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctt 256  Q
    |||||||||||||| ||| ||||||||| || |||||||||||| ||||||  |||||||| ||| | | |||||||||||    
T  42946463 gagaaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatataatatgcattatccctt 42946543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 49239843 - 49239922
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||| ||||||||||||||||||| || |||||||||||       |||||||| |||||||||  |||||||||||||||||    
T  49239843 gagaaatttaccttaaagatgaataagtggggtgtccggggtt-------cgacccctacacatattgctcattatcccttaccaaa 49239922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 8310773 - 8310668
Alignment:
Q  152 ggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattat 251  Q
    |||||||||||||   || ||| |||||||||||||||||||   |||| || || | |||||||||||||||| |||||||||| ||||  ||||||||    
T  8310773 ggtcaagtagcct---agcggttggagaaattcaccttaaagtaaaata-gtggggtatccggggttcgaaccctgacccctgcatatataatacattat 8310678  T
Q  252 cccttaccaa 261  Q
    | ||||||||    
T  8310677 ctcttaccaa 8310668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 35309822 - 35309763
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||||||||||||||||| || ||| |||||||||| | || |||||||||    
T  35309822 agaaattcaccttaaagatgaataagtggggtgttcggggttcgacctccaacccctgca 35309763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 15774311 - 15774365
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||    
T  15774311 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccct 15774365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 9527522 - 9527465
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || ||||| |||||| ||||||||||||||||    
T  9527522 aattcaccttataagatgaataagtggggtgtccagggttcaaaccccgacccctgca 9527465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 9768824 - 9768865
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  9768824 tgaataagtggggtgtccggggttcgaaccccgacccctgca 9768865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 11238039 - 11238084
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||    
T  11238039 aagatgaataagtggggtgtccgggattcgaaccccgacccctgca 11238084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 15368901 - 15368844
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| || |||||||||| || |||||||||||||||||||| ||||||||    
T  15368901 aattcaccttataaaatgaataagtggggtgtccggggttcgaaccccggcccctgca 15368844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 32635239 - 32635174
Alignment:
Q  177 agaaattcacct-taaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatat 241  Q
    |||||||||||| | ||| ||||||||| || ||||||||||||||||||| ||||||||| ||||    
T  32635239 agaaattcacctcttaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatatat 32635174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 44583686 - 44583629
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    |||||||||||||||||| |||||| || |  ||||||| ||||||||||||||||||    
T  44583686 gagaaattcaccttaaaggtgaataggtggagtgtccggagttcgaaccccgacccct 44583629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 52720792 - 52720703
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctt 256  Q
    |||||||  ||||||||||| ||||||||||||||||  | |||| ||||||||||||||   |||| |||| ||| | |||||||||||    
T  52720792 tagtggttagagaaattcactttaaagatgaataagtgtggtgtctggggttcgaaccccagtccctacacacattatgcattatccctt 52720703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 35527334 - 35527417
Alignment:
Q  178 gaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| ||||| |||| ||||||| |  |||  ||||||| ||| ||||||||| |||||||||| |||||||||||||||||    
T  35527334 gaaattctccttatagataaataagtggagtgtttggggttcaaactccgacccct-cacatattgtgcattatcccttaccaaa 35527417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 17350159 - 17350100
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  17350159 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 17350100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 23368731 - 23368814
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||| ||  ||||||||| || ||||||||||||||||  ||  ||||||||| | ||| |||||||||||| ||||    
T  23368731 aaattcacctttaatgtgaataagtggggtgtccggggttcgaacatcggtccctgcacaaaatgtgcattatcccttatcaaa 23368814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 42367801 - 42367754
Alignment:
Q  189 taaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||||| || |||||||| ||||||||||| ||||||||    
T  42367801 taaagatgaataagtgggttgtccgggattcgaaccccggcccctgca 42367754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 52833103 - 52833162
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||| | ||||||||||||||||||||||| ||||||||    
T  52833103 agaaattcacttttaaagtgaataaatgggatgtccggggttcgaaccccggcccctgca 52833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 17916766 - 17916720
Alignment:
Q  216 gttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||||    
T  17916766 gttcgaaccccgacccctgcatatataatacattatcctttaccaaa 17916720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 30325039 - 30325124
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||||||||| |||| ||| | | |||||| || | |||||| |||||||| | |||||||||||| ||||    
T  30325039 gagaaattcatcttaaagatgaataaatagggtgttc-gagttcgagcctcaacccctacacatattatgcattatcccttatcaaa 30325124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 49916536 - 49916482
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||| || |||||||| | ||||||||||| |||||||||||||||||    
T  49916536 aattcaccttataatatgaataaatgggatgtccgggattcgaaccccgacccct 49916482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 2350372 - 2350421
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaacccc 226  Q
    |||||||||| |||||| ||||||||| || ||| |||||||||||||||    
T  2350372 agaaattcactttaaaggtgaataagtggggtgttcggggttcgaacccc 2350421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 4429481 - 4429538
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| | |||| | ||||||||||||| |||||||||    
T  4429481 aattcaccttataagatgaataagtggaatgttcagggttcgaaccccaacccctgca 4429538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 17871079 - 17871128
Alignment:
Q  179 aaattcaccttaaa-gatgaataagtaggatgtccggggttcgaaccccg 227  Q
    |||||||||||| | |||||||||||||| ||| ||||||||||||||||    
T  17871079 aaattcaccttacatgatgaataagtagggtgttcggggttcgaaccccg 17871128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 22779322 - 22779237
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||||||||  |||||| ||||||||| || |||  ||||||||||||||||| |||| | | | | | ||||||||||||||||    
T  22779322 gagaaattcattttaaaggtgaataagtggggtgtttggggttcgaaccccgactcctgtataaaatatgcattatcccttaccaa 22779237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 262
Target Start/End: Complemental strand, 25421964 - 25421867
Alignment:
Q  166 ttagtggtcggagaaattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||  ||||||||||||||  ||| ||||||||| |  |||| |||||| |||||||  ||||| |||| ||||| |||| ||||||||||||    
T  25421964 ttagtggttagagaaattcaccttttaaggtgaataagtggagtgtctggggtttgaaccccagcccctacacaaattgtgcattgtcccttaccaaa 25421867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 35195607 - 35195688
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    |||||||| ||||||||| ||||||||| |  ||| |||||||||||||| |  ||||||| ||| | | ||||||||||||    
T  35195607 gagaaatttaccttaaaggtgaataagtggagtgtacggggttcgaaccctggtccctgcatataatatgcattatccctta 35195688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 37203269 - 37203236
Alignment:
Q  194 atgaataagtaggatgtccggggttcgaaccccg 227  Q
    ||||||||||||| ||||||||||||||||||||    
T  37203269 atgaataagtagggtgtccggggttcgaaccccg 37203236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 37733851 - 37733794
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| || |||||    
T  37733851 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgtccactgca 37733794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 41182854 - 41182813
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||| ||||||||||||||||    
T  41182854 tgaataagtggggtgtccggggttcaaaccccgacccctgca 41182813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 49251410 - 49251451
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  49251410 tgaataagtggggtgtctggggttcgaaccccgacccctgca 49251451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 50199491 - 50199532
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||| ||||||||    
T  50199491 tgaataagtggggtgtccggggttcgaaccccggcccctgca 50199532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 10632764 - 10632736
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  10632764 tgtccggggttcgaaccccgacccctgca 10632736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 23234029 - 23233993
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  23234029 aagtagggtgtctggggttcgaaccccgacccctgca 23233993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 29917568 - 29917632
Alignment:
Q  192 agatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctt 256  Q
    ||||||||||||  | |||| |||||||||||||| | ||||||||| |||||  ||||||||||    
T  29917568 agatgaataagtgaggtgtctggggttcgaaccccaatccctgcacaaattgtgtattatccctt 29917632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 36310502 - 36310550
Alignment:
Q  188 ttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||| ||||||    
T  36310502 ttaaatatgaagaagtaggatgttcggggttcgatccccgactcctgca 36310550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 37239238 - 37239282
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaac 223  Q
    ||||||| ||| |||||||||||| ||||||||||| ||||||||    
T  37239238 aaattcatctttaagatgaataagcaggatgtccggagttcgaac 37239282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 42490410 - 42490438
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  42490410 tgtccggggttcgaaccccgacccctgca 42490438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 8e-30; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 41454823 - 41454909
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  41454823 gagaaattcacattaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 41454909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 41845426 - 41845511
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  41845426 agaaattcaccttaaagatgaataaatagggtgttcggggttcgaaccccgatccctgcacatattgtgcattatcccttaccaaa 41845511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 1032669 - 1032583
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  1032669 gagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaa 1032583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 4259958 - 4259872
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| ||  |||||||||| |||||||| |||||||||||||||| |||||||||||||||||    
T  4259958 gagaaattcaccttaaagatgaataagtggggagtccggggttggaaccccggcccctgcacatattgtgcattatcccttaccaaa 4259872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 5904370 - 5904456
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||  ||||||||    
T  5904370 gagaaattcatcttaaagatgaataagtgggatgtccggggttcgaaccccgtcccctgcacatattgtgcattatcttttaccaaa 5904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 38289231 - 38289317
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||  | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  38289231 gagaaattcaccttaaagatgaataagtggggtgtttgaggttcgaaccccgacccctgcacatattgtgcattatcccttaccaaa 38289317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 279993 - 280078
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||| | || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  279993 gagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccct-acccctgcacatattgtacattatcccttaccaaa 280078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 635859 - 635774
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||| | || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  635859 gagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccct-acccctgcacatattgtacattatcccttaccaaa 635774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 821662 - 821577
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||| | || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  821662 gagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccct-acccctgcacatattgtacattatcccttaccaaa 821577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 39104705 - 39104620
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| |||||||||||||||||||| || |||||||||||||||||||| || ||||||||||||| |||||||||||||||||    
T  39104705 gagaaatccaccttaaagatgaataagtggg-tgtccggggttcgaaccccggccgctgcacatattgtgcattatcccttaccaaa 39104620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 19733038 - 19733151
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||| ||||||||||   ||||||||  |||||||||||||||||||||||||| |  | ||| |||| |||||||||||||||||||| ||||| |     
T  19733038 tttttttgtcaagtagc---ttagtggttagagaaattcaccttaaagatgaataatttaggtgttcgggattcgaaccccgacccctgcatatattatg 19733134  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  19733135 cattatcccttaccaaa 19733151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 16973103 - 16973035
Alignment:
Q  194 atgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||||    
T  16973103 atgaataagtaggatgtccggagttcgaacaccgacccctgcacatattgtgcattatcccttaacaaa 16973035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 43456640 - 43456734
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||| | |||||| |||||||||| |||||||||| || |||||||||||||||||||||||| | || ||||||| |||||||||||||||||    
T  43456640 tagtggacagagaaaatcaccttaaa-atgaataagtggggtgtccggggttcgaaccccgacccttacatatattgtgcattatcccttaccaaa 43456734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 34037917 - 34038030
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||| ||   ||||||  || |||||||| |||||||||||||||| ||||||| ||| ||||||| ||| ||||||||||||||||     
T  34037917 ttttttggtcaagtagtct---agtggttagaaaaattcactttaaagatgaataagtgggatgtctgggattcgaactccgccccctgcacatattgtg 34038013  T
Q  246 cattatcccttaccaaa 262  Q
     ||||||||||| ||||    
T  34038014 tattatcccttatcaaa 34038030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 43413855 - 43413964
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   |||||||||||||||||||||||||||| || |||  ||| ||||||||||  |||||||||| |||||     
T  43413855 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtggggtgtttgggattcgaaccccagcccctgcacaaattgtg 43413951  T
Q  246 cattatcccttac 258  Q
    |||||||||||||    
T  43413952 cattatcccttac 43413964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 19957317 - 19957402
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| || |||||||| ||| | | ||||||||||||||||    
T  19957317 gagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatcccttaccaa 19957402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 36103927 - 36104004
Alignment:
Q  185 accttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||| || |||  ||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  36103927 accttaaagatgaataagtggggtgtttggggttcgaaccccggcccctgcacatattgtgcattatcctttaccaaa 36104004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 3311536 - 3311453
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| ||| ||||||||||||| || |||||||||||||||||| || ||||||| | ||||||||||||||||| |||||    
T  3311536 aaattcatctttaagatgaataagtggggtgtccggggttcgaaccctgatccctgcataaattgtacattatcccttgccaaa 3311453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 1360104 - 1360216
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||| ||||||||||||   ||||||  ||||||||||| ||||| |||||||||| || |||||||||||||||||||  ||||| ||||||||||     
T  1360104 tttttttgtcaagtagcct---agtggttagagaaattcactttaaa-atgaataagtggggtgtccggggttcgaaccccagcccctacacatattgtg 1360199  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||| || |||||    
T  1360200 cattatcctttgccaaa 1360216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 38064076 - 38063990
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||| ||||||| | ||||   ||||||||| ||||| |||||||||||||||||    
T  38064076 gagaaattcaccttaaagatgaataagtggggtgtctggggttcaacccccagtccctgcacaaattgtgcattatcccttaccaaa 38063990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 38544911 - 38545006
Alignment:
Q  166 ttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||  ||||||| |||||||||||| ||||||| || ||| |||| ||||||||| || || |||||||||||| |||||||||||||||||    
T  38544911 ttagtggttagagaaatccaccttaaagataaataagtggg-tgttcgggattcgaaccctgatccatgcacatattgtgcattatcccttaccaaa 38545006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 13906657 - 13906708
Alignment:
Q  211 ccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  13906657 ccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaa 13906708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 22652782 - 22652696
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||| || |||||||| | || |||||||||||||||| ||| |||||||||| ||| | |||||||||||| ||||    
T  22652782 gagaaattcacctttaacatgaataattggggtgtccggggttcgaacaccggcccctgcacaaattatgcattatcccttatcaaa 22652696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 30466766 - 30466692
Alignment:
Q  188 ttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||| || |||| | ||||||||||||  |||||||||||||||| ||||| |||||||||||    
T  30466766 ttaaagatgaataagtggggtgtctgaggttcgaaccccagcccctgcacatattgtgcattagcccttaccaaa 30466692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 33820391 - 33820477
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||| ||||||||||| | || |||| ||| |||||||||||||| ||||||| |||||  |||||||| |||||||    
T  33820391 gagaaattcacctttaagatgaataattggggtgtctgggattcgaaccccgacctctgcacaaattgtgtattatcccataccaaa 33820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 36587646 - 36587732
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||| ||||||| || ||| ||||||| |||||||||||||| ||||||||||   ||||| |||||||||    
T  36587646 gagaaattcatcttaaagataaataagtggggtgttcggggttggaaccccgacccctacacatattgtgttttatctcttaccaaa 36587732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 44828429 - 44828515
Alignment:
Q  177 agaaattcaccttaaa-gatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||| |||||||||||  | |||| ||||||||||||||   ||||||||| ||||| |||||||||||||||||    
T  44828429 agaaattcaccttaaaagatgaataagtgtggtgtctggggttcgaaccccagaccctgcacaaattgtgcattatcccttaccaaa 44828515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 45536817 - 45536731
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||  | ||||||||||||| || |||||||||||||||| ||| |||||||||| ||| | |||||||||||| ||||    
T  45536817 gagaaattcactattaagatgaataagtggggtgtccggggttcgaactccggcccctgcacaaattttgcattatcccttatcaaa 45536731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 10162028 - 10161979
Alignment:
Q  211 ccggggttcgaaccccgacccctgcacatattgtacattatcccttacca 260  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  10162028 ccggggttcgaaccccaacccctgcacatattgtgcattatcccttacca 10161979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 10201361 - 10201276
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||||||||| |||||| ||||||| |  | |||||||||||||||||||||||||| || ||||| | ||||||| ||||||||    
T  10201361 gagaaattcactttaaaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatatattatgcattatctcttaccaa 10201276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 31153584 - 31153505
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtagga-tgtccggggttcgaaccccgacccctgcacatattgtacattatccc 254  Q
    ||||||| |||||||||||||||||| | ||  |||||| |||||||| |||| |||||||||||||||| |||||||||    
T  31153584 gagaaatccaccttaaagatgaataaatgggggtgtccgaggttcgaatcccggcccctgcacatattgtgcattatccc 31153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 30660084 - 30659971
Alignment:
Q  141 atttcttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacata 240  Q
    |||| |||||||||||| ||||||   || ||| ||| ||||| ||||||||| ||||  ||| || ||||||||||| ||||||||||||||||| | |    
T  30660084 attttttttttggtcaaatagcct---agcggttggaaaaatttaccttaaaggtgaaatagtggggtgtccggggtttgaaccccgacccctgcataca 30659988  T
Q  241 ttgtacattatccctta 257  Q
    |  ||||||||||||||    
T  30659987 taatacattatccctta 30659971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 25139898 - 25139943
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  25139898 aagatgaataagtgggatgttcggggttcgaaccccgacccctgca 25139943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 8350521 - 8350449
Alignment:
Q  190 aaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||| || |||||| ||||||||| ||| |||||||| |||||||  |||||| |||||||||    
T  8350521 aaagatgaataagtggggtgtccgaggttcgaactccggcccctgcatatattgtgtattatcacttaccaaa 8350449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 14683972 - 14683920
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgaccc 231  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  14683972 aattcaccttataaggtgaataagtgggatgtccggggttcgaaccccgaccc 14683920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 43508445 - 43508525
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    ||||||||||||| ||| ||||||||| || |||||||||||| ||||||| ||||| || ||||| | |||| |||||||    
T  43508445 agaaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccggcccctacatatattatgcattgtccctta 43508525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 8349482 - 8349565
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||| ||||||||||||||||| || ||| ||| |||||||| ||| |||||||| ||||| |  |||||| |||||||||    
T  8349482 aaattcatcttaaagatgaataagtggggtgttcggagttcgaactccggcccctgcatatattctgtattatcacttaccaaa 8349565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 23139175 - 23139093
Alignment:
Q  176 gagaaattcaccttaa--agatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctt 256  Q
    ||||||||||||||||  | |||||||||| || |||| || ||||||||| || |||||||||| ||||| |||||||||||    
T  23139175 gagaaattcaccttaataaaatgaataagtggggtgtctggtgttcgaacctcggcccctgcacacattgtgcattatccctt 23139093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 35301160 - 35301219
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  |||||||||||| ||||||| |||||||||||||||||||||    
T  35301160 agaaattcacttttaaagtgaataagtagggtgtccggagttcgaaccccgacccctgca 35301219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 4798540 - 4798597
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  4798540 aattcaccttacaaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 4798597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 9525053 - 9524996
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| |||||||||||| |||| ||||||||||||||| ||||||||    
T  9525053 aattcaccttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgca 9524996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 13537310 - 13537367
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||| ||||||||||||||||| ||||||    
T  13537310 aattcaccttataagatgaataagtggggtgtctggggttcgaaccccgacacctgca 13537367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 13626858 - 13626915
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||| ||||||||||||||||| ||||||    
T  13626858 aattcaccttataagatgaataagtggggtgtctggggttcgaaccccgacacctgca 13626915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 15042364 - 15042421
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  15042364 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 15042421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 17855745 - 17855688
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||| |||||  ||||||||| || |||||||||||||||||||| ||||||||    
T  17855745 aaattcactttaaatgtgaataagtggggtgtccggggttcgaaccccggcccctgca 17855688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 24608482 - 24608539
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| |||||||||||| |||| ||||||||||||||| ||||||||    
T  24608482 aattcaccttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgca 24608539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 2696631 - 2696572
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  2696631 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 2696572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 2800117 - 2800058
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  2800117 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 2800058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 44923298 - 44923353
Alignment:
Q  182 ttcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| ||||||||||| | ||  ||||||||||||||||||||||||||||    
T  44923298 ttcaccttataagatgaataaatggggagtccggggttcgaaccccgacccctgca 44923353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 11052580 - 11052666
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||   ||||||  |||  | ||||||||||   ||| |||||||||||||||||    
T  11052580 gagaaattcaccttaaagatgaataagtggggtgtttagggttcacaccttggcccctgcacaatatgtgcattatcccttaccaaa 11052666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 41430914 - 41430865
Alignment:
Q  177 agaaattcaccttaaagatgaataagt--aggatgtccggggttcgaacc 224  Q
    |||||||||||||||||||||||||||  |||||||| | ||||||||||    
T  41430914 agaaattcaccttaaagatgaataagtggaggatgtctgaggttcgaacc 41430865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 43468704 - 43468758
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||| ||| ||||||||| || ||||||| ||||||||||||||||||    
T  43468704 aattcaccttataaggtgaataagtggggtgtccggagttcgaaccccgacccct 43468758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 574304 - 574264
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  574304 tgaataagtggg-tgtccggggttcgaaccccgacccctgca 574264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 8740655 - 8740700
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaacc 224  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  8740655 aattcaccttataagatgaataagtagggtgtccggagttcgaacc 8740700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 10309659 - 10309716
Alignment:
Q  180 aattcaccttaaaga-tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || ||| ||||||| |||||||||||||||||    
T  10309659 aattcaccttatagagtgaataagtggggtgttcggggtttgaaccccgacccctgca 10309716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 14011049 - 14011094
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| ||||||||| ||||||||| ||| ||||||||    
T  14011049 aagatgaataagtgggatgtccgaggttcgaactccggcccctgca 14011094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 25119288 - 25119247
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||| ||| |||||||||||||||||||||| |||||||||    
T  25119288 tgaatgagtgggatgtccggggttcgaaccccaacccctgca 25119247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 31129382 - 31129345
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccc 232  Q
    ||||||||| || |||||||||||||||||||||||||    
T  31129382 tgaataagtggggtgtccggggttcgaaccccgacccc 31129345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 33570428 - 33570485
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||| ||||||||||||||||| ||||    
T  33570428 aattcaccttataaggtgaataagtggggtgtccgaggttcgaaccccgacccatgca 33570485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 39484369 - 39484426
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||||||  ||||||||||| ||||||||    
T  39484369 aattcaccttataagatgaataagtggggtgtccggcattcgaaccccggcccctgca 39484426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 10621372 - 10621452
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    |||||||||| |||||| |||| || | || |||||||||||| ||||| |||||||||| | ||  | ||||||||||||    
T  10621372 agaaattcacattaaaggtgaaaaaatggggtgtccggggttcaaaccctgacccctgcatacataatgcattatccctta 10621452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 36372752 - 36372720
Alignment:
Q  178 gaaattcaccttaaagatgaataagtaggatgt 210  Q
    |||||||||||||| ||||||||||||||||||    
T  36372752 gaaattcaccttaacgatgaataagtaggatgt 36372720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 37708769 - 37708733
Alignment:
Q  200 aagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  37708769 aagtgggatgtccggggttcgaaccccggcccctgca 37708733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 3330186 - 3330279
Alignment:
Q  165 cttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttac 258  Q
    |||||||||  |||||||||||||||||||||||||||| || |||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  3330186 cttagtggttagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccgacctctgcacatattgtgcattatcccttac 3330279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 33065226 - 33065339
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   |||||   ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| |||| |||||     
T  33065226 ttttttggtcaagtagcct---agtggctagagaaattcaccttaaagatgaataagtagggtgttcggagttcgaaccccgacccctacacacattgtg 33065322  T
Q  246 cattatcccttaccaaa 262  Q
    ||||||||||| |||||    
T  33065323 cattatcccttgccaaa 33065339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 17543059 - 17543172
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||| ||||||||||||   ||||||  |||||| |||| |||||||||||||||| || ||||||| |||||||| ||| ||||||||||||||||     
T  17543059 tttttttgtcaagtagcct---agtggttagagaaagtcacattaaagatgaataagtggggtgtccggcgttcgaactccggcccctgcacatattgtg 17543155  T
Q  246 cattatcccttaccaaa 262  Q
    |||||||||||||||||    
T  17543156 cattatcccttaccaaa 17543172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 34107593 - 34107508
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||| || |||||| |||||||||||||||||| |||||||||||||||||    
T  34107593 gagaaattcaccttaaagatgaataagtggggtgtccgggttt-gaaccctgacccctgcacatattgtgcattatcccttaccaaa 34107508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 42678311 - 42678405
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||  |||||||||||||||||||||||||||| || |||||||||||||||| |||| |||| | |||||||| ||||||||||||||||    
T  42678311 tagtggttagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccgatccctacgcatattgtgcattatcccttaccaa 42678405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 18424148 - 18424221
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacatt 249  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||    
T  18424148 gagaaattcaccttaaagatgaataagtgggatgtccggagttcgaaccccggcccctgcacatattgtgcatt 18424221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 19843359 - 19843441
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttac 258  Q
    ||||||||||||||||||||||||||||  | ||||  |||||||||||| |||||||||||||||||||||| |||||||||    
T  19843359 gagaaattcaccttaaagatgaataagtgaggtgtctagggttcgaaccctgacccctgcacatattgtacatcatcccttac 19843441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 41750045 - 41749960
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||||||||||| |||| ||||| ||||||||||| |||||    
T  41750045 gagaaattcaccttaaagatgaataagtggg-tgtccggggttcaaaccccgacccctacacacattgtgcattatcccttgccaaa 41749960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 5901828 - 5901910
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacc 259  Q
    ||||||||||||| ||||||||||||| || ||||||||||| | |||||| |||||||| | ||||| ||||||||||||||    
T  5901828 agaaattcacctttaagatgaataagtggggtgtccggggtttgtaccccggcccctgcagaaattgtgcattatcccttacc 5901910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 31149098 - 31149183
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||||| || |||| || |||| |||||||||||| | | ||||||||||||||| |||||||||||||||||    
T  31149098 gagaaattcaccttaaagattaaaaagtggggtgtctggggttcgaacctc-aaccctgcacatattgtgcattatcccttaccaaa 31149183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 6866606 - 6866521
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||||||||||| |||||||  | |||||||| ||||||| |||   |||||||||||||| |||||||||||||||||    
T  6866606 agaaattcaccttaaagataaataagtgaggtgtccgggattcgaactccggttcctgcacatattgtgcattatcccttaccaaa 6866521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 20435880 - 20435829
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccg 227  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  20435880 gagaaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccg 20435829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 24202250 - 24202164
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||||||||||||||||| ||||  ||| || |||||||||||||||||||| |||||||| | ||  | ||||||||||||||||    
T  24202250 ggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatcccttaccaa 24202164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 1962921 - 1962840
Alignment:
Q  180 aattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| ||||||||||| | | | | |||||||| |||||||    
T  1962921 aattcaccttaaagatgaataagtggggtgtccggagttcgaacctcgacccctgcatacaatatgcattatcctttaccaa 1962840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 9796993 - 9796936
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  9796993 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccgacccctgca 9796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 11069345 - 11069427
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| |||||||||||    ||||| ||||| ||||||||||||| | ||||||||||||||| |||||| ||||||||||    
T  11069345 gagaaattcatcttaaagatga----gtagggtgtccagggttcgaaccccaaaccctgcacatattgtgcattattccttaccaaa 11069427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 29090515 - 29090456
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctg 234  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||| ||| ||||||    
T  29090515 ggagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaactccggcccctg 29090456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 40203275 - 40203358
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttacc 259  Q
    |||||||  |||||||| |||||||||| || | || ||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  40203275 gagaaatctaccttaaaaatgaataagtggggtatctggggttcaaaccctgacccttacacatattgtacattatcccttacc 40203358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 18949681 - 18949766
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||||| ||||| |||||||||| || ||| | ||||||||||||||||||||||||||||  | |||||||| ||| ||||    
T  18949681 gagaaattcacattaaa-atgaataagttgggtgttcagggttcgaaccccgacccctgcacatataatgcattatccgttatcaaa 18949766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 33482638 - 33482724
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||| ||||||||||||||||| || |||| | |||||||||| ||  ||||||| ||||||| ||| || ||||||||||    
T  33482638 gagaaattcatcttaaagatgaataagtggggtgtctgaggttcgaaccacggtccctgcatatattgtgcatcattccttaccaaa 33482724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 11133172 - 11133115
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||    
T  11133172 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgca 11133115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 33613601 - 33613682
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatccctta 257  Q
    |||||||||| ||||||| ||||||||| || |||||||||||||||| |||||||  ||| ||| | | ||||||||||||    
T  33613601 gagaaattcaacttaaaggtgaataagtggggtgtccggggttcgaactccgaccctcgcatataatatgcattatccctta 33613682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 36755748 - 36755636
Alignment:
Q  146 ttttttggtcaagtagcctcttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgta 245  Q
    |||||||||||||||||||   || |  |||||||| ||||||||||| ||||  ||| || |||||||||||| |||||||||||||  | ||||  |     
T  36755748 ttttttggtcaagtagcct---agcgaccggagaaagtcaccttaaaggtgaaatagttgggtgtccggggttcaaaccccgacccctatatatataatc 36755652  T
Q  246 cattatcccttaccaa 261  Q
    ||||||||||||||||    
T  36755651 cattatcccttaccaa 36755636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 25553132 - 25553227
Alignment:
Q  166 ttagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    ||||||||  |||||||||| ||||||||||||||||| |  | || | | |||||||||| | | ||||||||||||| |||||||||||||||||    
T  25553132 ttagtggttagagaaattcatcttaaagatgaataagtggagtatctgag-ttcgaaccccaatctctgcacatattgtgcattatcccttaccaaa 25553227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 19905654 - 19905709
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctg 234  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||    
T  19905654 aattcaccttataaggtgaataagtcgggtgtccggggttcgaaccccgacccctg 19905709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 27463514 - 27463608
Alignment:
Q  167 tagtggtcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||  ||||||||||| |||||||||||||||| || | | | ||||||||| |||| | |||||| ||||||| |||||| ||||||||||    
T  27463514 tagtggttagagaaattcactttaaagatgaataagtgggttat-ctgggttcgaatcccggctcctgcatatattgtgcattattccttaccaaa 27463608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 35710167 - 35710213
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaa 222  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||    
T  35710167 gagaaattcaccttaaagatgaataagtgggatgtttggggttcgaa 35710213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 43027254 - 43027168
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||| ||||||| | || |||| |||||||||||| |  | || ||||| ||||| |||||||||||| ||||    
T  43027254 gagaaattcaccttaaaggtgaataaatggggtgtctggggttcgaacctcagcacccgcacaaattgtgcattatcccttatcaaa 43027168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 3037621 - 3037678
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  3037621 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 3037678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 17239997 - 17239940
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||||| |||||||| |||||||||||||    
T  17239997 aattcaccttataagatgaataagtggggtgtccgaggttcgaatcccgacccctgca 17239940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 19052622 - 19052667
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| |||||||||||||||||| || ||||||||||    
T  19052622 aagatgaataagtgggatgtccggggttcgaatcctgacccctgca 19052667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 25783210 - 25783275
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatat 241  Q
    ||||| |||||||| ||||||||||||| || ||||| ||||||||||||  ||||||||| ||||    
T  25783210 gagaacttcaccttgaagatgaataagtggggtgtccagggttcgaaccctaacccctgcatatat 25783275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 29664699 - 29664642
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || |||||||| || |||||||||||||||||    
T  29664699 aattcaccttataagatgaataagtggggtgtccgggatttgaaccccgacccctgca 29664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 37886221 - 37886270
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccc 225  Q
    |||||||||||||||||| ||||||||| || ||||| ||||||||||||    
T  37886221 gagaaattcaccttaaaggtgaataagtggggtgtccagggttcgaaccc 37886270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 42541254 - 42541170
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||||||| ||| ||||| || |||| ||||||||||||||  |||||||| | | | | ||||||||||||||||    
T  42541254 gagaaattcaccttaaaggtgagtaagtggggtgtctggggttcgaaccccagcccctgcata-aatatccattatcccttaccaa 42541170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 43684378 - 43684329
Alignment:
Q  175 ggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaacc 224  Q
    ||||||||||||||||||| ||||||||| || ||| |||||||||||||    
T  43684378 ggagaaattcaccttaaaggtgaataagtggggtgttcggggttcgaacc 43684329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 12183728 - 12183816
Alignment:
Q  173 tcggagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    ||||||||||||||||||||| | ||  ||| ||||||| || ||||||| ||||||||||||| | ||  | |||||| |||||||||    
T  12183728 tcggagaaattcaccttaaaggtaaaatagtgggatgtctggagttcgaatcccgacccctgcatacataatgcattattccttaccaa 12183816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 20375692 - 20375632
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||| |  |||| | |||||||||||||  |||||||    
T  20375692 gagaaattcaccttaaagatgaataagtggcgtgtctgaggttcgaaccccggaccctgca 20375632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 23405299 - 23405232
Alignment:
Q  177 agaaattcacctta--aagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatatt 242  Q
    |||||||||||||   ||| ||||||||| || ||||| ||||||||||||||||||||||| |||||    
T  23405299 agaaattcacctttttaaggtgaataagtggggtgtccagggttcgaaccccgacccctgcatatatt 23405232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 32256216 - 32256176
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgc 235  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  32256216 tgaataagtgggatgtccggagttcgaaccccgacccctgc 32256176  T

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Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 33116221 - 33116261
Alignment:
Q  194 atgaataagtaggatgtccggggttcgaaccccgacccctg 234  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  33116221 atgaataagtagggtgtccggggttcgaaccccggcccctg 33116261  T

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Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 29035074 - 29035015
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||| || ||  ||||||||| || |||||||||||||||||||| ||||||||    
T  29035074 agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgca 29035015  T

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Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 3548794 - 3548845
Alignment:
Q  176 gagaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgac 229  Q
    |||||||||||||||||| ||||||  | |||| ||||||||||||||||||||    
T  3548794 gagaaattcaccttaaagttgaata--tgggatatccggggttcgaaccccgac 3548845  T

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Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 8234791 - 8234845
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||||| |||||    
T  8234791 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccct 8234845  T

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Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 17154742 - 17154688
Alignment:
Q  183 tcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||||| ||| ||||||||| || |||||||||||||||||||| ||||||||    
T  17154742 tcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgca 17154688  T

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Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 20122474 - 20122528
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||||| |||||    
T  20122474 aattcaccttataagatgaataagtggcgtgtccggggttcgaaccccggcccct 20122528  T

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Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 36520795 - 36520833
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  36520795 tgaataagtggggtgtccggggttcgaaccccgacccct 36520833  T

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Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 279809 - 279854
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| ||||||||||||||| ||||||| | ||||||    
T  279809 aagatgaataagtgggatgtccggggttcaaaccccggctcctgca 279854  T

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Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 580798 - 580839
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||||||||||||||||||| ||||||||    
T  580798 tgaataagtggggtgtccggggttcgaaccccggcccctgca 580839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 1244649 - 1244608
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || ||||||||||||||||||| |||||||||    
T  1244649 tgaataagtggggtgtccggggttcgaacccccacccctgca 1244608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 1836668 - 1836635
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccga 228  Q
    |||||||||||| |||||||||||||||||||||    
T  1836668 tgaataagtagggtgtccggggttcgaaccccga 1836635  T

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Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 9547126 - 9547183
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||||||||||||| || ||| |||| ||||||||||| ||||||||    
T  9547126 aattcaccttataagatgaataagtggggtgttcgggattcgaaccccggcccctgca 9547183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 10262819 - 10262778
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  10262819 tgaataagtggggtgtctggggttcgaaccccgacccctgca 10262778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 262
Target Start/End: Complemental strand, 16403571 - 16403538
Alignment:
Q  229 cccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||| |||||||||||||||||    
T  16403571 cccctgcacatattgtgcattatcccttaccaaa 16403538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 17777163 - 17777208
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgcacatattgtacattatcc 253  Q
    ||||||||||||||||||||||||||||| ||| | |||| |||||    
T  17777163 tgtccggggttcgaaccccgacccctgcatataatatacaatatcc 17777208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 25732018 - 25731973
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| || |||||| ||||||||| ||||||||||||    
T  25732018 aagatgaataagtggggtgtccgaggttcgaactccgacccctgca 25731973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 32891365 - 32891320
Alignment:
Q  191 aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||| || |||||||||||||||  ||||||||||||    
T  32891365 aagatgaataagtggggtgtccggggttcgaaaaccgacccctgca 32891320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 36665526 - 36665469
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| || |||||||||| || |||||| ||||||||||||| ||||||||    
T  36665526 aattcaccttataaaatgaataagtggggtgtccgaggttcgaaccccggcccctgca 36665469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 41699182 - 41699141
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || ||| |||||||||||||||||||||||||    
T  41699182 tgaataagtggggtgttcggggttcgaaccccgacccctgca 41699141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 44187784 - 44187743
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  44187784 tgaataagtggggtgtctggggttcgaaccccgacccctgca 44187743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 44721703 - 44721760
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||| | || |||||| ||||||||||||||||||||||    
T  44721703 aattcaccttataaggtgaataaatggggtgtccgaggttcgaaccccgacccctgca 44721760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 2304368 - 2304332
Alignment:
Q  197 aataagtaggatgtccggggttcgaaccccgacccct 233  Q
    ||||||| || ||||||||||||||||||||||||||    
T  2304368 aataagtggggtgtccggggttcgaaccccgacccct 2304332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 3596320 - 3596292
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  3596320 tgtccggggttcgaaccccgacccctgca 3596292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 5947936 - 5947908
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  5947936 tgtccggggttcgaaccccgacccctgca 5947908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 15069799 - 15069827
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  15069799 tgtccggggttcgaaccccgacccctgca 15069827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 38557223 - 38557251
Alignment:
Q  208 tgtccggggttcgaaccccgacccctgca 236  Q
    |||||||||||||||||||||||||||||    
T  38557223 tgtccggggttcgaaccccgacccctgca 38557251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 44666342 - 44666390
Alignment:
Q  207 atgtccggggttcgaaccccgacccctgcacatattgtacattatccct 255  Q
    |||||||||||||||||||||| ||||||| ||||| | || |||||||    
T  44666342 atgtccggggttcgaaccccgatccctgcatatattatgcaatatccct 44666390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 15328 - 15387
Alignment:
Q  177 agaaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||||||||||||| | |  |||||| ||||||||||||||||||||||||    
T  15328 agaaattcaccttaaagatgaatgactgcgatgtctggggttcgaaccccgacccctgca 15387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 121830 - 121881
Alignment:
Q  211 ccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaaa 262  Q
    |||||||||||||||||  ||||||||||||||| ||||||||| |||||||    
T  121830 ccggggttcgaaccccggtccctgcacatattgtgcattatcccctaccaaa 121881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 22555 - 22473
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgcacatattgtacattatcccttaccaa 261  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||| |  ||||| || ||| | |  |||||||||||||||    
T  22555 aaattcaccttaaaaatgaataagtgggatgtctggggttcgaacctcagcccctacatataatatgtattatcccttaccaa 22473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 16145 - 16104
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  16145 tgaataagtaggatgtccggggttcgaactccgatccctgca 16104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 4403 - 4362
Alignment:
Q  195 tgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||| |  |||||||||||||||||||||||||||||    
T  4403 tgaataagtggagtgtccggggttcgaaccccgacccctgca 4362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1112 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 2438 - 2493
Alignment:
Q  179 aaattcaccttaaagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||  ||||||||||||| || |||||||| |||||| |||||||||||||    
T  2438 aaattcacct--aagatgaataagtggggtgtccgggattcgaatcccgacccctgca 2493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 236347 - 236385
Alignment:
Q  198 ataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    |||||| || |||||||||||||||||||||||||||||    
T  236347 ataagtggggtgtccggggttcgaaccccgacccctgca 236385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 101927 - 101870
Alignment:
Q  180 aattcacctta-aagatgaataagtaggatgtccggggttcgaaccccgacccctgca 236  Q
    ||||||||||| ||| ||||||||| ||||||  ||||||||||||||| ||||||||    
T  101927 aattcaccttataaggtgaataagtgggatgtttggggttcgaaccccggcccctgca 101870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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