View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17224_low_6 (Length: 251)
Name: NF17224_low_6
Description: NF17224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17224_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 17871998 - 17871758
Alignment:
| Q |
1 |
ctagtactagtaacaacaaaaatgaagaagacgtgaagcaactaaataatccggtgtcattttggagattacttctactgaatgctccagaatggaagca |
100 |
Q |
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| T |
17871998 |
ctagtactagtaacaacaaaaatgaagaagacgtgaagcaactaaataatccggtgtcattttggagattacttctactgaacgctccagaatggaagca |
17871899 |
T |
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| Q |
101 |
agcggttttagggtgtttgagtgcaatggtgttcggtgcagttcaacctgtttacgcatttgcaatggggtcgatgatatctgtgtattttcaaacagat |
200 |
Q |
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| T |
17871898 |
agcggttttagggtgtttgagtgcaatggtgttcggtgcagttcaacctgtttacgcatttgcaatggggtcgatgatatctgtgtattttcaaacagat |
17871799 |
T |
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| Q |
201 |
tacgaggagctaaagaacaagattaaaatctattccctttg |
241 |
Q |
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|||||||||||||| |||||||||||||||||||| ||||| |
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| T |
17871798 |
tacgaggagctaaaaaacaagattaaaatctattctctttg |
17871758 |
T |
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