View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17225_high_11 (Length: 229)
Name: NF17225_high_11
Description: NF17225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17225_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 31644675 - 31644884
Alignment:
| Q |
1 |
caaaactaaatcaggtaatcaattcagttactgaaaagtgaaaacaccagggctaagcttcttttgaattcatgctcggtcactggtagtcgagcatctg |
100 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |
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| T |
31644675 |
caaaaccaaatcaggtaatcaattcagttactgaaaagtgaaaacaccagggctaagcttcttttgaattcatgcacggtcactggtagtcaagcatctg |
31644774 |
T |
|
| Q |
101 |
ctaatcctctctatgccgttcatcaagatattctgtcaagattttggaactgtatagaaatatatttgactagctttgataaatggaataaaagcataac |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
31644775 |
ctaatcctctctatgccgttcatcaagatattctgtcaagattttggaactgtctagaaatatatttgactagctttgataaacggaataaaagcataac |
31644874 |
T |
|
| Q |
201 |
tcataatatc |
210 |
Q |
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|||||||||| |
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| T |
31644875 |
tcataatatc |
31644884 |
T |
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