View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17230_high_1_N (Length: 373)

Name: NF17230_high_1_N
Description: NF17230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17230_high_1_N
NF17230_high_1_N
[»] chr1 (4 HSPs)
chr1 (1-350)||(11780115-11780465)
chr1 (157-329)||(10424593-10424765)
chr1 (247-329)||(1624838-1624920)
chr1 (246-305)||(30731478-30731537)
[»] chr7 (1 HSPs)
chr7 (1-341)||(17158540-17158884)
[»] chr6 (4 HSPs)
chr6 (6-347)||(14977470-14977814)
chr6 (43-214)||(11776308-11776482)
chr6 (158-214)||(9352421-9352477)
chr6 (166-214)||(24353638-24353686)
[»] chr2 (1 HSPs)
chr2 (26-347)||(12101751-12102070)
[»] chr5 (3 HSPs)
chr5 (151-329)||(5781902-5782080)
chr5 (43-329)||(19069420-19069709)
chr5 (220-317)||(17763963-17764060)
[»] chr3 (6 HSPs)
chr3 (157-324)||(16311632-16311799)
chr3 (157-324)||(18488416-18488583)
chr3 (157-324)||(18492626-18492793)
chr3 (146-309)||(19829018-19829181)
chr3 (157-295)||(16314023-16314161)
chr3 (157-295)||(18495017-18495155)
[»] chr8 (1 HSPs)
chr8 (157-313)||(17459431-17459587)


Alignment Details
Target: chr1 (Bit Score: 299; Significance: 1e-168; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 11780465 - 11780115
Alignment:
Q  1 gttgttacttctcatatgacggtccctatgcctaggacatcattgtcgtcaacatctttcagctttccactgcataacgtgtttgacaacatttctagtg 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  11780465 gttgttacttctcatatgacggtccctatgcccaggacatcattgtcgtcaacatctttcagctttccactacataacgtgtttgacagcgtttctagtg 11780366  T
Q  101 aggagctgttactagctacgccagtgtttgaaattgtttcccgg-ttgcatgatgaagtgcattctgagagagtggagcagtcgcatccgacatcgcggg 199  Q
    |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  11780365 aggagctgctactagctacgccagtgtttgaaattgtttccccgattgcatgatgaaatgcattctgagagagtgaagcagtcgcatccgacatcgcggg 11780266  T
Q  200 gggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtggaacataatcattcgcgcccacaggatctggtggagagtccgaa 299  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11780265 aggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtggaacataatcattcgcgcccacaggagctggtggagagtccgaa 11780166  T
Q  300 gggtgcccatgagcatgtaccacattcatcaattgttgagcaagatgatgt 350  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11780165 gggtgcccatgagcatgtaccacattcatcaattgttgagcacgatgatgt 11780115  T

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Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 157 - 329
Target Start/End: Complemental strand, 10424765 - 10424593
Alignment:
Q  157 gtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtgg 256  Q
    |||||||||||||||||||| || | ||||| ||||||||||| ||  ||||||||||  || || || |||||  ||   ||||| || ||||||||||    
T  10424765 gtgcattctgagagagtggaacaattgcatctgacatcgcgggaggtattggagaaccccgtggtggatgatgtctctgttacgctttctgatgatgtgg 10424666  T
Q  257 aacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgtaccacattcatc 329  Q
    || |||||| ||||||||||| ||| |||||||||||||| |||||| || | |||| |||||||||||||||    
T  10424665 aatataatcgttcgcgcccacgggagctggtggagagtcctaagggttcctacgagcgtgtaccacattcatc 10424593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 1624920 - 1624838
Alignment:
Q  247 gatgatgtggaacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgtaccacattcatc 329  Q
    |||||||||||||| |||  |||| |||| | ||| ||||| |||||||| |||||| |||| |||| |||||||||||||||    
T  1624920 gatgatgtggaacacaatagttcgagcccgcgggagctggtcgagagtcccaagggttcccacgagcgtgtaccacattcatc 1624838  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 30731478 - 30731537
Alignment:
Q  246 ggatgatgtggaacataatcattcgcgcccacaggatctggtggagagtccgaagggtgc 305  Q
    ||||| |||||||||| |||||  | |||||||||| |||||||||||||| ||||||||    
T  30731478 ggatggtgtggaacatgatcatgtgagcccacaggagctggtggagagtcccaagggtgc 30731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 2e-96; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 17158884 - 17158540
Alignment:
Q  1 gttgttacttctcatatgacggtccctatgcctaggacatcattgtcgtcaacatctttcagctttccactgcataacgtgtttgacaacatttctagtg 100  Q
    ||||||||||||||  |||| ||||||||||| | ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  17158884 gttgttacttctcagttgacagtccctatgcccaagacgtcattgtcgtcaacacctttcagctttccactacataacgtgtttgacaacatttctagtg 17158785  T
Q  101 aggagctgttactagctacgccagtgtttgaaattgtttcccggtt---gcatgatgaagtgcattctgagagagt-ggagcagtcgcatccgacatcgc 196  Q
    |  |||||  ||| |||||||||||||||||||||||||||  |||   ||| ||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  17158784 aaaagctgccactcgctacgccagtgtttgaaattgtttcctagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatccgatatcgc 17158685  T
Q  197 ggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtggaacataatcattcgcgcccacaggatctggtggagagtcc 296  Q
    ||| |||||||||||||| ||| ||||||||||||||| | || ||||||||||||||||| ||||||||||||| |||  || |  |||||||||||||    
T  17158684 gggaggagttggagaaccctgtggttgacgatgttactgcgacactctcggatgatgtggagcataatcattcgcacccctagtagttggtggagagtcc 17158585  T
Q  297 gaagggtgcccatgagcatgtaccacattcatcaattgttgagca 341  Q
     ||||| | |||||||||||||| |||||||||||||||| ||||    
T  17158584 caagggggaccatgagcatgtactacattcatcaattgttaagca 17158540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 347
Target Start/End: Original strand, 14977470 - 14977814
Alignment:
Q  6 tacttctcatatgacggtccctatgcctaggacatcattgtcgtcaacatctttcagctttccactgcataacgtgtttgacaacatttctagtgaggag 105  Q
    ||||||||| |||| ||||||| |||| ||||| || ||||| ||||||||||| ||||| ||| | || ||| ||||||| |  |||||||||||| ||    
T  14977470 tacttctcagatgatggtccctgtgcccaggacgtctttgtcatcaacatcttttagcttcccattacacaacatgtttgatagtatttctagtgagaag 14977569  T
Q  106 ctgttactagctacgccagtgtttgaaattgtttcccg-gttgc--atgatgaagtgcattctgagagagtggagcagtcgcatccgacatcgcgggggg 202  Q
     ||  |  |||||| |||||| ||||  |||| ||||  |||||  | ||||| |||||||| |||||||||||||||||||||||||||||||||| ||    
T  14977570 ttgccagaagctacaccagtgattgagtttgtgtccccagttgcgcacgatgacgtgcattccgagagagtggagcagtcgcatccgacatcgcgggagg 14977669  T
Q  203 agttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtggaacataatcattcgcgcccacaggatctggtggagagtccgaaggg 302  Q
    || || ||| ||     ||||||||||||||| | ||||| ||  |||||||||||||||||||||||  ||| | ||| |||||||||||||| |||||    
T  14977670 aggtgcagatcccaacggttgacgatgttactgctacgctatcttatgatgtggaacataatcattcgaccccgcgggagctggtggagagtcccaaggg 14977769  T
Q  303 tgcccatgagcatgtaccacattcatcaattgttgagcaagatga 347  Q
    | ||||||||||||| ||||||||||| |||||| |||| |||||    
T  14977770 ttcccatgagcatgttccacattcatccattgtttagcatgatga 14977814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 11776482 - 11776308
Alignment:
Q  43 ttgtcgtcaacatctttcagctttccactgcataacgtgtttgacaacatttctagtgaggagctgttactagctacgccagtgtttgaaattgtttccc 142  Q
    ||||||||||  ||||||||||||||| | ||||| | ||||||||| ||||||  ||||||| ||  ||  | ||| |||||||| ||  |||||||||    
T  11776482 ttgtcgtcaaactctttcagctttccattacataatgcgtttgacaaaatttctcatgaggagttgccacatgttacaccagtgttagaggttgtttccc 11776383  T
Q  143 g-gttg--catgatgaagtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaacc 214  Q
      ||||  || ||||| ||||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||    
T  11776382 ctgttgtgcacgatgatgtgcattctgagagagtggagcagttgcatcagtcatcgcgggaggagttggagaacc 11776308  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 9352477 - 9352421
Alignment:
Q  158 tgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaacc 214  Q
    ||||||||||||||||||| |||| || || ||||||||| | || |||||||||||    
T  9352477 tgcattctgagagagtggaacagttgcgtctgacatcgcgagaggtgttggagaacc 9352421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 24353686 - 24353638
Alignment:
Q  166 gagagagtggagcagtcgcatccgacatcgcggggggagttggagaacc 214  Q
    ||||||| | |||||| ||||| ||||||||||| ||||||||||||||    
T  24353686 gagagagcgaagcagttgcatcagacatcgcgggaggagttggagaacc 24353638  T

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Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 26 - 347
Target Start/End: Original strand, 12101751 - 12102070
Alignment:
Q  26 ctatgcctaggacatcattgtcgtcaacatctttcagctttccactgcataacgtgtttgacaacatttctagtgaggagctgttactagctacgccagt 125  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||   || ||| || | |||    
T  12101751 ctatgcctatgacgtcattgtcgtcaacatctttcagctttccactacataacgtgtttaacaatatttctagcgaggagctaccacaagcaacacgagt 12101850  T
Q  126 gtttgaaattgtttcccggtt---gcatgatgaagtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagtt 222  Q
    |||||||||| ||||||   |   ||| ||||| |||||| ||||||||| ||||||  | ||| |||||||||||| ||||||||||||||   | | |    
T  12101851 gtttgaaattatttccccaattgtgcacgatgacgtgcatcctgagagagcggagcaaacacattcgacatcgcgggaggagttggagaaccccatggct 12101950  T
Q  223 gacgatgttactccaacgctctcggatgatgtggaacata----atcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgta 318  Q
    |||||||||||| | |  |         ||||||||||||    ||||||||||||| | ||| |||||||||||||| ||||||||| |||||||||||    
T  12101951 gacgatgttactacgatac---------atgtggaacatatataatcattcgcgcccccgggagctggtggagagtcccaagggtgcctatgagcatgta 12102041  T
Q  319 ccacattcatcaattgttgagcaagatga 347  Q
    ||||||||||||||||||||||| |||||    
T  12102042 ccacattcatcaattgttgagcacgatga 12102070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 151 - 329
Target Start/End: Complemental strand, 5782080 - 5781902
Alignment:
Q  151 gatgaagtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatg 250  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||||||||  |||||||||||||||    || || |||||||||   || || || ||||    
T  5782080 gatgacgtgcattctgagagagaggagcagttgcatcagacatcgcggaaggagttggagaaccacacggtggatgatgttactgttacactttctgatg 5781981  T
Q  251 atgtggaacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgtaccacattcatc 329  Q
    |||||||||| |||||||||  ||| | ||| |||||||||||||| |||||| ||||||||| |||| ||| ||||||    
T  5781980 atgtggaacacaatcattcgatcccgcgggagctggtggagagtcccaagggttcccatgagcgtgtatcacgttcatc 5781902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 43 - 329
Target Start/End: Complemental strand, 19069709 - 19069420
Alignment:
Q  43 ttgtcgtcaacatctttcagctttccactgcataacgtgtttgacaacatttctagtgaggagctgttactagctacgccagtgtttgaaattgtttccc 142  Q
    ||||||||||  ||||||||||||||| | || || | ||||||||| ||||||  | ||||||||  ||  |||||||||||||| ||  || ||||||    
T  19069709 ttgtcgtcaaactctttcagctttccattacacaatgcgtttgacaaaatttctcctaaggagctgccacgtgctacgccagtgttagaggttatttccc 19069610  T
Q  143 g-gttgc--atgatgaagtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaac 239  Q
      |||||  | ||||| |||||||||||||||| ||||| || ||||| ||||||||| | ||||||||||||||     || || |||||||||   ||    
T  19069609 ctgttgcgcacgatgacgtgcattctgagagagaggagcggttgcatcagacatcgcgagaggagttggagaaccccacggtggaagatgttactgttac 19069510  T
Q  240 gctctcggatgatgtggaacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgtaccacattcatc 329  Q
     || ||  ||||||||||||| |||||||||  ||| ||||| |||||||||||||| ||||||  |||||||| | || ||||||||||    
T  19069509 cctttctaatgatgtggaacacaatcattcgatcccgcaggagctggtggagagtcccaagggtttccatgagcgtatatcacattcatc 19069420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 17763963 - 17764060
Alignment:
Q  220 gttgacgatgttactccaacgctctcggatgatgtggaacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgt 317  Q
    ||||| ||||||||| | ||||| || ||||||||||||||||||||||   ||   | ||| |||||||||||||  |||||| |||||||||||||    
T  17763963 gttgatgatgttactgctacgctttctgatgatgtggaacataatcatttaagctggcgggagctggtggagagtctcaagggttcccatgagcatgt 17764060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 324
Target Start/End: Original strand, 16311632 - 16311799
Alignment:
Q  157 gtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtgg 256  Q
    ||||||| ||||| |||||| || | ||||| ||||||||||| || |||||||||||  || || || |||||  ||   ||||| || ||||||||||    
T  16311632 gtgcattttgagaaagtggaacaattgcatctgacatcgcgggaggtgttggagaaccccgtggtggatgatgtctctgttacgctttctgatgatgtgg 16311731  T
Q  257 aacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgtaccacat 324  Q
    || |||||| ||||||||||| ||| |||||||||||||| |||||| || | |||| |||| |||||    
T  16311732 aatataatcgttcgcgcccacgggagctggtggagagtcccaagggttcctacgagcgtgtatcacat 16311799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 324
Target Start/End: Original strand, 18488416 - 18488583
Alignment:
Q  157 gtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtgg 256  Q
    ||||||| ||||| |||||| || | ||||| ||||||||||| || |||||||||||  || || || |||||  ||   ||||| || ||||||||||    
T  18488416 gtgcattttgagaaagtggaacaattgcatctgacatcgcgggaggtgttggagaaccccgtggtggatgatgtctctgttacgctttctgatgatgtgg 18488515  T
Q  257 aacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgtaccacat 324  Q
    || |||||| ||||||||||| ||| |||||||||||||| |||||| || | |||| |||| |||||    
T  18488516 aatataatcgttcgcgcccacgggagctggtggagagtcccaagggttcctacgagcgtgtatcacat 18488583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 324
Target Start/End: Original strand, 18492626 - 18492793
Alignment:
Q  157 gtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtgg 256  Q
    ||||||| ||||| |||||| || | ||||| ||||||||||| || |||||||||||  || || || |||||  ||   ||||| || ||||||||||    
T  18492626 gtgcattttgagaaagtggaacaattgcatctgacatcgcgggaggtgttggagaaccccgtggtggatgatgtctctgttacgctttctgatgatgtgg 18492725  T
Q  257 aacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagcatgtaccacat 324  Q
    || |||||| ||||||||||| ||| |||||||||||||| |||||| || | |||| |||| |||||    
T  18492726 aatataatcgttcgcgcccacgggagctggtggagagtcccaagggttcctacgagcgtgtatcacat 18492793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 309
Target Start/End: Complemental strand, 19829181 - 19829018
Alignment:
Q  146 tgcatgatgaagtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctc 245  Q
    |||| ||||| |||||||||||||||| ||||| || ||| | |||||| | |||||||||||||||||    |||  |||||||||||   || || ||    
T  19829181 tgcacgatgacgtgcattctgagagagaggagcggttgcaccagacatcacagggggagttggagaaccccacagtgaacgatgttactgttacactttc 19829082  T
Q  246 ggatgatgtggaacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccat 309  Q
     |||||||||||||| |||||||||  ||| | ||| |||||||||||||| |||||| |||||    
T  19829081 tgatgatgtggaacacaatcattcgaacccgcgggagctggtggagagtcccaagggttcccat 19829018  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 295
Target Start/End: Original strand, 16314023 - 16314161
Alignment:
Q  157 gtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtgg 256  Q
    ||||||| ||||| |||||| || | ||||| |||||| |||| || |||||||||||  || || || |||||  ||   ||||| || ||||||||||    
T  16314023 gtgcattttgagaaagtggaacaattgcatctgacatcacgggaggtgttggagaaccccgtggtggatgatgtctctgttacgctttctgatgatgtgg 16314122  T
Q  257 aacataatcattcgcgcccacaggatctggtggagagtc 295  Q
    || |||||| ||||||||||| ||| |||||||||||||    
T  16314123 aatataatcgttcgcgcccacgggagctggtggagagtc 16314161  T

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Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 295
Target Start/End: Original strand, 18495017 - 18495155
Alignment:
Q  157 gtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtgg 256  Q
    ||||||| ||||| |||||| || | ||||| |||||| |||| || |||||||||||  || || || |||||  ||   ||||| || ||||||||||    
T  18495017 gtgcattttgagaaagtggaacaattgcatctgacatcacgggaggtgttggagaaccccgtggtggatgatgtctctgttacgctttctgatgatgtgg 18495116  T
Q  257 aacataatcattcgcgcccacaggatctggtggagagtc 295  Q
    || |||||| ||||||||||| ||| |||||||||||||    
T  18495117 aatataatcgttcgcgcccacgggagctggtggagagtc 18495155  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 313
Target Start/End: Original strand, 17459431 - 17459587
Alignment:
Q  157 gtgcattctgagagagtggagcagtcgcatccgacatcgcggggggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtgg 256  Q
    |||||||| |||||||  ||||| | |||||||||||||||||   ||||||||||||   |||| |||||||| |||   ||||| ||  |||||||||    
T  17459431 gtgcattccgagagagcagagcaattgcatccgacatcgcgggaaaagttggagaaccccatagtggacgatgtcactgttacgctttctaatgatgtgg 17459530  T
Q  257 aacataatcattcgcgcccacaggatctggtggagagtccgaagggtgcccatgagc 313  Q
    |||| ||||||||| |||| | |||  ||||||||||||  || ||| |||||||||    
T  17459531 aacacaatcattcgagcccgcgggagatggtggagagtctcaacggtccccatgagc 17459587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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