View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17231_low_3 (Length: 440)
Name: NF17231_low_3
Description: NF17231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17231_low_3 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0240 (1 HSPs) |
| | |
|
| [»] scaffold0018 (1 HSPs) |
| | |
|
| [»] scaffold0013 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-125; HSPs: 23)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 188 - 423
Target Start/End: Complemental strand, 37426067 - 37425832
Alignment:
| Q |
188 |
gatatttattttttaacttgtttttgtgtcggccattaagactgtgtttacaaatactcctttgagaagctggtgcagttatattgcaggtctacaacaa |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37426067 |
gatatttattttttaacttgtttttgtgtcggccattaagactgtgtttacaaatactcctttgagaagctggtgcagttatattgcaggtctacaacaa |
37425968 |
T |
|
| Q |
288 |
cattgatttgcaacacacttgctgcctctaaaatagcgattatctttacaataaacatcacaaaattcattatctggacatggatattggccaagacaat |
387 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37425967 |
cattgatttgcaacacacttgccgcctctaaaataacgattatctttacaataaacatcacaaaattcattatctggacatggatattggccaagacaat |
37425868 |
T |
|
| Q |
388 |
taggaaaaggacttttgtcaaatgctgaagcagttg |
423 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
37425867 |
taggaaaaggacttttgtcaaatgctgaagcagttg |
37425832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37426252 - 37426166
Alignment:
| Q |
1 |
gattaggaatgaaattggtgtgcaatacannnnnnnagatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagc |
87 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37426252 |
gattaggaatgaaattggtttgcaatacatttttttagatggaatttgttatgttaaacaattgcaaacctaataaagtaaatgagc |
37426166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 27853676 - 27853728
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
27853676 |
agatggaatttgttaggttaaataattgcaaacctaataaagtaaatgagcgg |
27853728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 39922094 - 39922146
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
39922094 |
agatggaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgg |
39922146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 37409784 - 37409848
Alignment:
| Q |
190 |
tatttattttttaacttgtttttgtgtcggccattaagactgtgtttacaaatactcctttgagaa |
255 |
Q |
| |
|
||||||||||||||||| |||||||||| | || ||||| |||||||||||||||| ||||||||| |
|
|
| T |
37409784 |
tatttattttttaacttatttttgtgtcagtca-taagattgtgtttacaaatacttctttgagaa |
37409848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 23828133 - 23828185
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
23828133 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
23828185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 35617782 - 35617730
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||| |||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
35617782 |
agatagaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgg |
35617730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 40399500 - 40399552
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
40399500 |
agatggaatttgttaggttaaataattacaaacctaataaaacaaatgagcgg |
40399552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 37410078 - 37410162
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaa |
121 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
37410078 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaagttaaattgctgcaaacgtaa |
37410162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 23830951 - 23831003
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
23830951 |
agatgcaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
23831003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 32062917 - 32062865
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
32062917 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
32062865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 37197912 - 37197952
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
37197912 |
agatggaatttgttaggttaaataattgcaaacctaataaa |
37197952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 37198304 - 37198356
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||| |||||| |||||||||| |
|
|
| T |
37198304 |
agatggaatttgttaggttaaacaattgaaaaccgaataaagcaaatgagcgg |
37198356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 38111444 - 38111392
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
38111444 |
agatggaatttgttgggttaaataattgcaaacctaataaagcaaatgagcgg |
38111392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 13797537 - 13797492
Alignment:
| Q |
42 |
gaatttgttatgttaaacaattgcaaacctaataaaataaatgagc |
87 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||| |||||||| |
|
|
| T |
13797537 |
gaatttgttaagttaaataattgcaaacctaataaagcaaatgagc |
13797492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 23085960 - 23085911
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
23085960 |
agatggaatttattaggttaaataattgcaaacctaataaagcaaatgag |
23085911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 23960806 - 23960855
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||||||||||| ||||||| |
|
|
| T |
23960806 |
agatggaatttgttaggttaaataattacaaacctaataaagcaaatgag |
23960855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 3459141 - 3459193
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||||||| |||||||||| |
|
|
| T |
3459141 |
agatgaaatttgttagattaaataattgcaaacctaataaagcaaatgagcgg |
3459193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 3990245 - 3990193
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||| ||| |||||| |||||||||||||| |||||||||||||| |
|
|
| T |
3990245 |
agatgtaatttattaggttaaataattgcaaacctaaacaaataaatgagcgg |
3990193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 29580044 - 29580096
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||| ||||| ||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
29580044 |
agatgaaatgtgttagtttaaataattgcaaacctaataaaacaaatgagcgg |
29580096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 30439048 - 30439088
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
30439048 |
agatgaaatttgttaggttaaataattgcaaacctaataaa |
30439088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 34947576 - 34947524
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||| ||||||||||||| |||||||||| |
|
|
| T |
34947576 |
agatgaaatttgttaggttaaataatttcaaacctaataaagcaaatgagcgg |
34947524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 37198119 - 37198171
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||| |||||| ||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
37198119 |
agatagaatttattaggttaaataattgcaaacctaataaagcaaatgagcgg |
37198171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 31)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 23952786 - 23952871
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
23952786 |
agatggaatttgttaagttaaataattgcaaacctaataaaacaaatgagcggaaaaaaattaggttaaattgctgcagacgtaac |
23952871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 29967279 - 29967194
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||| | ||||||||| ||||||||| |||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
29967279 |
agatggaatttgttaggttatataattgcaaatctaataaaacaaatgagcgggaaaaaattaggttaagttgctgcaaacctaac |
29967194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 12796126 - 12796178
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
12796126 |
agatggaatttgttagattaaataattgcaaacctaataaaacaaatgagcgg |
12796178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 36639272 - 36639187
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||| |
|
|
| T |
36639272 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctacaaacgtaac |
36639187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 44500772 - 44500720
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
44500772 |
agatggaatttgttacgttaaataattgcaaacctaataaagcaaatgagcgg |
44500720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 48076290 - 48076238
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
48076290 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
48076238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 48076468 - 48076383
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
48076468 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggggaaaaattaggttaaattgctgcagacgtaac |
48076383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 48076645 - 48076560
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| ||||| |||||||||||| |||| ||||| ||||||||| |||||||||||||||| |
|
|
| T |
48076645 |
agatggaatttgttaggttaaataattgtaaacctaataaagcaaattagcggaaaaaaattaggttaaattgctgcaaacgtaac |
48076560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 28379981 - 28380028
Alignment:
| Q |
40 |
tggaatttgttatgttaaacaattgcaaacctaataaaataaatgagc |
87 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||| |||||||| |
|
|
| T |
28379981 |
tggaatttgttaggttaaataattgcaaacctaataaaacaaatgagc |
28380028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 43161933 - 43161982
Alignment:
| Q |
39 |
atggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcg |
88 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
43161933 |
atggaatttgttaagttaaataattgcaaacctaataaagcaaatgagcg |
43161982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 4941778 - 4941726
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
4941778 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
4941726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 8079395 - 8079355
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
8079395 |
agatggaatttgttaggttaaataattgcaaacctaataaa |
8079355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 22292791 - 22292739
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||| |||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
22292791 |
agatggtatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
22292739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 28389777 - 28389829
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| || ||||||||||||||| |||||||||| |
|
|
| T |
28389777 |
agatggaatttgttaggttaaataaatgcaaacctaataaagcaaatgagcgg |
28389829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 47769052 - 47768967
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||| || |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
47769052 |
agatgaaatttgttaggttaaataattgcaaacctaatgaagcaaatgagcggaaaaaaattaggttaaattgctgcagacgtaac |
47768967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 8118481 - 8118430
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcg |
88 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
8118481 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcg |
8118430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 21581282 - 21581333
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcg |
88 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
21581282 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcg |
21581333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 22292993 - 22292946
Alignment:
| Q |
42 |
gaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
22292993 |
gaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
22292946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 2481657 - 2481739
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||| |||| ||||||| |
|
|
| T |
2481657 |
agatggaatttgttaggttaaa---ttgcaaacctaataaagcaaatgagcgggaaaaaattaggttaagttgttgcagacgtaac |
2481739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 8397748 - 8397798
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagc |
87 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||| ||| |||| |
|
|
| T |
8397748 |
agatgaaatttgttaagttaaataattgcaaacctaataaaacaaacgagc |
8397798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 23952512 - 23952595
Alignment:
| Q |
39 |
atggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||| ||| |||||| |||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
23952512 |
atggaattttttaggttaaataattgcaaacctaataaagcaaatgagcgtgaaaaaattaggttaaattgctgcagacgtaac |
23952595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 21585562 - 21585611
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
21585562 |
agatgaaatttgttaagttaaataattgcaaacctaataaagcaaatgag |
21585611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 2177364 - 2177312
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||||||| |||||||||| |
|
|
| T |
2177364 |
agatgaaatttgttaggttaagtaattgcaaacctaataaagcaaatgagcgg |
2177312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 8079119 - 8079067
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| ||||||| | ||| ||||||||| || |||||||||| |
|
|
| T |
8079119 |
agatggaatttgttaggttaaactactgctaacctaatacaacaaatgagcgg |
8079067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 24049665 - 24049613
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| |||| |||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
24049665 |
agatgaaattcgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
24049613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 28379768 - 28379819
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||||||| |||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
28379768 |
agatggaatt-gttaggttaaataattgcaaacctaataaagcaaatgagcgg |
28379819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 36639445 - 36639360
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| |||||||| ||||||||| |||||| ||| ||||||||| ||||||||||| |||| |
|
|
| T |
36639445 |
agatgaaatttgttaggttaaataattgcaatcctaataaagaaaatgaacgggaaaaaattaggttaaattgctgcaaacctaac |
36639360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 43161746 - 43161798
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||| |||||||||| |
|
|
| T |
43161746 |
agatgaaatttgttaggttaaataattgcaaacctaataatgcaaatgagcgg |
43161798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 52689624 - 52689676
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||| ||||||||||||| |||||||||| |
|
|
| T |
52689624 |
agatgaaatttgttaggttaaataattacaaacctaataaagcaaatgagcgg |
52689676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 53144851 - 53144903
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||| ||||||||||||| |||||||||| |
|
|
| T |
53144851 |
agatgaaatttgttaggttaaataattacaaacctaataaagcaaatgagcgg |
53144903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 54653655 - 54653707
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||| |||||||||| |||||| || ||||||||||||||| |||||||||| |
|
|
| T |
54653655 |
agattgaatttgttaggttaaataactgcaaacctaataaagcaaatgagcgg |
54653707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 35)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 4680901 - 4680986
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
4680901 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgcagacgtaac |
4680986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 11646404 - 11646487
Alignment:
| Q |
39 |
atggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||| |||||||||| |||| ||||||||||||| ||||||| |
|
|
| T |
11646404 |
atggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattagattaagttgctgcagacgtaac |
11646487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 11650013 - 11650065
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
11650013 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
11650065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 16671705 - 16671653
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
16671705 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
16671653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 17646073 - 17646021
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
17646073 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
17646021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 18486734 - 18486649
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
18486734 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgcaaacctaac |
18486649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 23591419 - 23591471
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
23591419 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
23591471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 2354670 - 2354720
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagc |
87 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||||||| |||||||| |
|
|
| T |
2354670 |
agatggaatttgttatattaaataattgcaaacctaataaagcaaatgagc |
2354720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 27716314 - 27716363
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
27716314 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgag |
27716363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 2853222 - 2853270
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatga |
85 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||| |||||| |
|
|
| T |
2853222 |
agatgaaatttgttaggttaaataattgcaaacctaataaaacaaatga |
2853270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 12140866 - 12140951
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
12140866 |
agatgaaatttgttaggttaaataattgcaaacctaataacgcaaatgagcggaaaaaaattaggttaaattgctgcagacgtaac |
12140951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 18487251 - 18487199
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
18487251 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
18487199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 23591636 - 23591676
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
23591636 |
agatggaatttgttaggttaaataattgcaaacctaataaa |
23591676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 27716536 - 27716588
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||||| |||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
27716536 |
agatggaagttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
27716588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 30991560 - 30991508
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| ||||||| |||||||||| |
|
|
| T |
30991560 |
agatggaatttgttaggttaaataattgcaaacataataaagcaaatgagcgg |
30991508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 34837541 - 34837489
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| || ||| |||||||||||||||||| ||||||||||| |
|
|
| T |
34837541 |
agatgaaatttgttaggtaaaataattgcaaacctaataaagtaaatgagcgg |
34837489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 45419847 - 45419899
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||||||||||| |||||||||| |
|
|
| T |
45419847 |
agatggaatttgttaggttaaataattacaaacctaataaagcaaatgagcgg |
45419899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 48640806 - 48640858
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
48640806 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
48640858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 32278158 - 32278226
Alignment:
| Q |
54 |
ttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
32278158 |
ttaaataattgcaaacctaataaagtaaatgagcgggaaaaaattaggttaaattgctgcagacgtaac |
32278226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 43059291 - 43059240
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcg |
88 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
43059291 |
agatggaatttgttagattaaataattgcaaacctaataaagcaaatgagcg |
43059240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 9141966 - 9142016
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagc |
87 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||| |
|
|
| T |
9141966 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagc |
9142016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 11645942 - 11646021
Alignment:
| Q |
43 |
aatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||| |||||| |||| ||||||||||||| |||||||||| ||||||||||||| |||| ||||||| |
|
|
| T |
11645942 |
aatttgttaggttaaataattacaaacctaataaagcaaatgagcgggaaaaaattaggttaagttgttgcagacgtaac |
11646021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 45419641 - 45419691
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagc |
87 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||| |
|
|
| T |
45419641 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagc |
45419691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 46264288 - 46264337
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
|||| |||||||||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
46264288 |
agatagaatttgttaggttaaataattgcaaacctaataaagcaaatgag |
46264337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 1566513 - 1566553
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
1566513 |
agatgaaatttgttaggttaaataattgcaaacctaataaa |
1566553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 2526958 - 2527010
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| |||| |||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
2526958 |
agatgtaattagttaggttaaataattgcaaacctaataaagcaaatgagcgg |
2527010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 4681150 - 4681202
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||| ||||||| |||||||||| |
|
|
| T |
4681150 |
agatggaatttattaggttaaataattgcaaacataataaagcaaatgagcgg |
4681202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 4681603 - 4681643
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
4681603 |
agatgaaatttgttaagttaaataattgcaaacctaataaa |
4681643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 11646218 - 11646291
Alignment:
| Q |
41 |
ggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgca |
114 |
Q |
| |
|
||||||||||| |||||| |||||||||||||| ||| ||||||| || |||||||||||||||||| |
|
|
| T |
11646218 |
ggaatttgttaggttaaataattgcaaacctaacaaagcaaatgagtggaaaaaaattaggttaagttgctgca |
11646291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 16671346 - 16671294
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||| | |||||||||| |
|
|
| T |
16671346 |
agatgaaatttgttaggttaaataattgcaaacctaatagagcaaatgagcgg |
16671294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 17645714 - 17645662
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||| | |||||||||| |
|
|
| T |
17645714 |
agatgaaatttgttaggttaaataattgcaaacctaatagagcaaatgagcgg |
17645662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 19222206 - 19222166
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| ||||| |||||||||||| |
|
|
| T |
19222206 |
agatggaatttgttaggttaaataattgtaaacctaataaa |
19222166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 34837288 - 34837248
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| ||||| |||||||||||| |
|
|
| T |
34837288 |
agatggaatttgttaggttaaataattgtaaacctaataaa |
34837248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 35124821 - 35124785
Alignment:
| Q |
41 |
ggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
35124821 |
ggaatttgttaggttaaataattgcaaacctaataaa |
35124785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 40686897 - 40686937
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
40686897 |
agatgtaatttgttaggttaaataattgcaaacctaataaa |
40686937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 36643133 - 36643218
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
36643133 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattgctgcatacgtaac |
36643218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 837209 - 837261
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
837209 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
837261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 851032 - 850980
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
851032 |
agatgaaatttgttaacttaaataattgcaaacctaataaaataaatgagcgg |
850980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 11454663 - 11454578
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
11454663 |
agatggaatttgttaggttaaatgattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgcagacgtaac |
11454578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 11522632 - 11522584
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatga |
85 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||||||||| |||||| |
|
|
| T |
11522632 |
agatgaaatttgttaggttaaacaattgtaaacctaataaaacaaatga |
11522584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 18095056 - 18095004
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||| |||||||||| |
|
|
| T |
18095056 |
agatggaatttgttaggttaaatcattgcaaacctaataaagcaaatgagcgg |
18095004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 38887588 - 38887636
Alignment:
| Q |
41 |
ggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
38887588 |
ggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
38887636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 46451570 - 46451530
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
46451570 |
agatggaatttgttaggttaaataattgcaaacctaataaa |
46451530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 47503059 - 47503144
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
47503059 |
agatgaaatttgttaggttaaataattgcaaacctaataatgcaaatgagcgggaaaaaattaggttaaattgctgcagacgtaac |
47503144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 47503232 - 47503284
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
47503232 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
47503284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 37760596 - 37760545
Alignment:
| Q |
38 |
gatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
37760596 |
gatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
37760545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 38887806 - 38887853
Alignment:
| Q |
42 |
gaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
38887806 |
gaatttgttacgttaaataattgcaaacctaataaagcaaatgagcgg |
38887853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 38887377 - 38887423
Alignment:
| Q |
43 |
aatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
38887377 |
aatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
38887423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 51654138 - 51654092
Alignment:
| Q |
43 |
aatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||| |||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
51654138 |
aatttgttaggttaaataattgtaaacctaataaaacaaatgagcgg |
51654092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 11454038 - 11453998
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
11454038 |
agatgtaatttgttaggttaaataattgcaaacctaataaa |
11453998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 11454305 - 11454253
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||| |||||| || |||||||| |
|
|
| T |
11454305 |
agatgaaatttgttaggttaaataattgcaaaccaaataaagtagatgagcgg |
11454253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 24365834 - 24365782
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| |||| |||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
24365834 |
agatgaaattcgttaggttaaataattgcaaacctaataaatcaaatgagcgg |
24365782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 35560201 - 35560153
Alignment:
| Q |
38 |
gatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
|||| ||||||||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
35560201 |
gatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgag |
35560153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 25)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 6537661 - 6537713
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
6537661 |
agatggaatttgttaggttaaataattgcaaacctaataaagtaaatgagcgg |
6537713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 51114006 - 51113921
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| ||||||| ||| ||||||||| |||||||| ||||||| |
|
|
| T |
51114006 |
agatggaatttgttaggttaaataattgcaaacctaataaagtaaatgaacgggaaaaaattaggttaaattgctgcagacgtaac |
51113921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 318655 - 318603
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
318655 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
318603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 1156071 - 1156123
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
1156071 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
1156123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 38684115 - 38684030
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||||| |||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
38684115 |
agatggaatttgttaggttaaataatcgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattgctgcaaacctaac |
38684030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 42496939 - 42496991
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| ||||||||| ||||||||| |||||||||| |
|
|
| T |
42496939 |
agatggaatttgttaggttaaataattgcaaatctaataaaacaaatgagcgg |
42496991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 51113823 - 51113738
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
51113823 |
agatgaaatttgttaggttaaataattgcaaatctaataaagcaaatgagcggaaaaaaattaggttaaattgctgcaaacgtaac |
51113738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 51114190 - 51114138
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
51114190 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
51114138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 3227229 - 3227280
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcg |
88 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
3227229 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcg |
3227280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 42492171 - 42492220
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
42492171 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgag |
42492220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 42497480 - 42497525
Alignment:
| Q |
43 |
aatttgttatgttaaacaattgcaaacctaataaaataaatgagcg |
88 |
Q |
| |
|
||||||||| |||||| |||| |||||||||||||||||||||||| |
|
|
| T |
42497480 |
aatttgttaagttaaataattacaaacctaataaaataaatgagcg |
42497525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 5428628 - 5428576
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
5428628 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
5428576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 5429152 - 5429112
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
5429152 |
agatggaatttgttaggttaaataattgcaaacctaataaa |
5429112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 21617856 - 21617804
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
21617856 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
21617804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 42497297 - 42497349
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
42497297 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
42497349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 44263189 - 44263149
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
44263189 |
agatggaatttgttaggttaaataattgcaaacctaataaa |
44263149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 27296437 - 27296386
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcg |
88 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
27296437 |
agatgaaatttgttaggttaaataattgcaaacctaataaagaaaatgagcg |
27296386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 33375721 - 33375678
Alignment:
| Q |
46 |
ttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||| |||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
33375721 |
ttgttaggttaaataattgcaaacctaataaagtaaatgagcgg |
33375678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 44262764 - 44262715
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| ||||||| ||||||| |
|
|
| T |
44262764 |
agatggaatttgttaggttaaataattgcaaacgtaataaagcaaatgag |
44262715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 51272499 - 51272548
Alignment:
| Q |
38 |
gatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagc |
87 |
Q |
| |
|
|||||||||| ||| |||||| |||||||||||||||||| |||||||| |
|
|
| T |
51272499 |
gatggaatttattaggttaaataattgcaaacctaataaagcaaatgagc |
51272548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 5429033 - 5428993
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
5429033 |
agatggaatttgttagcttaaataattgcaaacctaataaa |
5428993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 16165692 - 16165732
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
16165692 |
agatgaaatttgttaggttaaataattgcaaacctaataaa |
16165732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 27296262 - 27296222
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||||||||||| |
|
|
| T |
27296262 |
agatggaatttattaggttaaataattgcaaacctaataaa |
27296222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 42497117 - 42497157
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
42497117 |
agatggaatttattatgttaaataattgtaaacctaataaa |
42497157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 52740800 - 52740748
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||| |||||||||| |||||| ||||| |||||||||||| |||||||||| |
|
|
| T |
52740800 |
agattgaatttgttaagttaaataattgtaaacctaataaagcaaatgagcgg |
52740748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 12399 - 12476
Alignment:
| Q |
45 |
tttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
12399 |
tttgttaggttaaataattgcaaacctaataaaacaaatgagcggaaaaaaattaggttaaattgctgcaaacctaac |
12476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 9829019 - 9828967
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
9829019 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
9828967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 17201697 - 17201645
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
17201697 |
agatgaaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgg |
17201645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 25068289 - 25068203
Alignment:
| Q |
37 |
agatggaattt-gttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||| |||| |||||| |||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
25068289 |
agatggaattttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattgctgcagacgtaac |
25068203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 4811068 - 4811153
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
|||||||||| |||| |||||| |||||||||||||||||| ||| |||||| ||||||||| |||||||| ||||||| |
|
|
| T |
4811068 |
agatggaattagttaggttaaataattgcaaacctaataaagcaaacgagcgggaaaaaattaggttaaattgctgcagacgtaac |
4811153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 17906806 - 17906891
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||||||||||| |||||||| | ||||||||| ||||||||||| |||| |
|
|
| T |
17906806 |
agatggaatttgttaggttaaataattacaaacctaataaagcaaatgagctggaaaaaattaggttaaattgctgcaaacctaac |
17906891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 25068062 - 25068010
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
25068062 |
agatgtaatttgttatgttaaataattgcaaaccttataaagcaaatgagcgg |
25068010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 17202731 - 17202680
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcg |
88 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
17202731 |
agatggaatttgttagattaaataattgcaaacctaataaagcaaatgagcg |
17202680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 27579698 - 27579649
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
|||| |||||||||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
27579698 |
agattgaatttgttaggttaaataattgcaaacctaataaagcaaatgag |
27579649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 32208413 - 32208466
Alignment:
| Q |
37 |
agatggaatttgttatgttaaac-aattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
32208413 |
agatggaatttgttaggttaaaataattgcaaacctaataaagcaaatgagcgg |
32208466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 15131032 - 15130959
Alignment:
| Q |
4 |
taggaatgaaattggtgtgcaatacannnnnnnagatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
|||||||||||||| |||||||| || ||| ||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
15131032 |
taggaatgaaattgatgtgcaatgcatttttttagagggaatttgttaggttaaataattgcaaatctaataaa |
15130959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 17202950 - 17202910
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
17202950 |
agatggaatttgttaggttaaataattgcaaatctaataaa |
17202910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 23610532 - 23610481
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| ||||| |||||||||||| |||||||||| |
|
|
| T |
23610532 |
agatggaatttgttaggttaaataattg-aaacctaataaagcaaatgagcgg |
23610481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 26832522 - 26832562
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
26832522 |
agatgtaatttgttaagttaaataattgcaaacctaataaa |
26832562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 27315386 - 27315346
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
|||| |||||||||| |||||| |||||||||||||||||| |
|
|
| T |
27315386 |
agattgaatttgttaggttaaataattgcaaacctaataaa |
27315346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 24350924 - 24350976
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
24350924 |
agatgaaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgg |
24350976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 24351477 - 24351529
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
24351477 |
agatgaaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgg |
24351529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 43394959 - 43395044
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
43394959 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcaggaaaaaattaggttaaattgctgcaaacgtaac |
43395044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 19122007 - 19121958
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
19122007 |
agatagaatttgttaggttaaacaattgcaaacctaataaagcaaatgag |
19121958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 19122343 - 19122294
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
19122343 |
agatagaatttgttaggttaaacaattgcaaacctaataaagcaaatgag |
19122294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 7673224 - 7673272
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatga |
85 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||| |||||| |
|
|
| T |
7673224 |
agatgaaatttgttaggttaaataattgcaaacctaataaaacaaatga |
7673272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 11313740 - 11313688
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||| |||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
11313740 |
agatagaatttgttaggttaaataattgcaaacctaataaagaaaatgagcgg |
11313688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 11313902 - 11313862
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
11313902 |
agatggaatttgttaggttaaataattgcaaacctaataaa |
11313862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 11314080 - 11314028
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
11314080 |
agatggaattttttaggttaaataattgcaaacctaataaagcaaatgagcgg |
11314028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 16528700 - 16528648
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||| |||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
16528700 |
agatagaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
16528648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 16529235 - 16529150
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
||||||||||||||| |||||| ||||||||| |||||||| ||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
16529235 |
agatggaatttgttacgttaaataattgcaaatctaataaagcaaatgagcgcgaaaaaattaggttaaattgctgcagacgtaac |
16529150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 16526296 - 16526249
Alignment:
| Q |
39 |
atggaatttgttatgttaaacaattgcaaacctaataaaataaatgag |
86 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
16526296 |
atggaatttgttaggttaaataattgcaaacctaataaagcaaatgag |
16526249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 23138162 - 23138079
Alignment:
| Q |
6 |
ggaatgaaattggtgtgcaatacannnnnnnagatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||||||||||||||| || || |||||||| |||||| |||| | |||||||||||||||||| |||||||||| |
|
|
| T |
23138162 |
ggaatgaaattggtgtgcgatgcatttttttagatggaacttgttacgttatataattgcaaacctaataaagcaaatgagcgg |
23138079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 35159797 - 35159751
Alignment:
| Q |
43 |
aatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
35159797 |
aatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
35159751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 12442158 - 12442210
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||| |||||||||| |
|
|
| T |
12442158 |
agatgtaatttgttaggttaaataattgcaaacctaataaggcaaatgagcgg |
12442210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 16305446 - 16305394
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||| ||| ||||| |||||||||||||||||| |||||||||| |
|
|
| T |
16305446 |
agatggaatttattagattaaataattgcaaacctaataaagcaaatgagcgg |
16305394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 16528881 - 16528796
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
|||||||| |||||| |||||| | ||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
16528881 |
agatggaagttgttaggttaaatatttgcaaacctaataaggcaaatgagcgggaaaaaattaggttaaattgctgcagacgtaac |
16528796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 26523165 - 26523217
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| | ||| |||||||||||||||||| |||||||||| |
|
|
| T |
26523165 |
agatggaatttgttagatcaaataattgcaaacctaataaagcaaatgagcgg |
26523217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 35159517 - 35159477
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
|||||||||| |||| |||||| |||||||||||||||||| |
|
|
| T |
35159517 |
agatggaattggttaggttaaataattgcaaacctaataaa |
35159477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 28612239 - 28612291
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
28612239 |
agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
28612291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 5001705 - 5001757
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
5001705 |
agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgg |
5001757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 12898123 - 12898071
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||| ||||||||||| |
|
|
| T |
12898123 |
agatggaatttgttagattaaataattgcaaacctaacaaagtaaatgagcgg |
12898071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 19640407 - 19640359
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatga |
85 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||| |||||||||||||| |
|
|
| T |
19640407 |
agatggaatttattaggttaaataattgcaaacccaataaaataaatga |
19640359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 19839000 - 19838952
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatga |
85 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||| |||||||||||||| |
|
|
| T |
19839000 |
agatggaatttattaggttaaataattgcaaacccaataaaataaatga |
19838952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 41995759 - 41995799
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
41995759 |
agatggaatttgttaggttaaataattgcaaacctaataaa |
41995799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 627628 - 627552
Alignment:
| Q |
46 |
ttgttatgttaaacaattgcaaacctaataaaataaatgagcggnnnnnnnttaggttaagttgctgcaaacgtaac |
122 |
Q |
| |
|
|||||| |||||| ||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
627628 |
ttgttaggttaaataattgcaaatgtaataaagtaaatgagcgggaaaaaattaggttaaattgctgcaaacgtaac |
627552 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 12896434 - 12896484
Alignment:
| Q |
39 |
atggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||| ||| ||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
12896434 |
atggaatttattagattaaataattgcaaacctaataaaacaaatgagcgg |
12896484 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 28611814 - 28611866
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
|||||||| |||||| |||||| ||||||||||||||| || |||||||||| |
|
|
| T |
28611814 |
agatggaacttgttaggttaaataattgcaaacctaatcaagcaaatgagcgg |
28611866 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 28612663 - 28612703
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaa |
77 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
28612663 |
agatgaaatttgttaggttaaataattgcaaacctaataaa |
28612703 |
T |
|
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Target: scaffold0240 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0240
Description:
Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 13192 - 13140
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||||| |||||||||| |
|
|
| T |
13192 |
agatggaatttgttaggttaaataatggcaaacctaataaaccaaatgagcgg |
13140 |
T |
|
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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 163808 - 163860
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
163808 |
agatggaatttattaggttaaataattgcaaacctaataaagcaaatgagcgg |
163860 |
T |
|
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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 102803 - 102751
Alignment:
| Q |
37 |
agatggaatttgttatgttaaacaattgcaaacctaataaaataaatgagcgg |
89 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| ||||||| |||||||||| |
|
|
| T |
102803 |
agatggaatttgttaggttaaataattgcaaacttaataaagcaaatgagcgg |
102751 |
T |
|
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