View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1721_low_47 (Length: 237)

Name: NF1721_low_47
Description: NF1721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1721_low_47
NF1721_low_47
[»] chr5 (21 HSPs)
chr5 (3-237)||(40111251-40111485)
chr5 (66-106)||(32197847-32197887)
chr5 (68-106)||(32010059-32010097)
chr5 (65-106)||(14331480-14331521)
chr5 (70-106)||(9107204-9107240)
chr5 (66-106)||(34198535-34198575)
chr5 (68-100)||(40335791-40335823)
chr5 (68-106)||(10640067-10640105)
chr5 (65-95)||(12074361-12074391)
chr5 (69-103)||(14932413-14932447)
chr5 (68-106)||(17369317-17369355)
chr5 (65-106)||(32941583-32941625)
chr5 (69-106)||(499650-499687)
chr5 (68-105)||(35299880-35299917)
chr5 (69-106)||(36796626-36796663)
chr5 (69-106)||(39594921-39594958)
chr5 (69-106)||(41419433-41419470)
chr5 (69-106)||(41534552-41534589)
chr5 (68-105)||(42647005-42647042)
chr5 (67-119)||(35445761-35445813)
chr5 (70-98)||(39105587-39105615)
[»] chr3 (27 HSPs)
chr3 (66-119)||(25447161-25447214)
chr3 (71-106)||(26911705-26911740)
chr3 (69-107)||(26990144-26990182)
chr3 (72-106)||(33405114-33405148)
chr3 (65-106)||(30657400-30657441)
chr3 (65-102)||(36507007-36507044)
chr3 (69-105)||(31615479-31615515)
chr3 (69-100)||(32582857-32582888)
chr3 (68-119)||(42747700-42747751)
chr3 (65-96)||(47903995-47904026)
chr3 (68-106)||(16072959-16072997)
chr3 (64-106)||(20501982-20502024)
chr3 (68-106)||(29114539-29114577)
chr3 (65-107)||(45432868-45432910)
chr3 (68-101)||(849823-849856)
chr3 (69-106)||(3775770-3775807)
chr3 (69-106)||(20210847-20210884)
chr3 (69-106)||(20874230-20874267)
chr3 (64-101)||(21271079-21271116)
chr3 (65-106)||(41848631-41848672)
chr3 (65-106)||(50946201-50946242)
chr3 (65-97)||(2100094-2100126)
chr3 (161-237)||(2128280-2128356)
chr3 (65-101)||(24887215-24887251)
chr3 (68-100)||(36769881-36769913)
chr3 (69-101)||(43875585-43875617)
chr3 (68-100)||(44014716-44014748)
[»] chr7 (27 HSPs)
chr7 (66-119)||(34036018-34036071)
chr7 (62-106)||(28691748-28691792)
chr7 (68-106)||(30812252-30812290)
chr7 (68-106)||(44822072-44822110)
chr7 (65-106)||(47046023-47046064)
chr7 (65-105)||(35808865-35808905)
chr7 (65-99)||(7612551-7612585)
chr7 (68-106)||(19302481-19302519)
chr7 (66-108)||(30134244-30134286)
chr7 (65-106)||(529476-529517)
chr7 (69-106)||(1418533-1418570)
chr7 (69-106)||(11619077-11619114)
chr7 (69-102)||(11782962-11782995)
chr7 (69-106)||(19624291-19624328)
chr7 (69-98)||(20526568-20526597)
chr7 (69-106)||(24048654-24048691)
chr7 (65-106)||(24975990-24976031)
chr7 (65-98)||(29287348-29287381)
chr7 (69-106)||(33266405-33266442)
chr7 (65-102)||(37064383-37064420)
chr7 (65-102)||(41040283-41040320)
chr7 (69-106)||(44917445-44917482)
chr7 (65-97)||(28340992-28341024)
chr7 (65-93)||(29281935-29281963)
chr7 (70-106)||(34464141-34464177)
chr7 (63-95)||(47134671-47134703)
chr7 (70-106)||(47941422-47941458)
[»] chr4 (31 HSPs)
chr4 (65-106)||(27043745-27043786)
chr4 (65-99)||(7367969-7368003)
chr4 (68-106)||(22662169-22662207)
chr4 (68-106)||(22666648-22666686)
chr4 (68-106)||(25571373-25571411)
chr4 (65-106)||(26590638-26590679)
chr4 (69-106)||(41336874-41336911)
chr4 (66-103)||(52315113-52315150)
chr4 (69-102)||(52428782-52428815)
chr4 (65-101)||(679410-679446)
chr4 (66-106)||(41433489-41433529)
chr4 (67-107)||(46415708-46415748)
chr4 (69-100)||(3891711-3891742)
chr4 (67-106)||(9720571-9720610)
chr4 (65-100)||(28615454-28615489)
chr4 (65-99)||(7297660-7297694)
chr4 (68-106)||(17822783-17822821)
chr4 (68-106)||(32071977-32072015)
chr4 (68-106)||(42403941-42403979)
chr4 (68-106)||(55437190-55437228)
chr4 (65-106)||(2244165-2244206)
chr4 (70-119)||(15173223-15173272)
chr4 (65-106)||(18512430-18512471)
chr4 (65-98)||(21953395-21953428)
chr4 (65-102)||(25309310-25309347)
chr4 (65-106)||(37636101-37636142)
chr4 (69-98)||(52169939-52169968)
chr4 (69-106)||(55870261-55870298)
chr4 (69-97)||(12163006-12163034)
chr4 (69-97)||(37575855-37575883)
chr4 (65-101)||(53315445-53315481)
[»] chr2 (21 HSPs)
chr2 (70-106)||(40059381-40059417)
chr2 (70-106)||(40085281-40085317)
chr2 (68-106)||(1830153-1830191)
chr2 (65-119)||(18179050-18179104)
chr2 (68-105)||(7103391-7103428)
chr2 (65-106)||(8017548-8017589)
chr2 (63-99)||(2142775-2142811)
chr2 (68-104)||(10619138-10619174)
chr2 (69-105)||(23974412-23974448)
chr2 (69-105)||(33197180-33197216)
chr2 (69-100)||(37419586-37419617)
chr2 (71-106)||(42419907-42419942)
chr2 (68-106)||(15370241-15370279)
chr2 (68-106)||(27317493-27317531)
chr2 (69-119)||(30331852-30331902)
chr2 (68-106)||(41170724-41170762)
chr2 (69-106)||(2416427-2416464)
chr2 (66-99)||(6561458-6561491)
chr2 (65-106)||(7193776-7193817)
chr2 (69-106)||(22878212-22878249)
chr2 (69-106)||(40837356-40837393)
[»] chr8 (23 HSPs)
chr8 (65-100)||(10727464-10727499)
chr8 (68-106)||(38602441-38602479)
chr8 (61-94)||(18930821-18930854)
chr8 (66-106)||(40728327-40728367)
chr8 (65-99)||(1892139-1892173)
chr8 (68-106)||(7008712-7008750)
chr8 (68-106)||(14280339-14280377)
chr8 (68-106)||(15180653-15180691)
chr8 (68-106)||(30251372-30251410)
chr8 (69-119)||(30657696-30657746)
chr8 (65-99)||(40357049-40357083)
chr8 (69-106)||(1096604-1096641)
chr8 (65-106)||(1889050-1889091)
chr8 (69-106)||(2487927-2487964)
chr8 (69-106)||(2606163-2606200)
chr8 (70-106)||(4560616-4560652)
chr8 (68-100)||(5349504-5349536)
chr8 (70-106)||(6496811-6496847)
chr8 (74-106)||(6950436-6950468)
chr8 (68-100)||(16162880-16162912)
chr8 (66-106)||(35928646-35928686)
chr8 (65-101)||(38537710-38537746)
chr8 (67-99)||(42893407-42893439)
[»] chr1 (22 HSPs)
chr1 (63-106)||(6292606-6292649)
chr1 (66-100)||(30013995-30014029)
chr1 (69-100)||(172492-172523)
chr1 (71-106)||(17009503-17009538)
chr1 (63-98)||(24417648-24417683)
chr1 (69-100)||(29045852-29045883)
chr1 (71-106)||(30257798-30257833)
chr1 (72-106)||(2522710-2522744)
chr1 (68-106)||(26184857-26184895)
chr1 (69-119)||(50644174-50644224)
chr1 (70-119)||(24334296-24334345)
chr1 (68-105)||(24460319-24460356)
chr1 (66-119)||(33204310-33204363)
chr1 (69-98)||(37617384-37617413)
chr1 (69-106)||(41505788-41505825)
chr1 (72-100)||(5894113-5894141)
chr1 (68-119)||(11893285-11893334)
chr1 (71-99)||(23445454-23445482)
chr1 (65-101)||(25719790-25719826)
chr1 (65-105)||(33976293-33976333)
chr1 (75-123)||(38116002-38116050)
chr1 (70-106)||(39976130-39976166)
[»] chr6 (20 HSPs)
chr6 (68-106)||(30536883-30536921)
chr6 (69-106)||(4308891-4308928)
chr6 (65-106)||(7351586-7351627)
chr6 (65-106)||(21405069-21405110)
chr6 (67-106)||(9202902-9202941)
chr6 (68-106)||(7785662-7785700)
chr6 (68-106)||(34404644-34404682)
chr6 (69-106)||(1231218-1231255)
chr6 (65-106)||(3525238-3525279)
chr6 (69-106)||(31594296-31594333)
chr6 (65-106)||(31624374-31624415)
chr6 (69-102)||(31776191-31776224)
chr6 (66-99)||(31811640-31811673)
chr6 (69-106)||(33027706-33027743)
chr6 (69-106)||(33089620-33089657)
chr6 (65-106)||(33737684-33737725)
chr6 (67-99)||(2386575-2386607)
chr6 (65-97)||(29270023-29270055)
chr6 (65-101)||(31623669-31623705)
chr6 (66-106)||(33068518-33068558)
[»] scaffold1252 (1 HSPs)
scaffold1252 (66-106)||(390-430)


Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 40111485 - 40111251
Alignment:
Q  3 caacaatatagaaaatataaaaaattatcatccatattttcttactataacaaccatcaaatggtctgtttggattgacttatttgagtttatctactga 102  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40111485 caacaaaatagaaaatataaaaaattatcatccatattttcttactataacaaccatcaaatggtctgtttcgattgacttatttgagtttatctactga 40111386  T
Q  103 catagctattgtgagacggttgaagtacttatgaaatatgttaatacgctattttcaacagcttattatcacacgttctctaatatagattattaaaaca 202  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40111385 catagctattgtgagacggtttaagtacttatgaaatatgttaataagctattttcaacagcttattatcacacgttctctaatatagattattaaaaca 40111286  T
Q  203 gcttacaaagaaacactttaactttattttatctt 237  Q
    ||||||  ||||||| |||||||||||||||||||    
T  40111285 gcttacgcagaaacaatttaactttattttatctt 40111251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 32197887 - 32197847
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  32197887 gtctgtttggattgacttttttgagtttatctactgacata 32197847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 32010097 - 32010059
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  32010097 ctgtttggattgacttatttgagtttatctactcacata 32010059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 14331521 - 14331480
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  14331521 ggtctgtttggattgacttatttgagcttatctactgtcata 14331480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 9107240 - 9107204
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||||| |||||||    
T  9107240 gtttggattgacttatttgagtttatctagtgacata 9107204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 34198575 - 34198535
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  34198575 gtctgtttggattgacttatttgagtttatttactaacata 34198535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 40335791 - 40335823
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctact 100  Q
    |||||||||||||||||||||||||||||||||    
T  40335791 ctgtttggattgacttatttgagtttatctact 40335823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 10640105 - 10640067
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  10640105 ctgtttggattagcttatttgagtttatctactgacata 10640067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 12074361 - 12074391
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttat 95  Q
    |||||||||||||||||||||||||||||||    
T  12074361 ggtctgtttggattgacttatttgagtttat 12074391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Complemental strand, 14932447 - 14932413
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgac 103  Q
    |||||||||||||||||||||| ||||||||||||    
T  14932447 tgtttggattgacttatttgagcttatctactgac 14932413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 17369355 - 17369317
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  17369355 ctgtttggattgacttatttgaacttatctactgacata 17369317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 32941625 - 32941583
Alignment:
Q  65 ggtctgtttggattgacttatttgag-tttatctactgacata 106  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    
T  32941625 ggtctgtttggattgacttattagagctttatctactgacata 32941583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 499650 - 499687
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  499650 tgtttggattgacttatttgagcttacctactgacata 499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 35299917 - 35299880
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacat 105  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  35299917 ctgtttggattgacttatttgagcttatctattgacat 35299880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 36796626 - 36796663
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  36796626 tgtttggattgacttatttgagcttatctaatgacata 36796663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 39594958 - 39594921
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  39594958 tgtttggattgacttatttgagcttatctaccgacata 39594921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 41419470 - 41419433
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41419470 tgtttggattgacttatttgagctaatctactgacata 41419433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 41534589 - 41534552
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41534589 tgtttggattgacttatttgagctaatctactgacata 41534552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 42647042 - 42647005
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacat 105  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  42647042 ctgtttggattggcttatttgagcttatctactgacat 42647005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 35445761 - 35445813
Alignment:
Q  67 tctgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    |||||||||||   ||||||||||||||||||||||||||  | |||||||||    
T  35445761 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagac 35445813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 39105615 - 39105587
Alignment:
Q  70 gtttggattgacttatttgagtttatcta 98  Q
    |||||||||||||||||||||||||||||    
T  39105615 gtttggattgacttatttgagtttatcta 39105587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 25447161 - 25447214
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  25447161 gtctgtttggattgacttatttgagtttatctactgacataagttttgtgagac 25447214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 26911740 - 26911705
Alignment:
Q  71 tttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  26911740 tttggattgacttatttgagtttatctactgacata 26911705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 26990144 - 26990182
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacatag 107  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  26990144 tgtttggattgacttatttgagcttatctactgacatag 26990182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 33405114 - 33405148
Alignment:
Q  72 ttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||||||||||    
T  33405114 ttggattgacttatttgagtttatctactgacata 33405148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 30657441 - 30657400
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  30657441 ggtctgtttgaattgatttatttgagtttatctactgacata 30657400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 36507007 - 36507044
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactga 102  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36507007 ggtctgtttggattggcttatttgagtttatctactga 36507044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 31615479 - 31615515
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacat 105  Q
    ||||||||||||||||||||||||||||||| |||||    
T  31615479 tgtttggattgacttatttgagtttatctacggacat 31615515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 100
Target Start/End: Complemental strand, 32582888 - 32582857
Alignment:
Q  69 tgtttggattgacttatttgagtttatctact 100  Q
    ||||||||||||||||||||||||||||||||    
T  32582888 tgtttggattgacttatttgagtttatctact 32582857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 42747700 - 42747751
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    |||||||| ||||||||||||||||||||||||  ||||  |||||||||||    
T  42747700 ctgtttggtttgacttatttgagtttatctacttccataagtattgtgagac 42747751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 96
Target Start/End: Original strand, 47903995 - 47904026
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatc 96  Q
    ||||||||||||||||||||||||||||||||    
T  47903995 ggtctgtttggattgacttatttgagtttatc 47904026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 16072959 - 16072997
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  16072959 ctgtttggattgacttatttgagcttatctaatgacata 16072997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 20501982 - 20502024
Alignment:
Q  64 tggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||    
T  20501982 tggtctgtttggattgacttatttcagtttatctcctggcata 20502024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 29114577 - 29114539
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  29114577 ctgtttcgattgacttatttgactttatctactgacata 29114539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 45432868 - 45432910
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacatag 107  Q
    ||||||||||||||||||||||| |  ||||||||||||||||    
T  45432868 ggtctgtttggattgacttattttaacttatctactgacatag 45432910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 849856 - 849823
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactg 101  Q
    |||||||||||||||||||||| |||||||||||    
T  849856 ctgtttggattgacttatttgaatttatctactg 849823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 3775770 - 3775807
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  3775770 tgtttggattgccttatttgagtttatctactggcata 3775807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 20210847 - 20210884
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  20210847 tgtttggattgatttatttgaggttatctactgacata 20210884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 20874230 - 20874267
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||| || |||||||    
T  20874230 tgtttggattgacttatttgagtttatataatgacata 20874267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 21271116 - 21271079
Alignment:
Q  64 tggtctgtttggattgacttatttgagtttatctactg 101  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  21271116 tggtctgtttgggttgacttatttgagtttatatactg 21271079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 41848631 - 41848672
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||| ||| |||||||||||||||||||||||||| |||||    
T  41848631 ggtctatttagattgacttatttgagtttatctactaacata 41848672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 50946201 - 50946242
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| |||||||||||||||||||| || |||||    
T  50946201 ggtctgtttggaatgacttatttgagtttatctcctaacata 50946242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 2100094 - 2100126
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatct 97  Q
    |||||||||||||||||||||||||| ||||||    
T  2100094 ggtctgtttggattgacttatttgagcttatct 2100126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 2128280 - 2128356
Alignment:
Q  161 cagcttattatcacacgttctctaatatagattattaaaacagcttacaaagaaacactttaactttattttatctt 237  Q
    ||||||||| ||| |||||||  || || | |||| |||||||||||||   ||||| |||||||||||||||||||    
T  2128280 cagcttattttcatacgttctaaaagatggcttatgaaaacagcttacagtaaaacaatttaactttattttatctt 2128356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 24887215 - 24887251
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactg 101  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  24887215 ggtctgtttggatttactgatttgagtttatctactg 24887251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 36769881 - 36769913
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctact 100  Q
    |||||||||||||||||||||| ||||||||||    
T  36769881 ctgtttggattgacttatttgattttatctact 36769913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 43875617 - 43875585
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactg 101  Q
    |||||| ||||||||||||||||||||||||||    
T  43875617 tgtttgaattgacttatttgagtttatctactg 43875585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 44014716 - 44014748
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctact 100  Q
    |||||||||||| ||||||||||||||||||||    
T  44014716 ctgtttggattggcttatttgagtttatctact 44014748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 34036071 - 34036018
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    ||||||||| ||||||||||||||| |||||||||||||||  |||||||||||    
T  34036071 gtctgtttgaattgacttatttgagcttatctactgacatatgtattgtgagac 34036018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 28691748 - 28691792
Alignment:
Q  62 aatggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||||||||||| || |||||    
T  28691748 aatggtctgtttggattgacttatttgagtttatctgctaacata 28691792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 30812290 - 30812252
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  30812290 ctgtttggattgacttatttgagtttacctactgacata 30812252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 44822110 - 44822072
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  44822110 ctgtttggattgacttatttgagtttatctgctgacata 44822072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 47046023 - 47046064
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  47046023 ggtctgtttggattgacttatttgtgcttatctactgacata 47046064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 35808865 - 35808905
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacat 105  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  35808865 ggtctgtttggattgactaatttcagtttatctactgacat 35808905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 7612585 - 7612551
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctac 99  Q
    ||||| |||||||||||||||||||||||||||||    
T  7612585 ggtctatttggattgacttatttgagtttatctac 7612551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 19302481 - 19302519
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  19302481 ctgtttgaattgacttatttgagcttatctactgacata 19302519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 30134286 - 30134244
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacatagc 108  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||    
T  30134286 gtctgtttgaattaacttatttgagcttatctactgacatagc 30134244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 529517 - 529476
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||| ||||||||||||||||||| |||||||||| ||||    
T  529517 ggtctgattggattgacttatttgagcttatctactggcata 529476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 1418570 - 1418533
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  1418570 tgtttggattgacttatttgagcttatctactggcata 1418533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 11619077 - 11619114
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  11619077 tgtttggattggcttatttgagcttatctactgacata 11619114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 11782962 - 11782995
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactga 102  Q
    |||||||||||||||||||||| |||||||||||    
T  11782962 tgtttggattgacttatttgagattatctactga 11782995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 19624328 - 19624291
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  19624328 tgtttggcttgacttatttgagtttatctattgacata 19624291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 98
Target Start/End: Complemental strand, 20526597 - 20526568
Alignment:
Q  69 tgtttggattgacttatttgagtttatcta 98  Q
    ||||||||||||||||||||||||||||||    
T  20526597 tgtttggattgacttatttgagtttatcta 20526568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 24048691 - 24048654
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  24048691 tgtttgaatttacttatttgagtttatctactgacata 24048654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 24976031 - 24975990
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||| ||||||| ||||||||| |||||    
T  24976031 ggtctgtttggattgactaatttgagcttatctactaacata 24975990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 29287381 - 29287348
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatcta 98  Q
    |||||||||||||||||| |||||||||||||||    
T  29287381 ggtctgtttggattgactaatttgagtttatcta 29287348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 33266405 - 33266442
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  33266405 tgtttggattgacttatttgagcttatctaccgacata 33266442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 37064383 - 37064420
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactga 102  Q
    |||||||||||||||||||||||||  |||||||||||    
T  37064383 ggtctgtttggattgacttatttgatcttatctactga 37064420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 41040320 - 41040283
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactga 102  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  41040320 ggtctgtttgaattgatttatttgagtttatctactga 41040283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 44917445 - 44917482
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  44917445 tgtttggattgacttatttgagtttatctcccgacata 44917482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 28340992 - 28341024
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatct 97  Q
    |||||||||||||||||||||||||| ||||||    
T  28340992 ggtctgtttggattgacttatttgagcttatct 28341024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 93
Target Start/End: Complemental strand, 29281963 - 29281935
Alignment:
Q  65 ggtctgtttggattgacttatttgagttt 93  Q
    |||||||||||||||||||||||||||||    
T  29281963 ggtctgtttggattgacttatttgagttt 29281935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 34464141 - 34464177
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  34464141 gtttggattgatttatttgagtttatctattgacata 34464177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 47134671 - 47134703
Alignment:
Q  63 atggtctgtttggattgacttatttgagtttat 95  Q
    |||| ||||||||||||||||||||||||||||    
T  47134671 atggcctgtttggattgacttatttgagtttat 47134703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 47941458 - 47941422
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||  |||||||||||||||||||||||||    
T  47941458 gtttggattggtttatttgagtttatctactgacata 47941422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 27043745 - 27043786
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  27043745 ggtctgtttggattgacttatttgagcttatctactgacata 27043786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 7367969 - 7368003
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctac 99  Q
    |||||||||||||||||||||||||||||||||||    
T  7367969 ggtctgtttggattgacttatttgagtttatctac 7368003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 22662169 - 22662207
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  22662169 ctgtttggattgacttatttgagtttatctactaacata 22662207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 22666648 - 22666686
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  22666648 ctgtttggattgacttatttgagtttatctactaacata 22666686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 25571411 - 25571373
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  25571411 ctgtttggattggcttatttgagtttatctactgacata 25571373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 26590679 - 26590638
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  26590679 ggtctgtttggattgaattatttgagtttatctacttacata 26590638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 41336911 - 41336874
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||||||| |||||    
T  41336911 tgtttggattgacttatttgagtttatctactcacata 41336874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 52315113 - 52315150
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgac 103  Q
    |||| |||||||||||||||||||||||||||||||||    
T  52315113 gtctctttggattgacttatttgagtttatctactgac 52315150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 102
Target Start/End: Complemental strand, 52428815 - 52428782
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactga 102  Q
    ||||||||||||||||||||||||||||||||||    
T  52428815 tgtttggattgacttatttgagtttatctactga 52428782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 679446 - 679410
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactg 101  Q
    |||||||||| ||||||||||||||||||||||||||    
T  679446 ggtctgtttgaattgacttatttgagtttatctactg 679410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 41433529 - 41433489
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  41433529 gtctgtttgaattgacttatttgagtttatctcctgacata 41433489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 46415708 - 46415748
Alignment:
Q  67 tctgtttggattgacttatttgagtttatctactgacatag 107  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  46415708 tctgtttggattgacttatttgagttcatccactgacatag 46415748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 100
Target Start/End: Complemental strand, 3891742 - 3891711
Alignment:
Q  69 tgtttggattgacttatttgagtttatctact 100  Q
    ||||||||||||||||||||||||||||||||    
T  3891742 tgtttggattgacttatttgagtttatctact 3891711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 9720571 - 9720610
Alignment:
Q  67 tctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  9720571 tctgttgggattgacttatttgagtttatctactaacata 9720610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 28615489 - 28615454
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctact 100  Q
    ||||||||||||||||||||||| ||||||||||||    
T  28615489 ggtctgtttggattgacttatttaagtttatctact 28615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 7297694 - 7297660
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctac 99  Q
    |||||||||||||||| ||||||||||||||||||    
T  7297694 ggtctgtttggattgatttatttgagtttatctac 7297660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 17822783 - 17822821
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  17822783 ctgtttggattaacttatttgagcttatctactgacata 17822821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 32072015 - 32071977
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  32072015 ctgtttggactgacttatttgagtttatctattgacata 32071977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 42403941 - 42403979
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  42403941 ctgtttggattgacttatttgagcttatcaactgacata 42403979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 55437228 - 55437190
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  55437228 ctgtttggattggcttatttgagtttatctactgccata 55437190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 2244206 - 2244165
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  2244206 ggtctgtttggattgatttatccgagtttatctactgacata 2244165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 15173223 - 15173272
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    ||||||||||||||||||||  |||||||||||||||  | |||||||||    
T  15173223 gtttggattgacttatttgaacttatctactgacataagttttgtgagac 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 18512430 - 18512471
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||| |||| ||||||||||| |||||||||||||||    
T  18512430 ggtctgtttcgattaacttatttgagcttatctactgacata 18512471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 21953428 - 21953395
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatcta 98  Q
    |||||||||||||||||||||||||| |||||||    
T  21953428 ggtctgtttggattgacttatttgagcttatcta 21953395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 25309347 - 25309310
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactga 102  Q
    |||||||||||||||||||||||||  |||||||||||    
T  25309347 ggtctgtttggattgacttatttgaacttatctactga 25309310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 37636101 - 37636142
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||| |||||||||| ||||||||||||||||||| |||||    
T  37636101 ggtctatttggattgatttatttgagtttatctactaacata 37636142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 52169939 - 52169968
Alignment:
Q  69 tgtttggattgacttatttgagtttatcta 98  Q
    ||||||||||||||||||||||||||||||    
T  52169939 tgtttggattgacttatttgagtttatcta 52169968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 55870261 - 55870298
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  55870261 tgtttggattaacttatttgagtttatctaatgacata 55870298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 97
Target Start/End: Complemental strand, 12163034 - 12163006
Alignment:
Q  69 tgtttggattgacttatttgagtttatct 97  Q
    |||||||||||||||||||||||||||||    
T  12163034 tgtttggattgacttatttgagtttatct 12163006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 37575855 - 37575883
Alignment:
Q  69 tgtttggattgacttatttgagtttatct 97  Q
    |||||||||||||||||||||||||||||    
T  37575855 tgtttggattgacttatttgagtttatct 37575883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 53315481 - 53315445
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactg 101  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  53315481 ggtctgtttggattgacttatttgagcttatccactg 53315445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 40059381 - 40059417
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||||||||||||    
T  40059381 gtttggattgacttatttgagtttatctactgacata 40059417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 40085281 - 40085317
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||||||||||||    
T  40085281 gtttggattgacttatttgagtttatctactgacata 40085317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 1830191 - 1830153
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  1830191 ctgtttggattgacttatttgagtttatttactgacata 1830153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 18179104 - 18179050
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    |||||||||||||||||||||||||| ||||||||| |||||  | |||||||||    
T  18179104 ggtctgtttggattgacttatttgagcttatctactaacataagttttgtgagac 18179050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 7103391 - 7103428
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacat 105  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  7103391 ctgtttggattgacttatttgagtttatctattgacat 7103428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 8017589 - 8017548
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  8017589 ggtctgtttggattgacttatttgaggttatctattgacata 8017548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 2142811 - 2142775
Alignment:
Q  63 atggtctgtttggattgacttatttgagtttatctac 99  Q
    ||||||||||||| |||||||||||||||||||||||    
T  2142811 atggtctgtttggtttgacttatttgagtttatctac 2142775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 10619138 - 10619174
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgaca 104  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10619138 ctgtttggattgactcatttgagtttatctactgaca 10619174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 23974412 - 23974448
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacat 105  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23974412 tgtttggattgacttatttgggtttatctactgacat 23974448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 33197180 - 33197216
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacat 105  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33197180 tgtttggattgacttatttgagtttatcaactgacat 33197216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 100
Target Start/End: Original strand, 37419586 - 37419617
Alignment:
Q  69 tgtttggattgacttatttgagtttatctact 100  Q
    ||||||||||||||||||||||||||||||||    
T  37419586 tgtttggattgacttatttgagtttatctact 37419617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 42419942 - 42419907
Alignment:
Q  71 tttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||| ||||||||    
T  42419942 tttggattgacttatttgagtttatcttctgacata 42419907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 15370241 - 15370279
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  15370241 ctgtttggattgacttatttgagcttatctactggcata 15370279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 27317531 - 27317493
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  27317531 ctgtttggattgacttatttgagcttatctaccgacata 27317493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 30331902 - 30331852
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    ||||||||||||||||||| || |||||||||||||||  | |||||||||    
T  30331902 tgtttggattgacttatttcagcttatctactgacataagttttgtgagac 30331852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 41170762 - 41170724
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  41170762 ctgtttggattggcttatttgagtttatctactaacata 41170724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 2416464 - 2416427
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  2416464 tgtttagattgacttatttgagtttatctactaacata 2416427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 6561491 - 6561458
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctac 99  Q
    ||||||||| ||||||||||||||||||||||||    
T  6561491 gtctgtttgaattgacttatttgagtttatctac 6561458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 7193776 - 7193817
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||| ||| || |||||||||||||    
T  7193776 ggtctgtttggattgacttatctgaattcatctactgacata 7193817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 22878249 - 22878212
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacata 22878212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 40837356 - 40837393
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  40837356 tgtttggattggcttatttgagcttatctactgacata 40837393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 10727499 - 10727464
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctact 100  Q
    ||||||||||||||||||||||||||||||||||||    
T  10727499 ggtctgtttggattgacttatttgagtttatctact 10727464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 38602479 - 38602441
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  38602479 ctgtttggattgacttatttgagcttatctactgacata 38602441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 18930854 - 18930821
Alignment:
Q  61 aaatggtctgtttggattgacttatttgagttta 94  Q
    ||||||||||||||||||||||||||||||||||    
T  18930854 aaatggtctgtttggattgacttatttgagttta 18930821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 40728327 - 40728367
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  40728327 gtctgtttggattgacttatttgagtctatctactggcata 40728367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 1892139 - 1892173
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctac 99  Q
    ||||||||| |||||||||||||||||||||||||    
T  1892139 ggtctgtttagattgacttatttgagtttatctac 1892173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 7008750 - 7008712
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  7008750 ctgtttgaattgacttatttgagtttatctactggcata 7008712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 14280339 - 14280377
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  14280339 ctgtttggattgacttatttgattttatctactggcata 14280377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 15180691 - 15180653
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  15180691 ctgtttggattggcttatttgagtttatctactgccata 15180653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 30251372 - 30251410
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  30251372 ctgtttggattggcttatttgagcttatctactgacata 30251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 30657696 - 30657746
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    ||||||||| |||||||||||||||||||| |||||||  | |||||||||    
T  30657696 tgtttggatcgacttatttgagtttatctaatgacataaattttgtgagac 30657746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 40357083 - 40357049
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctac 99  Q
    |||||||||||||||| ||||||||||||||||||    
T  40357083 ggtctgtttggattgatttatttgagtttatctac 40357049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 1096641 - 1096604
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||| || |||||||    
T  1096641 tgtttggattgacttatttgagtttatttagtgacata 1096604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 1889050 - 1889091
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||    
T  1889050 ggtctgtttagatggacttatttgagtttatctactggcata 1889091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 2487927 - 2487964
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacata 2487964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 2606200 - 2606163
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  2606200 tgtttggattgacttattcgagcttatctactgacata 2606163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 4560652 - 4560616
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  4560652 gtttggattgacttatttgagcttatctattgacata 4560616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 5349504 - 5349536
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctact 100  Q
    |||||||||||||||||||||||| ||||||||    
T  5349504 ctgtttggattgacttatttgagtatatctact 5349536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 6496811 - 6496847
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||| |||||||||||||||| |||||    
T  6496811 gtttggattgacttgtttgagtttatctactaacata 6496847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 6950468 - 6950436
Alignment:
Q  74 ggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||| ||||    
T  6950468 ggattgacttatttgagtttatctactggcata 6950436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 16162912 - 16162880
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctact 100  Q
    |||||||||||| ||||||||||||||||||||    
T  16162912 ctgtttggattggcttatttgagtttatctact 16162880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 35928646 - 35928686
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||| ||||||| || |||||||||||||||    
T  35928646 gtctgtttggattgtcttattttagcttatctactgacata 35928686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 38537746 - 38537710
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactg 101  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  38537746 ggtctgtttgggttgactcatttgagtttatctactg 38537710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 42893407 - 42893439
Alignment:
Q  67 tctgtttggattgacttatttgagtttatctac 99  Q
    |||||||||||| ||||||||||||||||||||    
T  42893407 tctgtttggattaacttatttgagtttatctac 42893439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 6292649 - 6292606
Alignment:
Q  63 atggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||| |||||||||||||||||||||| |||||||||||||||    
T  6292649 atggtttgtttggattgacttatttgagcttatctactgacata 6292606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 30013995 - 30014029
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctact 100  Q
    |||||||||||||||||||||||||||||||||||    
T  30013995 gtctgtttggattgacttatttgagtttatctact 30014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 100
Target Start/End: Original strand, 172492 - 172523
Alignment:
Q  69 tgtttggattgacttatttgagtttatctact 100  Q
    ||||||||||||||||||||||||||||||||    
T  172492 tgtttggattgacttatttgagtttatctact 172523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 17009503 - 17009538
Alignment:
Q  71 tttggattgacttatttgagtttatctactgacata 106  Q
    |||| |||||||||||||||||||||||||||||||    
T  17009503 tttgaattgacttatttgagtttatctactgacata 17009538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 24417648 - 24417683
Alignment:
Q  63 atggtctgtttggattgacttatttgagtttatcta 98  Q
    |||||| |||||||||||||||||||||||||||||    
T  24417648 atggtcggtttggattgacttatttgagtttatcta 24417683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 100
Target Start/End: Original strand, 29045852 - 29045883
Alignment:
Q  69 tgtttggattgacttatttgagtttatctact 100  Q
    ||||||||||||||||||||||||||||||||    
T  29045852 tgtttggattgacttatttgagtttatctact 29045883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 30257833 - 30257798
Alignment:
Q  71 tttggattgacttatttgagtttatctactgacata 106  Q
    |||||||| |||||||||||||||||||||||||||    
T  30257833 tttggatttacttatttgagtttatctactgacata 30257798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 2522744 - 2522710
Alignment:
Q  72 ttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||||||| ||||    
T  2522744 ttggattgacttatttgagtttatctactggcata 2522710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 26184895 - 26184857
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  26184895 ctgtttggattgacttatttgagtttttctattgacata 26184857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 50644174 - 50644224
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    |||||||||||||||||||||| ||||||||| |||||  | |||||||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagac 50644224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 24334345 - 24334296
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    ||||||||||||||||||||||||||| || ||||||  | |||||||||    
T  24334345 gtttggattgacttatttgagtttatcaacggacataagttttgtgagac 24334296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 24460319 - 24460356
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacat 105  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  24460319 ctgtttggattgacttatttgaacttatctactgacat 24460356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 33204310 - 33204363
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    |||||||| ||| |||||||||||| |||||||||||||||  | |||||||||    
T  33204310 gtctgtttagatcgacttatttgagcttatctactgacataagttttgtgagac 33204363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 37617384 - 37617413
Alignment:
Q  69 tgtttggattgacttatttgagtttatcta 98  Q
    ||||||||||||||||||||||||||||||    
T  37617384 tgtttggattgacttatttgagtttatcta 37617413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 41505825 - 41505788
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  41505825 tgtttggattggcttatttgagcttatctactgacata 41505788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 5894113 - 5894141
Alignment:
Q  72 ttggattgacttatttgagtttatctact 100  Q
    |||||||||||||||||||||||||||||    
T  5894113 ttggattgacttatttgagtttatctact 5894141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 11893334 - 11893285
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacatagctattgtgagac 119  Q
    ||||||||||||||||||||||  |||| ||||||||||  |||||||||||    
T  11893334 ctgtttggattgacttatttga--ttatatactgacataaatattgtgagac 11893285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 99
Target Start/End: Complemental strand, 23445482 - 23445454
Alignment:
Q  71 tttggattgacttatttgagtttatctac 99  Q
    |||||||||||||||||||||||||||||    
T  23445482 tttggattgacttatttgagtttatctac 23445454  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 25719826 - 25719790
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactg 101  Q
    |||||||||||||||| |||||||||||||| |||||    
T  25719826 ggtctgtttggattgatttatttgagtttatttactg 25719790  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 33976333 - 33976293
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacat 105  Q
    |||||||||||||||||||||||||| |||| || ||||||    
T  33976333 ggtctgtttggattgacttatttgagcttatttaatgacat 33976293  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 38116002 - 38116050
Alignment:
Q  75 gattgacttatttgagtttatctactgacatagctattgtgagacggtt 123  Q
    |||||||||||||||| |||||||||||| ||  | |||||||||||||    
T  38116002 gattgacttatttgagcttatctactgacgtaagttttgtgagacggtt 38116050  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 39976130 - 39976166
Alignment:
Q  70 gtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  39976130 gtttggactgacttatttgagattatctactgacata 39976166  T

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Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 30536883 - 30536921
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  30536883 ctgtttggattgacttatttgagtttatctacttacata 30536921  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 4308928 - 4308891
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  4308928 tgtttggattggcttatttgagtttatctactgacata 4308891  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 7351586 - 7351627
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  7351586 ggtctgtttaaattgacttatttgagtttatctactgacata 7351627  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 21405069 - 21405110
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  21405069 ggtctgtttggattgacttatttgagcttatatactgacata 21405110  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 9202902 - 9202941
Alignment:
Q  67 tctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  9202902 tctgtttggattgacttatttgagcttatctactggcata 9202941  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 7785662 - 7785700
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  7785662 ctgtttggattgtcttatttgaatttatctactgacata 7785700  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 34404644 - 34404682
Alignment:
Q  68 ctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  34404644 ctgtttggatttacttatttgagtttatcaactgacata 34404682  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 1231218 - 1231255
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  1231218 tgtttggattgatttatttgagtttatctattgacata 1231255  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 3525279 - 3525238
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||| |||| |||||||||| |||||||    
T  3525279 ggtctgtttggattgactaatttaagtttatctagtgacata 3525238  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 31594296 - 31594333
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  31594296 tgtttggattgacttatttgtgtttatctacttacata 31594333  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 31624415 - 31624374
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||||| |||||||||| |||| ||||||||||    
T  31624415 ggtctgtttggattggcttatttgagcttatatactgacata 31624374  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 31776191 - 31776224
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactga 102  Q
    |||||||||||||||||||||| |||||||||||    
T  31776191 tgtttggattgacttatttgagcttatctactga 31776224  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 31811640 - 31811673
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctac 99  Q
    |||||||||||||||| |||||||||||||||||    
T  31811640 gtctgtttggattgacatatttgagtttatctac 31811673  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 33027743 - 33027706
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  33027743 tgtttggattgatttatttgagcttatctactgacata 33027706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 33089657 - 33089620
Alignment:
Q  69 tgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  33089657 tgtttgggttgacttatttgagcttatctactgacata 33089620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 33737725 - 33737684
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||| ||||||||| ||||||||||| |||||||    
T  33737725 ggtctgtttggaatgacttattcgagtttatctattgacata 33737684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 2386575 - 2386607
Alignment:
Q  67 tctgtttggattgacttatttgagtttatctac 99  Q
    ||||||||||||||||||||| |||||||||||    
T  2386575 tctgtttggattgacttatttaagtttatctac 2386607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 29270055 - 29270023
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatct 97  Q
    ||||||||||||||||||||||||| |||||||    
T  29270055 ggtctgtttggattgacttatttgactttatct 29270023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 31623705 - 31623669
Alignment:
Q  65 ggtctgtttggattgacttatttgagtttatctactg 101  Q
    |||||||||| |||||||||||||| |||||||||||    
T  31623705 ggtctgtttgaattgacttatttgaatttatctactg 31623669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 33068518 - 33068558
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacata 106  Q
    |||||||||||||| |||||||||  |||||||||||||||    
T  33068518 gtctgtttggattggcttatttgaacttatctactgacata 33068558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1252 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1252
Description:

Target: scaffold1252; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 430 - 390
Alignment:
Q  66 gtctgtttggattgacttatttgagtttatctactgacata 106  Q
    ||||||||||||| |||||||||||||||| ||||| ||||    
T  430 gtctgtttggattaacttatttgagtttatatactgccata 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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