View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17222_high_13 (Length: 409)

Name: NF17222_high_13
Description: NF17222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17222_high_13
NF17222_high_13
[»] chr5 (14 HSPs)
chr5 (1-393)||(1600882-1601270)
chr5 (30-393)||(8528025-8528391)
chr5 (42-390)||(8534601-8534953)
chr5 (155-332)||(8640694-8640871)
chr5 (155-243)||(9002563-9002651)
chr5 (72-239)||(9075116-9075281)
chr5 (1-41)||(8527787-8527827)
chr5 (155-205)||(8548785-8548835)
chr5 (155-215)||(8677560-8677620)
chr5 (155-205)||(8550856-8550906)
chr5 (122-215)||(8636303-8636396)
chr5 (155-192)||(8640467-8640504)
chr5 (155-188)||(9002300-9002333)
chr5 (175-215)||(8643817-8643857)
[»] chr7 (3 HSPs)
chr7 (95-376)||(48362358-48362638)
chr7 (155-211)||(35777552-35777608)
chr7 (1-41)||(48362867-48362907)
[»] chr4 (2 HSPs)
chr4 (30-360)||(9442192-9442516)
chr4 (1-41)||(9441954-9441994)
[»] chr6 (1 HSPs)
chr6 (155-285)||(16715636-16715768)
[»] chr1 (3 HSPs)
chr1 (30-170)||(26324320-26324466)
chr1 (155-193)||(5130082-5130120)
chr1 (1-41)||(26325040-26325080)
[»] scaffold0627 (1 HSPs)
scaffold0627 (155-229)||(3775-3849)


Alignment Details
Target: chr5 (Bit Score: 372; Significance: 0; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 1 - 393
Target Start/End: Complemental strand, 1601270 - 1600882
Alignment:
Q  1 tgtatggaaattccttcttatcagctgtactcttcaccaaattcttcaccatcagacgaggatgaagataaatttttcaagtcaccaaaagatgatggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1601270 tgtatggaaattccttcttatcagctgtactcttcaccaaattcttcaccatcagacgaggatgaagataaatttttcaagtcaccaaaagatgatggaa 1601171  T
Q  101 aacatgtagtttctaagtcttaaacagtcagttgagacagagatagaccttccgtttcttcccgcaatttaaactttgcacacctatataaattaaaaca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1601170 aacatgtagtttctaagtcttaaacagtcagttgagacagagatagaccttccgtttcttcccgcaatttaaactttgcacacctatataaattaaaaca 1601071  T
Q  201 atatttgggaataatggttaagtaatattagctaaaacttcaaattgcaggggatggaatacacttaagaaacaatttactacttagcaactaagaacgt 300  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1601070 atatttgggaataatggttaagtaatattagctaaaactgcaaattgcaggggatggaatacacttaagaaacaatttactacttagcaactaagaacgt 1600971  T
Q  301 tcaaataactgacattacaacaactgtccattcattttctcctcctccatcaacacgaaagtatataggaaatttagatgtaattagtaacaa 393  Q
    ||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1600970 tcaaataactgacattacaacaactgtc----cattttctcctcctccatcaacacgaaagtatataggaaatttagatgtaattagtaacaa 1600882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 30 - 393
Target Start/End: Original strand, 8528025 - 8528391
Alignment:
Q  30 ctcttcaccaaattcttcaccatcagacgaggatgaagataaatttttcaagtcaccaaaagatgatggaaaacatgtagtttctaagtcttaaacagtc 129  Q
    |||||| ||||| ||||||||||||||  |||| ||||||| |||| ||||||||| | ||||||||| ||| |||| | |||| |||||| ||||| ||    
T  8528025 ctcttcgccaaactcttcaccatcagataaggaggaagatatatttatcaagtcactataagatgatgaaaagcatgaactttc-aagtctcaaacaatc 8528123  T
Q  130 agttgagacagagatagaccttccgtttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataatggttaagtaatatt 229  Q
     ||||||||||||| ||| | ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||| |    
T  8528124 tgttgagacagagaaagaacctccttttctccccgcaatttaaactttgcacacctatagaaattaaaacaatattggggaatattggttaagtaatagt 8528223  T
Q  230 agctaaaacttcaaattgcaggggatggaatacacttaagaaacaatttactacttagcaact-aagaacgttcaaataactgacattacaacaactgtc 328  Q
    |||||||||| ||||||||||||||||||  |  || ||||||| ||||||||| |||||||| |||||  | |||||||| |||| |||||||||||||    
T  8528224 agctaaaactgcaaattgcaggggatggatcagcctcaagaaactatttactacctagcaactaaagaagatccaaataaccgacaatacaacaactgtc 8528323  T
Q  329 cattcattttctcctcctccatcaacacgaaagtatataggaaattt---agatgtaattagtaacaa 393  Q
    |||||||||||| | |||||||||||||||||||||| || ||||||   ||||||||||||||||||    
T  8528324 cattcattttctacacctccatcaacacgaaagtataaagaaaatttataagatgtaattagtaacaa 8528391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 42 - 390
Target Start/End: Original strand, 8534601 - 8534953
Alignment:
Q  42 ttcttcaccatcagacgaggatgaagataaatttttcaagtcaccaaaagatgatggaaaacatgtagtttctaagtcttaaacagtcagttgaga---c 138  Q
    |||||||||||||||  |||| | ||||| |||| ||||||||||| ||||||||| |||||||| | ||   |||||| ||||| || |||||||   |    
T  8534601 ttcttcaccatcagataaggaggcagatatatttatcaagtcaccataagatgatgaaaaacatgaacttc--aagtctcaaacaatc-gttgagatcgc 8534697  T
Q  139 agagatagaccttccgtttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataatggttaagtaatattagctaaaac 238  Q
    | ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  8534698 aaagaaagaacttccttttcttcccgcaatttaaactttgcacacctatataaattaaaacaatattggggaatattggttaagtaatagtagctaaaac 8534797  T
Q  239 ttcaaattgcaggggatggaatacacttaagaaacaatttactacttagcaact-aagaacgttcaaataactgacattacaacaactgtccattcattt 337  Q
    | |||||| |||||||||||  |  || ||||||| ||||||||| |||||||| |||||  | ||||||||||| ||||||||||||||||||||||||    
T  8534798 tgcaaattacaggggatggatcagcctcaagaaactatttactacctagcaactaaagaagatccaaataactgagattacaacaactgtccattcattt 8534897  T
Q  338 tctcctcctccatcaacacgaaagtatataggaaattt---agatgtaattagtaa 390  Q
    ||| ||||||| |||||||||||||||| |||||| ||   |||||||||||||||    
T  8534898 tcttctcctccgtcaacacgaaagtataaaggaaagttataagatgtaattagtaa 8534953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 155 - 332
Target Start/End: Original strand, 8640694 - 8640871
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataatggttaagtaatattagctaaaacttcaaattgcagggga 254  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||| |||    
T  8640694 tttcttctcccaatttaaactttgcacacctatataaattaaaacaatattagggaacaatggttaagtaatattagctaaaactgaaaattgcagagga 8640793  T
Q  255 tggaatacacttaagaaacaatttactacttagcaac-taagaacgttcaaataactgacattacaacaactgtccatt 332  Q
    |||||||  ||| | |||| |||||||||||| |||| |||| |  | || | |||||| |||||||||||| ||||||    
T  8640794 tggaatagtcttgaaaaac-atttactacttaacaacttaagcagatccataaaactgaaattacaacaactatccatt 8640871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 9002563 - 9002651
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataatggttaagtaatattagctaaaacttcaa 243  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||| || |||||| |||||||||||||||||||||    
T  9002563 tttcttccctcaatttaaactttgcacacctatataaattacaacaatattcaggaacaacggttaaataatattagctaaaacttcaa 9002651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 9075281 - 9075116
Alignment:
Q  72 atttttcaagtcaccaaaagatgatggaaaacatgtagtttctaagtcttaaacagtcagttgagacagagatagaccttccgtttcttcccgcaattta 171  Q
    |||| ||||||||||  ||||||||| ||||||| || |||  |||||| ||||| ||  |||| ||||||| ||| | ||| |||||||||||||||||    
T  9075281 atttatcaagtcaccgtaagatgatgaaaaacatatacttt--aagtctcaaacaatctcttgaaacagagaaagaacgtccctttcttcccgcaattta 9075184  T
Q  172 aactttgcacacctatataaattaaaacaatatttgggaataatggttaagtaatattagctaaaact 239  Q
    |||||||||||||||||  ||| ||| |  |||| | |||||||||| ||||||||||||||||||||    
T  9075183 aactttgcacacctataataatcaaaccggtattagagaataatggtcaagtaatattagctaaaact 9075116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8527787 - 8527827
Alignment:
Q  1 tgtatggaaattccttcttatcagctgtactcttcaccaaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8527787 tgtatggaaattccttcttatcagctgtactcttcaccaaa 8527827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 8548835 - 8548785
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatt 205  Q
    |||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  8548835 tttcttcctgaaatttaaactttacacacctatataaattaaaacaatatt 8548785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 8677560 - 8677620
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataat 215  Q
    ||||||||||||||| ||  ||||||||||||||| ||||||||||||||| | |||||||    
T  8677560 tttcttcccgcaattcaacatttgcacacctatatcaattaaaacaatattagcgaataat 8677620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 8550906 - 8550856
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatt 205  Q
    |||||||| |||||||| |||||||||||||| |||||||| |||||||||    
T  8550906 tttcttcctgcaatttatactttgcacacctaaataaattataacaatatt 8550856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 8636303 - 8636396
Alignment:
Q  122 aaacagtcagttgagacagagatagaccttccgtttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataat 215  Q
    |||||||  |||||||||  || ||| ||||  |||||||| |||||| ||  ||||||||||||||| ||| ||||||||||  |||||||||    
T  8636303 aaacagtttgttgagacaaggaaagaacttcattttcttccggcaattcaacatttgcacacctatatcaatcaaaacaatatgagggaataat 8636396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 8640467 - 8640504
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaa 192  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  8640467 tttcttcacgcaatttaaattttgcacacctatataaa 8640504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 9002300 - 9002333
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctata 188  Q
    ||||||| ||||||||||||||||||||||||||    
T  9002300 tttcttcacgcaatttaaactttgcacacctata 9002333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 8643817 - 8643857
Alignment:
Q  175 tttgcacacctatataaattaaaacaatatttgggaataat 215  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  8643817 tttgcacacctatatcaattaaaacaatattaaggaataat 8643857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 7e-96; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 95 - 376
Target Start/End: Complemental strand, 48362638 - 48362358
Alignment:
Q  95 atggaaaacatgtagtttctaagtcttaaacagtcagttgagacagagatagaccttccgtttcttcccgcaatttaaactttgcacacctatataaatt 194  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  48362638 atggaaaacatgtagtttctaagtctcaaacaatctgttgagacagagatataccttccttttcttcctgcaatttaaactttgcacacctatataaatt 48362539  T
Q  195 aaaacaatatttgggaataatggttaagtaatattagctaaaacttcaaattgcaggggatggaatacacttaagaaacaatttactacttagcaactaa 294  Q
    ||| |||||||  |||||||||||||||||||||||||||||||| |||||||||| ||||||||||  ||  | |||| |||||||| ||| |||||||    
T  48362538 aaaccaatattcaggaataatggttaagtaatattagctaaaactgcaaattgcagaggatggaatagtctcga-aaactatttactaattaccaactaa 48362440  T
Q  295 gaacgttcaaataactgacattacaacaactgtccattcattttctcctcctccatcaacacgaaagtatataggaaattta 376  Q
    ||| || ||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  48362439 gaaggtccaaataactgacattacaacaacttcccattcattttctcgtcctccatcaacacgaaagtataaaggaaattta 48362358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 35777552 - 35777608
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaa 211  Q
    ||||||||| ||||||| |||||||||||||||||| || | ||||||||| |||||    
T  35777552 tttcttcccacaatttatactttgcacacctatatacatgacaacaatattagggaa 35777608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48362907 - 48362867
Alignment:
Q  1 tgtatggaaattccttcttatcagctgtactcttcaccaaa 41  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  48362907 tgtatggaaattccctcttatcagttgtactcttcaccaaa 48362867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 30 - 360
Target Start/End: Original strand, 9442192 - 9442516
Alignment:
Q  30 ctcttcaccaaattcttcaccatcagacgaggatgaagataaatttttcaagtcaccaaaagatgatggaaaacatgtagtttctaagtcttaaacagtc 129  Q
    |||||||||||| ||||||||||||||  |||| ||||||| |||| ||||||||| | ||||||||| ||| |||| | |||| || ||| ||||        
T  9442192 ctcttcaccaaactcttcaccatcagataaggaggaagatatatttatcaagtcactataagatgatgaaaagcatgaactttcaaa-tctcaaac---- 9442286  T
Q  130 agttgagacagagatagaccttccgtttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataatggttaagtaatatt 229  Q
      |||||||||||| ||| | ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| ||||||| ||||| |    
T  9442287 --ttgagacagagaaagaacctccttttctccccgcaatttaaactttgcacacctatagaaattaaaacaatattgaggaatattggttaattaatagt 9442384  T
Q  230 agctaaaacttcaaattgcaggggatggaatacacttaagaaacaatttactacttagcaact-aagaacgttcaaataactgacattacaacaactgtc 328  Q
    |||||||||| ||||||||||||||||||  |  || ||||||| ||||||||| |||||||| |||||  | |||||||| |||| |||||||||||||    
T  9442385 agctaaaactgcaaattgcaggggatggatcagcctcaagaaactatttactacatagcaactaaagaagatccaaataaccgacaatacaacaactgtc 9442484  T
Q  329 cattcattttctcctcctccatcaacacgaaa 360  Q
    |||||||||||| | |||||||||||||||||    
T  9442485 cattcattttctacgcctccatcaacacgaaa 9442516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9441954 - 9441994
Alignment:
Q  1 tgtatggaaattccttcttatcagctgtactcttcaccaaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9441954 tgtatggaaattccttcttatcagctgtactcttcaccaaa 9441994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 285
Target Start/End: Original strand, 16715636 - 16715768
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataatggttaagtaatattagctaaaacttcaaattgca--ggg 252  Q
    ||||||||||||||||||||||| |||||||||||| |  ||||||||||| |||||  |||  ||||||||||||||||||| | ||| ||| |  |||    
T  16715636 tttcttcccgcaatttaaactttccacacctatatagaagaaaacaatattagggaacgatgactaagtaatattagctaaaattgcaatttgtaggggg 16715735  T
Q  253 gatggaatacacttaagaaacaatttactactt 285  Q
    | |||||||  || |||||||||||||||||||    
T  16715736 ggtggaataagctcaagaaacaatttactactt 16715768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 26324466 - 26324320
Alignment:
Q  30 ctcttcaccaaattcttcaccatcagacgaggatgaagataaatttttcaagtcaccaaaagatgatggaaaacatgtagtttctaagtcttaaacagtc 129  Q
    |||||||||||| ||||||||||||||  |||| ||||||| |||| ||||||||||| ||||||||| ||| |||| | |||| |||||| ||| | ||    
T  26324466 ctcttcaccaaactcttcaccatcagataaggaggaagatatatttatcaagtcaccataagatgatgaaaagcatgaactttc-aagtctcaaaaaatc 26324368  T
Q  130 -------agttgagacagagatagaccttccgtttcttcccgcaattt 170  Q
           |||||||||||||| ||| ||||| ||||||||||||||||    
T  26324367 tgttgagagttgagacagagaaagaacttccttttcttcccgcaattt 26324320  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 5130082 - 5130120
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaat 193  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  5130082 tttcttcccgcaatttaaactttgcacacctgtataaat 5130120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26325080 - 26325040
Alignment:
Q  1 tgtatggaaattccttcttatcagctgtactcttcaccaaa 41  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  26325080 tgtatggaaattccttctaatcagttgtactcttcaccaaa 26325040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 3775 - 3849
Alignment:
Q  155 tttcttcccgcaatttaaactttgcacacctatataaattaaaacaatatttgggaataatggttaagtaatatt 229  Q
    ||||||| ||||||||||||||| |||||||||||||   |||||| |||| |||||  |||  |||||||||||    
T  3775 tttcttcacgcaatttaaactttccacacctatataatagaaaacagtattagggaacgatgactaagtaatatt 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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