View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17225_high_9 (Length: 276)
Name: NF17225_high_9
Description: NF17225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17225_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 15662572 - 15662816
Alignment:
| Q |
18 |
agaaaaacatatatgtatactatatatacctcaaaccatgataattcaagcatcatttgtaaagctgctcccgagactatattgagacgatcaggcggtg |
117 |
Q |
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| T |
15662572 |
agaaaaacatatatgtatactatatatacctcaaaccatgataattcaagcatcatttgtaaagctgctcccgagactatattgagacgatcaggcggtg |
15662671 |
T |
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| Q |
118 |
ctaacattgctgcagaatgcaataaattattctcgccatcatccagaaaaccatttatgcaatctttcaaagaccttatttcatgtatcaaattgaagat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15662672 |
ctaacattgctgcagaatgcaataaattattctcgccatcatccagaaaaccatttatgcaatctttcaaagaccttatttcatgtatcaaattgaagat |
15662771 |
T |
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| Q |
218 |
actagcatggcggttgaaaacagcgatgtgaattatgctctgacc |
262 |
Q |
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| T |
15662772 |
actagcatggcggttgaaaacagcgatgtgaattatgctctgacc |
15662816 |
T |
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