View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17224_high_5 (Length: 239)
Name: NF17224_high_5
Description: NF17224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17224_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 17871977 - 17872199
Alignment:
| Q |
1 |
tttttgttgttactagtactagcttgatggacgctaatgtgatcttcagctgaaccagtagggtccactagacacgtgatatctgtgtctacattggtga |
100 |
Q |
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| T |
17871977 |
tttttgttgttactagtactagcttgatggacgctaatgtgatcttcagctgaactagtagggtccactagacacgtgatatctgtgtctacattggtga |
17872076 |
T |
|
| Q |
101 |
aagtagctgtaacagtttcatctgattgtgttttggatttgttggtttgttgaaggcggacaagggacgagtagatgccattttcattttgtagaagttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
17872077 |
aagtagctgtaacagtttcatctgattgtgttttggatttgttggtttgttgaaggcggacaagggacgagtagatgccattttcattttctagaagttc |
17872176 |
T |
|
| Q |
201 |
atcctgtgagccaatctcattga |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
17872177 |
atcctgtgagccaatctcattga |
17872199 |
T |
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