View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1721_low_35 (Length: 253)
Name: NF1721_low_35
Description: NF1721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1721_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12583338 - 12583093
Alignment:
| Q |
1 |
taatatgattttgttaagctctaaaatgtaactttcgttaaaagttacttcaacgacttctaacatgatttagtcaaactctttgttagtccacgtgttt |
100 |
Q |
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| T |
12583338 |
taatatgattttgttaagctctaaactgtaactttcgttaaaagttactgcaacgacttctaacatgatttagtcaaactctttgttaatccacgtgttt |
12583239 |
T |
|
| Q |
101 |
acttaaccgggatcataatgttacttgtatgttattatatgtcgcatagcctttcacgtccgacactatgaacccggttaagtacatacagatctaattg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12583238 |
acttaaccgggatcataatgttacttgtatgttattatatgtcgcatagcctttcacgtccgacactatgaacccggttaagtacatacagatctaattg |
12583139 |
T |
|
| Q |
201 |
cgacgaatgtgaaaggttatgcgacaacaataaatggtctctgctc |
246 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12583138 |
cgacgaatgtgaaaggttatgcgacaacaataaatggtctctgctc |
12583093 |
T |
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