View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17224_high_2 (Length: 269)
Name: NF17224_high_2
Description: NF17224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17224_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 39591877 - 39592119
Alignment:
| Q |
12 |
gtgatattcttctgaccattatggtaaacgaacaaaggagaagttgaactcgaagcaagatgaaacaaagtaagttatgctgctagtttggcactagaca |
111 |
Q |
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| T |
39591877 |
gtgatattcttctgaccattatggtaaacgaacaaaggagaagttgaacttgaagcaagatgaaacaaagtaagttatgctgctagtttggcacttgaca |
39591976 |
T |
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| Q |
112 |
gtacaaaaataggatggtaaagttaggaatgaccttgtagagttctttatagtagagttagataactgtatgactattatttttgaaaaaggtgggttcc |
211 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39591977 |
gtacaaaaataggttggtaaagttaggaatgaccttgtagagttctttatagtagagttagataactgtatgactattatttttgaaaaaggtgggttcc |
39592076 |
T |
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| Q |
212 |
ttcatagcgtcctgttgttgttgttatgtctcacatcactgca |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39592077 |
ttcatagcgtcctgttgttgttgttatgtctcacatcactgca |
39592119 |
T |
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