View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17232_high_10 (Length: 258)
Name: NF17232_high_10
Description: NF17232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17232_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4824850 - 4825090
Alignment:
| Q |
1 |
cattgtcatcatgcatgtttcttctcttgagtggatagctttcctctaactgtagtggttttgtgtcatatcttcactgatgtagaaagcattttctann |
100 |
Q |
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| T |
4824850 |
cattgtcatcatgcatgtttcttctcttgagtggatagctttcctctaactgtagtggttttgtgtcatatcttcactgatgtagaaagcattttctatt |
4824949 |
T |
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| Q |
101 |
nnnnn-gtccatcaagagacctcacgtgactgcgttcatcgtcatattagtttcctaacggaacccatttttcaatcccatggtgaggaaataacctaag |
199 |
Q |
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| T |
4824950 |
ttttttgtccatcaagagacctcacgtgactgcgttcatcgtcatattagtttcctaacggaacccatttttcaatcccatggtgaggaaataacctaag |
4825049 |
T |
|
| Q |
200 |
cattttcttgaaacacttccaaattccaattctcacgtaat |
240 |
Q |
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| T |
4825050 |
cattttcttgaaacacttccaaattccaattctcacgtaat |
4825090 |
T |
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